Pregenerated sensors for LCN12 (Homo sapiens)
Ensembl gene IDs: ENSG00000184925Ensembl transcript IDs: ENST00000371632.7, ENST00000371633.8, ENST00000463714.2, ENST00000466277.5, ENST00000470501.5, ENST00000471615.6, ENST00000476751.5, ENST00000480204.1, ENST00000484304.1, ENST00000491316.5, ENST00000491603.5, ENST00000492820.5, ENST00000494713.5, ENST00000495410.1, ENST00000496895.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTTCCTTCAACAGACGCTaGCCTGGGGTGACCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: AWCIYSGLRAEEGRARTASFNRR*PGVTSQ Trigger: CTGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGA...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371632.7 |
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| 3UTR CCA 72 bp | GGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTaGCCTGGGGTGACCAGCCTCGCCCTCCCACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: GRTGAASSFNRR*PGVTSLALPQE Trigger: TTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| 3UTR CCA 72 bp | GACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTaGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: DRSCFILQQTLA*GDQPRPPTRRV Trigger: GACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | CCTGGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTGGGGGCCGCGACGCTGGCCTGGGGTaGCCAGCCTCGCCCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGVTSLALPQEESGLGGRDAGLG*PASPSH Trigger: GTGGGAGGGCGAGGCTGGTCACCCCAGGCCAGCGTC...GCGGCCCCCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | GGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGCACCGTGGTCCACAGTaGACTGCCCAGGCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLGRTGAASSFNRRWPGVHRGPQ*TAQAGL Trigger: CAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTG...CACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | TGGCCTGGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTGGGGGCTGGTCCACAGTGAACTaGCCAGGCTGGGCTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: WPGVTSLALPQEESGLGGWSTVN*PGWAAG Trigger: ACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCA...GCCCCCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCCTGGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTGGCAACAGACGCTGGCCTaGGGTGACCAGCCTCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TLAWGDQPRPPTRRVRPWQQTLA*GDQPRP Trigger: AGGGCGAGGCTGGTCACCCCAGGCCAGCGTCTGTTG...CCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCAGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGGTCCACAGTGAACTaGCCAGGCTGGGCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGWAGQELLHPSTDAGLGWSTVN*PGWAAG Trigger: ACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCA...CCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | GGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGGCAGCAACCAGCTCCTaGCCACACCGTGGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGRTGAASSFNRRWPGVAATSS*PHRGPQ Trigger: CTGTGGACCACGGTGTGGGCAGGAGCTGGTTGCTGC...CACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | GCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGACCCCAGGCAGATGAACTaGTCCAGCGTCCCGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: AGPDRSCFILQQTLAWGDPRQMN*SSVPGG Trigger: GCCTCCCGGGACGCTGGACCAGTTCATCTGCCTGGG...GTCACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCCTGGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTGGAGAAGAGTCAGGCCTTaGGGGCCGCGGCTGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLAWGDQPRPPTRRVRPWRRVRP*GPRLSE Trigger: CTCAGACAGCCGCGGCCCCCAAGGCCTGACTCTTCT...CCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCAGCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | CGCTGGCCTGGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTGGGCTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RWPGVTSLALPQEESGLGLPRLG*RYQHIR Trigger: TCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAG...CCCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGTCCTTCAACAGACGCTaGCCTGGGGTGACCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGRTGAASSFNRRWPGVSFNRR*PGVTSQ Trigger: CTGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGA...CACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371632.7 |
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| CDS-3UTR GCA 90 bp | GGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGCTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGA | + |
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Preference number: 4 (lower is better) Translates to: GLGRTGAASSFNRRWPGVLPRLG*RYQHIR Trigger: TCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAG...CACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | GGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGGGGCCGGACAGGAGCTaGTTCATCCTTCAACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: GLGRTGAASSFNRRWPGVGPDRS*FILQQT Trigger: CGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCC...CACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGCGTGTGTCCACACCGTaGTCCACAGTGAACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGWAGQELLHPSTDAGLGRVSTP*STVNCP Trigger: TGGGCAGTTCACTGTGGACCACGGTGTGGACACACG...CCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371632.7 |
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| CDS-3UTR GCA 90 bp | GCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGACGGGCCGGACAGGAGCTaGTTCATCCTTCAACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: AGPDRSCFILQQTLAWGDGPDRS*FILQQT Trigger: CGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCC...GTCACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTCCCTGTGCTCCGGCCTaGAGCTGTTGCCCGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAPCAPA*SCCPPG Trigger: GCCTGGCGGGCAACAGCTTCAGGCCGGAGCACAGGG...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | GGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGTGCATGTGTCACAGTGCTaGCCTCGAGTCATCGCATTC | + |
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Preference number: 4 (lower is better) Translates to: GLGRTGAASSFNRRWPGVHVSQC*PRVIAF Trigger: GAATGCGATGACTCGAGGCCAGCACTGTGACACATG...CACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCCTGGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTGGCATGTGTCACAGTGCTaGCCTCGAGTCATCGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TLAWGDQPRPPTRRVRPWHVSQC*PRVIAF Trigger: GAATGCGATGACTCGAGGCCAGCACTGTGACACATG...CCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCAGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGCACCGTGGTCCACAGTaGACTGCCCAGGCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVHRGPQ*TAQAGL Trigger: CAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTG...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACACACCGTGGTCCACAGTaGACTGCCCAGGCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTHRGPQ*TAQAGL Trigger: CAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTG...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGCTCTGCCCAGGCAGATaGACTGGTCCAGCGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVLCPGR*TGPASR Trigger: CCGGGACGCTGGACCAGTTCATCTGCCTGGGCAGAG...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACACTCTGCCCAGGCAGATaGACTGGTCCAGCGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTLCPGR*TGPASR Trigger: CCGGGACGCTGGACCAGTTCATCTGCCTGGGCAGAG...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGGACGCTGGCCTGGGGTaGCCAGCCAGTCACATCTGG | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVDAGLG*PASHIW Trigger: CCAGATGTGACTGGCTGGTCACCCCAGGCCAGCGTC...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS-3UTR TCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGACGCTGGCCTGGGGTaGCCAGCCAGTCACATCTGG | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTADAGLG*PASHIW Trigger: CCAGATGTGACTGGCTGGTCACCCCAGGCCAGCGTC...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACACCCAGGCAGATGAACTaGTCCAGCGTCCCGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTPRQMN*SSVPGG Trigger: GCCTCCCGGGACGCTGGACCAGTTCATCTGCCTGGG...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTGGGGACCTCCAGTCACATCTaGGAAGACGATGTTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: QGWAGQELLHPSTDAGLGTSSHI*EDDVVI Trigger: GATGACAACATCGTCTTCCCAGATGTGACTGGAGGT...CCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACATGGTCCACAGTGAACTaGCCAGGCTGGGCTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTWSTVN*PGWAAG Trigger: ACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCA...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACACCTCATCCTGGCAGCTaGTGGGCCCACAGGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTPHPGS*WAHRDR Trigger: TCTGTCCCTGTGGGCCCAGCAGCTGCCAGGATGAGG...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCCTGCTCGTGTGTCTaGGGGACAGCATCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTACSCV*GTASGR Trigger: TCGCCCTGATGCTGTCCCGCAGACACACGAGCAGGC...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTCCGGGCTCCACACCGTaGTCCACAGTGAACTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAPGSTP*STVNCP Trigger: TGGGCAGTTCACTGTGGACCACGGTGTGGAGCCCGG...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR GCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGTTTCCTTGGAAGCTCTaGATCGGGGGCGGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVFPWKL*IGGGSG Trigger: GCCACTCCCGCCCCCGATGCAGAGCTTCCAAGGAAA...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGGTGAACTGCCCAGGCTaGGCTGCCGGTATCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVVNCPG*AAGIST Trigger: TGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCAC...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGAACTGCCCAGGCTaGGCTGCCGGTATCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAVNCPG*AAGIST Trigger: TGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCAC...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGCAACAGACGCTGGCCTaGGGTGACCAGCCAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVQQTLA*GDQPVT Trigger: TGTGACTGGCTGGTCACCCCAGGCCAGCGTCTGTTG...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACACAACAGACGCTGGCCTaGGGTGACCAGCCAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTQQTLA*GDQPVT Trigger: TGTGACTGGCTGGTCACCCCAGGCCAGCGTCTGTTG...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACATCCTTCAACAGACGCTaGCCTGGGGTGACCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTSFNRR*PGVTSQ Trigger: CTGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGA...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTCTCCTGCCCACACCGTaGTCCACAGTGAACTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTALLPTP*STVNCP Trigger: TGGGCAGTTCACTGTGGACCACGGTGTGGGCAGGAG...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTTCCTTCAACAGACGCTaGCCTGGGGTGACCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTASFNRR*PGVTSL Trigger: GAGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGA...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGTTCAGGTTTGAGAGCTaGGGAGGGCAGAGCTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVFRFES*GGQSSH Trigger: GTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAA...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTTTCAGGTTTGAGAGCTaGGGAGGGCAGAGCTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAFRFES*GGQSSH Trigger: GTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAA...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR TCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTCAAAAGTTGCGGTaGAAGCGTTCAGCAGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTAQKLR*KRSAAP Trigger: GGGCGCTGCTGAACGCTTTCACCGCAACTTTTGAGC...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR GCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTCTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGA | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTALPRLG*RYQHIR Trigger: TCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAG...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGGGCCGGACAGGAGCTaGTTCATCCTTCAACAGACG | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAGPDRS*FILQQT Trigger: CGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCC...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTTGGGGTCTGGGCCTaGAGGACTTTCAGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAVGVWA*RTFSKE Trigger: CTCCTTGCTGAAAGTCCTGCAGGCCCAGACCCCAAC...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR GCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGACCATGTGTCACAGTaGTGGCCTCGAGTCATCGCA | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTADHVSQ*WPRVIA Trigger: TGCGATGACTCGAGGCCAGCACTGTGACACATGGTC...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGACCATGTGTCACAGTaGTGGCCTCGAGTCATCGCA | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTDHVSQ*WPRVIA Trigger: TGCGATGACTCGAGGCCAGCACTGTGACACATGGTC...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTTGGAACTGGTTTCCTTaGAAGCTCTGCATCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAWNWFP*KLCIGG Trigger: GCCCCCGATGCAGAGCTTCCAAGGAAACCAGTTCCA...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGCATGTGTCACAGTGCTaGCCTCGAGTCATCGCATTC | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVHVSQC*PRVIAF Trigger: GAATGCGATGACTCGAGGCCAGCACTGTGACACATG...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS-3UTR CCA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACACATTCCCCCTGGAACTaGTTTCCTTGGAAGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: WAWCIYSGLRAEEGRARTHSPWN*FPWKLC Trigger: GCAGAGCTTCCAAGGAAACCAGTTCCAGGGGGAATG...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | TGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTGTGCCAGCCAGTCACATCTaGGAAGACGATGTTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: WCIYSGLRAEEGRARTAVPASHI*EDDVVI Trigger: GATGACAACATCGTCTTCCCAGATGTGACTGGCTGG...CACAGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTCCAGCCAGTCACATCTaGGAAGACGATGTTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTAPASHI*EDDVVI Trigger: GATGACAACATCGTCTTCCCAGATGTGACTGGCTGG...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS-3UTR CCA 90 bp | GCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACAGCTACGAACCATTCCCCCTaGAACTGGTTTCCTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AWCIYSGLRAEEGRARTATNHSP*NWFPWK Trigger: CTTCCAAGGAAACCAGTTCCAGGGGGAATGGTTCGT...AGCTGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS CCA 90 bp | GGCTGGGCCGGCGCCAGGGACACTGGCAAGAACCAGAGCCTACTCTaGGTCTGGCAGGGACATGGTGACCCTGGCCAGTGGCTGTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GWAGARDTGKNQSLL*VWQGHGDPGQWLCG Trigger: GCCGCACAGCCACTGGCCAGGGTCACCATGTCCCTGCCAGACCCAGAGTAGGCTCTGGTTCTTGCCAGTGTCCCTGGCGCCGGCCCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495410.1 |
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| CDS CCA 90 bp | GGCCTCTGTAGGAGGGGACAGGTGGAGGCGGAAGGCTCCGGAAGCTaGCAGGTCCATGCTGAGGTGGGCCCCTCAGGAGATTTCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GLCRRGQVEAEGSGS*QVHAEVGPSGDFSH Trigger: GTGGCTGAAATCTCCTGAGGGGCCCACCTCAGCATGGACCTGCCAGCTTCCGGAGCCTTCCGCCTCCACCTGTCCCCTCCTACAGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000463714.2 ENST00000491603.5 ENST00000494713.5 |
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| CDS CCA 90 bp | GCCAGCACCCCGTCCCTCCCTCCTGTGACTGGCTTACCCACACCGTaGTCCACAGTGAACTGCCCAGGCTGGGCTGCCGGTATCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ASTPSLPPVTGLPTP*STVNCPGWAAGIST Trigger: TGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGGTAAGCCAGTCACAGGAGGGAGGGACGGGGTGCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466277.5 |
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| CDS CCA 90 bp | GCTGGGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTGGCCTaGGGTGACCAGCCTGGTGGGGGAGATGGAGTCGGGATGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGPDRSCFILQQTLA*GDQPGGGDGVGMED Trigger: GTCCTCCATCCCGACTCCATCTCCCCCACCAGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470501.5 |
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| CDS TCA 90 bp | AGACGATGTTGTCATCCGAGAGGCCCTGAGCTCTGCCCAGGCAGATaGACTGGTCCAGCGTCCCGGGAGGCAGCAACCAGCTCCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RRCCHPRGPELCPGR*TGPASREAATSSCP Trigger: TGGGCAGGAGCTGGTTGCTGCCTCCCGGGACGCTGGACCAGTTCATCTGCCTGGGCAGAGCTCAGGGCCTCTCGGATGACAACATCGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000463714.2 ENST00000470501.5 ENST00000471615.6 ENST00000476751.5 ENST00000480204.1 ENST00000491316.5 ENST00000491603.5 ENST00000492820.5 ENST00000494713.5 ENST00000496895.1 |
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| CDS TCA 90 bp | AGACGATGTTGTCATCCGAGAGGCCCTGAGCTCTGCCCAGGCAGATaGACTGGTCCAGCGTCCCGGGAGGCAGCAACCAGCTCCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRCCHPRGPELCPGR*TGPASREAATSSCL Trigger: CAGGCAGGAGCTGGTTGCTGCCTCCCGGGACGCTGGACCAGTTCATCTGCCTGGGCAGAGCTCAGGGCCTCTCGGATGACAACATCGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466277.5 |
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| CDS GCA 90 bp | CCCGGGCTCCACACCGTGGTCCACAGTGAACTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGACCATGTGTCACAGTGCTGGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PGLHTVVHSELPRLG*RYQHIRPCVTVLAS Trigger: CGAGGCCAGCACTGTGACACATGGTCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGAGCCCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371633.8 ENST00000470501.5 |
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| CDS TCA 90 bp | GGGACAGGTGGAGGCGGAAGGCTCCGGAAGCTGGCAGGTCCATGCTaGGGTGGGCCCCTCAGGAGATTTCAGCCACTTATTCAGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GTGGGGRLRKLAGPC*GGPLRRFQPLIQRD Trigger: GTCCCTCTGAATAAGTGGCTGAAATCTCCTGAGGGGCCCACCTCAGCATGGACCTGCCAGCTTCCGGAGCCTTCCGCCTCCACCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000463714.2 ENST00000491603.5 ENST00000494713.5 |
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| CDS GCA 90 bp | GCTCCTGCCCACACCGTGGTCCACAGTGAACTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGACCATGTGTCACAGTGCTGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: APAHTVVHSELPRLG*RYQHIRPCVTVLAS Trigger: CGAGGCCAGCACTGTGACACATGGTCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGGCAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000471615.6 ENST00000492820.5 ENST00000496895.1 |
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| CDS GCA 90 bp | GCTCCTGCCCACACCGTGGTCCACAGTGAACTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGACCATGTGTCACAGTGCTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: APAHTVVHSELPRLG*RYQHIRPCVTVLAS Trigger: AGAGGCCAGCACTGTGACACATGGTCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGGCAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000463714.2 ENST00000491603.5 ENST00000494713.5 |
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| CDS GCA 90 bp | TCCACTGCTCTTCCTCCGTTCCCGGAAAACTCCCGGCCTGTCCTCTaGTCACCCTCCCCTCTCTCTTCCCACTCTCCGGGCAAAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: STALPPFPENSRPVL*SPSPLSSHSPGKDL Trigger: AAGGTCTTTGCCCGGAGAGTGGGAAGAGAGAGGGGAGGGTGAGCAGAGGACAGGCCGGGAGTTTTCCGGGAACGGAGGAAGAGCAGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484304.1 |
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| CDS GCA 90 bp | TCGTGTGTCCACACCGTGGTCCACAGTGAACTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGACCATGTGTCACAGTGCTGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SCVHTVVHSELPRLG*RYQHIRPCVTVLAS Trigger: CGAGGCCAGCACTGTGACACATGGTCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGACACACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000491316.5 |
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| CDS GCA 90 bp | GTGTGCAGGTGTGTGCAGGTGTGTGCAGACCAGCACGTGTGCCTGTaGACGGGTAGACAGCATGTGTGCCAGTGTGAGTGGCGTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VCRCVQVCADQHVCL*TGRQHVCQCEWRVC Trigger: ACACACACGCCACTCACACTGGCACACATGCTGTCTACCCGTGCACAGGCACACGTGCTGGTCTGCACACACCTGCACACACCTGCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470501.5 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGGGTGACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTGGGGGCTGCATTTATTCAGGTTaGAGAGCTGAGGAGGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: WPGVTSLALPQEESGLGGCIYSG*RAEEGR Trigger: TCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCA...GCCCCCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTCACCCCAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471615.6 |
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| CDS GCA 90 bp | TGGCTTACCCACACCGTGGTCCACAGTGAACTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGACCATGTGTCACAGTGCTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLTHTVVHSELPRLG*RYQHIRPCVTVLAS Trigger: AGAGGCCAGCACTGTGACACATGGTCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGGTAAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466277.5 |
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| CDS GCA 90 bp | TCGTGTGTCCACACCGTGGTCCACAGTGAACTGCCCAGGCTGGGCTaGCGGTATCAGCACATAAGACCATGTGTCACAGTGCTGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SCVHTVVHSELPRLG*RYQHIRPCVTVLAS Trigger: AGAGGCCAGCACTGTGACACATGGTCTTATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGACACACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476751.5 |
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| CDS CCA 90 bp | TACTGCCCAGCATGCCTGCAGGTGAACCATGTTACCAGTCACATCTaGGAAGACGATGTTGTCATCCGAGAGGCCCTGAGCTCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YCPACLQVNHVTSHI*EDDVVIREALSSAQ Trigger: CTGGGCAGAGCTCAGGGCCTCTCGGATGACAACATCGTCTTCCCAGATGTGACTGGTAACATGGTTCACCTGCAGGCATGCTGGGCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000463714.2 ENST00000470501.5 ENST00000492820.5 ENST00000496895.1 |
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| CDS-3UTR CAA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACACTGGAACTGGTTTCCTaGGAAGCTCTGCATCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WAWCIYSGLRAEEGRARTLELVS*EALHRG Trigger: CCCCCGATGCAGAGCTTCCAAGGAAACCAGTTCCAG...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371633.8 |
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| CDS-3UTR CAA 90 bp | TGGGCTTGGTGCATTTATTCAGGTTTGAGAGCTGAGGAGGGCAGAGCTCGCACATGCATTTATTCAGGTTaGAGAGCTGAGGAGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WAWCIYSGLRAEEGRARTCIYSG*RAEEGR Trigger: TCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCA...TGTGCGAGCTCTGCCCTCCTCAGCTCTCAAACCTGAATAAATGCACCAAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000371633.8 ENST00000471615.6 |
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| CDS TCA 72 bp | CACCACCCGGGTCTCCTCTCTGTCCGCCCCGGGCTCTaGGGCGGCACAGACGTCACATCCCTGTGGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HHPGLLSVRPGL*GGTDVTSLWAS Trigger: GCTGGCCCACAGGGATGTGACGTCTGTGCCGCCTCAGAGCCCGGGGCGGACAGAGAGGAGACCCGGGTGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466277.5 |
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| CDS CCA 72 bp | CTGTTGCCCGCCAGGCCCAGGACGAACCATTCCCCCTaGAACTACAGAGGCGGTGGTGGGCAGGGGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPARPRTNHSP*NYRGGGGQGRR Trigger: CCGCCGCCCCTGCCCACCACCGCCTCTGTAGTTCCAGGGGGAATGGTTCGTCCTGGGCCTGGCGGGCAACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495410.1 |
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| CDS CCA 72 bp | GACCAGCCTCGCCCTCCCACAAGAAGAGTCAGGCCTTaGGGGCCGCGGCTGTCTGAGTGGTCAGGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DQPRPPTRRVRP*GPRLSEWSGWG Trigger: GCCCCAGCCTGACCACTCAGACAGCCGCGGCCCCCAAGGCCTGACTCTTCTTGTGGGAGGGCGAGGCTGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000466277.5 ENST00000471615.6 ENST00000476751.5 ENST00000480204.1 ENST00000491316.5 ENST00000494713.5 |
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| CDS TCA 72 bp | GAACCAGAGCCTACTCTGGGTCTGGCAGGGACATGGTaGCCCTGGCCAGTGGCTGTGCGGCCTTCCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPEPTLGLAGTW*PWPVAVRPSRA Trigger: GGCTCGGGAAGGCCGCACAGCCACTGGCCAGGGTCACCATGTCCCTGCCAGACCCAGAGTAGGCTCTGGTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495410.1 |
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| CDS CCA 72 bp | AGGAGGGGACAGGTGGAGGCGGAAGGCTCCGGAAGCTaGCAGGTCCATGCTGAGGTGGGCCCCTCAGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRGQVEAEGSGS*QVHAEVGPSGD Trigger: ATCTCCTGAGGGGCCCACCTCAGCATGGACCTGCCAGCTTCCGGAGCCTTCCGCCTCCACCTGTCCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000463714.2 ENST00000476751.5 ENST00000491603.5 ENST00000494713.5 |
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| CDS CCA 72 bp | CCGTCCCTCCCTCCTGTGACTGGCTTACCCACACCGTaGTCCACAGTGAACTGCCCAGGCTGGGCTGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLPPVTGLPTP*STVNCPGWAAG Trigger: ACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGGTAAGCCAGTCACAGGAGGGAGGGACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466277.5 |
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| CDS CCA 72 bp | CAGCTTCTGGACCCCTCACAGAGCAGTGCTCCTGGCTaGGCCGGCGCCAGGGACACTGGCAAGAACCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QLLDPSQSSAPG*AGARDTGKNQS Trigger: GCTCTGGTTCTTGCCAGTGTCCCTGGCGCCGGCCCAGCCAGGAGCACTGCTCTGTGAGGGGTCCAGAAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495410.1 |
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| CDS TCA 72 bp | GCCAGCCTGCTCGTGTGTCCACACCGTGGTCCACAGTaGACTGCCCAGGCTGGGCTGCCGGTATCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: ASLLVCPHRGPQ*TAQAGLPVSAH Trigger: ATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGACACACGAGCAGGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371632.7 ENST00000476751.5 ENST00000491316.5 |
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| CDS TCA 72 bp | GCAGCAACCAGCTCCTGCCCACACCGTGGTCCACAGTaGACTGCCCAGGCTGGGCTGCCGGTATCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: AATSSCPHRGPQ*TAQAGLPVSAH Trigger: ATGTGCTGATACCGGCAGCCCAGCCTGGGCAGTTCACTGTGGACCACGGTGTGGGCAGGAGCTGGTTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000463714.2 ENST00000471615.6 ENST00000491603.5 ENST00000492820.5 ENST00000494713.5 ENST00000496895.1 |
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| CDS TCA 72 bp | GGAGGCGGAAGGCTCCGGAAGCTGGCAGGTCCATGCTaGGGTGGGCCCCTCAGGAGATTTCAGCCACTTATT | + |
|
Preference number: 6 (lower is better) Translates to: GGGRLRKLAGPC*GGPLRRFQPLI Trigger: AATAAGTGGCTGAAATCTCCTGAGGGGCCCACCTCAGCATGGACCTGCCAGCTTCCGGAGCCTTCCGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000463714.2 ENST00000491603.5 ENST00000494713.5 |
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| CDS CCA 72 bp | GGCCGGACAGGAGCTGCTTCATCCTTCAACAGACGCTaGCCTGGGGTGACCAGCCAGTCACATCTGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRTGAASSFNRR*PGVTSQSHLGR Trigger: TCTTCCCAGATGTGACTGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGTCCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371632.7 ENST00000371633.8 |
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| CDS CCA 72 bp | GGAGCCCAGCATGGGTCTGTGCACTTGGCAGGGGGTTaGGGGCTGGGTAGGTGGGAGATTGAACTATCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GAQHGSVHLAGG*GLGRWEIELSV Trigger: TACAGATAGTTCAATCTCCCACCTACCCAGCCCCCAACCCCCTGCCAAGTGCACAGACCCATGCTGGGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466277.5 |
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| CDS GCA 72 bp | CGTGTGTGTAAGTGGGTGTTCGCATGTGGAGGCATGTaGCAGTCTGTACACGTTTGCTCATGCGTGAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RVCKWVFACGGM*QSVHVCSCVSV Trigger: CACACTCACGCATGAGCAAACGTGTACAGACTGGCACATGCCTCCACATGCGAACACCCACTTACACACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470501.5 |
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