Pregenerated sensors for LCN15 (Homo sapiens)
Ensembl gene IDs: ENSG00000177984Ensembl transcript IDs: ENST00000316144.6, ENST00000482511.1, ENST00000495223.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGAGGATGGAGAGACTCCAGGTGGTCCCCGAGGGCTGTGGGTCTTaGCTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: WRMERLQVVPEGCGS*LQGQRRLLLWLHLG Trigger: TCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCTGGAGTCTCTCCATCCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| 3UTR CAA 90 bp | GTGGAGGATGGAGAGACTCCAGGTGGTCCCCGAGGGCTGTGGGTCTaGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VEDGETPGGPRGLWV*TPGAKAPAALAPPG Trigger: CCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCTGGAGTCTCTCCATCCTCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| 3UTR TCA 72 bp | GAGAGACTCCAGGTGGTCCCCGAGGGCTGTGGGTCTTaGCTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ERLQVVPEGCGS*LQGQRRLLLWL Trigger: GAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCTGGAGTCTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| 3UTR CCA 72 bp | GAGGATGGAGAGACTCCAGGTGGTCCCCGAGGGCTGTaGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EDGETPGGPRGL*VLTPGAKAPAA Trigger: AGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCTGGAGTCTCTCCATCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGCCTCAGCCTGAGCCGTaGGCGCCCAGAGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGKGACCFGSTWEGRGWPQPEP*APRAGS Trigger: TGACCCTGCTCTGGGCGCCCACGGCTCAGGCTGAGG...CCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCAGCAGAACCTCAGCCTaGGCCGTGGGCGCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWSPRAVGLDSRGKGACCSRTSA*AVGAQS Trigger: GCTCTGGGCGCCCACGGCTCAGGCTGAGGTTCTGCT...GCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGGAGGGCTGTGGGTCTTaGCTCCAGGGGCAAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGKGACCFGSTWEGRGWEGCGS*LQGQRR Trigger: GCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTC...CCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGGTCCCCGAGGGCTGTaGGTCTTGACTCCAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGQRRLLLWLHLGRAGVGPRGL*VLTPGA Trigger: TGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACC...CACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGAGGGGCAAAGGCGCCTaGTGCTTTGGCTCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQGQRRLLLWLHLGRAGVRGKGA*CFGSTW Trigger: CCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCT...CACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCCCCGGGAACTCCATGTaGACGTGGAGGCCGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRAVGLDSRGKGACCFGPGNSM*TWRPPS Trigger: GGAGGGCGGCCTCCACGTCCACATGGAGTTCCCGGG...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTTGGGAAGGGCGGGGGTaGGGCTCCGGAGGTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSPRAVGLDSRGKGACCFWEGRG*GSGGVR Trigger: CCTGACACCTCCGGAGCCCCACCCCCGCCCTTCCCA...AAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTGCTTTGGCTCCACCTaGGAAGGGCGGGGGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRAVGLDSRGKGACCFGCFGST*EGRGWG Trigger: GCCCCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCA...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGTGGAGAGACTCCAGGTaGTCCCCGAGGGCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGKGACCFGSTWEGRGWWRDSR*SPRAVG Trigger: ACCCACAGCCCTCGGGGACCACCTGGAGTCTCTCCA...CCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | CCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCCCTCCTCTGTGGGCCTaGTGGCCCTGGTGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: PRAVGLDSRGKGACCFGSPPLWA*WPWWTW Trigger: CCATGTCCACCAGGGCCATCAGGCCCACAGAGGAGG...GGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGCCAAGGCCGGGACTCTaGAGTGTCCCTCGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRGLWVLTPGAKAPAALPRPGL*SVPRSP Trigger: TGGGCTCCGAGGGACACTTCAGAGTCCCGGCCTTGG...CAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGCTGCACCATGGTGCTaGGGGCCCCCTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WSPRAVGLDSRGKGACCFAAPWC*GPPPAP Trigger: AGGAGCTGGAGGGGGCCCTCAGCACCATGGTGCAGC...AAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGCTGACTGGGGCAGCATaGCCATCATGTCCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGKGACCFGSTWEGRGWLTGAA*PSCPWG Trigger: TCCCCAAGGACATGATGGTCATGCTGCCCCAGTCAG...CCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGAGTCTGTGTCCACGATaGGCACGTCCAGGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGQRRLLLWLHLGRAGVSLCPR*ARPGSP Trigger: TGGGCTACCTGGACGTGCGCATCGTGGACACAGACT...CACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR GCA 90 bp | AGGTGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCGGCAAAGGCGCCTGCTaGTTTGGCTCCACCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RWSPRAVGLDSRGKGACCGKGAC*FGSTWE Trigger: TTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCC...GCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGTGGCCCTGGTGGACATaGACAGGTGGTCCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGKGACCFGSTWEGRGWWPWWT*TGGPSC Trigger: GCAAGAAGGACCACCTGTCCATGTCCACCAGGGCCA...CCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTACTCGGCATCCACCTaGTTACAGCCGTCCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRAVGLDSRGKGACCFGYSAST*LQPSAP Trigger: GGGGGCGGACGGCTGTAACCAGGTGGATGCCGAGTA...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| 3UTR CAA 72 bp | GGAGAGACTCCAGGTGGTCCCCGAGGGCTGTGGGTCTaGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GETPGGPRGLWV*TPGAKAPAALA Trigger: AGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCTGGAGTCTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTTGCGCCGAGCAGGAATaGCATCATCCCCTCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPRAVGLDSRGKGACCFCAEQE*HHPLPC Trigger: GCAGGGGAGGGGATGATGTCATTCCTGCTCGGCGCA...AAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGAACTCCATGTGGACGTaGAGGCCGCCCTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPRGLWVLTPGAKAPAALNSMWT*RPPSSV Trigger: CACAGAGGAGGGCGGCCTCCACGTCCACATGGAGTT...CAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR GCA 90 bp | AGGTGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTGCCCAGGAAGACCCTaGAGTCAGATGCCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RWSPRAVGLDSRGKGACCCPGRP*SQMPWR Trigger: TCTCCATGGCATCTGACTGCAGGGTCTTCCTGGGCA...GCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR GCA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCGACCCTGCAGTCAGATaGCATGGAGACCACGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRAVGLDSRGKGACCFGDPAVR*HGDHVP Trigger: TGGTACGTGGTCTCCATGGCATCTGACTGCAGGGTC...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR GCA 90 bp | CCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCCCTTGCTCTCAGGGTTaGATGCATCTGACTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRAVGLDSRGKGACCFGSPCSQG*MHLTGA Trigger: TGCCCCAGTCAGATGCATGCAACCCTGAGAGCAAGG...GGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | CCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCTGCAGTCAGATGCCATaGAGACCACGTACCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRAVGLDSRGKGACCFGSCSQMP*RPRTRG Trigger: GCCTCTGGTACGTGGTCTCCATGGCATCTGACTGCA...GGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | CCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCAAGGACTTCAGAGCCTaGGGACTCACATCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRAVGLDSRGKGACCFGSKDFRA*GLTSWV Trigger: GACCCAGGATGTGAGTCCCCAGGCTCTGAAGTCCTT...GGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGTGGACATGGACAGGTaGTCCTTCTTGCCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSPRAVGLDSRGKGACCFVDMDR*SFLPRK Trigger: CTTCCTGGGCAAGAAGGACCACCTGTCCATGTCCAC...AAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTTGCATGCATCTGACTaGGGCAGCATGACCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SPRAVGLDSRGKGACCFGLHASD*GSMTIM Trigger: CATGATGGTCATGCTGCCCCAGTCAGATGCATGCAA...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGGCAGCATCTGTTTATTaGATAGAAAGAGACGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGKGACCFGSTWEGRGWAASVY*IERDVP Trigger: TGGGACGTCTCTTTCTATTCAATAAACAGATGCTGC...CCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGAGAACTTTTCAGCATTaGAGTCAGGCTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPRGLWVLTPGAKAPAALRTFQH*SQAAAE Trigger: TTCTGCTGCAGCCTGACTTCAATGCTGAAAAGTTCT...CAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS GCA 90 bp | GACCCCTCTGGTCAGGGGCGGGAGTCCTGCCAGGGAGGCCAGCACTaGCAGTCCTCTGGAGTGAGAGTGAGGCAGGAGAAGAGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DPSGQGRESCQGGQH*QSSGVRVRQEKRAW Trigger: CCAGGCCCTCTTCTCCTGCCTCACTCTCACTCCAGAGGACTGGCAGTGCTGGCCTCCCTGGCAGGACTCCCGCCCCTGACCAGAGGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 90 bp | CTCCCAAGTGACCTCTCTGTGTCCCCACAGAGCACCCAGGGACACTaGGCAAGGAGCAGCAGGTGGCCTCGGAGCACGCCCAGACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSDLSVSPQSTQGH*ARSSRWPRSTPRPL Trigger: GAGGGGTCTGGGCGTGCTCCGAGGCCACCTGCTGCTCCTTGCCCAGTGTCCCTGGGTGCTCTGTGGGGACACAGAGAGGTCACTTGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 90 bp | GGCTTCCAGCAAGCAGGCCAGGGACCGGACGGGACCGGACAGGGCTaGGCTGGCCCTGGGGAGGATTACGGCATTGGATACCGCCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GFQQAGQGPDGTGQG*AGPGEDYGIGYRLI Trigger: GATAAGGCGGTATCCAATGCCGTAATCCTCCCCAGGGCCAGCCCAGCCCTGTCCGGTCCCGTCCGGTCCCTGGCCTGCTTGCTGGAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 90 bp | CCGGGAACTCCATGTGGACGTGGAGGCCGCCCTCCTCTGTGGGCCTaGTGGCCCTGGTGGACATGGACAGGTGGTCCTTCTTGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGTPCGRGGRPPLWA*WPWWTWTGGPSCPG Trigger: TCCTGGGCAAGAAGGACCACCTGTCCATGTCCACCAGGGCCATCAGGCCCACAGAGGAGGGCGGCCTCCACGTCCACATGGAGTTCCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316144.6 ENST00000482511.1 ENST00000495223.1 |
||
| CDS TCA 90 bp | CGCCAGGAAGGCGCCGCAGTCTGGCAGAGGCAGGAACCTCCCAAGTaGCCTCTCTGTGTCCCCACAGAGCACCCAGGGACACTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQEGAAVWQRQEPPK*PLCVPTEHPGTLGK Trigger: CTTGCCCAGTGTCCCTGGGTGCTCTGTGGGGACACAGAGAGGTCACTTGGGAGGTTCCTGCCTCTGCCAGACTGCGGCGCCTTCCTGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGGAGAGCAGGGTCAGGATaGCGCCGAGCAGGAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRGKGACCFGSTWEGRGWRAGSG*RRAGMT Trigger: TGTCATTCCTGCTCGGCGCAATCCTGACCCTGCTCT...CCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CAA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCATGACCATCATGTCCTaGGGGAGCCCCAGGGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRAVGLDSRGKGACCFGMTIMS*GSPRVG Trigger: CCCGACCCTGGGGCTCCCCAAGGACATGATGGTCAT...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CAA 90 bp | TGGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTCGAGGGCTGTGGGTCTaGACTCCAGGGGCAAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WSPRAVGLDSRGKGACCFRGLWV*TPGAKA Trigger: CGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCG...AAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS GCA 90 bp | CTGCAGTCAGATGCCATGGAGACCACGTACCAGAGGCCTGAGAACTaGCGGGGGCTTAGTCACCCGCAGGCCAGGACAGCCAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQSDAMETTYQRPEN*RGLSHPQARTASSR Trigger: CCTGCTGCTGGCTGTCCTGGCCTGCGGGTGACTAAGCCCCCGGCAGTTCTCAGGCCTCTGGTACGTGGTCTCCATGGCATCTGACTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS-3UTR CAA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCGACAGGTGGTCCTTCTaGCCCAGGAAGACCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRAVGLDSRGKGACCFGDRWSF*PRKTLQ Trigger: CTGCAGGGTCTTCCTGGGCAAGAAGGACCACCTGTC...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CAA 90 bp | TCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTGTCAGGGCGCCTCCTaGCTCTCAGGGTTGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRAVGLDSRGKGACCFGCQGAS*LSGLHA Trigger: TGCATGCAACCCTGAGAGCAAGGAGGCGCCCTGACA...GCCAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS GCA 90 bp | AGTCACGGGGCCACTGCCAAGCCACAGCAGAGACTTGTCCTGCCTTaGCTGGACTCGCACCCAAGCCCCTCTGTCCACACTCTGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHGATAKPQQRLVLP*LDSHPSPSVHTLSG Trigger: GCCAGACAGAGTGTGGACAGAGGGGCTTGGGTGCGAGTCCAGGCAAGGCAGGACAAGTCTCTGCTGTGGCTTGGCAGTGGCCCCGTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 90 bp | AGCAGGCCAGGGACCGGACGGGACCGGACAGGGCTGGGCTGGCCCTaGGGAGGATTACGGCATTGGATACCGCCTTATCACTGGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SRPGTGRDRTGLGWP*GGLRHWIPPYHWLY Trigger: ATACAACCAGTGATAAGGCGGTATCCAATGCCGTAATCCTCCCCAGGGCCAGCCCAGCCCTGTCCGGTCCCGTCCGGTCCCTGGCCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 90 bp | GGTACCTTTTCAGCATTGAAGTCAGGCTGCAGCAGAACCTCAGCCTaGGCCGTGGGCGCCCAGAGCAGGGTCAGGATTGCGCCGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTFSALKSGCSRTSA*AVGAQSRVRIAPSR Trigger: CCTGCTCGGCGCAATCCTGACCCTGCTCTGGGCGCCCACGGCTCAGGCTGAGGTTCTGCTGCAGCCTGACTTCAATGCTGAAAAGGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS GCA 90 bp | TCACCAGTCACGGGGCCACTGCCAAGCCACAGCAGAGACTTGTCCTaGCTTGCCTGGACTCGCACCCAAGCCCCTCTGTCCACACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPVTGPLPSHSRDLS*LAWTRTQAPLSTLC Trigger: ACAGAGTGTGGACAGAGGGGCTTGGGTGCGAGTCCAGGCAAGGCAGGACAAGTCTCTGCTGTGGCTTGGCAGTGGCCCCGTGACTGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 90 bp | GAGAACTTTTCAGCATTGAAGTCAGGCTGCAGCAGAACCTCAGCCTaGGCCGTGGGCGCCCAGAGCAGGGTCAGGATTGCGCCGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFSALKSGCSRTSA*AVGAQSRVRIAPSR Trigger: CCTGCTCGGCGCAATCCTGACCCTGCTCTGGGCGCCCACGGCTCAGGCTGAGGTTCTGCTGCAGCCTGACTTCAATGCTGAAAAGTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS TCA 90 bp | CCTGCTCCTGGGCGGAGCAGATGGAAGCGGAAGGCACTTCGGCTCTaGGACTCCGGCCCCCTTGTCCATTGTTTGGCACAATCACTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAPGRSRWKRKALRL*DSGPLVHCLAQSLG Trigger: TCCGAGTGATTGTGCCAAACAATGGACAAGGGGGCCGGAGTCTCAGAGCCGAAGTGCCTTCCGCTTCCATCTGCTCCGCCCAGGAGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 90 bp | GGCTGGCCCTGGGGAGGATTACGGCATTGGATACCGCCTTATCACTaGTTGTATAAGCGTGCAGGGGGCAATGACGCCAGGAAGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GWPWGGLRHWIPPYH*LYKRAGGNDARKAP Trigger: CGGCGCCTTCCTGGCGTCATTGCCCCCTGCACGCTTATACAACCAGTGATAAGGCGGTATCCAATGCCGTAATCCTCCCCAGGGCCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 90 bp | ACAGGTGGTCCTTCTTGCCCAGGAAGACCCTGCAGTCAGATGCCATaGAGACCACGTACCAGAGGCCTGAGAACTGCCGGGGGCTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGGPSCPGRPCSQMP*RPRTRGLRTAGGLV Trigger: GACTAAGCCCCCGGCAGTTCTCAGGCCTCTGGTACGTGGTCTCCATGGCATCTGACTGCAGGGTCTTCCTGGGCAAGAAGGACCACCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCGAGGGCTGTGGGTCTTGACTCCAGGGGCAAAGGCGCCTGCTGCTTTGGAGAACTTTTCAGCATaGAAGTCAGGCTGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPRGLWVLTPGAKAPAALENFSA*KSGCSR Trigger: TCTGCTGCAGCCTGACTTCAATGCTGAAAAGTTCTC...CAAAGCAGCAGGCGCCTTTGCCCCTGGAGTCAAGACCCACAGCCCTCGGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGGGCAAAGGCGCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTGTGCAGCATCTGTTTATaGAATAGAAAGAGACGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQGQRRLLLWLHLGRAGVCSICL*NRKRRP Trigger: GGGACGTCTCTTTCTATTCAATAAACAGATGCTGCA...CACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGCGCCTTTGCCCCTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316144.6 |
||
| CDS TCA 90 bp | TCACACAGCAAGGGGTCTCGGAGTGGCCATGTCTTGGGTGTGAGCTaGGCCCAGGTGGACAGGAACTCATCTTGGGTAGGTCACAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHSKGSRSGHVLGVS*AQVDRNSSWVGHSA Trigger: TGCACTGTGACCTACCCAAGATGAGTTCCTGTCCACCTGGGCTCAGCTCACACCCAAGACATGGCCACTCCGAGACCCCTTGCTGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS GCA 90 bp | TCACAGGTTGGTTTAGGATTAAGCGCAGAGTGGGTCTATAGCACGTaGCTGGCCGGGCACAGAGCAAGCGCCCCAGGAAAGGCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQVGLGLSAEWVYST*LAGHRASAPGKAVV Trigger: GACAACTGCCTTTCCTGGGGCGCTTGCTCTGTGCCCGGCCAGGCACGTGCTATAGACCCACTCTGCGCTTAATCCTAAACCAACCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 72 bp | GCCTGCTGCTTTGGCTCCACCTGGGAAGGGCGGGGGTaGGGCTCCGGAGGTGTCAGGGCGCCTCCTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ACCFGSTWEGRG*GSGGVRAPPCS Trigger: AGAGCAAGGAGGCGCCCTGACACCTCCGGAGCCCCACCCCCGCCCTTCCCAGGTGGAGCCAAAGCAGCAGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316144.6 ENST00000482511.1 |
||
| CDS CCA 72 bp | TTACAGCCGTCCGCCCCCGGGAACTCCATGTGGACGTaGAGGCCGCCCTCCTCTGTGGGCCTGATGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQPSAPGNSMWT*RPPSSVGLMAL Trigger: CAGGGCCATCAGGCCCACAGAGGAGGGCGGCCTCCACGTCCACATGGAGTTCCCGGGGGCGGACGGCTGTAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316144.6 ENST00000482511.1 ENST00000495223.1 |
||
| CDS CCA 72 bp | ACCTGGTTACAGCCGTCCGCCCCCGGGAACTCCATGTaGACGTGGAGGCCGCCCTCCTCTGTGGGCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: TWLQPSAPGNSM*TWRPPSSVGLM Trigger: CATCAGGCCCACAGAGGAGGGCGGCCTCCACGTCCACATGGAGTTCCCGGGGGCGGACGGCTGTAACCAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316144.6 ENST00000482511.1 ENST00000495223.1 |
||
| CDS CCA 72 bp | CAAGCAGGCCAGGGACCGGACGGGACCGGACAGGGCTaGGCTGGCCCTGGGGAGGATTACGGCATTGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: QAGQGPDGTGQG*AGPGEDYGIGY Trigger: GTATCCAATGCCGTAATCCTCCCCAGGGCCAGCCCAGCCCTGTCCGGTCCCGTCCGGTCCCTGGCCTGCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | GCAGAACCTCAGCCTGAGCCGTGGGCGCCCAGAGCAGGGTCAGGATaGCGCCGAGCAGGAATGACATCATCCCCTCCCCTGCCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AEPQPEPWAPRAGSG*RRAGMTSSPPLPSS Trigger: GCTGGAGGGCAGGGGAGGGGATGATGTCATTCCTGCTCGGCGCAATCCTGACCCTGCTCTGGGCGCCCACGGCTCAGGCTGAGGTTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316144.6 ENST00000482511.1 |
||
| CDS GCA 72 bp | GGTCAGGGGCGGGAGTCCTGCCAGGGAGGCCAGCACTaGCAGTCCTCTGGAGTGAGAGTGAGGCAGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GQGRESCQGGQH*QSSGVRVRQEK Trigger: CTTCTCCTGCCTCACTCTCACTCCAGAGGACTGGCAGTGCTGGCCTCCCTGGCAGGACTCCCGCCCCTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 72 bp | CCCTCGGAGCCCACCTTCAGGTACTCGGCATCCACCTaGTTACAGCCGTCCGCCCCCGGGAACTCCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSEPTFRYSAST*LQPSAPGNSMW Trigger: CCACATGGAGTTCCCGGGGGCGGACGGCTGTAACCAGGTGGATGCCGAGTACCTGAAGGTGGGCTCCGAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316144.6 ENST00000482511.1 |
||
| CDS CAA 72 bp | CAGCCTGAGCCGTGGGCGCCCAGAGCAGGGTCAGGATaGCGCCGAGCAGGAATGACATCATCCCCTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QPEPWAPRAGSG*RRAGMTSSPPL Trigger: CAGGGGAGGGGATGATGTCATTCCTGCTCGGCGCAATCCTGACCCTGCTCTGGGCGCCCACGGCTCAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316144.6 ENST00000482511.1 |
||
| CDS TCA 72 bp | GGCGCCGCAGTCTGGCAGAGGCAGGAACCTCCCAAGTaGCCTCTCTGTGTCCCCACAGAGCACCCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GAAVWQRQEPPK*PLCVPTEHPGT Trigger: TGTCCCTGGGTGCTCTGTGGGGACACAGAGAGGTCACTTGGGAGGTTCCTGCCTCTGCCAGACTGCGGCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS GCA 72 bp | AGGGTCACACTGGCAGAGTGTCCAGGGCAGAGCTTGTaGCCCCACACTGTGAGAGAGGCCTGGGCACCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVTLAECPGQSL*PHTVREAWAPL Trigger: GAGGGGTGCCCAGGCCTCTCTCACAGTGTGGGGGCACAAGCTCTGCCCTGGACACTCTGCCAGTGTGACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS GCA 72 bp | ACGGGGCCACTGCCAAGCCACAGCAGAGACTTGTCCTaGCTTGCCTGGACTCGCACCCAAGCCCCTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGPLPSHSRDLS*LAWTRTQAPLS Trigger: GGACAGAGGGGCTTGGGTGCGAGTCCAGGCAAGGCAGGACAAGTCTCTGCTGTGGCTTGGCAGTGGCCCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS GCA 72 bp | GATGCCATGGAGACCACGTACCAGAGGCCTGAGAACTaGCGGGGGCTTAGTCACCCGCAGGCCAGGACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DAMETTYQRPEN*RGLSHPQARTA Trigger: GGCTGTCCTGGCCTGCGGGTGACTAAGCCCCCGGCAGTTCTCAGGCCTCTGGTACGTGGTCTCCATGGCATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 72 bp | GGTAGGGTCACACTGGCAGAGTGTCCAGGGCAGAGCTaGTGCCCCCACACTGTGAGAGAGGCCTGGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GRVTLAECPGQS*CPHTVREAWAP Trigger: GGGTGCCCAGGCCTCTCTCACAGTGTGGGGGCACAAGCTCTGCCCTGGACACTCTGCCAGTGTGACCCTACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | CTTGGCCCCCAGCATCGGGGAAGGGAAGGAGCCGAGGGCTTCTGCTaGTGGCCTCCACTGGTCTTCAGGAGGTTCCAGTTCCCAGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LGPQHRGREGAEGFC*WPPLVFRRFQFPAT Trigger: CGTGGCTGGGAACTGGAACCTCCTGAAGACCAGTGGAGGCCACAAGCAGAAGCCCTCGGCTCCTTCCCTTCCCCGATGCTGGGGGCCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 72 bp | GGCCACTGCCAAGCCACAGCAGAGACTTGTCCTGCCTaGCCTGGACTCGCACCCAAGCCCCTCTGTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GHCQATAETCPA*PGLAPKPLCPH Trigger: GTGTGGACAGAGGGGCTTGGGTGCGAGTCCAGGCAAGGCAGGACAAGTCTCTGCTGTGGCTTGGCAGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | CAGTCACGGGGCCACTGCCAAGCCACAGCAGAGACTTGTCCTGCCTaGCCTGGACTCGCACCCAAGCCCCTCTGTCCACACTCTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QSRGHCQATAETCPA*PGLAPKPLCPHSVW Trigger: CCAGACAGAGTGTGGACAGAGGGGCTTGGGTGCGAGTCCAGGCAAGGCAGGACAAGTCTCTGCTGTGGCTTGGCAGTGGCCCCGTGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | GCACGTGCCTGGCCGGGCACAGAGCAAGCGCCCCAGGAAAGGCAGTaGTCACAATTATCACGTTGTCTCTGGCAGGGGCCCAGCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARAWPGTEQAPQERQ*SQLSRCLWQGPSSH Trigger: GTGGGAGCTGGGCCCCTGCCAGAGACAACGTGATAATTGTGACAACTGCCTTTCCTGGGGCGCTTGCTCTGTGCCCGGCCAGGCACGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 72 bp | TCAGCATTGAAGTCAGGCTGCAGCAGAACCTCAGCCTaGGCCGTGGGCGCCCAGAGCAGGGTCAGGATTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SALKSGCSRTSA*AVGAQSRVRIA Trigger: CGCAATCCTGACCCTGCTCTGGGCGCCCACGGCTCAGGCTGAGGTTCTGCTGCAGCCTGACTTCAATGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316144.6 ENST00000482511.1 |
||
| CDS CCA 72 bp | TTCGGCTCTGAGACTCCGGCCCCCTTGTCCATTGTTTaGCACAATCACTCGGATGTCCCCCAGCCCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FGSETPAPLSIV*HNHSDVPQPRG Trigger: CCCCCTGGGCTGGGGGACATCCGAGTGATTGTGCCAAACAATGGACAAGGGGGCCGGAGTCTCAGAGCCGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 72 bp | GGAGGATGGAGAGACTTCAGGTACTCGGCATCCACCTaGTTACAGCCGTCCGCCCCCGGGAACTCCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGWRDFRYSAST*LQPSAPGNSMW Trigger: CCACATGGAGTTCCCGGGGGCGGACGGCTGTAACCAGGTGGATGCCGAGTACCTGAAGTCTCTCCATCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000495223.1 |
||
| CDS CAA 90 bp | GCAGATGGAAGCGGAAGGCACTTCGGCTCTGAGACTCCGGCCCCCTaGTCCATTGTTTGGCACAATCACTCGGATGTCCCCCAGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ADGSGRHFGSETPAP*SIVWHNHSDVPQPR Trigger: CCTGGGCTGGGGGACATCCGAGTGATTGTGCCAAACAATGGACAAGGGGGCCGGAGTCTCAGAGCCGAAGTGCCTTCCGCTTCCATCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 72 bp | GGGCGGAGCAGATGGAAGCGGAAGGCACTTCGGCTCTaGGACTCCGGCCCCCTTGTCCATTGTTTGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: GRSRWKRKALRL*DSGPLVHCLAQ Trigger: TTGTGCCAAACAATGGACAAGGGGGCCGGAGTCTCAGAGCCGAAGTGCCTTCCGCTTCCATCTGCTCCGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 72 bp | TCCTCTGGAGTGAGAGTGAGGCAGGAGAAGAGGGCCTaGACGCAGGGAGCCCAAGGGCGTCCTAGAACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSGVRVRQEKRA*TQGAQGRPRTK Trigger: TTTGGTTCTAGGACGCCCTTGGGCTCCCTGCGTCCAGGCCCTCTTCTCCTGCCTCACTCTCACTCCAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 72 bp | CAGCATCGGGGAAGGGAAGGAGCCGAGGGCTTCTGCTaGTGGCCTCCACTGGTCTTCAGGAGGTTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QHRGREGAEGFC*WPPLVFRRFQF Trigger: GAACTGGAACCTCCTGAAGACCAGTGGAGGCCACAAGCAGAAGCCCTCGGCTCCTTCCCTTCCCCGATGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 72 bp | GGCACTTCGGCTCTGAGACTCCGGCCCCCTTGTCCATaGTTTGGCACAATCACTCGGATGTCCCCCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTSALRLRPPCP*FGTITRMSPSP Trigger: TGGGCTGGGGGACATCCGAGTGATTGTGCCAAACAATGGACAAGGGGGCCGGAGTCTCAGAGCCGAAGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | TGGCCCTGGGGAGGATTACGGCATTGGATACCGCCTTATCACTGGTaGTATAAGCGTGCAGGGGGCAATGACGCCAGGAAGGCGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPWGGLRHWIPPYHW*YKRAGGNDARKAPQ Trigger: CTGCGGCGCCTTCCTGGCGTCATTGCCCCCTGCACGCTTATACAACCAGTGATAAGGCGGTATCCAATGCCGTAATCCTCCCCAGGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 72 bp | CATCCTGGGTCCGGCTGTAGAGCTGCACCATGGTGCTaGGGGCCCCCTCCAGCTCCTTGTAGATGTAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPGSGCRAAPWC*GPPPAPCRCKG Trigger: TCCTTTACATCTACAAGGAGCTGGAGGGGGCCCTCAGCACCATGGTGCAGCTCTACAGCCGGACCCAGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316144.6 ENST00000482511.1 |
||
| CDS TCA 72 bp | ACAGCAAGGGGTCTCGGAGTGGCCATGTCTTGGGTGTaGGCTGAGCCCAGGTGGACAGGAACTCATCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TARGLGVAMSWV*AEPRWTGTHLG Trigger: CCCAAGATGAGTTCCTGTCCACCTGGGCTCAGCTCACACCCAAGACATGGCCACTCCGAGACCCCTTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 72 bp | AGCGGAAGGCACTTCGGCTCTGAGACTCCGGCCCCCTaGTCCATTGTTTGGCACAATCACTCGGATGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGRHFGSETPAP*SIVWHNHSDVP Trigger: GGGGACATCCGAGTGATTGTGCCAAACAATGGACAAGGGGGCCGGAGTCTCAGAGCCGAAGTGCCTTCCGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 72 bp | AAGGGGTCTCGGAGTGGCCATGTCTTGGGTGTGAGCTaGGCCCAGGTGGACAGGAACTCATCTTGGGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: KGSRSGHVLGVS*AQVDRNSSWVG Trigger: ACCTACCCAAGATGAGTTCCTGTCCACCTGGGCTCAGCTCACACCCAAGACATGGCCACTCCGAGACCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 72 bp | CAGGAAAGGCAGTTGTCACAATTATCACGTTGTCTCTaGCAGGGGCCCAGCTCCCACCCACCACAGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QERQLSQLSRCL*QGPSSHPPQDS Trigger: GCTGTCCTGTGGTGGGTGGGAGCTGGGCCCCTGCCAGAGACAACGTGATAATTGTGACAACTGCCTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | CCATGTCTTGGGTGTGAGCTGAGCCCAGGTGGACAGGAACTCATCTaGGGTAGGTCACAGTGCAACTGTGAGCCTCAGTTCCCAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PCLGCELSPGGQELI*GRSQCNCEPQFPAV Trigger: CACAGCTGGGAACTGAGGCTCACAGTTGCACTGTGACCTACCCAAGATGAGTTCCTGTCCACCTGGGCTCAGCTCACACCCAAGACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 72 bp | ACAGGGCTGGGCTGGCCCTGGGGAGGATTACGGCATTaGATACCGCCTTATCACTGGTTGTATAAGCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGLGWPWGGLRH*IPPYHWLYKRA Trigger: TGCACGCTTATACAACCAGTGATAAGGCGGTATCCAATGCCGTAATCCTCCCCAGGGCCAGCCCAGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CCA 72 bp | TGGGGAGGATTACGGCATTGGATACCGCCTTATCACTaGTTGTATAAGCGTGCAGGGGGCAATGACGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WGGLRHWIPPYH*LYKRAGGNDAR Trigger: CCTGGCGTCATTGCCCCCTGCACGCTTATACAACCAGTGATAAGGCGGTATCCAATGCCGTAATCCTCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 72 bp | GGAGGATTACGGCATTGGATACCGCCTTATCACTGGTaGTATAAGCGTGCAGGGGGCAATGACGCCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GGLRHWIPPYHW*YKRAGGNDARK Trigger: CTTCCTGGCGTCATTGCCCCCTGCACGCTTATACAACCAGTGATAAGGCGGTATCCAATGCCGTAATCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS TCA 72 bp | GGTCACAGTGCAACTGTGAGCCTCAGTTCCCAGCTGTaGAGTGGGTGCAGTAATGATCCATTCACAGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GHSATVSLSSQL*SGCSNDPFTGW Trigger: CCAACCTGTGAATGGATCATTACTGCACCCACTTCACAGCTGGGAACTGAGGCTCACAGTTGCACTGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | TGCTTCATTCTTTCCTTGCTTTGTTTGTGTGTTTTGTCCAATTCTTaGTTCAAAATGCCAAGAACCTGGACACCCTCCACTGGTAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: CFILSLLCLCVLSNS*FKMPRTWTPSTGNV Trigger: CACGTTACCAGTGGAGGGTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGACAAAACACACAAACAAAGCAAGGAAAGAATGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||
| CDS CAA 90 bp | TTCTGCTTTTGTTGCTTCATTCTTTCCTTGCTTTGTTTGTGTGTTTaGTCCAATTCTTTGTTCAAAATGCCAAGAACCTGGACACCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FCFCCFILSLLCLCV*SNSLFKMPRTWTPS Trigger: GGAGGGTGTCCAGGTTCTTGGCATTTTGAACAAAGAATTGGACAAAACACACAAACAAAGCAAGGAAAGAATGAAGCAACAAAAGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482511.1 |
||