Pregenerated sensors for LCN6 (Homo sapiens)
Ensembl gene IDs: ENSG00000267206Ensembl transcript IDs: ENST00000341206.9, ENST00000471509.5, ENST00000476567.1, ENST00000480347.1, ENST00000494091.5, ENST00000497749.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTCTGAGCTGGTGCTGGGCCCCGGGAGCCGCTGAGCGAGGTGGGTaGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTAC | + |
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Preference number: 1 (lower is better) Translates to: ILSWCWAPGAAERGG*TLAEVTGPCGRHPY Trigger: GTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCCCAGCACCAGCTCAGAAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| 3UTR GCA 90 bp | CCCAGGCCTGACTTTGGGCAGGGGCAGGTGAAGACCCCCTCAGCCTaGCTGACTCCTTCAGGGCGACTGAGTCAGGCAGAAGCCAGAATC | + |
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Preference number: 1 (lower is better) Translates to: PRPDFGQGQVKTPSA*LTPSGRLSQAEARI Trigger: GATTCTGGCTTCTGCCTGACTCAGTCGCCCTGAAGGAGTCAGGCAGGCTGAGGGGGTCTTCACCTGCCCCTGCCCAAAGTCAGGCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCAGAGGGTCCTCCCACCCACTGTGCGTAGGGTGGCCTCCCCCACCCCCTGGCCCCGGGAGCCGCTaGGCGAGGTGGGTGGACACT | + |
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Preference number: 2 (lower is better) Translates to: LGRGSSHPLCVGWPPPPPGPGSR*ARWVDT Trigger: AGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCC...AGGGGGTGGGGGAGGCCACCCTACGCACAGTGGGTGGGAGGACCCTCTGCCCAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGAAGCCTCCCCCGAGGCTaGTCCGGTGGACACTCACGG | + |
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Preference number: 2 (lower is better) Translates to: GWTLAEVTGPCGRHPYWGSLPRG*SGGHSR Trigger: CCGTGAGTGTCCACCGGAGCAGCCTCGGGGGAGGCT...TCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGCCGAGGCTGCTCCGGTaGACACTCACGGTCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GGWTLAEVTGPCGRHPYWPRLLR*TLTVLL Trigger: CAGAAGGACCGTGAGTGTCCACCGGAGCAGCCTCGG...CCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR CAA 90 bp | ACCCTCAGCTGCCTTAGAGACAGTGGAGCCATGAACCCCGTGGGCTaGGGCAGAGGGTCCTCCCACCCACTGTGCGTAGGGTGGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TLSCLRDSGAMNPVG*GRGSSHPLCVGWPP Trigger: GGGAGGCCACCCTACGCACAGTGGGTGGGAGGACCCTCTGCCCAAGCCCACGGGGTTCATGGCTCCACTGTCTCTAAGGCAGCTGAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR-3UTR CCA 90 bp | GACTTTGGGCAGGGGCAGGTGAAGACCCCCTCAGCCTGCCTGACTCCTTCAGGGCCCCATCACGCCCTGTaGGCTCCAGAACTTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: DFGQGQVKTPSACLTPSGPHHAL*APELAP Trigger: TGGGGCAAGTTCTGGAGCCCACAGGGCGTGATGGGG...CCCTGAAGGAGTCAGGCAGGCTGAGGGGGTCTTCACCTGCCCCTGCCCAAAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGACTCCTTCAGGGCGACTGAGTCAGGCAGAAGCCAGAATCAACCCCAGGGGTCACAGGACCCTGTaGGCGCCATCCCTACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CLTPSGRLSQAEARINPRGHRTL*APSLLG Trigger: CCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACC...CCTGGGGTTGATTCTGGCTTCTGCCTGACTCAGTCGCCCTGAAGGAGTCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR-3UTR TCA 90 bp | CCATCCCTACTGGGGACGCAGCACTCACTGAAAACCAAGAGGAGTGTGAGGGGGCTCCTTCAGGGCGACTaGGTCAGGCAGAAGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PSLLGTQHSLKTKRSVRGLLQGD*VRQKPE Trigger: TTCTGGCTTCTGCCTGACTCAGTCGCCCTGAAGGAG...CCCCCTCACACTCCTCTTGGTTTTCAGTGAGTGCTGCGTCCCCAGTAGGGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR-3UTR GCA 90 bp | TGGGCGCCATCCCTACTGGGGACGCAGCACTCACTGAAAACCAAGAGGAGTGTGCTCCACACCCTCAGCTaGCTTAGAGACAGTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: WAPSLLGTQHSLKTKRSVLHTLS*LRDSGA Trigger: GGCTCCACTGTCTCTAAGGCAGCTGAGGGTGTGGAG...CACACTCCTCTTGGTTTTCAGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR CCA 72 bp | AGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTaGGCGCCATCCCTACTGGGGACGCAGCACTCACAG | + |
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Preference number: 3 (lower is better) Translates to: RWVDTGRGHRTL*APSLLGTQHSQ Trigger: CTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| 3UTR CCA 72 bp | AGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTaGGCGCCATCCCTACTGGGGACGCAGCACTCACTG | + |
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Preference number: 3 (lower is better) Translates to: RWVDTGRGHRTL*APSLLGTQHSL Trigger: CAGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR TCA 72 bp | TCCACACCCTCAGCTGCCTTAGAGACAGTGGAGCCATaGACCCCGTGGGCTTGGGCAGAGGGTCCTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: STPSAALETVEP*TPWAWAEGPPT Trigger: GGTGGGAGGACCCTCTGCCCAAGCCCACGGGGTTCATGGCTCCACTGTCTCTAAGGCAGCTGAGGGTGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR GCA 72 bp | GACTTTGGGCAGGGGCAGGTGAAGACCCCCTCAGCCTaGCTGACTCCTTCAGGGCGACTGAGTCAGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: DFGQGQVKTPSA*LTPSGRLSQAE Trigger: TTCTGCCTGACTCAGTCGCCCTGAAGGAGTCAGGCAGGCTGAGGGGGTCTTCACCTGCCCCTGCCCAAAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | GCTGGTGCTGGGCCCCGGGAGCCGCTGAGCGAGGTGGGTGGACACTGGCCGAGGCCTCCCAGCCCGTGCTaGGAGGACAGCGTCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGAGPREPLSEVGGHWPRPPSPC*EDSVRR Trigger: CCTGCGGACGCTGTCCTCTCAGCACGGGCTGGGAGG...CCTCGGCCAGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCCCAGCACCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR CCA 90 bp | AGCTGGTGCTGGGCCCCGGGAGCCGCTGAGCGAGGTGGGTGGACACTGGCCGAGCCACTGTGCGTAGGGTaGCCTCCCCCACCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SWCWAPGAAERGGWTLAEPLCVG*PPPPPS Trigger: GGAAGGGGGTGGGGGAGGCCACCCTACGCACAGTGG...CTCGGCCAGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCCCAGCACCAGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | GTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGGGCCCCGGGAGCCGCTaGGCGAGGTGGGTGGACACT | + |
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Preference number: 4 (lower is better) Translates to: VDTGRGHRTLWAPSLLGTGPGSR*ARWVDT Trigger: AGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCC...CGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GCTGGTGCTGGGCCCCGGGAGCCGCTGAGCGAGGTGGGTGGACACTGGCCGAGGGGGCGCCATCCCTACTaGGGACGCAGCACTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: AGAGPREPLSEVGGHWPRGRHPY*GRSTHR Trigger: TCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCC...CCTCGGCCAGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCCCAGCACCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR GCA 90 bp | TGGTGCTGGGCCCCGGGAGCCGCTGAGCGAGGTGGGTGGACACTGGCCGAGGTCCTCCCAGGTCTACACTaGGCCGCAGGCCCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: WCWAPGAAERGGWTLAEVLPGLH*AAGPGC Trigger: ACATCCTGGGCCTGCGGCGCAGTGTAGACCTGGGAG...GACCTCGGCCAGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCCCAGCACCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR GCA 90 bp | GGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGAGCCTCCCCCGAGGCTaGTCCGGTGGACACTCACGG | + |
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Preference number: 4 (lower is better) Translates to: GGWTLAEVTGPCGRHPYWSLPRG*SGGHSR Trigger: CCGTGAGTGTCCACCGGAGCAGCCTCGGGGGAGGCT...CCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | AGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGCCCAACCACACGGCCTaGGCCCTGGGCACCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: RWVDTGRGHRTLWAPSLLPNHTA*ALGTET Trigger: GGTCTCGGTGCCCAGGGCCCAGGCCGTGTGGTTGGG...CAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR TCA 90 bp | CACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATGGCCCCGGGAGCCGCTaGGCGAGGTGGGTGGACACT | + |
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Preference number: 4 (lower is better) Translates to: HRTLWAPSLLGTQHSQKDGPGSR*ARWVDT Trigger: AGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCC...ATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR GCA 90 bp | AGCTGGTGCTGGGCCCCGGGAGCCGCTGAGCGAGGTGGGTGGACACTGGCCGAGCACTCACGGTCCTTCTaGAGCTGGGCCTGCTACTGT | + |
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Preference number: 4 (lower is better) Translates to: SWCWAPGAAERGGWTLAEHSRSF*SWACYC Trigger: ACAGTAGCAGGCCCAGCTGCAGAAGGACCGTGAGTG...CTCGGCCAGTGTCCACCCACCTCGCTCAGCGGCTCCCGGGGCCCAGCACCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGAACACGGCCTGGGCCCTaGGCACCGAGACCAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GWTLAEVTGPCGRHPYWGTRPGP*APRPKP Trigger: TGGCTTTGGTCTCGGTGCCCAGGGCCCAGGCCGTGT...TCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR CCA 90 bp | TGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCGGTCACAGGACCCTGTaGGCGCCATCCCTACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WPRSQDPVGAIPTGDAALGHRTL*APSLLG Trigger: CCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACC...GAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GCCTCCCCCGAGGCTGCTCCGGTGGACACTCACGGTCCTTCTGCAGCTGGGCCTGCTGAGCGAGGTGGGTaGACACTGGCCGAGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: ASPEAAPVDTHGPSAAGPAERGG*TLAEVT Trigger: TGTGACCTCGGCCAGTGTCCACCCACCTCGCTCAGC...AGGCCCAGCTGCAGAAGGACCGTGAGTGTCCACCGGAGCAGCCTCGGGGGAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCAATTCTGAGCTGGTGCTaGGCCCCGGGAGCCGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRGHRTLWAPSLLGTQHSILSWC*APGAAE Trigger: CTCAGCGGCTCCCGGGGCCCAGCACCAGCTCAGAAT...TGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | TGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCCTGGGCCTGCTACTGTaGCAGGAAGCCCAGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WPRSQDPVGAIPTGDAALLGLLL*QEAQAP Trigger: AGGAGCCTGGGCTTCCTGTCACAGTAGCAGGCCCAG...GAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | GGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGAGACAGTGGAGCCATaGACCCCGTGGGCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GGWTLAEVTGPCGRHPYWETVEP*TPWAWA Trigger: TGCCCAAGCCCACGGGGTTCATGGCTCCACTGTCTC...CCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGAGGTGGGTGGACACTaGCCGAGGTCACAGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: GGHWPRSQDPVGAIPTGDEVGGH*PRSQDP Trigger: AGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCTC...GTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCAGCTGAGCGAGGTGGGTaGACACTGGCCGAGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: GRGHRTLWAPSLLGTQHSAERGG*TLAEVT Trigger: TGTGACCTCGGCCAGTGTCCACCCACCTCGCTCAGC...TGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | TGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCTCCTGCTCCACTTGGTaGAGAGCCCCATGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WPRSQDPVGAIPTGDAALSCSTW*RAPWPP Trigger: AGGAGGCCATGGGGCTCTTCACCAAGTGGAGCAGGA...GAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAGCCATGAACCCCGTGGGCTTGGGCAGAGGGTCCTCCCACCCACTGTGCAAGAGAGCCCAGGGTaGGGCTCAGGATGGCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QWSHEPRGLGQRVLPPTVQESPG*GSGWRL Trigger: AAGCCGCCATCCTGAGCCTCACCCTGGGCTCTCTTG...CACAGTGGGTGGGAGGACCCTCTGCCCAAGCCCACGGGGTTCATGGCTCCACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR GCA 90 bp | ACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCCAGGGCCCAAGAAGCTaGTCAGGGTCCAGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: TLAEVTGPCGRHPYWGRSQGPRS*SGSSLP Trigger: GGGAAGACTGGACCCTGAGCAGCTTCTTGGGCCCTG...GCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR GCA 90 bp | GGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGATTTATTCTGAGCTGGTaGTGGGCCCCGGGAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GWTLAEVTGPCGRHPYWGFILSW*WAPGAA Trigger: AGCGGCTCCCGGGGCCCAGCACCAGCTCAGAATAAA...TCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR GCA 90 bp | GGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGAAAGACCCCCTCAGCCTaGCTGACTCCTTCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GWTLAEVTGPCGRHPYWGKTPSA*LTPSGR Trigger: TCGCCCTGAAGGAGTCAGGCAGGCTGAGGGGGTCTT...TCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCAAGGTCCATGACACTCTaGTCACACCCTCCCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GRGHRTLWAPSLLGTQHSRSMTL*SHPPSP Trigger: CGGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCT...TGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR CCA 90 bp | GCAGGGGCAGGTGAAGACCCCCTCAGCCTGCCTGACTCCTTCAGGGCGACTGAGGAGGTGGGTGGACACTaGCCGAGGTCACAGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: AGAGEDPLSLPDSFRATEEVGGH*PRSQDP Trigger: AGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCTC...CTCAGTCGCCCTGAAGGAGTCAGGCAGGCTGAGGGGGTCTTCACCTGCCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GAGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTCCCCATCACGCCCTGTaGGCTCCAGAACTTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: EVGGHWPRSQDPVGAIPTPHHAL*APELAP Trigger: TGGGGCAAGTTCTGGAGCCCACAGGGCGTGATGGGG...AGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | GAGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGAATCGCTTTATTCTaGGCTGGTGCTGGGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: EVGGHWPRSQDPVGAIPTGIALF*AGAGPR Trigger: CCGGGGCCCAGCACCAGCTCAGAATAAAGCGATTCC...AGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR TCA 90 bp | AGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGAATCGCTTTATTCTaGGCTGGTGCTGGGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RWVDTGRGHRTLWAPSLLGIALF*AGAGPR Trigger: CCGGGGCCCAGCACCAGCTCAGAATAAAGCGATTCC...CAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | CACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATGGTCACAGGACCCTGTaGGCGCCATCCCTACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: HRTLWAPSLLGTQHSQKDGHRTL*APSLLG Trigger: CCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACC...ATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR CCA 90 bp | CAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATCTATTCTGAGCTGGTGCTaGGCCCCGGGAGCCGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QDPVGAIPTGDAALTEGSILSWC*APGAAE Trigger: CTCAGCGGCTCCCGGGGCCCAGCACCAGCTCAGAAT...AGATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS-3UTR CCA 90 bp | GGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACACACCCTCCCAGCCTaGAAAAGAAGGGGCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GRGHRTLWAPSLLGTQHSHTLPA*KRRGLS Trigger: TGACAGGCCCCTTCTTTTCCAGGCTGGGAGGGTGTG...TGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAGCCATGAACCCCGTGGGCTTGGGCAGAGGGTCCTCCCACCCACTGTGCGGTCCTTCTGCAGCTaGGCCTGCTACTGTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: QWSHEPRGLGQRVLPPTVRSFCS*ACYCDR Trigger: CCTGTCACAGTAGCAGGCCCAGCTGCAGAAGGACCG...CACAGTGGGTGGGAGGACCCTCTGCCCAAGCCCACGGGGTTCATGGCTCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS-3UTR CCA 90 bp | GGTGAAGACCCCCTCAGCCTGCCTGACTCCTTCAGGGCGACTGAGTCAGGCAGAAAGACTCGCCTGCCGTaGGGACAAGACCCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GEDPLSLPDSFRATESGRKTRLP*GQDPQA Trigger: GGCCTGGGGGTCTTGTCCCCACGGCAGGCGAGTCTT...TCTGCCTGACTCAGTCGCCCTGAAGGAGTCAGGCAGGCTGAGGGGGTCTTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| 3UTR CAA 72 bp | TGCCTTAGAGACAGTGGAGCCATGAACCCCGTGGGCTaGGGCAGAGGGTCCTCCCACCCACTGTGCGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLRDSGAMNPVG*GRGSSHPLCVG Trigger: CCCTACGCACAGTGGGTGGGAGGACCCTCTGCCCAAGCCCACGGGGTTCATGGCTCCACTGTCTCTAAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR TCA 90 bp | GAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGATCCTGCTCCACTTGGTaGAGAGCCCCATGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVTGPCGRHPYWGRSTHRSCSTW*RAPWPP Trigger: AGGAGGCCATGGGGCTCTTCACCAAGTGGAGCAGGA...TCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGAGGTCCTTCTGCAGCTaGGCCTGCTACTGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWVDTGRGHRTLWAPSLLRSFCS*ACYCDR Trigger: CCTGTCACAGTAGCAGGCCCAGCTGCAGAAGGACCT...CAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR CCA 90 bp | CAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATCTCGCTTTATTCTGAGCTaGTGCTGGGCCCCGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDPVGAIPTGDAALTEGSRFILS*CWAPGA Trigger: GGCTCCCGGGGCCCAGCACCAGCTCAGAATAAAGCG...AGATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR CCA 90 bp | CACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACTGAAAACCCGCTTTATTCTGAGCTaGTGCTGGGCCCCGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRTLWAPSLLGTQHSLKTRFILS*CWAPGA Trigger: GGCTCCCGGGGCCCAGCACCAGCTCAGAATAAAGCG...GGTTTTCAGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGAGGTCCATGACACTCTaGTCACACCCTCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWVDTGRGHRTLWAPSLLRSMTL*SHPPSL Trigger: CAGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCT...CAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCAGCTTTATCAGGTCCATaGCACTCTGGTCACACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HWPRSQDPVGAIPTGDAAALSGP*HSGHTL Trigger: GAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGC...TGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
||
| CDS-3UTR TCA 90 bp | GTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGGCTTTATCAGGTCCATaGCACTCTGGTCACACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VDTGRGHRTLWAPSLLGTALSGP*HSGHTL Trigger: GAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGC...CGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
||
| CDS-3UTR TCA 90 bp | ACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCCTCCAGCACGCCTATTaGGGGATTCTCAAACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLAEVTGPCGRHPYWGRSLQHAY*GILKHP Trigger: TGGGTGTTTGAGAATCCCTCAATAGGCGTGCTGGAG...GCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
||
| CDS-3UTR TCA 90 bp | CAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATCTACAGCTCCACGGTGTTaGAGGGCTCGTCCCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QDPVGAIPTGDAALTEGSTAPRC*RARPRT Trigger: AGTTCGGGGACGAGCCCTTCAACACCGTGGAGCTGT...AGATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR TCA 90 bp | GACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATCTTGTCTGGGCCTGCTACTGTaGCAGGAAGCCCAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPVGAIPTGDAALTEGSCLGLLL*QEAQAP Trigger: AGGAGCCTGGGCTTCCTGTCACAGTAGCAGGCCCAG...ACAAGATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCATCTTGTGAGCACAGGTaGCTAGAAGGGGAGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HWPRSQDPVGAIPTGDAASCEHR*LEGEAR Trigger: TCTTGCCTCCCCTTCTAGTCACCTGTGCTCACAAGA...TGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR GCA 90 bp | CACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATTTTATTCTGAGCTGGTaGTGGGCCCCGGGAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRTLWAPSLLGTQHSQKDFILSW*WAPGAA Trigger: AGCGGCTCCCGGGGCCCAGCACCAGCTCAGAATAAA...ATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCGCCATCCCTACTGGGGACGCAGCACTCACTGAAAACCAAGAGGAGTGTGGTGGGCTCCAGAACTTaGCCCAAGCCTCCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAPSLLGTQHSLKTKRSVVGSRT*PKPPPR Trigger: CCTCGGGGGAGGCTTGGGGCAAGTTCTGGAGCCCAC...CACACTCCTCTTGGTTTTCAGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR GCA 90 bp | CCATCCCTACTGGGGACGCAGCACTCACTGAAAACCAAGAGGAGTGTGAGGGGGCCCACAAGACTCGCCTaGCGTGGGGACAAGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLGTQHSLKTKRSVRGPTRLA*RGDKTP Trigger: GGGGGTCTTGTCCCCACGGCAGGCGAGTCTTGTGGG...CCCCCTCACACTCCTCTTGGTTTTCAGTGAGTGCTGCGTCCCCAGTAGGGATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR GCA 90 bp | CTGACTCCTTCAGGGCGACTGAGTCAGGCAGAAGCCAGAATCAACCCCAGGGTCTCCTCCCACCCACTGTaGGTAGGGTGGCCTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTPSGRLSQAEARINPRVSSHPL*VGWPPP Trigger: TGGGGGAGGCCACCCTACGCACAGTGGGTGGGAGGA...GACCCTGGGGTTGATTCTGGCTTCTGCCTGACTCAGTCGCCCTGAAGGAGTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR CCA 90 bp | TCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGACCATGGCCTCCTGGCTaGCTGTCTCCGTCAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQDPVGAIPTGDAALTEGPWPPG*LSPSDC Trigger: ACAGTCTGACGGAGACAGCCAGCCAGGAGGCCATGG...TCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACTGAAAACCAAGAGGCCGAGGCTGCTCCGGTaGACACTCACGGTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLWAPSLLGTQHSLKTKRPRLLR*TLTVLL Trigger: CAGAAGGACCGTGAGTGTCCACCGGAGCAGCCTCGG...CCTCTTGGTTTTCAGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR GCA 90 bp | CTGTGGAATCGCTTTATTCTGAGCTGGTGCTGGGCCCCGGGAGCCGCTGAGCGACTCCACACCCTCAGCTaGCTTAGAGACAGTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWNRFILSWCWAPGAAERLHTLS*LRDSGA Trigger: GGCTCCACTGTCTCTAAGGCAGCTGAGGGTGTGGAG...TCGCTCAGCGGCTCCCGGGGCCCAGCACCAGCTCAGAATAAAGCGATTCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR TCA 90 bp | GAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGACTCCAGCACGCCTATTaGGGGATTCTCAAACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVTGPCGRHPYWGRSTHRLQHAY*GILKHP Trigger: TGGGTGTTTGAGAATCCCTCAATAGGCGTGCTGGAG...TCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCGCCATCCCTACTGGGGACGCAGCACTCACTGAAAACCAAGAGGAGTGTGACAGCTCCACGGTGTTaGAGGGCTCGTCCCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WAPSLLGTQHSLKTKRSVTAPRC*RARPRT Trigger: AGTTCGGGGACGAGCCCTTCAACACCGTGGAGCTGT...CACACTCCTCTTGGTTTTCAGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR CCA 90 bp | TGCCTGACTCCTTCAGGGCGACTGAGTCAGGCAGAAGCCAGAATCAACCCCAGGCCATGGCCTCCTGGCTaGCTGTCTCCGTCAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLTPSGRLSQAEARINPRPWPPG*LSPSDC Trigger: ACAGTCTGACGGAGACAGCCAGCCAGGAGGCCATGG...CCTGGGGTTGATTCTGGCTTCTGCCTGACTCAGTCGCCCTGAAGGAGTCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR TCA 90 bp | GACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTCACAGAAGGATCTTGTCACAGAAGGATCTTGTaGGCACAGGTGAGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPVGAIPTGDAALTEGSCHRRIL*AQVRSF Trigger: GAAGGACCTCACCTGTGCTCACAAGATCCTTCTGTG...ACAAGATCCTTCTGTGAGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS-3UTR TCA 90 bp | TGCCTGACTCCTTCAGGGCGACTGAGTCAGGCAGAAGCCAGAATCAACCCCAGGACCAGAAGGATCTTGTaGGCACAGGTGACTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLTPSGRLSQAEARINPRTRRIL*AQVTRR Trigger: CCTTCTAGTCACCTGTGCTCACAAGATCCTTCTGGT...CCTGGGGTTGATTCTGGCTTCTGCCTGACTCAGTCGCCCTGAAGGAGTCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS GCA 90 bp | CCTGTAGCCTCCTGGCTCTCGGGAGCGGAGTCAGCCCTCCGTCCCTaGCCGCAGGGGGCCTGGGGATGCTGCAGGGAAGAACGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVASWLSGAESALRP*PQGAWGCCREERPG Trigger: CCCAGGCCGTTCTTCCCTGCAGCATCCCCAGGCCCCCTGCGGGCAGGGACGGAGGGCTGACTCCGCTCCCGAGAGCCAGGAGGCTACAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000471509.5 ENST00000480347.1 ENST00000494091.5 ENST00000497749.5 |
||
| CDS CCA 90 bp | CCCTCAGGATGGGCAGCAATCCCAAGACCAGAACCTGTAGCCTCCTaGCTCTCGGGAGCGGAGTCAGCCCTCCGTCCCTGCCCGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSGWAAIPRPEPVAS*LSGAESALRPCPQG Trigger: CCCCTGCGGGCAGGGACGGAGGGCTGACTCCGCTCCCGAGAGCCAGGAGGCTACAGGTTCTGGTCTTGGGATTGCTGCCCATCCTGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000471509.5 ENST00000480347.1 ENST00000494091.5 ENST00000497749.5 |
||
| CDS-3UTR CAA 90 bp | CGCTTTATTCTGAGCTGGTGCTGGGCCCCGGGAGCCGCTGAGCGAGGTGGGTGGATGAACCCCGTGGGCTaGGGCAGAGGGTCCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RFILSWCWAPGAAERGGWMNPVG*GRGSSH Trigger: GTGGGAGGACCCTCTGCCCAAGCCCACGGGGTTCAT...CCACCCACCTCGCTCAGCGGCTCCCGGGGCCCAGCACCAGCTCAGAATAAAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS GCA 90 bp | CCAAGCCTCCCCCGAGGCTGCTCCGGTGGACACTCACGGTCCTTCTaGAGCTGGGCCTGCTACTGTGACAGGAAGCCCAGGCTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLPRGCSGGHSRSF*SWACYCDRKPRLLL Trigger: GAGCAGGAGCCTGGGCTTCCTGTCACAGTAGCAGGCCCAGCTGCAGAAGGACCGTGAGTGTCCACCGGAGCAGCCTCGGGGGAGGCTTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR CAA 90 bp | CTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGGGACGCAGCACTTACAGCTCCACGGTGTaGAAGGGCTCGTCCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAEVTGPCGRHPYWGRSTYSSTV*KGSSPN Trigger: GTTCGGGGACGAGCCCTTCAACACCGTGGAGCTGTA...AGTGCTGCGTCCCCAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTTACAGCTCCACGGTGTaGAAGGGCTCGTCCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EVGGHWPRSQDPVGAIPTYSSTV*KGSSPN Trigger: GTTCGGGGACGAGCCCTTCAACACCGTGGAGCTGTA...AGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341206.9 ENST00000476567.1 |
||
| CDS GCA 90 bp | CGAGGCTGCTCCGGTGGACACTCACGGTCCTTCTGCAGCTGGGCCTaGTACTGTGACAGGAAGCCCAGGCTCCTGCTCCACTTGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGCSGGHSRSFCSWA*YCDRKPRLLLHLVK Trigger: CTTCACCAAGTGGAGCAGGAGCCTGGGCTTCCTGTCACAGTAGCAGGCCCAGCTGCAGAAGGACCGTGAGTGTCCACCGGAGCAGCCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGTGGACACTGGCCGAGGTCACAGGACCCTGTGGGCGCCATCCCTACTGGACAGCGTCCGCAGGTaGTTTTCTGGAGTGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RWVDTGRGHRTLWAPSLLDSVRR*FSGVRV Trigger: GACCCTCACTCCAGAAAACAACCTGCGGACGCTGTC...CAGTAGGGATGGCGCCCACAGGGTCCTGTGACCTCGGCCAGTGTCCACCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS TCA 90 bp | CGCCCTCTGCACCTATGGGGACCTTGGCTGGACCTCACTGGTGTCTaGGCCTGCTGGGAACAAGGTTCCAATCCTCTGTCCAGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLHLWGPWLDLTGV*ACWEQGSNPLSRGF Trigger: GAAGCCCCTGGACAGAGGATTGGAACCTTGTTCCCAGCAGGCTCAGACACCAGTGAGGTCCAGCCAAGGTCCCCATAGGTGCAGAGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000471509.5 ENST00000480347.1 |
||
| CDS GCA 90 bp | CAGCCCTGTACCTGTAGACAGCCACTAAACAGGCCCCTCGCCCTCTaGACCTATGGGGACCTTGGCTGGACCTCACTGGTGTCTGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPCTCRQPLNRPLAL*TYGDLGWTSLVSEP Trigger: AGGCTCAGACACCAGTGAGGTCCAGCCAAGGTCCCCATAGGTGCAGAGGGCGAGGGGCCTGTTTAGTGGCTGTCTACAGGTACAGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480347.1 |
||
| CDS TCA 90 bp | CAGCACGCCTATTGCTGGTGCCAGCATCAAGGGGCTTTCAGACACTaGCGGACAGACAGACAAGCACTGCCCCAGCCTGTCCCAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QHAYCWCQHQGAFRH*RTDRQALPQPVPGV Trigger: CACACCTGGGACAGGCTGGGGCAGTGCTTGTCTGTCTGTCCGTCAGTGTCTGAAAGCCCCTTGATGCTGGCACCAGCAATAGGCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480347.1 |
||
| CDS GCA 90 bp | CACGCCTATTGCTGTAGACAGCCACTAAACAGGCCCCTCGCCCTCTaGACCTATGGGGACCTTGGCTGGACCTCACTGGTGTCTGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HAYCCRQPLNRPLAL*TYGDLGWTSLVSEP Trigger: AGGCTCAGACACCAGTGAGGTCCAGCCAAGGTCCCCATAGGTGCAGAGGGCGAGGGGCCTGTTTAGTGGCTGTCTACAGCAATAGGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471509.5 |
||
| CDS CCA 90 bp | CCACTAAACAGGCCCCTCGCCCTCTGCACCTATGGGGACCTTGGCTaGACCTCACTGGTGTCTGAGCCTGCTGGGAACAAGGTTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PLNRPLALCTYGDLG*TSLVSEPAGNKVPI Trigger: GATTGGAACCTTGTTCCCAGCAGGCTCAGACACCAGTGAGGTCCAGCCAAGGTCCCCATAGGTGCAGAGGGCGAGGGGCCTGTTTAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000471509.5 ENST00000480347.1 |
||
| CDS TCA 90 bp | GCACGCCTATTGCTATGGGGACCTTGGCTGGACCTCACTGGTGTCTaGGCCTGCTGGGAACAAGGTTCCAATCCTCTGTCCAGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARLLLWGPWLDLTGV*ACWEQGSNPLSRGF Trigger: GAAGCCCCTGGACAGAGGATTGGAACCTTGTTCCCAGCAGGCTCAGACACCAGTGAGGTCCAGCCAAGGTCCCCATAGCAATAGGCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494091.5 |
||
| CDS CCA 90 bp | CAAGGTTCCAATCCTCTGTCCAGGGGCTTCTCTTCACCCTCAGGATaGGCAGCAATCCCAAGACCAGAACCTGTAGCCTCCTGGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QGSNPLSRGFSSPSG*AAIPRPEPVASWLS Trigger: CGAGAGCCAGGAGGCTACAGGTTCTGGTCTTGGGATTGCTGCCCATCCTGAGGGTGAAGAGAAGCCCCTGGACAGAGGATTGGAACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000471509.5 ENST00000480347.1 ENST00000494091.5 ENST00000497749.5 |
||
| CDS TCA 90 bp | AGGGATTCTCAAACACCCATCCGGAGTTTCGCTTTATCAGGTCCATaGCACTCTGGTCACACCCTCCCAGCCCGTGCTGAGAGGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RDSQTPIRSFALSGP*HSGHTLPARAERTA Trigger: CGCTGTCCTCTCAGCACGGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGCGAAACTCCGGATGGGTGTTTGAGAATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341206.9 |
||
| CDS CCA 90 bp | TCAAACACCCATCCGGAGTTTCGCTTTATCAGGTCCATGACACTCTaGTCACACCCTCCCAGCCTGGAAAAGAAGGGGCCTGTCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SNTHPEFRFIRSMTL*SHPPSLEKKGPVTH Trigger: GTGGGTGACAGGCCCCTTCTTTTCCAGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGCGAAACTCCGGATGGGTGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS TCA 90 bp | AGGGATTCTCAAACACCCATCCGGAGTTTCGCTTTATCAGGTCCATaGCACTCTGGTCACACCCTCCCAGCCTGGAAAAGAAGGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDSQTPIRSFALSGP*HSGHTLPAWKRRGL Trigger: CAGGCCCCTTCTTTTCCAGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGCGAAACTCCGGATGGGTGTTTGAGAATCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS GCA 72 bp | TCCTGGCTCTCGGGAGCGGAGTCAGCCCTCCGTCCCTaGCCGCAGGGGGCCTGGGGATGCTGCAGGGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SWLSGAESALRP*PQGAWGCCREE Trigger: TTCTTCCCTGCAGCATCCCCAGGCCCCCTGCGGGCAGGGACGGAGGGCTGACTCCGCTCCCGAGAGCCAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000471509.5 ENST00000480347.1 ENST00000494091.5 ENST00000497749.5 |
||
| CDS GCA 72 bp | CCCCGAGGCTGCTCCGGTGGACACTCACGGTCCTTCTaGAGCTGGGCCTGCTACTGTGACAGGAAGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRGCSGGHSRSF*SWACYCDRKPR Trigger: CCTGGGCTTCCTGTCACAGTAGCAGGCCCAGCTGCAGAAGGACCGTGAGTGTCCACCGGAGCAGCCTCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS CCA 72 bp | TGGGCAGCAATCCCAAGACCAGAACCTGTAGCCTCCTaGCTCTCGGGAGCGGAGTCAGCCCTCCGTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WAAIPRPEPVAS*LSGAESALRPC Trigger: GCAGGGACGGAGGGCTGACTCCGCTCCCGAGAGCCAGGAGGCTACAGGTTCTGGTCTTGGGATTGCTGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000471509.5 ENST00000480347.1 ENST00000494091.5 ENST00000497749.5 |
||
| CDS GCA 72 bp | TCCGGTGGACACTCACGGTCCTTCTGCAGCTGGGCCTaGTACTGTGACAGGAAGCCCAGGCTCCTGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGGHSRSFCSWA*YCDRKPRLLLH Trigger: GTGGAGCAGGAGCCTGGGCTTCCTGTCACAGTAGCAGGCCCAGCTGCAGAAGGACCGTGAGTGTCCACCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476567.1 |
||
| CDS CCA 72 bp | CAGGGTCCAGTCTTCCCAACCACACGGCCTGGGCCCTaGGCACCGAGACCAAAGCCAGAAAAGCAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QGPVFPTTRPGP*APRPKPEKQPA Trigger: TGCTGGCTGCTTTTCTGGCTTTGGTCTCGGTGCCCAGGGCCCAGGCCGTGTGGTTGGGAAGACTGGACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS CCA 72 bp | CCACCACCCCCACGACGTTCTTCATGTCCTTCTCCATaGCAAAGCCCTTTTCCCGGGAGGCCACCGCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PPPPRRSSCPSP*QSPFPGRPPQA Trigger: TGCTTGCGGTGGCCTCCCGGGAAAAGGGCTTTGCCATGGAGAAGGACATGAAGAACGTCGTGGGGGTGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS TCA 72 bp | CAAACACCCATCCGGAGTTTCGCTTTATCAGGTCCATaGCACTCTGGTCACACCCTCCCAGCCCGTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QTPIRSFALSGP*HSGHTLPARAE Trigger: CTCAGCACGGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGCGAAACTCCGGATGGGTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341206.9 |
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| CDS TCA 72 bp | GACGCAGCACTCACAGAAGGATCTTGTGAGCACAGGTaGGGTCCTTCTGCAGCTGGGCCTGCTACTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: DAALTEGSCEHR*GPSAAGPATVT Trigger: TGTCACAGTAGCAGGCCCAGCTGCAGAAGGACCTCACCTGTGCTCACAAGATCCTTCTGTGAGTGCTGCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000341206.9 ENST00000471509.5 ENST00000494091.5 ENST00000497749.5 |
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| CDS TCA 72 bp | TTGCTATGGGGACCTTGGCTGGACCTCACTGGTGTCTaGGCCTGCTGGGAACAAGGTTCCAATCCTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLWGPWLDLTGV*ACWEQGSNPLS Trigger: GGACAGAGGATTGGAACCTTGTTCCCAGCAGGCTCAGACACCAGTGAGGTCCAGCCAAGGTCCCCATAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494091.5 |
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| CDS CCA 72 bp | AATCCTCTGTCCAGGGGCTTCTCTTCACCCTCAGGATaGGCAGCAATCCCAAGACCAGAACCTGTAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NPLSRGFSSPSG*AAIPRPEPVAS Trigger: GGAGGCTACAGGTTCTGGTCTTGGGATTGCTGCCCATCCTGAGGGTGAAGAGAAGCCCCTGGACAGAGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000471509.5 ENST00000480347.1 ENST00000494091.5 ENST00000497749.5 |
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| CDS CCA 72 bp | CATCCGGAGTTTCGCTTTATCAGGTCCATGACACTCTaGTCACACCCTCCCAGCCTGGAAAAGAAGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: HPEFRFIRSMTL*SHPPSLEKKGP Trigger: AGGCCCCTTCTTTTCCAGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGCGAAACTCCGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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| CDS TCA 72 bp | CAAACACCCATCCGGAGTTTCGCTTTATCAGGTCCATaGCACTCTGGTCACACCCTCCCAGCCTGGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QTPIRSFALSGP*HSGHTLPAWKR Trigger: TCTTTTCCAGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGCGAAACTCCGGATGGGTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476567.1 |
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