RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LCMT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000168806

Ensembl transcript IDs: ENST00000305641.7, ENST00000567039.1

Found 394 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCTCACTCGGCAGTGCCGCCCCTCCTGCTCTCCAAATCCTCCTaGACTGAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCC +
Preference number: 1 (lower is better)
Translates to: LAHSAVPPLLLSKSS*TENNVWAQEDRGVA
Trigger: GGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGTGCAGGAGGATTTGGAGAGCAGGAGGGGCGGCACTGCCGAGTGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp AGACCTCCAGCAATAAGGGCTCCCCCTTGCCAAGTGCAGGCACTGTaGGAATGCCGGGCTTCAGGTACTTCTCCCTCCACTGGGATCCTG +
Preference number: 1 (lower is better)
Translates to: RPPAIRAPPCQVQAL*ECRASGTSPSTGIL
Trigger: CAGGATCCCAGTGGAGGGAGAAGTACCTGAAGCCCGGCATTCTCACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATTGCTGGAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp GTCTGGGCTCAAGAAGACAGAGGCGTGGCCATATCTCTTCAGGTTTaGGACCTGGCCCTCGCTACTGACTACGCTGGCAGGGAATACCCC +
Preference number: 1 (lower is better)
Translates to: VWAQEDRGVAISLQV*DLALATDYAGREYP
Trigger: GGGGTATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGTCTTCTTGAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp CTCAAGAAGACAGAGGCGTGGCCATATCTCTTCAGGTTTGGGACCTaGCCCTCGCTACTGACTACGCTGGCAGGGAATACCCCTGAAGGC +
Preference number: 1 (lower is better)
Translates to: LKKTEAWPYLFRFGT*PSLLTTLAGNTPEG
Trigger: GCCTTCAGGGGTATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGTCTTCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp AGGCGTGGCCATATCTCTTCAGGTTTGGGACCTGGCCCTCGCTACTaGCTACGCTGGCAGGGAATACCCCTGAAGGCGAAGCAGGATTTA +
Preference number: 1 (lower is better)
Translates to: RRGHISSGLGPGPRY*LRWQGIPLKAKQDL
Trigger: TAAATCCTGCTTCGCCTTCAGGGGTATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp GCAGGCACTGTGAGAATGCCGGGCTTCAGGTACTTCTCCCTCCACTaGGATCCTGACCCAAGCCATTGTCCCTACATGGAGGAAATGCCA +
Preference number: 1 (lower is better)
Translates to: AGTVRMPGFRYFSLH*DPDPSHCPYMEEMP
Trigger: TGGCATTTCCTCCATGTAGGGACAATGGCTTGGGTCAGGATCCCAGTGGAGGGAGAAGTACCTGAAGCCCGGCATTCTCACAGTGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp CCTCCTGCACTGAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTaGCCATATCTCTTCAGGTTTGGGACCTGGCCCTCGCTACTGACT +
Preference number: 1 (lower is better)
Translates to: PPALRITSGLKKTEA*PYLFRFGTWPSLLT
Trigger: AGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGTGCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 90 bp TCCACTGGGATCCTGACCCAAGCCATTGTCCCTACATGGAGGAAATaGCAGTCACTTAGTACAGGTTCCACCACGCTTCGACCCCCATAC +
Preference number: 1 (lower is better)
Translates to: STGILTQAIVPTWRK*QSLSTGSTTLRPPY
Trigger: GTATGGGGGTCGAAGCGTGGTGGAACCTGTACTAAGTGACTGGCATTTCCTCCATGTAGGGACAATGGCTTGGGTCAGGATCCCAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp GTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGTCTTGTCATaGTGTGATAAAGGCGTCCATCCCACTGAACTCCAGTCCCACAAC +
Preference number: 1 (lower is better)
Translates to: VSLPEPEPDSLRVLS*CDKGVHPTELQSHN
Trigger: GTTGTGGGACTGGAGTTCAGTGGGATGGACGCCTTTATCACACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp GAGGAATCCACAAGAGATTGGTCTCAGAAAGAGCACAGAGTTCAATaGCTCCTCAGAAGCCCCGAGACCTCCAGCAATAAGGGCTCCCCC +
Preference number: 1 (lower is better)
Translates to: EESTRDWSQKEHRVQ*LLRSPETSSNKGSP
Trigger: GGGGGAGCCCTTATTGCTGGAGGTCTCGGGGCTTCTGAGGAGCCATTGAACTCTGTGCTCTTTCTGAGACCAATCTCTTGTGGATTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp ACAACTGCCTATTTGGCTGCCTTTCCATTCAGAGTCACAATCTCTTaGGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCGCCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: TTAYLAAFPFRVTIS*EQVKLAHSAVPPLL
Trigger: CAGGAGGGGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAATGGAAAGGCAGCCAAATAGGCAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp ACTTACTGGGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTaGGAGTCTTGTCATGGTGTGATAAAGGCGTCCATCCCACTGAAC +
Preference number: 1 (lower is better)
Translates to: TYWGQSPSQNQNPTL*ESCHGVIKASIPLN
Trigger: GTTCAGTGGGATGGACGCCTTTATCACACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCCCAGTAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp ACTTCTCCCTCCACTGGGATCCTGACCCAAGCCATTGTCCCTACATaGAGGAAATGCCAGTCACTTAGTACAGGTTCCACCACGCTTCGA +
Preference number: 1 (lower is better)
Translates to: TSPSTGILTQAIVPT*RKCQSLSTGSTTLR
Trigger: TCGAAGCGTGGTGGAACCTGTACTAAGTGACTGGCATTTCCTCCATGTAGGGACAATGGCTTGGGTCAGGATCCCAGTGGAGGGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp ATTTGGCTGCCTTTCCATTCAGAGTCACAATCTCTTGAGAGCAAGTaGAACTGGCTCACTCGGCAGTGCCGCCCCTCCTGCTCTCCAAAT +
Preference number: 1 (lower is better)
Translates to: IWLPFHSESQSLESK*NWLTRQCRPSCSPN
Trigger: ATTTGGAGAGCAGGAGGGGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAATGGAAAGGCAGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp AGCTGTGTGGGAGTACCTTGGGGTAATGGGAGGCTGGATGTCTACTaGCTCCCAGAGGAATCCACAAGAGATTGGTCTCAGAAAGAGCAC +
Preference number: 1 (lower is better)
Translates to: SCVGVPWGNGRLDVY*LPEESTRDWSQKEH
Trigger: GTGCTCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAGGTACTCCCACACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp AACTCTGTCTTCAGGAAAGGATTACACGGCAGGAGCTGTAGCCTTTaGCAGAAGAATGCTGCCACTGCCAACTTGCAAACCAACAGGGGA +
Preference number: 1 (lower is better)
Translates to: NSVFRKGLHGRSCSL*QKNAATANLQTNRG
Trigger: TCCCCTGTTGGTTTGCAAGTTGGCAGTGGCAGCATTCTTCTGTCAAAGGCTACAGCTCCTGCCGTGTAATCCTTTCCTGAAGACAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR GCA 90 bp GGCGTCCATCCCACTGAACTCCAGTCCCACAACTGCCTATTTGGCTaGCTTTCCATTCAGAGTCACAATCTCTTGAGAGCAAGTGAAACT +
Preference number: 1 (lower is better)
Translates to: GVHPTELQSHNCLFG*LSIQSHNLLRASET
Trigger: AGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAATGGAAAGGCAGCCAAATAGGCAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 90 bp TGGTGTGATAAAGGCGTCCATCCCACTGAACTCCAGTCCCACAACTaGCTATTTGGCTGCCTTTCCATTCAGAGTCACAATCTCTTGAGA +
Preference number: 1 (lower is better)
Translates to: WCDKGVHPTELQSHN*LFGCLSIQSHNLLR
Trigger: TCTCAAGAGATTGTGACTCTGAATGGAAAGGCAGCCAAATAGGCAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCTTTATCACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp CCATTTTCTCCTGCTGATCATATTCCCTGCCAGTTTTCTACTACCTaGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAG +
Preference number: 1 (lower is better)
Translates to: PFSPADHIPCQFSTT*PTDRLARCLPSCNK
Trigger: CTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCAGGTAGTAGAAAACTGGCAGGGAATATGATCAGCAGGAGAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CCA 90 bp AAGAGCTTCTCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTaGTTCCATTTGGGGCAGTCATATAGGGCTGTTTTCCAGGAGATG +
Preference number: 1 (lower is better)
Translates to: KSFSSKASLAQGESG*FHLGQSYRAVFQEM
Trigger: CATCTCCTGGAAAACAGCCCTATATGACTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGAGAAGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR GCA 90 bp GCAGGAGCTGTAGCCTTTGACAGAAGAATGCTGCCACTGCCAACTTaGAAACCAACAGGGGAAGAATTGGGAATAAATACCAACTCACTC +
Preference number: 1 (lower is better)
Translates to: AGAVAFDRRMLPLPT*KPTGEELGINTNSL
Trigger: GAGTGAGTTGGTATTTATTCCCAATTCTTCCCCTGTTGGTTTGCAAGTTGGCAGTGGCAGCATTCTTCTGTCAAAGGCTACAGCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR GCA 90 bp ACAGGAAATACAGAACAGCCATTTTCTCCTGCTGATCATATTCCCTaGCAGTTTTCTACTACCTGGCCCACTGATCGCCTTGCCAGATGT +
Preference number: 1 (lower is better)
Translates to: TGNTEQPFSPADHIP*QFSTTWPTDRLARC
Trigger: ACATCTGGCAAGGCGATCAGTGGGCCAGGTAGTAGAAAACTGGCAGGGAATATGATCAGCAGGAGAAAATGGCTGTTCTGTATTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 90 bp CCTGTAGTCAAATTGATCACAGTCACTCCAGGAAATGAGGAGGAATaGATCCAGATCCCTCCAACCAGTAACAGCTTTCCATTGAGCACA +
Preference number: 1 (lower is better)
Translates to: PVVKLITVTPGNEEE*IQIPPTSNSFPLST
Trigger: TGTGCTCAATGGAAAGCTGTTACTGGTTGGAGGGATCTGGATTCATTCCTCCTCATTTCCTGGAGTGACTGTGATCAATTTGACTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp TCTGACAGGACACTTCTGTTGTTGAATGCCGCCAACAACACAAAGTaGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGT +
Preference number: 1 (lower is better)
Translates to: SDRTLLLLNAANNTK*NHPFGQPLLLSLSG
Trigger: ACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCCTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 90 bp CCAAGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGATACTAGTATaGTTGTGTAACATTAATGGCCATGGCACATATGTTGTGTCAATC +
Preference number: 1 (lower is better)
Translates to: PRSRSCCSSGRRILV*LCNINGHGTYVVSI
Trigger: GATTGACACAACATATGTGCCATGGCCATTAATGTTACACAACCATACTAGTATCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCTTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp ATACACAAACAAATATTCCTGATTCTGACAGGACACTTCTGTTGTTaGATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAGC +
Preference number: 1 (lower is better)
Translates to: IHKQIFLILTGHFCC*MPPTTQSGIILSAS
Trigger: GCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCCTGTCAGAATCAGGAATATTTGTTTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 90 bp TTCAGGTCTAGCAAAGAGCCATCACAACTCCTAGGCCTGAAAAGGTaGAGTAAAGGAACAATTACTGAAACCTGGGATGATGCAGAATTA +
Preference number: 1 (lower is better)
Translates to: FRSSKEPSQLLGLKR*SKGTITETWDDAEL
Trigger: TAATTCTGCATCATCCCAGGTTTCAGTAATTGTTCCTTTACTTCACCTTTTCAGGCCTAGGAGTTGTGATGGCTCTTTGCTAGACCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CCA 90 bp AAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATACATATaGAATAAGCTAGGACTTCAAGGTCTGAGATCACTGAAAAAGACC +
Preference number: 1 (lower is better)
Translates to: KHGLLEVGFVITKYI*NKLGLQGLRSLKKT
Trigger: GGTCTTTTTCAGTGATCTCAGACCTTGAAGTCCTAGCTTATTCCATATGTATTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 90 bp TGGTTGTGTAACATTAATGGCCATGGCACATATGTTGTGTCAATCTaGTACTCAGAGCTCAATCCTGTAGTCAAATTGATCACAGTCACT +
Preference number: 1 (lower is better)
Translates to: WLCNINGHGTYVVSI*YSELNPVVKLITVT
Trigger: AGTGACTGTGATCAATTTGACTACAGGATTGAGCTCTGAGTATCAGATTGACACAACATATGTGCCATGGCCATTAATGTTACACAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 90 bp TTATTATCCAGCTTTGGTTCTCAATCTGGCTCACACCTCCAACTGTaGAGATTACTGTTAATGAAACTGTGGTTCAACGCTAGTCTATAT +
Preference number: 1 (lower is better)
Translates to: LLSSFGSQSGSHLQL*RLLLMKLWFNASLY
Trigger: ATATAGACTAGCGTTGAACCACAGTTTCATTAACAGTAATCTGCACAGTTGGAGGTGTGAGCCAGATTGAGAACCAAAGCTGGATAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 90 bp TGCAGATTACTGTTAATGAAACTGTGGTTCAACGCTAGTCTATATTaGATGCTGCTCCAAAGGCACAGGGTAAATATTGCTGACAATACT +
Preference number: 1 (lower is better)
Translates to: CRLLLMKLWFNASLY*MLLQRHRVNIADNT
Trigger: AGTATTGTCAGCAATATTTACCCTGTGCCTTTGGAGCAGCATTCAATATAGACTAGCGTTGAACCACAGTTTCATTAACAGTAATCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 90 bp GGAGTTAGATCTAGGTTTGAATTCTGGTACACTCTACTACATAGCTaGGAACACTCATTTCATTACAGTGTTGTTATTACTAGAGACAGG +
Preference number: 1 (lower is better)
Translates to: GVRSRFEFWYTLLHS*EHSFHYSVVITRDR
Trigger: CCTGTCTCTAGTAATAACAACACTGTAATGAAATGAGTGTTCTCAGCTATGTAGTAGAGTGTACCAGAATTCAAACCTAGATCTAACTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 90 bp CGAGTTTTCTGTTGCAACAAACAGGACAATGTTTTAATCAAACTGTaGCTGTGTTCATTTCAGGTTTCCTACATGAAGAATTGTCAATAC +
Preference number: 1 (lower is better)
Translates to: RVFCCNKQDNVLIKL*LCSFQVSYMKNCQY
Trigger: GTATTGACAATTCTTCATGTAGGAAACCTGAAATGAACACAGTCACAGTTTGATTAAAACATTGTCCTGTTTGTTGCAACAGAAAACTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR GCA 90 bp GCTTTCTATCAATGTCCAAGACAGATAAGTAAGCAGTCTTGTAACTaGTTACTTACATGTGGGATGACAGAATTCTTGTTTACTCATAAT +
Preference number: 1 (lower is better)
Translates to: AFYQCPRQISKQSCN*LLTCGMTEFLFTHN
Trigger: ATTATGAGTAAACAAGAATTCTGTCATCCCACATGTAAGTAAGCAGTTACAAGACTGCTTACTTATCTGTCTTGGACATTGATAGAAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp AAACTGGCTCACTCGGCAGTGCCGCCCCTCCTGCTCTCCAAATCCTCCTGCACTCCTGGCCCTCGCTACTaGCTACGCTGGCAGGGAATA +
Preference number: 2 (lower is better)
Translates to: KLAHSAVPPLLLSKSSCTPGPRY*LRWQGI
Trigger: TATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGG...AGTGCAGGAGGATTTGGAGAGCAGGAGGGGCGGCACTGCCGAGTGAGCCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CAA 90 bp TGGCTCCTCAGAAGCCCCGAGACCTCCAGCAATAAGGGCTCCCCCTaGCCAAGTGCAGGCACTGTGAGAATGCCGGGCTTCAGGTACTTC +
Preference number: 2 (lower is better)
Translates to: WLLRSPETSSNKGSP*PSAGTVRMPGFRYF
Trigger: GAAGTACCTGAAGCCCGGCATTCTCACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATTGCTGGAGGTCTCGGGGCTTCTGAGGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR TCA 90 bp CTGGACTTACTGGGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAAGGCGTCCATCCCACTaGACTCCAGTCCCACAACTG +
Preference number: 2 (lower is better)
Translates to: LDLLGTVSLPEPEPDSLRRRPSH*TPVPQL
Trigger: CAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCT...TCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCCCAGTAAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR TCA 90 bp AGCAGTTCCCACCACCTCCAAGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGACCTCCACTGGGATCCTaGCCCAAGCCATTGTCCCTA +
Preference number: 2 (lower is better)
Translates to: SSSHHLQGAGAVALQEEGPPLGS*PKPLSL
Trigger: TAGGGACAATGGCTTGGGTCAGGATCCCAGTGGAGG...TCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCTTGGAGGTGGTGGGAACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CAA 90 bp GGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGTCTaGTCATGGTGTGATAAAGGCGTCCATCCCACTGAACTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: GTVSLPEPEPDSLRV*SWCDKGVHPTELQS
Trigger: GGACTGGAGTTCAGTGGGATGGACGCCTTTATCACACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR TCA 90 bp GAGCACATGAGCTGTGTGGGAGTACCTTGGGGTAATGGGAGGCTGGATGTCTACCAGAACCCGACTCTCTaGGAGTCTTGTCATGGTGTG +
Preference number: 2 (lower is better)
Translates to: EHMSCVGVPWGNGRLDVYQNPTL*ESCHGV
Trigger: CACACCATGACAAGACTCTCAGAGAGTCGGGTTCTG...GTAGACATCCAGCCTCCCATTACCCCAAGGTACTCCCACACAGCTCATGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCCAGGAGGTGGAGGTTaGAGTGAGCCGAGATCGAGC +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCPGGGG*SEPRSS
Trigger: GCTCGATCTCGGCTCACTGCAACCTCCACCTCCTGG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp CTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGGGAAACACTAGGGTGTaGGAGAGGGTGTCTCCCCTA +
Preference number: 2 (lower is better)
Translates to: LGVMGGWMSTDSQRNPQEGNTRV*ERVSPL
Trigger: TAGGGGAGACACCCTCTCCCACACCCTAGTGTTTCC...CTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CAA 90 bp CACAACTGCCTATTTGGCTGCCTTTCCATTCAGAGTCACAATCTCTaGAGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: HNCLFGCLSIQSHNL*RASETGSLGSAAPP
Trigger: AGGAGGGGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAATGGAAAGGCAGCCAAATAGGCAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR GCA 90 bp CAGAGTCACAATCTCTTGAGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCGCCTGGGCGCACTTCAGATaGCACTCCTCAAATTCGTCA +
Preference number: 2 (lower is better)
Translates to: QSHNLLRASETGSLGSAAWAHFR*HSSNSS
Trigger: TGACGAATTTGAGGAGTGGCATCTGAAGTGCGCCCA...GGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CCA 90 bp CTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGTACTTCTCCCTCCACTaGGATCCTGACCCAAGCCAT +
Preference number: 2 (lower is better)
Translates to: LGVMGGWMSTDSQRNPQEYFSLH*DPDPSH
Trigger: ATGGCTTGGGTCAGGATCCCAGTGGAGGGAGAAGTA...CTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CAA 90 bp TGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATaGGTCTCAGAAAGAGCACAGAGTTCAATGGCTCCTCAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: WEAGCLLTPRGIHKR*VSERAQSSMAPQKP
Trigger: GGGCTTCTGAGGAGCCATTGAACTCTGTGCTCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR GCA 90 bp CAGAGTCACAATCTCTTGAGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCGCCCTCTCCAAATCCTCCTaGACTGAGAATAACGTCTGG +
Preference number: 2 (lower is better)
Translates to: QSHNLLRASETGSLGSAALSKSS*TENNVW
Trigger: CCAGACGTTATTCTCAGTGCAGGAGGATTTGGAGAG...GGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCTGGTCTCCAACTCCTaGGTTCAAGTGATCTGCCAG +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCLVSNS*VQVICQ
Trigger: CTGGCAGATCACTTGAACTCAGGAGTTGGAGACCAG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCTCTGGTGCCTCTGACTaGTGGAACTCAACCAAAAAG +
Preference number: 2 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFSGASD*WNSTKK
Trigger: CTTTTTGGTTGAGTTCCACCAGTCAGAGGCACCAGA...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCAGTTTTCTACTACCTaGCCCACTGATCGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCQFSTT*PTDRLA
Trigger: GGCAAGGCGATCAGTGGGCCAGGTAGTAGAAAACTG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGCCAGGAGATGACATGTaGGATAAGTCCCAGGGTAAG +
Preference number: 2 (lower is better)
Translates to: SSKASLAQGESGWFHLGQPGDDM*DKSQGK
Trigger: CTTACCCTGGGACTTATCCCACATGTCATCTCCTGG...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp AGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGATACTAGTATGGTTGTGTAACCAAGGCTGGACTTACTaGGGACAGTCTCCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RSRSCCSSGRRILVWLCNQGWTY*GQSPSQ
Trigger: CTGGGAGGGAGACTGTCCCCAGTAAGTCCAGCCTTG...GTTACACAACCATACTAGTATCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CAA 90 bp GTGCCTCTGACTGGTGGAACTCAACCAAAAAGTAAAGAGAGCTCCTaGATGCAGCCCATAAAGGTCAGCCTCTTGGAGCACAGAACAGTG +
Preference number: 2 (lower is better)
Translates to: VPLTGGTQPKSKESS*MQPIKVSLLEHRTV
Trigger: CACTGTTCTGTGCTCCAAGAGGCTGACCTTTATGGGCTGCATCAAGGAGCTCTCTTTACTTTTTGGTTGAGTTCCACCAGTCAGAGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTaGGGGCAGTCATATAGGGCTGTTTTCCAGGAGATGACATGTGGG +
Preference number: 2 (lower is better)
Translates to: SSKASLAQGESGWFH*GQSYRAVFQEMTCG
Trigger: CCCACATGTCATCTCCTGGAAAACAGCCCTATATGACTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp GCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATTGGTCTCAGAAAGACTCCAGTCCCACAACTaGCTATTTGGCTGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: AGCLLTPRGIHKRLVSERLQSHN*LFGCLS
Trigger: GGAAAGGCAGCCAAATAGGCAGTTGTGGGACTGGAG...TCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCACAACCCTCATTCAGCTaGTCTCCCCCGGGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSQPSFS*SPPGRL
Trigger: AAGCCTCCCCGGGGGAGACCAGCTGAATGAGGGTTG...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGCTTTGGTTCTCAATCTaGCTCACACCTCCAACTGTG +
Preference number: 2 (lower is better)
Translates to: SSKASLAQGESGWFHLGQLWFSI*LTPPTV
Trigger: CACAGTTGGAGGTGTGAGCCAGATTGAGAACCAAAG...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp TGTCATGGTGTGATAAAGGCGTCCATCCCACTGAACTCCAGTCCCACAACTGCCAAGAAGACAGAGGCGTaGCCATATCTCTTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: CHGVIKASIPLNSSPTTAKKTEA*PYLFRF
Trigger: AAACCTGAAGAGATATGGCCACGCCTCTGTCTTCTT...GGCAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCTTTATCACACCATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CCA 90 bp ATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTGAGAACCCCCAAGGCTaGACTTACTGGGGACAGTCT +
Preference number: 2 (lower is better)
Translates to: MPPTTQSGIILSASLCYCENPQG*TYWGQS
Trigger: AGACTGTCCCCAGTAAGTCCAGCCTTGGGGGTTCTC...ACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR TCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGTGGAGCACAGAACAGTaGAAGGTGGAGAGTATATCT +
Preference number: 2 (lower is better)
Translates to: SSKASLAQGESGWFHLGQWSTEQ*KVESIS
Trigger: AGATATACTCTCCACCTTTCACTGTTCTGTGCTCCA...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAACAAGGCATGTGCCACTaGGCCTGGCCTCATCACAGT +
Preference number: 2 (lower is better)
Translates to: SESTKRSNSTGLEEHILQQGMCH*AWPHHS
Trigger: ACTGTGATGAGGCCAGGCGCAGTGGCACATGCCTTG...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAATGGGATCAAGGCATGTaGCACTGCGCCTGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: SESTKRSNSTGLEEHILQWDQGM*HCAWPH
Trigger: ATGAGGCCAGGCGCAGTGGCACATGCCTTGATCCCA...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGATGTGCCACTGCGCCTaGCCTCATCACAGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQMCHCA*PHHSVL
Trigger: CAGAACACTGTGATGAGGCCAGGCGCAGTGGCACAT...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCTAGTCTATATTGAATaGTGCTCCAAAGGCACAGGG +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCLVYIE*CSKGTG
Trigger: CCCTGTGCCTTTGGAGCAGCATTCAATATAGACTAG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCTTCATTGATCTCACATaGCTCACTAGGCAACAGATT +
Preference number: 2 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFFIDLT*LTRQQI
Trigger: AATCTGTTGCCTAGTGAGCCATGTGAGATCAATGAA...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp GCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATTGGTCTCAGAAAGAGCCATTGTCCCTACATaGAGGAAATGCCAGTCACTT +
Preference number: 2 (lower is better)
Translates to: AGCLLTPRGIHKRLVSERAIVPT*RKCQSL
Trigger: AAGTGACTGGCATTTCCTCCATGTAGGGACAATGGC...TCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTAAGTCTCAGGAAAGCTaGAGTTGGACAACAACCTTT +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCKSQES*SWTTTF
Trigger: AAAGGTTGTTGTCCAACTTCAGCTTTCCTGAGACTT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGCTCATCACAGTGTTCTaGTTTTATCTGCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: SSKASLAQGESGWFHLGQLITVF*FYLLLK
Trigger: TTTCAGGAGCAGATAAAAGCAGAACACTGTGATGAG...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp CAGAGTCACAATCTCTTGAGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCGCCGGGTCATCCTATTTGTaGAAAACTTTATTGTCTACT +
Preference number: 2 (lower is better)
Translates to: QSHNLLRASETGSLGSAAGSSYL*KTLLST
Trigger: AGTAGACAATAAAGTTTTCCACAAATAGGATGACCC...GGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAGTGGAAGGTGTAACCTaGGCTTTGGAGTTAGATCTA +
Preference number: 2 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKVEGVT*ALELDL
Trigger: TAGATCTAACTCCAAAGCCCAGGTTACACCTTCCAC...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCCGTGCAAAATGAATTaGGGCATCAAAAGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCPCKMN*GIKSLL
Trigger: AAGCAAACTTTTGATGCCTCAATTCATTTTGCACGG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCATCCACATTCTCTAGATaGCCTCCCTCCTCCCTTCTT +
Preference number: 2 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSSTFSR*PPSSLL
Trigger: AAGAAGGGAGGAGGGAGGTCATCTAGAGAATGTGGA...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTAAGCAGTCTTGTAACTaGTTACTTACATGTGGGATG +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCKQSCN*LLTCGM
Trigger: CATCCCACATGTAAGTAAGCAGTTACAAGACTGCTT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp ACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTCGTCTCCCCTAGAAGCTaGCAGAATGAAATAATGGGC +
Preference number: 2 (lower is better)
Translates to: TQSGIILSASLCYCHFQVVSPRS*QNEIMG
Trigger: GCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGAC...GACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCGGGTCATCCTATTTGTaGAAAACTTTATTGTCTACT +
Preference number: 2 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFGSSYL*KTLLST
Trigger: AGTAGACAATAAAGTTTTCCACAAATAGGATGACCC...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 90 bp AAAAGTAAAGAGAGCTCCTTGATGCAGCCCATAAAGGTCAGCCTCTaGGAGCACAGAACAGTGAAAGGTGGAGAGTATATCTGGAACAAA +
Preference number: 2 (lower is better)
Translates to: KSKESSLMQPIKVSL*EHRTVKGGEYIWNK
Trigger: TTTGTTCCAGATATACTCTCCACCTTTCACTGTTCTGTGCTCCAAGAGGCTGACCTTTATGGGCTGCATCAAGGAGCTCTCTTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 90 bp AATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTaGTTATTGTCACTTTCAGGTCCTCAGTGTTATTATCCTCACTCT +
Preference number: 2 (lower is better)
Translates to: NAANNTKWNHPFGQP*LLSLSGPQCYYPHS
Trigger: AGAGTGAGGATAATAACACTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CAA 90 bp CCCCATACACAAACAAATATTCCTGATTCTGACAGGACACTTCTGTaGTTGAATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGC +
Preference number: 2 (lower is better)
Translates to: PHTQTNIPDSDRTLL*LNAANNTKWNHPFG
Trigger: GCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCCTGTCAGAATCAGGAATATTTGTTTGTGTATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR TCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAACTAGGCCTGAAAAGGTaGAGTAAAGGAACAATTACT +
Preference number: 2 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKLGLKR*SKGTIT
Trigger: AGTAATTGTTCCTTTACTTCACCTTTTCAGGCCTAG...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAGCCATTTTCTCCTGCTaGTCATATTCCCTGCCAGTT +
Preference number: 2 (lower is better)
Translates to: SESTKRSNSTGLEEHILQAIFSC*SYSLPV
Trigger: AACTGGCAGGGAATATGATCAGCAGGAGAAAATGGC...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTACTCTACTACATAGCTaGGAACACTCATTTCATTAC +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCTLLHS*EHSFHY
Trigger: GTAATGAAATGAGTGTTCTCAGCTATGTAGTAGAGT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGAACGCTAGTCTATATTaGATGCTGCTCCAAAGGCAC +
Preference number: 2 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQNASLY*MLLQRH
Trigger: GTGCCTTTGGAGCAGCATTCAATATAGACTAGCGTT...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTTTGAGGTTGGGTTTGTaGTCACAAAATACATATGGA +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCLRLGL*SQNTYG
Trigger: TCCATATGTATTTTGTGATCACAAACCCAACCTCAA...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTTACTTACATGTGGGATaGCAGAATTCTTGTTTACTC +
Preference number: 2 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCYLHVG*QNSCLL
Trigger: GAGTAAACAAGAATTCTGTCATCCCACATGTAAGTA...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGGAAGAATGCTGCCACTaGCAACTTGCAAACCAACAG +
Preference number: 2 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKEECCH*QLANQQ
Trigger: CTGTTGGTTTGCAAGTTGGCAGTGGCAGCATTCTTC...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 90 bp TTTATTCACCAAACTCTTCAAAGAGCTTCTCTTCAAAGGCTTCTCTaGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGTCATATA +
Preference number: 2 (lower is better)
Translates to: FIHQTLQRASLQRLL*HREKAVGSIWGSHI
Trigger: TATATGACTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGAGAAGCTCTTTGAAGAGTTTGGTGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 90 bp CATACACAAACAAATATTCCTGATTCTGACAGGACACTTCTGTTGTaGAATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAG +
Preference number: 2 (lower is better)
Translates to: HTQTNIPDSDRTLLL*NAANNTKWNHPFGQ
Trigger: CTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCCTGTCAGAATCAGGAATATTTGTTTGTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR GCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTCTACTCCTCTCGGACTaGATGGCCACTGTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFLLLSD*MATVFS
Trigger: GCTGAAGACAGTGGCCATGCAGTCCGAGAGGAGTAG...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 90 bp TGGCATGATGTAAGCAGCATCATAGTGGAAGGTGTAACCTGGGCTTaGGAGTTAGATCTAGGTTTGAATTCTGGTACACTCTACTACATA +
Preference number: 2 (lower is better)
Translates to: WHDVSSIIVEGVTWA*ELDLGLNSGTLYYI
Trigger: TATGTAGTAGAGTGTACCAGAATTCAAACCTAGATCTAACTCCAAAGCCCAGGTTACACCTTCCACTATGATGCTGCTTACATCATGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAATGCGCCACCATCCCTaGCTAATCTTTGTATATATA +
Preference number: 2 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSMRHHP*LIFVYI
Trigger: TATATATACAAAGATTAGCCAGGGATGGTGGCGCAT...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR TCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAATTCAGGTTTCCTACATaGAGAATTGTCAATACTACG +
Preference number: 2 (lower is better)
Translates to: SESTKRSNSTGLEEHILQFRFPT*RIVNTT
Trigger: CGTAGTATTGACAATTCTTCATGTAGGAAACCTGAA...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR GCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAATCCGAGTTTTCTGTTaGAACAAACAGGACAATGTT +
Preference number: 2 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSIRVFC*NKQDNV
Trigger: AACATTGTCCTGTTTGTTGCAACAGAAAACTCGGAT...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 90 bp AATCAAACTGTGACTGTGTTCATTTCAGGTTTCCTACATGAAGAATaGTCAATACTACGCTCCCTCAACTATATTCAACCAAGGATCTGC +
Preference number: 2 (lower is better)
Translates to: NQTVTVFISGFLHEE*SILRSLNYIQPRIC
Trigger: GCAGATCCTTGGTTGAATATAGTTGAGGGAGCGTAGTATTGACAATTCTTCATGTAGGAAACCTGAAATGAACACAGTCACAGTTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAACAATTACTGAAACCTaGGATGATGCAGAATTAGAA +
Preference number: 2 (lower is better)
Translates to: SESTKRSNSTGLEEHILQTITET*DDAELE
Trigger: TTCTAATTCTGCATCATCCCAGGTTTCAGTAATTGT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 72 bp GCAATAAGGGCTCCCCCTTGCCAAGTGCAGGCACTGTaGGAATGCCGGGCTTCAGGTACTTCTCCCTCCACT +
Preference number: 3 (lower is better)
Translates to: AIRAPPCQVQAL*ECRASGTSPST
Trigger: AGTGGAGGGAGAAGTACCTGAAGCCCGGCATTCTCACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 72 bp CACCATGCCCAGCCTATACCACAACCCTCATTCAGCTaGTCTCCCCCGGGGAGGCTTCATCTAACAGAGCCA +
Preference number: 3 (lower is better)
Translates to: HHAQPIPQPSFS*SPPGRLHLTEP
Trigger: TGGCTCTGTTAGATGAAGCCTCCCCGGGGGAGACCAGCTGAATGAGGGTTGTGGTATAGGCTGGGCATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CCA 72 bp ACAGAGGCGTGGCCATATCTCTTCAGGTTTGGGACCTaGCCCTCGCTACTGACTACGCTGGCAGGGAATACC +
Preference number: 3 (lower is better)
Translates to: TEAWPYLFRFGT*PSLLTTLAGNT
Trigger: GGTATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 72 bp CATATCTCTTCAGGTTTGGGACCTGGCCCTCGCTACTaGCTACGCTGGCAGGGAATACCCCTGAAGGCGAAG +
Preference number: 3 (lower is better)
Translates to: HISSGLGPGPRY*LRWQGIPLKAK
Trigger: CTTCGCCTTCAGGGGTATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 72 bp TCGGCAGTGCCGCCCCTCCTGCTCTCCAAATCCTCCTaGACTGAGAATAACGTCTGGGCTCAAGAAGACAGA +
Preference number: 3 (lower is better)
Translates to: SAVPPLLLSKSS*TENNVWAQEDR
Trigger: TCTGTCTTCTTGAGCCCAGACGTTATTCTCAGTGCAGGAGGATTTGGAGAGCAGGAGGGGCGGCACTGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGGCCCACTGATCGCCTaGCCAGATGTCTTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: SSKASLAQGESGWFHLGQGPLIA*PDVFPA
Trigger: AGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp TGGGAGTACCTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATAATAAGGGCTCCCCCTaGCCAAGTGCAGGCACTGTG +
Preference number: 3 (lower is better)
Translates to: WEYLGVMGGWMSTDSQRNNKGSP*PSAGTV
Trigger: CACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATT...ATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAGGTACTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 72 bp CCTTTCCATTCAGAGTCACAATCTCTTGAGAGCAAGTaGAACTGGCTCACTCGGCAGTGCCGCCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: PFHSESQSLESK*NWLTRQCRPSC
Trigger: GCAGGAGGGGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAATGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 72 bp GCATGTGCCACTGCGCCTGGCCTCATCACAGTGTTCTaGTTTTATCTGCTCCTGAAAGCTGGGGTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: ACATAPGLITVF*FYLLLKAGVCC
Trigger: ACAGCACACCCCAGCTTTCAGGAGCAGATAAAAGCAGAACACTGTGATGAGGCCAGGCGCAGTGGCACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 72 bp GGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTaGGAGTCTTGTCATGGTGTGATAAAGGCGTCCATC +
Preference number: 3 (lower is better)
Translates to: GQSPSQNQNPTL*ESCHGVIKASI
Trigger: GATGGACGCCTTTATCACACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 72 bp CCTGCTGATCATATTCCCTGCCAGTTTTCTACTACCTaGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGC +
Preference number: 3 (lower is better)
Translates to: PADHIPCQFSTT*PTDRLARCLPS
Trigger: GCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCAGGTAGTAGAAAACTGGCAGGGAATATGATCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 72 bp ATCCCTCCAACCAGTAACAGCTTTCCATTGAGCACATaGGCTGTGTGGGAGTACCTTGGGGTAATGGGAGGC +
Preference number: 3 (lower is better)
Translates to: IPPTSNSFPLST*AVWEYLGVMGG
Trigger: GCCTCCCATTACCCCAAGGTACTCCCACACAGCTCATGTGCTCAATGGAAAGCTGTTACTGGTTGGAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 72 bp CCAGAACCAGAACCCGACTCTCTGAGAGTCTTGTCATaGTGTGATAAAGGCGTCCATCCCACTGAACTCCAG +
Preference number: 3 (lower is better)
Translates to: PEPEPDSLRVLS*CDKGVHPTELQ
Trigger: CTGGAGTTCAGTGGGATGGACGCCTTTATCACACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CAA 90 bp CTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGCCTTTCGGCCAGCCTTaGTTATTGTCACTTTCAGGT +
Preference number: 3 (lower is better)
Translates to: LGVMGGWMSTDSQRNPQEPFGQP*LLSLSG
Trigger: ACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGG...CTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 72 bp ATCCTGACCCAAGCCATTGTCCCTACATGGAGGAAATaGCAGTCACTTAGTACAGGTTCCACCACGCTTCGA +
Preference number: 3 (lower is better)
Translates to: ILTQAIVPTWRK*QSLSTGSTTLR
Trigger: TCGAAGCGTGGTGGAACCTGTACTAAGTGACTGGCATTTCCTCCATGTAGGGACAATGGCTTGGGTCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 72 bp TATTTGGCTGCCTTTCCATTCAGAGTCACAATCTCTTaGGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCG +
Preference number: 3 (lower is better)
Translates to: YLAAFPFRVTIS*EQVKLAHSAVP
Trigger: CGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAATGGAAAGGCAGCCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 72 bp AAAGGCGTCCATCCCACTGAACTCCAGTCCCACAACTaGCTATTTGGCTGCCTTTCCATTCAGAGTCACAAT +
Preference number: 3 (lower is better)
Translates to: KGVHPTELQSHN*LFGCLSIQSHN
Trigger: ATTGTGACTCTGAATGGAAAGGCAGCCAAATAGGCAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR CCA 72 bp ACAAGAGATTGGTCTCAGAAAGAGCACAGAGTTCAATaGCTCCTCAGAAGCCCCGAGACCTCCAGCAATAAG +
Preference number: 3 (lower is better)
Translates to: TRDWSQKEHRVQ*LLRSPETSSNK
Trigger: CTTATTGCTGGAGGTCTCGGGGCTTCTGAGGAGCCATTGAACTCTGTGCTCTTTCTGAGACCAATCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CAA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGGGTCCTGGAACATATaGGATACATACCATCTCCCA +
Preference number: 3 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCGSWNI*DTYHLP
Trigger: TGGGAGATGGTATGTATCCAATATGTTCCAGGACCC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR GCA 72 bp ACAGAACAGCCATTTTCTCCTGCTGATCATATTCCCTaGCAGTTTTCTACTACCTGGCCCACTGATCGCCTT +
Preference number: 3 (lower is better)
Translates to: TEQPFSPADHIP*QFSTTWPTDRL
Trigger: AAGGCGATCAGTGGGCCAGGTAGTAGAAAACTGGCAGGGAATATGATCAGCAGGAGAAAATGGCTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CCA 72 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTaGTTCCATTTGGGGCAGTCATATAGGGCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: SSKASLAQGESG*FHLGQSYRAVF
Trigger: GAAAACAGCCCTATATGACTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGGGGATCTGACTTTGTaGCCTGGGCTGGTCTTAAAC +
Preference number: 3 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQGDLTL*PGLVLN
Trigger: GTTTAAGACCAGCCCAGGCAACAAAGTCAGATCCCC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp AGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGATACTAGTATGGTTGTGTAACGGCCAGCCTTTGTTATaGTCACTTTCAGGTCCTCAG +
Preference number: 3 (lower is better)
Translates to: RSRSCCSSGRRILVWLCNGQPLL*SLSGPQ
Trigger: CTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCC...GTTACACAACCATACTAGTATCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCAGAGGGTCATCCTATTaGTGGAAAACTTTATTGTCT +
Preference number: 3 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFRGSSY*WKTLLS
Trigger: AGACAATAAAGTTTTCCACAAATAGGATGACCCTCT...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp TCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTCCTCAGTGTTATTATCCCCCACAACTGCCTATTaGGCTGCCTTTCCATTCAGA +
Preference number: 3 (lower is better)
Translates to: SFRPAFVIVTFRSSVLLSPTTAY*AAFPFR
Trigger: TCTGAATGGAAAGGCAGCCAAATAGGCAGTTGTGGG...GGATAATAACACTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 72 bp GCCCTAATGGACAGTGCTCAAGAGAATAGGCACTATTaGACTCCTAATTTAGGTCTGGCACACGTCCACATT +
Preference number: 3 (lower is better)
Translates to: ALMDSAQENRHY*TPNLGLAHVHI
Trigger: AATGTGGACGTGTGCCAGACCTAAATTAGGAGTGCAATAGTGCCTATTCTCTTGAGCACTGTCCATTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGTTGTGGAAAACTTTATaGTCTACTTTAGTGGGTCCT +
Preference number: 3 (lower is better)
Translates to: SSKASLAQGESGWFHLGQLWKTL*STLVGP
Trigger: AGGACCCACTAAAGTAGACAATAAAGTTTTCCACAA...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTTATCCGAGTTTTCTGTaGCAACAAACAGGACAATGT +
Preference number: 3 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCYPSFL*QQTGQC
Trigger: ACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATA...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 72 bp CTGGCCTCATCACAGTGTTCTGCTTTTATCTGCTCCTaGAAGCTGGGGTGTGCTGTAGTAAACTTAGAAACA +
Preference number: 3 (lower is better)
Translates to: LASSQCSAFICS*KLGCAVVNLET
Trigger: TGTTTCTAAGTTTACTACAGCACACCCCAGCTTTCAGGAGCAGATAAAAGCAGAACACTGTGATGAGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp GAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCCATATCTCTTCAGGTTAGAGGGTCATCCTATTaGTGGAAAACTTTATTGTCT +
Preference number: 3 (lower is better)
Translates to: ENNVWAQEDRGVAISLQVRGSSY*WKTLLS
Trigger: AGACAATAAAGTTTTCCACAAATAGGATGACCCTCT...AACCTGAAGAGATATGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CAA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCCTGGGATTGGGAAATaGTTTTACTTTACTAAAGAC +
Preference number: 3 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCPGIGK*FYFTKD
Trigger: GTCTTTAGTAAAGTAAAACAATTTCCCAATCCCAGG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATCACAAGGCCTGGGATaGGGAAATTGTTTTACTTTA +
Preference number: 3 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKSQGLG*GNCFTL
Trigger: TAAAGTAAAACAATTTCCCAATCCCAGGCCTTGTGA...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCATTTCATTACAGTGTaGTTATTACTAGAGACAGGG +
Preference number: 3 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCHFITV*LLLETG
Trigger: CCCTGTCTCTAGTAATAACAACACTGTAATGAAATG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAGGTGTAACCTGGGCTTaGGAGTTAGATCTAGGTTTG +
Preference number: 3 (lower is better)
Translates to: SESTKRSNSTGLEEHILQGVTWA*ELDLGL
Trigger: CAAACCTAGATCTAACTCCAAAGCCCAGGTTACACC...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR TCA 72 bp AAATTGATCACAGTCACTCCAGGAAATGAGGAGGAATaGATCCAGATCCCTCCAACCAGTAACAGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: KLITVTPGNEEE*IQIPPTSNSFP
Trigger: TGGAAAGCTGTTACTGGTTGGAGGGATCTGGATTCATTCCTCCTCATTTCCTGGAGTGACTGTGATCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR GCA 72 bp AGCTTTGGTTCTCAATCTGGCTCACACCTCCAACTGTaGAGATTACTGTTAATGAAACTGTGGTTCAACGCT +
Preference number: 3 (lower is better)
Translates to: SFGSQSGSHLQL*RLLLMKLWFNA
Trigger: AGCGTTGAACCACAGTTTCATTAACAGTAATCTGCACAGTTGGAGGTGTGAGCCAGATTGAGAACCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CCA 72 bp ACACTTCTGTTGTTGAATGCCGCCAACAACACAAAGTaGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCA +
Preference number: 3 (lower is better)
Translates to: TLLLLNAANNTK*NHPFGQPLLLS
Trigger: TGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCATTCAACAACAGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CAA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCATCAATAGCTACCACATaGGACAGTACAGTTCAGGTC +
Preference number: 3 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSSIATT*DSTVQV
Trigger: GACCTGAACTGTACTGTCCAATGTGGTAGCTATTGA...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR-3UTR CAA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAATTCCTACATGAAGAATaGTCAATACTACGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: SESTKRSNSTGLEEHILQFLHEE*SILRSL
Trigger: GAGGGAGCGTAGTATTGACAATTCTTCATGTAGGAA...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CCA 72 bp AGGAGCTGTTGCTCTTCAGGAAGAAGGATACTAGTATaGTTGTGTAACATTAATGGCCATGGCACATATGTT +
Preference number: 3 (lower is better)
Translates to: RSCCSSGRRILV*LCNINGHGTYV
Trigger: AACATATGTGCCATGGCCATTAATGTTACACAACCATACTAGTATCCTTCTTCCTGAAGAGCAACAGCTCCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR-3UTR CAA 90 bp TCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTCCTCAGTGTTATTATCCTTGTGGAAAACTTTATaGTCTACTTTAGTGGGTCCT +
Preference number: 3 (lower is better)
Translates to: SFRPAFVIVTFRSSVLLSLWKTL*STLVGP
Trigger: AGGACCCACTAAAGTAGACAATAAAGTTTTCCACAA...GGATAATAACACTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 72 bp CTGTTAATGAAACTGTGGTTCAACGCTAGTCTATATTaGATGCTGCTCCAAAGGCACAGGGTAAATATTGCT +
Preference number: 3 (lower is better)
Translates to: LLMKLWFNASLY*MLLQRHRVNIA
Trigger: AGCAATATTTACCCTGTGCCTTTGGAGCAGCATTCAATATAGACTAGCGTTGAACCACAGTTTCATTAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CCA 72 bp GTGGCAGTATCTATAGCTAGAGGGTCATCCTATTTGTaGAAAACTTTATTGTCTACTTTAGTGGGTCCTGAA +
Preference number: 3 (lower is better)
Translates to: VAVSIARGSSYL*KTLLSTLVGPE
Trigger: TTCAGGACCCACTAAAGTAGACAATAAAGTTTTCCACAAATAGGATGACCCTCTAGCTATAGATACTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
3UTR TCA 72 bp AACATTAATGGCCATGGCACATATGTTGTGTCAATCTaGTACTCAGAGCTCAATCCTGTAGTCAAATTGATC +
Preference number: 3 (lower is better)
Translates to: NINGHGTYVVSI*YSELNPVVKLI
Trigger: GATCAATTTGACTACAGGATTGAGCTCTGAGTATCAGATTGACACAACATATGTGCCATGGCCATTAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
3UTR TCA 72 bp TCAAACTGTGACTGTGTTCATTTCAGGTTTCCTACATaGAGAATTGTCAATACTACGCTCCCTCAACTATAT +
Preference number: 3 (lower is better)
Translates to: SNCDCVHFRFPT*RIVNTTLPQLY
Trigger: ATATAGTTGAGGGAGCGTAGTATTGACAATTCTTCATGTAGGAAACCTGAAATGAACACAGTCACAGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR GCA 72 bp CAATGTCCAAGACAGATAAGTAAGCAGTCTTGTAACTaGTTACTTACATGTGGGATGACAGAATTCTTGTTT +
Preference number: 3 (lower is better)
Translates to: QCPRQISKQSCN*LLTCGMTEFLF
Trigger: AAACAAGAATTCTGTCATCCCACATGTAAGTAAGCAGTTACAAGACTGCTTACTTATCTGTCTTGGACATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCAGGAGCAGAGTGGGTaGGGCTGCGTCGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFQEQSG*GCVEPR
Trigger: GCGGGGCTCGACGCAGCCTCACCCACTCTGCTCCTG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGGGCTGCCCAGGCGATaGGGGCCGCGGCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCGLPRR*GPRHSP
Trigger: CGGAGAGTGCCGCGGCCCTCATCGCCTGGGCAGCCC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp AGAAGCCCCGAGACCTCCAGCAATAAGGGCTCCCCCTaGCCAAGTGCAGGCACTGTGAGAATGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RSPETSSNKGSP*PSAGTVRMPGF
Trigger: GAAGCCCGGCATTCTCACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATTGCTGGAGGTCTCGGGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp AATCCTCCTGCACTGAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCCAGTTCTGTACCGCGCCTaGCCGACGCTCACGGCTCCG +
Preference number: 4 (lower is better)
Translates to: NPPALRITSGLKKTEAWPVLYRA*PTLTAP
Trigger: CGGAGCCGTGAGCGTCGGGCAGGCGCGGTACAGAAC...TGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGTGCAGGAGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp GGTGTGGGAGAGGGTGTCTCCCCTAGAAGCTGCCAGAATGAAATAATGGGCGCATGGCTCACTCGGCAGTaGCGCCCCTCCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVGEGVSPRSCQNEIMGAWLTRQ*RPSCSP
Trigger: TGGAGAGCAGGAGGGGCGGCACTGCCGAGTGAGCCA...TGCGCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGACACCCTCTCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp CTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGCCAGGGAACGCTTGCTaGGGGCGCTGCTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LGVMGGWMSTDSQRNPQEPGNAC*GRCCRW
Trigger: CCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGG...CTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGTGCCTCACGGCGCGTaGGCGGACGTAGTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQVPHGA*ADVVAS
Trigger: CGAGGCTACTACGTCCGCGCACGCGCCGTGAGGCAC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAAGACAGAGGCGTGGCCATATCTCTTCAGGTTTGGGACCTGGCCCTCGCTACTCAGTGCCGCCCCTCCTaGTCTCCAAATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EDRGVAISLQVWDLALATQCRPS*SPNPPA
Trigger: TGCAGGAGGATTTGGAGAGCAGGAGGGGCGGCACTG...AGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCGGCCAGGAGCAGAGTaGGTGAGGCTGCGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCRPGAE*VRLRRA
Trigger: GGCTCGACGCAGCCTCACCCACTCTGCTCCTGGCCG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp CAGAGTCACAATCTCTTGAGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCGCCCCTCCACTGGGATCCTaGCCCAAGCCATTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: QSHNLLRASETGSLGSAAPPLGS*PKPLSL
Trigger: TAGGGACAATGGCTTGGGTCAGGATCCCAGTGGAGG...GGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCCGAGAGACAAGATCTaGGCGCGAAGCGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCPRDKI*ARSAAW
Trigger: CCAGGCCGCGCTTCGCGCGCAGATCTTGTCTCTCGG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGTCCACTCGCTGGAGCTaGCGCAAGTCCAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQSTRWS*RKSRPR
Trigger: CCTGGGTCTGGACTTGCGGCAGCTCCAGCGAGTGGA...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGGCTCCGGGGGCCCATaGCCAGAAGAGACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQGSGGP*PEETQE
Trigger: TTCCTGAGTCTCTTCTGGCCATGGGCCCCCGGAGCC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGCCTCCTCCACTCGCTaGAGCTGCCGCAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQASSTR*SCRKSR
Trigger: TCTGGACTTGCGGCAGCTCCAGCGAGTGGAGGAGGC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGCCTGGCCCTCGCTACTaGCTACGCTGGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQPGPRY*LRWQGI
Trigger: TATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGG...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp CTGGACTTACTGGGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGACTCCAGTCCCACAACTaGCTATTTGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LDLLGTVSLPEPEPDSLRLQSHN*LFGCLS
Trigger: GGAAAGGCAGCCAAATAGGCAGTTGTGGGACTGGAG...TCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCCCAGTAAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAGCGCGAAGCGCGGCCTaGGGCGCGCCAATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSARSAA*GAPICS
Trigger: GGAGCAGATTGGCGCGCCCCAGGCCGCGCTTCGCGC...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp CAGAGTCACAATCTCTTGAGAGCAAGTGAAACTGGCTCACTCGGCAGTGCCGCCTTCAGGTTTGGGACCTaGCCCTCGCTACTGACTACG +
Preference number: 4 (lower is better)
Translates to: QSHNLLRASETGSLGSAAFRFGT*PSLLTT
Trigger: CGTAGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAA...GGCGGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GGTGTGGGAGAGGGTGTCTCCCCTAGAAGCTGCCAGAATGAAATAATGGGCGCAGAGCACAGAGTTCAATaGCTCCTCAGAAGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GVGEGVSPRSCQNEIMGAEHRVQ*LLRSPE
Trigger: CTCGGGGCTTCTGAGGAGCCATTGAACTCTGTGCTC...TGCGCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGACACCCTCTCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GAAGACAGAGGCGTGGCCATATCTCTTCAGGTTTGGGACCTGGCCCTCGCTACTTGTGTGGGAGTACCTTaGGGTAATGGGAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: EDRGVAISLQVWDLALATCVGVP*GNGRLD
Trigger: ATCCAGCCTCCCATTACCCCAAGGTACTCCCACACA...AGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp GAAGGCGAAGCAGGATTTACGCGAGGAAATGCCTCTGAGGATGGAAACACTAGGAGTCTGTCACGGTTGTaGGCCGCCCCTTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: EGEAGFTRGNASEDGNTRSLSRL*AAPWLA
Trigger: TGCTAACCAAGGGGCGGCTCACAACCGTGACAGACT...CCTAGTGTTTCCATCCTCAGAGGCATTTCCTCGCGTAAATCCTGCTTCGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAAAAGCGCGCACGCAGTaGCTCACGGCGCGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQKARTQ*LTARAR
Trigger: CCGCGCACGCGCCGTGAGGCACTGCGTGCGCGCTTT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAATCCACCTCCCAGACTaGAGCCCGGGCCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQIHLPD*SPGQAA
Trigger: GGCCGCCTGGCCCGGGCTGCAGTCTGGGAGGTGGAT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAAGGAAGCGGCGCCGCTaGGCCTCCACGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKRKRRR*ASTSGK
Trigger: TTTTCCTGACGTGGAGGCGCAGCGGCGCCGCTTCCT...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp CTGGACTTACTGGGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGAAGAGACTCAGGAATaGCAGTCTGTCACGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LDLLGTVSLPEPEPDSLREETQE*QSVTVV
Trigger: CACAACCGTGACAGACTGCCATTCCTGAGTCTCTTC...TCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCCCAGTAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp CCTAGAAGCTGCCAGAATGAAATAATGGGCGCACTTCAGATGCCACTCCTCAAAGGCTCCGGGGGCCCATaGCCAGAAGAGACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRSCQNEIMGALQMPLLKGSGGP*PEETQE
Trigger: TTCCTGAGTCTCTTCTGGCCATGGGCCCCCGGAGCC...TTTGAGGAGTGGCATCTGAAGTGCGCCCATTATTTCATTCTGGCAGCTTCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp CTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGGAGAACCCCCAAGGCTaGACTTACTGGGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: LGVMGGWMSTDSQRNPQEENPQG*TYWGQS
Trigger: AGACTGTCCCCAGTAAGTCCAGCCTTGGGGGTTCTC...CTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GGTGTGGGAGAGGGTGTCTCCCCTAGAAGCTGCCAGAATGAAATAATGGGCGCATACTTCTCCCTCCACTaGGATCCTGACCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: GVGEGVSPRSCQNEIMGAYFSLH*DPDPSH
Trigger: ATGGCTTGGGTCAGGATCCCAGTGGAGGGAGAAGTA...TGCGCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGACACCCTCTCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp AATCCTCCTGCACTGAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCCACAGAACCCGACTCTCTaGGAGTCTTGTCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: NPPALRITSGLKKTEAWPQNPTL*ESCHGV
Trigger: CACACCATGACAAGACTCTCAGAGAGTCGGGTTCTG...TGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGTGCAGGAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp CTGGACTTACTGGGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGATTTCCATTGAGCACATaGGCTGTGTGGGAGTACCTT +
Preference number: 4 (lower is better)
Translates to: LDLLGTVSLPEPEPDSLRFPLST*AVWEYL
Trigger: AAGGTACTCCCACACAGCTCATGTGCTCAATGGAAA...TCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCCCAGTAAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGGCGGGCAGATCACTTaGGGTCAGGAGTTGGATACC +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCGGQIT*GQELDT
Trigger: GGTATCCAACTCCTGACCTCAAGTGATCTGCCCGCC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAGTTCTGTACCGCGCCTaGCCGACGCTCACGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQVLYRA*PTLTAP
Trigger: CGGAGCCGTGAGCGTCGGGCAGGCGCGGTACAGAAC...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGTTCAGGTTTGGGACCTaGCCCTCGCTACTGACTACG +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQFRFGT*PSLLTT
Trigger: CGTAGTCAGTAGCGAGGGCCAGGTCCCAAACCTGAA...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp CCTGCCAGTTTTCTACTACCTGGCCCACTGATCGCCTaGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PASFLLPGPLIA*PDVFPAVISPV
Trigger: AACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCAGGTAGTAGAAAACTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp TCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGTCTaGTCATGGTGTGATAAAGGCGTCCATCCCACTGAA +
Preference number: 4 (lower is better)
Translates to: SLPEPEPDSLRV*SWCDKGVHPTE
Trigger: TTCAGTGGGATGGACGCCTTTATCACACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCACCAGGGAACGCTTGCTaGGGGCGCTGCTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSPGNAC*GRCCRW
Trigger: CCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGG...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp GCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATTGGTCTCAGAAAGAAGGCGTCCATCCCACTaGACTCCAGTCCCACAACTG +
Preference number: 4 (lower is better)
Translates to: AGCLLTPRGIHKRLVSERRRPSH*TPVPQL
Trigger: CAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCT...TCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAACCTCCACTGGGATCCTaGCCCAAGCCATTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKPPLGS*PKPLSL
Trigger: TAGGGACAATGGCTTGGGTCAGGATCCCAGTGGAGG...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGTGGCTCACTCGGCAGTaGCGCCCCTCCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKWLTRQ*RPSCSP
Trigger: TGGAGAGCAGGAGGGGCGGCACTGCCGAGTGAGCCA...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp CTGGACTTACTGGGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAAAGAAGACAGAGGCGTaGCCATATCTCTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LDLLGTVSLPEPEPDSLRKKTEA*PYLFRF
Trigger: AAACCTGAAGAGATATGGCCACGCCTCTGTCTTCTT...TCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCCCAGTAAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GAGCACATGAGCTGTGTGGGAGTACCTTGGGGTAATGGGAGGCTGGATGTCTACACTGAGAATAACGTCTaGGCTCAAGAAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: EHMSCVGVPWGNGRLDVYTENNV*AQEDRG
Trigger: GCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGT...GTAGACATCCAGCCTCCCATTACCCCAAGGTACTCCCACACAGCTCATGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGTCTTGTCATGGTGGCCATTGTCCCTACATaGAGGAAATGCCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: DSLPPRTRTRLSESLVMVAIVPT*RKCQSL
Trigger: AAGTGACTGGCATTTCCTCCATGTAGGGACAATGGC...CACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGCAGTTTTCTACTACCTaGCCCACTGATCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQQFSTT*PTDRLA
Trigger: GGCAAGGCGATCAGTGGGCCAGGTAGTAGAAAACTG...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCCAGGAGATGACATGTaGGATAAGTCCCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFPGDDM*DKSQGK
Trigger: CTTACCCTGGGACTTATCCCACATGTCATCTCCTGG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGCGGTTGGTTCCATTTaGGGCAGTCATATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQAVGSI*GSHIGL
Trigger: CAGCCCTATATGACTGCCCCAAATGGAACCAACCGC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp CAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGCCTGGCCCTCGCTACTaGCTACGCTGGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: QHKVESSFRPAFVIVTFRPGPRY*LRWQGI
Trigger: TATTCCCTGCCAGCGTAGTCAGTAGCGAGGGCCAGG...CCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTGCGGCAAAGGGGTCCTaGACGTACCCGCGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFAAKGS*TYPRAA
Trigger: GGCCGCGCGCGGGTACGTGCAGGACCCCTTTGCCGC...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTAGTCCAGACCCAGGATaGAGTAGTCTGCGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCSPDPG*SSLRSQ
Trigger: TTGAGAGCGCAGACTACTGCATCCTGGGTCTGGACT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGTCTTGTCATGGTGAACTGCCTATTTGGCTaGCTTTCCATTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: DSLPPRTRTRLSESLVMVNCLFG*LSIQSH
Trigger: GTGACTCTGAATGGAAAGGCAGCCAAATAGGCAGTT...CACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCTCCAGTCCCACAACTaGCTATTTGGCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCLQSHN*LFGCLS
Trigger: GGAAAGGCAGCCAAATAGGCAGTTGTGGGACTGGAG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCCTTTGACAGAAGAATaGTGCCACTGCCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFPLTEE*CHCQLA
Trigger: TGCAAGTTGGCAGTGGCAGCATTCTTCTGTCAAAGG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCTTCAAAGGCTTCTCTTaGACAGGGAGAAAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFFKGFS*TGRKRL
Trigger: CAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAA...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAGGGCGCTGCTGTCGTTaGTGTTCTGTACCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQGRCCR*CSVPRL
Trigger: CAGGCGCGGTACAGAACACCAACGACAGCAGCGCCC...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TGGGAGTACCTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATGCCAACAACACAAAGTaGAATCATCCTTTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: WEYLGVMGGWMSTDSQRNANNTK*NHPFGQ
Trigger: CTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGC...ATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAGGTACTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAGAGCACAGAGTTCAATaGCTCCTCAGAAGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKEHRVQ*LLRSPE
Trigger: CTCGGGGCTTCTGAGGAGCCATTGAACTCTGTGCTC...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp GCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTaGGGGCAGTCATATAGGGCTGTTTTCCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: ASLAQGESGWFH*GQSYRAVFQEM
Trigger: CATCTCCTGGAAAACAGCCCTATATGACTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTAGTAGCCTCGGTGAATaGGCGGTGCGCGGCGCGCCG +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFSSLGE*AVRGAP
Trigger: CGGCGCGCCGCGCACCGCTCATTCACCGAGGCTACT...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCAGTCACTCCAGGAAATaGGGAGGAATGAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFSHSRK*GGMNPD
Trigger: ATCTGGATTCATTCCTCCTCATTTCCTGGAGTGACT...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCAACAGCACTGGCCTTaGAGAGCATATCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCQQHWP*RAYPPT
Trigger: TGTTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGCTCTCCAATCCTTTCTaGTTTGCGCCGCGCCACGTC +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQLSNPF*FAPRHV
Trigger: GACGTGGCGCGGCGCAAAGCAGAAAGGATTGGAGAG...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTTGGGCGCACTTCAGATaGCACTCCTCAAATTCGTCA +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCWAHFR*HSSNSS
Trigger: TGACGAATTTGAGGAGTGGCATCTGAAGTGCGCCCA...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAACAGTGCCGCCCCTCCTaGTCTCCAAATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQQCRPS*SPNPPA
Trigger: TGCAGGAGGATTTGGAGAGCAGGAGGGGCGGCACTG...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGAGGAGCAGGAGCTGTTaGTCTTCAGGAAGAAGGATA +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQRSRSC*SSGRRI
Trigger: TATCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCT...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAAGGCGAAGCAGGATTTACGCGAGGAAATGCCTCTGAGGATGGAAACACTAGGAGGAGCAGGAGCTGTTaGTCTTCAGGAAGAAGGATA +
Preference number: 4 (lower is better)
Translates to: EGEAGFTRGNASEDGNTRRSRSC*SSGRRI
Trigger: TATCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCT...CCTAGTGTTTCCATCCTCAGAGGCATTTCCTCGCGTAAATCCTGCTTCGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAACCAGGAGGTGGAGGTTaGAGTGAGCCGAGATCGAGC +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQPGGGG*SEPRSS
Trigger: GCTCGATCTCGGCTCACTGCAACCTCCACCTCCTGG...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp ATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTGGAAACACTAGGGTGTaGGAGAGGGTGTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: MPPTTQSGIILSASLCYCGNTRV*ERVSPL
Trigger: TAGGGGAGACACCCTCTCCCACACCCTAGTGTTTCC...ACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp TCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTCCTCAGTGTTATTATCCCAAGGCTGGACTTACTaGGGACAGTCTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SFRPAFVIVTFRSSVLLSQGWTY*GQSPSQ
Trigger: CTGGGAGGGAGACTGTCCCCAGTAAGTCCAGCCTTG...GGATAATAACACTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATACTTCTCCCTCCACTaGGATCCTGACCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKYFSLH*DPDPSH
Trigger: ATGGCTTGGGTCAGGATCCCAGTGGAGGGAGAAGTA...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATGTGTGGGAGTACCTTaGGGTAATGGGAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKCVGVP*GNGRLD
Trigger: ATCCAGCCTCCCATTACCCCAAGGTACTCCCACACA...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGCAACCCTCATTCAGCTaGTCTCCCCCGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKQPSFS*SPPGRL
Trigger: AAGCCTCCCCGGGGGAGACCAGCTGAATGAGGGTTG...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGACCAAGGAAACACCTaGGTCCTGGAACATATTGGA +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQDQGNT*VLEHIG
Trigger: TCCAATATGTTCCAGGACCCAGGTGTTTCCTTGGTC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp CTATTTGGCTGCCTTTCCATTCAGAGTCACAATCTCTaGAGAGCAAGTGAAACTGGCTCACTCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LFGCLSIQSHNL*RASETGSLGSA
Trigger: GGCACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAATGGAAAGGCAGCCAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAAGTCTGTCACGGTTGTaGGCCGCCCCTTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSSLSRL*AAPWLA
Trigger: TGCTAACCAAGGGGCGGCTCACAACCGTGACAGACT...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGAGGCGTCCATCCCACTaGACTCCAGTCCCACAACTG +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKRRPSH*TPVPQL
Trigger: CAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCT...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGCCATTTTCTCCTGCTaGTCATATTCCCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCAIFSC*SYSLPV
Trigger: AACTGGCAGGGAATATGATCAGCAGGAGAAAATGGC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAGCTTTTATCTGCTCCTaGAAGCTGGGGTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKAFICS*KLGCAV
Trigger: TACAGCACACCCCAGCTTTCAGGAGCAGATAAAAGC...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCACAATCCTTTCTGCTTTaGGCCGCGCCACGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSQSFLL*AAPRPE
Trigger: TTCCGGACGTGGCGCGGCGCAAAGCAGAAAGGATTG...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGCCGCCGGCGTTCTTCTaGGGGAAGAAAGCAGTGATA +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQPPAFF*GKKAVI
Trigger: TATCACTGCTTTCTTCCCGCAGAAGAACGCCGGCGG...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGTCTCCCCTAGAAGCTaGCAGAATGAAATAATGGGC +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCVSPRS*QNEIMG
Trigger: GCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGAC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCACTTCTGTTGTTGAATaGCGCCAACAACACAAAGTG +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFTSVVE*RQQHKV
Trigger: CACTTTGTGTTGTTGGCGGCATTCAACAACAGAAGT...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp AATCCTCCTGCACTGAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCCAACTTCTGTTGTTGAATaGCGCCAACAACACAAAGTG +
Preference number: 4 (lower is better)
Translates to: NPPALRITSGLKKTEAWPTSVVE*RQQHKV
Trigger: CACTTTGTGTTGTTGGCGGCATTCAACAACAGAAGT...TGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGTGCAGGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAACTCCCCCTTGCCAAGTaGAGGCACTGTGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQLPLAK*RHCENA
Trigger: GGCATTCTCACAGTGCCTGCACTTGGCAAGGGGGAG...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGCTACTCCTCTCGGACTaGATGGCCACTGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQLLLSD*MATVFS
Trigger: GCTGAAGACAGTGGCCATGCAGTCCGAGAGGAGTAG...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCACAAGGCATGTGCCACTaGGCCTGGCCTCATCACAGT +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSQGMCH*AWPHHS
Trigger: ACTGTGATGAGGCCAGGCGCAGTGGCACATGCCTTG...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCATGGGATCAAGGCATGTaGCACTGCGCCTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSWDQGM*HCAWPH
Trigger: ATGAGGCCAGGCGCAGTGGCACATGCCTTGATCCCA...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGCTAGTCTATATTGAATaGTGCTCCAAAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQLVYIE*CSKGTG
Trigger: CCCTGTGCCTTTGGAGCAGCATTCAATATAGACTAG...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCACCGAGATCGAGCCACTaGACTCTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSPRSSH*TLAWAT
Trigger: TGTTGCCCAGGCTAGAGTGCAGTGGCTCGATCTCGG...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAGCATTAGGAAAACGCTaGGCTGCCCAGGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSALGKR*AAQAMR
Trigger: CCTCATCGCCTGGGCAGCCCAGCGTTTTCCTAATGC...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGGAAACACTAGGGTGTaGGAGAGGGTGTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQGNTRV*ERVSPL
Trigger: TAGGGGAGACACCCTCTCCCACACCCTAGTGTTTCC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGCAAGGCTGGACTTACTaGGGACAGTCTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKQGWTY*GQSPSQ
Trigger: CTGGGAGGGAGACTGTCCCCAGTAAGTCCAGCCTTG...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGAGAACCCCCAAGGCTaGACTTACTGGGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQENPQG*TYWGQS
Trigger: AGACTGTCCCCAGTAAGTCCAGCCTTGGGGGTTCTC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGCCAACAACACAAAGTaGAATCATCCTTTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCANNTK*NHPFGQ
Trigger: CTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp CAAACTCTTCAAAGAGCTTCTCTTCAAAGGCTTCTCTaGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: QTLQRASLQRLL*HREKAVGSIWG
Trigger: GCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGAGAAGCTCTTTGAAGAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp GGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATaGGTCTCAGAAAGAGCACAGAGTTCAATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GCLLTPRGIHKR*VSERAQSSMAP
Trigger: AGGAGCCATTGAACTCTGTGCTCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp AGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGATACTAGTATGGTTGTGTAACGGAAATGAGGAGGAATaGATCCAGATCCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: RSRSCCSSGRRILVWLCNGNEEE*IQIPPT
Trigger: GGTTGGAGGGATCTGGATTCATTCCTCCTCATTTCC...GTTACACAACCATACTAGTATCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCCGTGCAAAATGAATTaGGGCATCAAAAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFPCKMN*GIKSLL
Trigger: AAGCAAACTTTTGATGCCTCAATTCATTTTGCACGG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGAAGTCTCAGGAAAGCTaGAGTTGGACAACAACCTTT +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQKSQES*SWTTTF
Trigger: AAAGGTTGTTGTCCAACTTCAGCTTTCCTGAGACTT...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAACAGGATGCAGTAGTCTaGGCTCTCAAAGCACAGCGC +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQQDAVV*ALKAQR
Trigger: GCGCTGTGCTTTGAGAGCGCAGACTACTGCATCCTG...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCCTACATGGAGGAAATaGCAGTCACTTAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCPTWRK*QSLSTG
Trigger: ACCTGTACTAAGTGACTGGCATTTCCTCCATGTAGG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GTAACATTAATGGCCATGGCACATATGTTGTGTCAATCTGATACTCAGAGCTCACTCCCCCTTGCCAAGTaGAGGCACTGTGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: VTLMAMAHMLCQSDTQSSLPLAK*RHCENA
Trigger: GGCATTCTCACAGTGCCTGCACTTGGCAAGGGGGAG...TGAGCTCTGAGTATCAGATTGACACAACATATGTGCCATGGCCATTAATGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAGAAGAATGCTGCCACTaGCAACTTGCAAACCAACAG +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKEECCH*QLANQQ
Trigger: CTGTTGGTTTGCAAGTTGGCAGTGGCAGCATTCTTC...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGCTGATCATATTCCCTaGCAGTTTTCTACTACCTGG +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCADHIP*QFSTTW
Trigger: CCAGGTAGTAGAAAACTGGCAGGGAATATGATCAGC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCTCATCACAGTGTTCTaGTTTTATCTGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFLITVF*FYLLLK
Trigger: TTTCAGGAGCAGATAAAAGCAGAACACTGTGATGAG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCAAGCAGTCTTGTAACTaGTTACTTACATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFKQSCN*LLTCGM
Trigger: CATCCCACATGTAAGTAAGCAGTTACAAGACTGCTT...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGCCTCAGTCAAGGAACTaGCCCTTCCCAATCATGTGC +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQPQSRN*PFPIMC
Trigger: GCACATGATTGGGAAGGGGCAGTTCCTTGACTGAGG...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATCTGGTGCCTCTGACTaGTGGAACTCAACCAAAAAG +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKSGASD*WNSTKK
Trigger: CTTTTTGGTTGAGTTCCACCAGTCAGAGGCACCAGA...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAATGTGCCACTGCGCCTaGCCTCATCACAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQMCHCA*PHHSVL
Trigger: CAGAACACTGTGATGAGGCCAGGCGCAGTGGCACAT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp AGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGATACTAGTATGGTTGTGTAACGGACACTTCTGTTGTTaGATGCCGCCAACAACACAA +
Preference number: 4 (lower is better)
Translates to: RSRSCCSSGRRILVWLCNGHFCC*MPPTTQ
Trigger: TTGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCC...GTTACACAACCATACTAGTATCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGTAACAGCTTTCCATTaGGCACATGAGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQVTAFH*AHELCG
Trigger: CCCACACAGCTCATGTGCTCAATGGAAAGCTGTTAC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp CAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGGTAACAGCTTTCCATTaGGCACATGAGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QHKVESSFRPAFVIVTFRVTAFH*AHELCG
Trigger: CCCACACAGCTCATGTGCTCAATGGAAAGCTGTTAC...CCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGCTGGTCTCCAACTCCTaGGTTCAAGTGATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKLVSNS*VQVICQ
Trigger: CTGGCAGATCACTTGAACTCAGGAGTTGGAGACCAG...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGTCCACATTCTCTAGATaGCCTCCCTCCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQSTFSR*PPSSLL
Trigger: AAGAAGGGAGGAGGGAGGTCATCTAGAGAATGTGGA...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCTATTTTTGAAACCCTaGCCCAGAGTGGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCLFLKP*PRVEIQ
Trigger: TTGAATCTCCACTCTGGGTCAGGGTTTCAAAAATAG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp ACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTCTGGGCGCACTTCAGATaGCACTCCTCAAATTCGTCA +
Preference number: 4 (lower is better)
Translates to: TQSGIILSASLCYCHFQVWAHFR*HSSNSS
Trigger: TGACGAATTTGAGGAGTGGCATCTGAAGTGCGCCCA...GACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAACTGAGAGTCTTGTCATaGTGTGATAAAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKLRVLS*CDKGVH
Trigger: ATGGACGCCTTTATCACACCATGACAAGACTCTCAG...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATTGGTCTCAGAAAGACTGAGAGTCTTGTCATaGTGTGATAAAGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: AGCLLTPRGIHKRLVSERLRVLS*CDKGVH
Trigger: ATGGACGCCTTTATCACACCATGACAAGACTCTCAG...TCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTGAATCCACAAGAGATTaGTCTCAGAAAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCESTRD*SQKEHR
Trigger: TCTGTGCTCTTTCTGAGACCAATCTCTTGTGGATTC...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp AGCAGTTCCCACCACCTCCAAGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGAGGGTCATCCTATTTGTaGAAAACTTTATTGTCTACT +
Preference number: 4 (lower is better)
Translates to: SSSHHLQGAGAVALQEEGGSSYL*KTLLST
Trigger: AGTAGACAATAAAGTTTTCCACAAATAGGATGACCC...TCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCTTGGAGGTGGTGGGAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGTTCATTGATCTCACATaGCTCACTAGGCAACAGATT +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQFIDLT*LTRQQI
Trigger: AATCTGTTGCCTAGTGAGCCATGTGAGATCAATGAA...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAACAGGGAGAAAGCGGTTaGTTCCATTTGGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQQGESG*FHLGQS
Trigger: TGACTGCCCCAAATGGAACCAACCGCTTTCTCCCTG...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp AGGTTCCACCACGCTTCGACCCCCATACACAAACAAATATTCCTGATTCTGACAAGTCACTCCAGGAAATaGGGAGGAATGAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: RFHHASTPIHKQIFLILTSHSRK*GGMNPD
Trigger: ATCTGGATTCATTCCTCCTCATTTCCTGGAGTGACT...TGTCAGAATCAGGAATATTTGTTTGTGTATGGGGGTCGAAGCGTGGTGGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp CAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGGTCTCCCCTAGAAGCTaGCAGAATGAAATAATGGGC +
Preference number: 4 (lower is better)
Translates to: QHKVESSFRPAFVIVTFRVSPRS*QNEIMG
Trigger: GCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGAC...CCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp ACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTCCTCTCCAAATCCTCCTaGACTGAGAATAACGTCTGG +
Preference number: 4 (lower is better)
Translates to: TQSGIILSASLCYCHFQVLSKSS*TENNVW
Trigger: CCAGACGTTATTCTCAGTGCAGGAGGATTTGGAGAG...GACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp ATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCCTACATGGAGGAAATaGCAGTCACTTAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: MPPTTQSGIILSASLCYCPTWRK*QSLSTG
Trigger: ACCTGTACTAAGTGACTGGCATTTCCTCCATGTAGG...ACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGCCATTGTCCCTACATaGAGGAAATGCCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQAIVPT*RKCQSL
Trigger: AAGTGACTGGCATTTCCTCCATGTAGGGACAATGGC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATTGGTCTCAGAAAGAGAATCCACAAGAGATTaGTCTCAGAAAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: AGCLLTPRGIHKRLVSERESTRD*SQKEHR
Trigger: TCTGTGCTCTTTCTGAGACCAATCTCTTGTGGATTC...TCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGCTTTGGTTCTCAATCTaGCTCACACCTCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQLWFSI*LTPPTV
Trigger: CACAGTTGGAGGTGTGAGCCAGATTGAGAACCAAAG...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAGGTCCTGGAACATATTaGATACATACCATCTCCCAA +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKGPGTY*IHTISQ
Trigger: TTGGGAGATGGTATGTATCCAATATGTTCCAGGACC...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAGAAAATGTTGCAGCATaGACTGGCCAAAGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSENVAA*TGQRRL
Trigger: AAGACGCCTTTGGCCAGTTCATGCTGCAACATTTTC...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAGGACACTTCTGTTGTTaGATGCCGCCAACAACACAA +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSGHFCC*MPPTTQ
Trigger: TTGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCC...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCATTTCCATTGAGCACATaGGCTGTGTGGGAGTACCTT +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSFPLST*AVWEYL
Trigger: AAGGTACTCCCACACAGCTCATGTGCTCAATGGAAA...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAAGCTGCCGAAAATGTTaGAGCATGAACTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQSCRKC*SMNWPK
Trigger: CTTTGGCCAGTTCATGCTGCAACATTTTCGGCAGCT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAACTCTCCAAATCCTCCTaGACTGAGAATAACGTCTGG +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQLSKSS*TENNVW
Trigger: CCAGACGTTATTCTCAGTGCAGGAGGATTTGGAGAG...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAACTGAGAATAACGTCTaGGCTCAAGAAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQTENNV*AQEDRG
Trigger: GCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGAGAAGGATACTAGTATaGTTGTGTAACATTAATGGC +
Preference number: 4 (lower is better)
Translates to: SSKASLAQGESGWFHLGQRRILV*LCNING
Trigger: GCCATTAATGTTACACAACCATACTAGTATCCTTCT...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp CTGAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCCATATCTCTTCAGGAGAAGGATACTAGTATaGTTGTGTAACATTAATGGC +
Preference number: 4 (lower is better)
Translates to: LRITSGLKKTEAWPYLFRRRILV*LCNING
Trigger: GCCATTAATGTTACACAACCATACTAGTATCCTTCT...CCTGAAGAGATATGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAATGCGCCACCATCCCTaGCTAATCTTTGTATATATA +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKMRHHP*LIFVYI
Trigger: TATATATACAAAGATTAGCCAGGGATGGTGGCGCAT...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTAACCCTGACCCAGAGTaGAGATTCAAAATAAGAAAT +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCNPDPE*RFKIRN
Trigger: ATTTCTTATTTTGAATCTCCACTCTGGGTCAGGGTT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTCTGCTTACTTACATGTaGGATGACAGAATTCTTGTT +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCLLTYM*DDRILV
Trigger: AACAAGAATTCTGTCATCCCACATGTAAGTAAGCAG...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp GTAAGCAGCATCATAGTGGAAGGTGTAACCTGGGCTTaGGAGTTAGATCTAGGTTTGAATTCTGGTACACTC +
Preference number: 4 (lower is better)
Translates to: VSSIIVEGVTWA*ELDLGLNSGTL
Trigger: GAGTGTACCAGAATTCAAACCTAGATCTAACTCCAAAGCCCAGGTTACACCTTCCACTATGATGCTGCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp ATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTTATGTTGTGTCAATCTaGTACTCAGAGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: MPPTTQSGIILSASLCYCYVVSI*YSELNP
Trigger: AGGATTGAGCTCTGAGTATCAGATTGACACAACATA...ACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCATGGAGCACAGAACAGTaGAAGGTGGAGAGTATATCT +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSWSTEQ*KVESIS
Trigger: AGATATACTCTCCACCTTTCACTGTTCTGTGCTCCA...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAAACGCTAGTCTATATTaGATGCTGCTCCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQNASLY*MLLQRH
Trigger: GTGCCTTTGGAGCAGCATTCAATATAGACTAGCGTT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATACTTACATGTGGGATaGCAGAATTCTTGTTTACTC +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKYLHVG*QNSCLL
Trigger: GAGTAAACAAGAATTCTGTCATCCCACATGTAAGTA...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGCTGAAAGCTGGGGTGTaGTGTAGTAAACTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQLKAGV*CSKLRN
Trigger: GTTTCTAAGTTTACTACAGCACACCCCAGCTTTCAG...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTAAATTTCATAATTCCTaGTCTACACACTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCKFHNS*STHSPS
Trigger: AGAAGGAGAGTGTGTAGAGCAGGAATTATGAAATTT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAAAGAAGACAGAGGCGTaGCCATATCTCTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQKKTEA*PYLFRF
Trigger: AAACCTGAAGAGATATGGCCACGCCTCTGTCTTCTT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTACAATTACTGAAACCTaGGATGATGCAGAATTAGAA +
Preference number: 4 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCTITET*DDAELE
Trigger: TTCTAATTCTGCATCATCCCAGGTTTCAGTAATTGT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTCAGTACCTGAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFQYLSS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCCCAGCTACTCAGGTACTG...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAATTATTATCCAGCTTTaGTTCTCAATCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKIIIQL*FSIWLT
Trigger: TGTGAGCCAGATTGAGAACCAAAGCTGGATAATAAT...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGATTGGACTGTCCCTATaGTTAAAAACCCACCTAGGC +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKIGLSL*LKTHLG
Trigger: GCCTAGGTGGGTTTTTAACCATAGGGACAGTCCAAT...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp ACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATaGTCACTTTCAGGTCCTCAGTGTTATTATCCTCAC +
Preference number: 4 (lower is better)
Translates to: TKWNHPFGQPLL*SLSGPQCYYPH
Trigger: GTGAGGATAATAACACTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTCAGAACCCGACTCTCTaGGAGTCTTGTCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFQNPTL*ESCHGV
Trigger: CACACCATGACAAGACTCTCAGAGAGTCGGGTTCTG...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGTACTTTAGTGGGTCCTaGATATTAGTCCAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQYFSGS*ILVQSL
Trigger: TAAGGACTGGACTAATATTCAGGACCCACTAAAGTA...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp CAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTACTTTAGTGGGTCCTaGATATTAGTCCAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: QHKVESSFRPAFVIVTFRYFSGS*ILVQSL
Trigger: TAAGGACTGGACTAATATTCAGGACCCACTAAAGTA...CCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAATGATACACTATTTTTaGAACCCTGACCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQMIHYF*NPDPEW
Trigger: CCACTCTGGGTCAGGGTTTCAAAAATAGTGTATCAT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAAAAGCTCCAGAAAGATaGAAAACGGGCACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQKAPER*KTGTQF
Trigger: AAACTGAGTGCCCGTTTTTCATCTTTCTGGAGCTTT...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp GGAGTGGCAGTATCTATAGCTAGAGGGTCATCCTATTaGTGGAAAACTTTATTGTCTACTTTAGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GVAVSIARGSSY*WKTLLSTLVGP
Trigger: AGGACCCACTAAAGTAGACAATAAAGTTTTCCACAAATAGGATGACCCTCTAGCTATAGATACTGCCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
3UTR CAA 72 bp AGCTGTTGCTCTTCAGGAAGAAGGATACTAGTATGGTaGTGTAACATTAATGGCCATGGCACATATGTTGTG +
Preference number: 4 (lower is better)
Translates to: SCCSSGRRILVW*CNINGHGTYVV
Trigger: CACAACATATGTGCCATGGCCATTAATGTTACACAACCATACTAGTATCCTTCTTCCTGAAGAGCAACAGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR TCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTGGAAATGAGGAGGAATaGATCCAGATCCCTCCAACC +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFGNEEE*IQIPPT
Trigger: GGTTGGAGGGATCTGGATTCATTCCTCCTCATTTCC...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAATATGTTGTGTCAATCTaGTACTCAGAGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: SESTKRSNSTGLEEHILQYVVSI*YSELNP
Trigger: AGGATTGAGCTCTGAGTATCAGATTGACACAACATA...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCACTAGGCCTGAAAAGGTaGAGTAAAGGAACAATTACT +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSLGLKR*SKGTIT
Trigger: AGTAATTGTTCCTTTACTTCACCTTTTCAGGCCTAG...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGTTGAGGTTGGGTTTGTaGTCACAAAATACATATGGA +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQLRLGL*SQNTYG
Trigger: TCCATATGTATTTTGTGATCACAAACCCAACCTCAA...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGACATCAAGTCTAATGTaGTTAGCCAAGTTACATGAC +
Preference number: 4 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQTSSLM*LAKLHD
Trigger: GTCATGTAACTTGGCTAATCACATTAGACTTGATGT...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTGAAGAGACTCAGGAATaGCAGTCTGTCACGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFEETQE*QSVTVV
Trigger: CACAACCGTGACAGACTGCCATTCCTGAGTCTCTTC...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR TCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGACTCTACTACATAGCTaGGAACACTCATTTCATTAC +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKTLLHS*EHSFHY
Trigger: GTAATGAAATGAGTGTTCTCAGCTATGTAGTAGAGT...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGATCCGAGTTTTCTGTTaGAACAAACAGGACAATGTT +
Preference number: 4 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKIRVFC*NKQDNV
Trigger: AACATTGTCCTGTTTGTTGCAACAGAAAACTCGGAT...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp AACAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTaGTTATTGTCACTTTCAGGTCCTCAGTGTTATTAT +
Preference number: 4 (lower is better)
Translates to: NNTKWNHPFGQP*LLSLSGPQCYY
Trigger: ATAATAACACTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR GCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTAACTGCCTATTTGGCTaGCTTTCCATTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFNCLFG*LSIQSH
Trigger: GTGACTCTGAATGGAAAGGCAGCCAAATAGGCAGTT...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCATTACATGACCTAACTTaGCGGCTTAATGCTATTTTA +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSLHDLT*RLNAIL
Trigger: TAAAATAGCATTAAGCCGGCAAGTTAGGTCATGTAA...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TCACTTATAGGAAATGTGGGTAATTTCTCTCGGGAGAACAAGCCCTGTTACTCAGGGTCATCCTATTTGTaGAAAACTTTATTGTCTACT +
Preference number: 4 (lower is better)
Translates to: SLIGNVGNFSRENKPCYSGSSYL*KTLLST
Trigger: AGTAGACAATAAAGTTTTCCACAAATAGGATGACCC...TGAGTAACAGGGCTTGTTCTCCCGAGAGAAATTACCCACATTTCCTATAAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
3UTR CAA 72 bp GTGACTGTGTTCATTTCAGGTTTCCTACATGAAGAATaGTCAATACTACGCTCCCTCAACTATATTCAACCA +
Preference number: 4 (lower is better)
Translates to: VTVFISGFLHEE*SILRSLNYIQP
Trigger: TGGTTGAATATAGTTGAGGGAGCGTAGTATTGACAATTCTTCATGTAGGAAACCTGAAATGAACACAGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR GCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTCCCTTCCCAATCATGTaGTTTCTATCAATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFPFPIM*FLSMSK
Trigger: CTTGGACATTGATAGAAAGCACATGATTGGGAAGGG...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTCTGTTAATGAAACTGTaGTTCAACGCTAGTCTATAT +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFLLMKL*FNASLY
Trigger: ATATAGACTAGCGTTGAACCACAGTTTCATTAACAG...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CCA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTCAAACTAGACATTATTaGACTGTCCCTATGGTTAAA +
Preference number: 4 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFQTRHY*TVPMVK
Trigger: TTTAACCATAGGGACAGTCCAATAATGTCTAGTTTG...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS TCA 90 bp CGGCTCGAGGTAGGTCAGCACCGCCTCGGCCAGGAGCAGAGTGGGTaGGGCTGCGTCGAGCCCCGCGGCGCCCAGGGCCTCCTCCACTCG +
Preference number: 5 (lower is better)
Translates to: RLEVGQHRLGQEQSG*GCVEPRGAQGLLHS
Trigger: CGAGTGGAGGAGGCCCTGGGCGCCGCGGGGCTCGACGCAGCCTCACCCACTCTGCTCCTGGCCGAGGCGGTGCTGACCTACCTCGAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS TCA 90 bp TTCCACCCGCCGGCGTTCTTCCGCGCGCGGCCAGGGAACGCTTGCTaGGGGCGCTGCTGTCGTTGGTGTTCTGTACCGCGCCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: FHPPAFFRARPGNAC*GRCCRWCSVPRLPD
Trigger: GTCGGGCAGGCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGAAGAACGCCGGCGGGTGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS TCA 90 bp CAAAGGGGTCCTGCACGTACCCGCGCGCGGCCAGGGAACGCTTGCTaGGGGCGCTGCTGTCGTTGGTGTTCTGTACCGCGCCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: QRGPARTRARPGNAC*GRCCRWCSVPRLPD
Trigger: GTCGGGCAGGCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGGTACGTGCAGGACCCCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS GCA 90 bp ACGCTTGCTGAGGGCGCTGCTGTCGTTGGTGTTCTGTACCGCGCCTaGCCGACGCTCACGGCTCCGGGGGCCCATGGCCAGAAGAGACTC +
Preference number: 5 (lower is better)
Translates to: TLAEGAAVVGVLYRA*PTLTAPGAHGQKRL
Trigger: GAGTCTCTTCTGGCCATGGGCCCCCGGAGCCGTGAGCGTCGGGCAGGCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
CDS GCA 90 bp GGGCCTCCTCCACTCGCTGGAGCTGCCGCAAGTCCAGACCCAGGATaGAGTAGTCTGCGCTCTCAAAGCACAGCGCGGACGCGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GPPPLAGAAASPDPG*SSLRSQSTARTRAP
Trigger: GGGAGCCCGCGTCCGCGCTGTGCTTTGAGAGCGCAGACTACTGCATCCTGGGTCTGGACTTGCGGCAGCTCCAGCGAGTGGAGGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS CCA 90 bp TGTTCTGTACCGCGCCTGCCCGACGCTCACGGCTCCGGGGGCCCATaGCCAGAAGAGACTCAGGAATGGCAGTCTGTCACGGTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: CSVPRLPDAHGSGGP*PEETQEWQSVTVVS
Trigger: GCTCACAACCGTGACAGACTGCCATTCCTGAGTCTCTTCTGGCCATGGGCCCCCGGAGCCGTGAGCGTCGGGCAGGCGCGGTACAGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
CDS CCA 90 bp GACGCTCACGGCTCCGGGGGCCCATGGCCAGAAGAGACTCAGGAATaGCAGTCTGTCACGGTTGTGAGCCGCCCCTTGGTTAGCACACAC +
Preference number: 5 (lower is better)
Translates to: DAHGSGGPWPEETQE*QSVTVVSRPLVSTH
Trigger: GTGTGTGCTAACCAAGGGGCGGCTCACAACCGTGACAGACTGCCATTCCTGAGTCTCTTCTGGCCATGGGCCCCCGGAGCCGTGAGCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
CDS GCA 90 bp CGGTTAACGCGCACAGCTCTGGCGTCTCTCCAATCCTTTCTGCTTTaGGCCGCGCCACGTCCGGAAAATCCACCTCCCAGACTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RLTRTALASLQSFLL*AAPRPENPPPRLQP
Trigger: GGGCTGCAGTCTGGGAGGTGGATTTTCCGGACGTGGCGCGGCGCAAAGCAGAAAGGATTGGAGAGACGCCAGAGCTGTGCGCGTTAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS TCA 90 bp GCCCATGGCCAGAAGAGACTCAGGAATGGCAGTCTGTCACGGTTGTaGGCCGCCCCTTGGTTAGCACACACCTCACGGACCTCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: AHGQKRLRNGSLSRL*AAPWLAHTSRTSVG
Trigger: CCCTACCGAGGTCCGTGAGGTGTGTGCTAACCAAGGGGCGGCTCACAACCGTGACAGACTGCCATTCCTGAGTCTCTTCTGGCCATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
CDS-3UTR CAA 90 bp GGTGTGGGAGAGGGTGTCTCCCCTAGAAGCTGCCAGAATGAAATAATGGGCGCAGTTGTGAGCCGCCCCTaGGTTAGCACACACCTCACG +
Preference number: 5 (lower is better)
Translates to: GVGEGVSPRSCQNEIMGAVVSRP*VSTHLT
Trigger: CGTGAGGTGTGTGCTAACCAAGGGGCGGCTCACAAC...TGCGCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGACACCCTCTCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TGTCATGGTGTGATAAAGGCGTCCATCCCACTGAACTCCAGTCCCACAACTGCCAGGGCGCTGCTGTCGTaGGTGTTCTGTACCGCGCCT +
Preference number: 5 (lower is better)
Translates to: CHGVIKASIPLNSSPTTARALLS*VFCTAP
Trigger: AGGCGCGGTACAGAACACCAACGACAGCAGCGCCCT...GGCAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCTTTATCACACCATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TCAGAAAGTACAAAAAGAAGCAACAGCACTGGCCTTGAAGAGCATATCCTCCAAGCGGCCAGGGAACGCTaGCTGAGGGCGCTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: SESTKRSNSTGLEEHILQAARER*LRALLS
Trigger: CGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGC...TTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGCTTCTTTTTGTACTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAACCAATCCTTTCTGCTTaGCGCCGCGCCACGTCCGGA +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKPILSA*RRATSG
Trigger: TCCGGACGTGGCGCGGCGCAAAGCAGAAAGGATTGG...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCATATCTCTTCAGGTTaGGGACCTGGCCCTCGCTAC +
Preference number: 5 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFHISSG*GPGPRY
Trigger: GTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GAAGACAGAGGCGTGGCCATATCTCTTCAGGTTTGGGACCTGGCCCTCGCTACTGACAGGACACTTCTGTaGTTGAATGCCGCCAACAAC +
Preference number: 5 (lower is better)
Translates to: EDRGVAISLQVWDLALATDRTLL*LNAANN
Trigger: GTTGTTGGCGGCATTCAACAACAGAAGTGTCCTGTC...AGTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCACAGGGAGAAAGCGGTaGGTTCCATTTGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFTGRKR*VPFGAV
Trigger: GACTGCCCCAAATGGAACCAACCGCTTTCTCCCTGT...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGAGGGCGCTGCTGTCGTaGGTGTTCTGTACCGCGCCT +
Preference number: 5 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQRALLS*VFCTAP
Trigger: AGGCGCGGTACAGAACACCAACGACAGCAGCGCCCT...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCCCACAACTGCCTATTaGGCTGCCTTTCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFPTTAY*AAFPFR
Trigger: TCTGAATGGAAAGGCAGCCAAATAGGCAGTTGTGGG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TGTCATGGTGTGATAAAGGCGTCCATCCCACTGAACTCCAGTCCCACAACTGCCGGCCAGCCTTTGTTATaGTCACTTTCAGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: CHGVIKASIPLNSSPTTAGQPLL*SLSGPQ
Trigger: CTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCC...GGCAGTTGTGGGACTGGAGTTCAGTGGGATGGACGCCTTTATCACACCATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp GACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGTCTTGTCATGGTGAGGACACTTCTGTTGTaGAATGCCGCCAACAACACA +
Preference number: 5 (lower is better)
Translates to: DSLPPRTRTRLSESLVMVRTLLL*NAANNT
Trigger: TGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCCT...CACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCGACAGGACACTTCTGTaGTTGAATGCCGCCAACAAC +
Preference number: 5 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFDRTLL*LNAANN
Trigger: GTTGTTGGCGGCATTCAACAACAGAAGTGTCCTGTC...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGGGGATCTGACTTTGTaGCCTGGGCTGGTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: SSKASLAQGESGWFHLGQGDLTL*PGLVLN
Trigger: GTTTAAGACCAGCCCAGGCAACAAAGTCAGATCCCC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGAGCGGTTGGTTCCATTaGGGGCAGTCATATAGGGCT +
Preference number: 5 (lower is better)
Translates to: SSKASLAQGESGWFHLGQSGWFH*GQSYRA
Trigger: AGCCCTATATGACTGCCCCAAATGGAACCAACCGCT...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGTTGTGAGCCGCCCCTaGGTTAGCACACACCTCACG +
Preference number: 5 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQVVSRP*VSTHLT
Trigger: CGTGAGGTGTGTGCTAACCAAGGGGCGGCTCACAAC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GAAGGCGAAGCAGGATTTACGCGAGGAAATGCCTCTGAGGATGGAAACACTAGGCCCACAACTGCCTATTaGGCTGCCTTTCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: EGEAGFTRGNASEDGNTRPTTAY*AAFPFR
Trigger: TCTGAATGGAAAGGCAGCCAAATAGGCAGTTGTGGG...CCTAGTGTTTCCATCCTCAGAGGCATTTCCTCGCGTAAATCCTGCTTCGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCCCTTTCGGCCAGCCTTaGTTATTGTCACTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFPFGQP*LLSLSG
Trigger: ACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGG...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TGGGAGTACCTTGGGGTAATGGGAGGCTGGATGTCTACTGACTCCCAGAGGAATCCTTTCGGCCAGCCTTaGTTATTGTCACTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: WEYLGVMGGWMSTDSQRNPFGQP*LLSLSG
Trigger: ACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGG...ATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCATTACCCCAAGGTACTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp AGGTTCCACCACGCTTCGACCCCCATACACAAACAAATATTCCTGATTCTGACAAATAAGGGCTCCCCCTaGCCAAGTGCAGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: RFHHASTPIHKQIFLILTNKGSP*PSAGTV
Trigger: CACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATT...TGTCAGAATCAGGAATATTTGTTTGTGTATGGGGGTCGAAGCGTGGTGGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp AGCAGTTCCCACCACCTCCAAGGAGCAGGAGCTGTTGCTCTTCAGGAAGAAGGAGCCATGGCACATATGTaGTGTCAATCTGATACTCAG +
Preference number: 5 (lower is better)
Translates to: SSSHHLQGAGAVALQEEGAMAHM*CQSDTQ
Trigger: CTGAGTATCAGATTGACACAACATATGTGCCATGGC...TCCTTCTTCCTGAAGAGCAACAGCTCCTGCTCCTTGGAGGTGGTGGGAACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCAGTAAAGAGAGCTCCTaGATGCAGCCCATAAAGGTC +
Preference number: 5 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFSKESS*MQPIKV
Trigger: GACCTTTATGGGCTGCATCAAGGAGCTCTCTTTACT...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTGGCGGTCCAGCCAGCTaGAAGGAAGCGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFGGPAS*KEAAPL
Trigger: CAGCGGCGCCGCTTCCTTCAAGCTGGCTGGACCGCC...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGAGTCTTGTCATGGTGAATCCTGTAGTCAAATaGATCACAGTCACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: DSLPPRTRTRLSESLVMVNPVVK*ITVTPG
Trigger: TCCTGGAGTGACTGTGATCAATTTGACTACAGGATT...CACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGGTGTAACCTGGGCTTaGGAGTTAGATCTAGGTTTG +
Preference number: 5 (lower is better)
Translates to: SSKASLAQGESGWFHLGQGVTWA*ELDLGL
Trigger: CAAACCTAGATCTAACTCCAAAGCCCAGGTTACACC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGGGGTCCTGGAACATATaGGATACATACCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: SSKASLAQGESGWFHLGQGSWNI*DTYHLP
Trigger: TGGGAGATGGTATGTATCCAATATGTTCCAGGACCC...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp ACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTCACTTTCAGGTCCATATCTCTTCAGGTTaGGGACCTGGCCCTCGCTAC +
Preference number: 5 (lower is better)
Translates to: TQSGIILSASLCYCHFQVHISSG*GPGPRY
Trigger: GTAGCGAGGGCCAGGTCCCAAACCTGAAGAGATATG...GACCTGAAAGTGACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTAGGACACTTCTGTTGTaGAATGCCGCCAACAACACA +
Preference number: 5 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCRTLLL*NAANNT
Trigger: TGTGTTGTTGGCGGCATTCAACAACAGAAGTGTCCT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp CTGGACTTACTGGGGACAGTCTCCCTCCCAGAACCAGAACCCGACTCTCTGAGATTGTGGAAAACTTTATaGTCTACTTTAGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LDLLGTVSLPEPEPDSLRLWKTL*STLVGP
Trigger: AGGACCCACTAAAGTAGACAATAAAGTTTTCCACAA...TCTCAGAGAGTCGGGTTCTGGTTCTGGGAGGGAGACTGTCCCCAGTAAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAACTTCAAAGGCTTCTCTaGCACAGGGAGAAAGCGGTT +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKLQRLL*HREKAV
Trigger: AACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAG...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS GCA 90 bp AAATTCGTCAAAGGGTTCAATATTTTCCACCCGCCGGCGTTCTTCTaGGGGAAGAAAGCAGTGATAGAATTCATTCATGTCCACGGCACC +
Preference number: 5 (lower is better)
Translates to: KFVKGFNIFHPPAFF*GKKAVIEFIHVHGT
Trigger: GGTGCCGTGGACATGAATGAATTCTATCACTGCTTTCTTCCCGCAGAAGAACGCCGGCGGGTGGAAAATATTGAACCCTTTGACGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GCTGGATGTCTACTGACTCCCAGAGGAATCCACAAGAGATTGGTCTCAGAAAGAGGAATCCACAAGAGATaGGTCTCAGAAAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: AGCLLTPRGIHKRLVSERGIHKR*VSERAQ
Trigger: CTGTGCTCTTTCTGAGACCAATCTCTTGTGGATTCC...TCTTTCTGAGACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp TGGCCCACTGATCGCCTTGCCAGATGTCTTCCCAGCTGTAATAAGCCCTGTTTCTCACAAGGCCTGGGATaGGGAAATTGTTTTACTTTA +
Preference number: 5 (lower is better)
Translates to: WPTDRLARCLPSCNKPCFSQGLG*GNCFTL
Trigger: TAAAGTAAAACAATTTCCCAATCCCAGGCCTTGTGA...GAAACAGGGCTTATTACAGCTGGGAAGACATCTGGCAAGGCGATCAGTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp ATGCCGCCAACAACACAAAGTGGAATCATCCTTTCGGCCAGCCTTTGTTATTGTGACTCTCTGAGAGTCTaGTCATGGTGTGATAAAGGC +
Preference number: 5 (lower is better)
Translates to: MPPTTQSGIILSASLCYCDSLRV*SWCDKG
Trigger: GCCTTTATCACACCATGACAAGACTCTCAGAGAGTC...ACAATAACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGGCCAGCCTTTGTTATaGTCACTTTCAGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQGQPLL*SLSGPQ
Trigger: CTGAGGACCTGAAAGTGACAATAACAAAGGCTGGCC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAGCCATGGCACATATGTaGTGTCAATCTGATACTCAG +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKAMAHM*CQSDTQ
Trigger: CTGAGTATCAGATTGACACAACATATGTGCCATGGC...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp AATCCTCCTGCACTGAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCCAAGAGGGTCATCCTATTaGTGGAAAACTTTATTGTCT +
Preference number: 5 (lower is better)
Translates to: NPPALRITSGLKKTEAWPRGSSY*WKTLLS
Trigger: AGACAATAAAGTTTTCCACAAATAGGATGACCCTCT...TGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTCAGTGCAGGAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATCAATAGCTACCACATaGGACAGTACAGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKSIATT*DSTVQV
Trigger: GACCTGAACTGTACTGTCCAATGTGGTAGCTATTGA...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TCACATGTTGTCAATAGCTACCACATTGGACAGTACAGTTCAGGTCTAGCAAAGGCAACAGCACTGGCCTaGAAGAGCATATCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: SHVVNSYHIGQYSSGLAKATALA*KSISSN
Trigger: GTTGGAGGATATGCTCTTCAAGGCCAGTGCTGTTGC...CTTTGCTAGACCTGAACTGTACTGTCCAATGTGGTAGCTATTGACAACATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAAATCCTGTAGTCAAATaGATCACAGTCACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKNPVVK*ITVTPG
Trigger: TCCTGGAGTGACTGTGATCAATTTGACTACAGGATT...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TCTTCAAAGGCTTCTCTTGCACAGGGAGAAAGCGGTTGGTTCCATTTGGGGCAGCCTGGGATTGGGAAATaGTTTTACTTTACTAAAGAC +
Preference number: 5 (lower is better)
Translates to: SSKASLAQGESGWFHLGQPGIGK*FYFTKD
Trigger: GTCTTTAGTAAAGTAAAACAATTTCCCAATCCCAGG...CTGCCCCAAATGGAACCAACCGCTTTCTCCCTGTGCAAGAGAAGCCTTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAATTCCTACATGAAGAATaGTCAATACTACGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKFLHEE*SILRSL
Trigger: GAGGGAGCGTAGTATTGACAATTCTTCATGTAGGAA...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTAATAAGGGCTCCCCCTaGCCAAGTGCAGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFNKGSP*PSAGTV
Trigger: CACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATT...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GAGAATAACGTCTGGGCTCAAGAAGACAGAGGCGTGGCCATATCTCTTCAGGTTAGGATACTAGTATGGTaGTGTAACATTAATGGCCAT +
Preference number: 5 (lower is better)
Translates to: ENNVWAQEDRGVAISLQVRILVW*CNINGH
Trigger: ATGGCCATTAATGTTACACAACCATACTAGTATCCT...AACCTGAAGAGATATGGCCACGCCTCTGTCTTCTTGAGCCCAGACGTTATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS-3UTR CAA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTAGAGGGTCATCCTATTaGTGGAAAACTTTATTGTCT +
Preference number: 5 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCRGSSY*WKTLLS
Trigger: AGACAATAAAGTTTTCCACAAATAGGATGACCCTCT...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GAACCAGACACAATTCCTTCCCTCAGTCAAGGAACTGCCCCTTCCCAATCATGTTCCATACACTTAGGTTaGTGTTTGCTACTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: EPDTIPSLSQGTAPSQSCSIHLG*CLLLGF
Trigger: AAAACCAAGTAGCAAACACAAACCTAAGTGTATGGA...ACATGATTGGGAAGGGGCAGTTCCTTGACTGAGGGAAGGAATTGTGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTCTGGCCAAAGGCGTCTaGAGGCCTCATCTGCTCATA +
Preference number: 5 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFLAKGV*RPHLLI
Trigger: TATGAGCAGATGAGGCCTCAAGACGCCTTTGGCCAG...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAAAGGATACTAGTATGGTaGTGTAACATTAATGGCCAT +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKRILVW*CNINGH
Trigger: ATGGCCATTAATGTTACACAACCATACTAGTATCCT...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp GATAAGTCCCAGGGTAAGCATGGGCTGCTTGAGGTTGGGTTTGTGATCACAAAACATTTCATTACAGTGTaGTTATTACTAGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: DKSQGKHGLLEVGFVITKHFITV*LLLETG
Trigger: CCCTGTCTCTAGTAATAACAACACTGTAATGAAATG...TTTTGTGATCACAAACCCAACCTCAAGCAGCCCATGCTTACCCTGGGACTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp AGAGGAAGAGACCTGTTCATTAACTCTCATAACTACTCCAGAGCTCCGTATCAGGAGTTAGATCTAGGTTaGAATTCTGGTACACTCTAC +
Preference number: 5 (lower is better)
Translates to: RGRDLFINSHNYSRAPYQELDLG*NSGTLY
Trigger: GTAGAGTGTACCAGAATTCAAACCTAGATCTAACTC...CTGATACGGAGCTCTGGAGTAGTTATGAGAGTTAATGAACAGGTCTCTTCCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTGACTCTCTGAGAGTCTaGTCATGGTGTGATAAAGGC +
Preference number: 5 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFDSLRV*SWCDKG
Trigger: GCCTTTATCACACCATGACAAGACTCTCAGAGAGTC...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS-3UTR CAA 90 bp TTCCTGTTGTTAAAACTATCCGAGTTTTCTGTTGCAACAAACAGGACAATGTTTGGAATCCACAAGAGATaGGTCTCAGAAAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: FLLLKLSEFSVATNRTMFGIHKR*VSERAQ
Trigger: CTGTGCTCTTTCTGAGACCAATCTCTTGTGGATTCC...AAACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS TCA 72 bp GTAGGTCAGCACCGCCTCGGCCAGGAGCAGAGTGGGTaGGGCTGCGTCGAGCCCCGCGGCGCCCAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: VGQHRLGQEQSG*GCVEPRGAQGL
Trigger: GAGGCCCTGGGCGCCGCGGGGCTCGACGCAGCCTCACCCACTCTGCTCCTGGCCGAGGCGGTGCTGACCTAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS GCA 72 bp GCCGCGCCCGGAACCAGCAACGCGGCAAAGGGGTCCTaGACGTACCCGCGCGCGGCCAGGGAACGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: AAPGTSNAAKGS*TYPRAARERLL
Trigger: CAGCAAGCGTTCCCTGGCCGCGCGCGGGTACGTGCAGGACCCCTTTGCCGCGTTGCTGGTTCCGGGCGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS CAA 90 bp TACCCGCGCGCGGCCAGGGAACGCTTGCTGAGGGCGCTGCTGTCGTaGGTGTTCTGTACCGCGCCTGCCCGACGCTCACGGCTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: YPRAARERLLRALLS*VFCTAPARRSRLRG
Trigger: CCCCCGGAGCCGTGAGCGTCGGGCAGGCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS CAA 90 bp CTTCCGCGCGCGGCCAGGGAACGCTTGCTGAGGGCGCTGCTGTCGTaGGTGTTCTGTACCGCGCCTGCCCGACGCTCACGGCTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: LPRAARERLLRALLS*VFCTAPARRSRLRG
Trigger: CCCCCGGAGCCGTGAGCGTCGGGCAGGCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS CAA 90 bp GCGGCAAAGGGGTCCTGCACGTACCCGCGCGCGGCCAGGGAACGCTaGCTGAGGGCGCTGCTGTCGTTGGTGTTCTGTACCGCGCCTGCC +
Preference number: 6 (lower is better)
Translates to: AAKGSCTYPRAARER*LRALLSLVFCTAPA
Trigger: GGCAGGCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGGTACGTGCAGGACCCCTTTGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS TCA 72 bp CCTGCACGTACCCGCGCGCGGCCAGGGAACGCTTGCTaGGGGCGCTGCTGTCGTTGGTGTTCTGTACCGCGC +
Preference number: 6 (lower is better)
Translates to: PARTRARPGNAC*GRCCRWCSVPR
Trigger: GCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGGTACGTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS TCA 72 bp CCGGCGTTCTTCCGCGCGCGGCCAGGGAACGCTTGCTaGGGGCGCTGCTGTCGTTGGTGTTCTGTACCGCGC +
Preference number: 6 (lower is better)
Translates to: PAFFRARPGNAC*GRCCRWCSVPR
Trigger: GCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGAAGAACGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS CAA 72 bp GCGGCCAGGGAACGCTTGCTGAGGGCGCTGCTGTCGTaGGTGTTCTGTACCGCGCCTGCCCGACGCTCACGG +
Preference number: 6 (lower is better)
Translates to: AARERLLRALLS*VFCTAPARRSR
Trigger: CCGTGAGCGTCGGGCAGGCGCGGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
CDS TCA 72 bp TTCATGTCCACGGCACCGCAGGCGGTCCAGCCAGCTTaGAGGAAGCGGCGCCGCTGCGCCTCCACGTCAGGA +
Preference number: 6 (lower is better)
Translates to: FMSTAPQAVQPA*RKRRRCASTSG
Trigger: TCCTGACGTGGAGGCGCAGCGGCGCCGCTTCCTTCAAGCTGGCTGGACCGCCTGCGGTGCCGTGGACATGAA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS CAA 72 bp GGGTCCTGCACGTACCCGCGCGCGGCCAGGGAACGCTaGCTGAGGGCGCTGCTGTCGTTGGTGTTCTGTACC +
Preference number: 6 (lower is better)
Translates to: GSCTYPRAARER*LRALLSLVFCT
Trigger: GGTACAGAACACCAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGGTACGTGCAGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS GCA 72 bp GAGCTGCCGCAAGTCCAGACCCAGGATGCAGTAGTCTaGGCTCTCAAAGCACAGCGCGGACGCGGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: ELPQVQTQDAVV*ALKAQRGRGLP
Trigger: GGGGAGCCCGCGTCCGCGCTGTGCTTTGAGAGCGCAGACTACTGCATCCTGGGTCTGGACTTGCGGCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS GCA 72 bp CCACTCGCTGGAGCTGCCGCAAGTCCAGACCCAGGATaGAGTAGTCTGCGCTCTCAAAGCACAGCGCGGACG +
Preference number: 6 (lower is better)
Translates to: PLAGAAASPDPG*SSLRSQSTART
Trigger: CGTCCGCGCTGTGCTTTGAGAGCGCAGACTACTGCATCCTGGGTCTGGACTTGCGGCAGCTCCAGCGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS CCA 72 bp GGCTCCGGGGGCCCATGGCCAGAAGAGACTCAGGAATaGCAGTCTGTCACGGTTGTGAGCCGCCCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: GSGGPWPEETQE*QSVTVVSRPLV
Trigger: AACCAAGGGGCGGCTCACAACCGTGACAGACTGCCATTCCTGAGTCTCTTCTGGCCATGGGCCCCCGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
CDS CAA 90 bp CCGGTTAACGCGCACAGCTCTGGCGTCTCTCCAATCCTTTCTGCTTaGCGCCGCGCCACGTCCGGAAAATCCACCTCCCAGACTGCAGCC +
Preference number: 6 (lower is better)
Translates to: PVNAHSSGVSPILSA*RRATSGKSTSQTAA
Trigger: GGCTGCAGTCTGGGAGGTGGATTTTCCGGACGTGGCGCGGCGCAAAGCAGAAAGGATTGGAGAGACGCCAGAGCTGTGCGCGTTAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS CAA 72 bp GCGCACAGCTCTGGCGTCTCTCCAATCCTTTCTGCTTaGCGCCGCGCCACGTCCGGAAAATCCACCTCCCAG +
Preference number: 6 (lower is better)
Translates to: AHSSGVSPILSA*RRATSGKSTSQ
Trigger: CTGGGAGGTGGATTTTCCGGACGTGGCGCGGCGCAAAGCAGAAAGGATTGGAGAGACGCCAGAGCTGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS CAA 72 bp CAGGAATGGCAGTCTGTCACGGTTGTGAGCCGCCCCTaGGTTAGCACACACCTCACGGACCTCGGTAGGGGG +
Preference number: 6 (lower is better)
Translates to: QEWQSVTVVSRP*VSTHLTDLGRG
Trigger: CCCCCTACCGAGGTCCGTGAGGTGTGTGCTAACCAAGGGGCGGCTCACAACCGTGACAGACTGCCATTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567039.1
CDS TCA 72 bp CAGAAGAGACTCAGGAATGGCAGTCTGTCACGGTTGTaGGCCGCCCCTTGGTTAGCACACACCTCACGGACC +
Preference number: 6 (lower is better)
Translates to: QKRLRNGSLSRL*AAPWLAHTSRT
Trigger: GGTCCGTGAGGTGTGTGCTAACCAAGGGGCGGCTCACAACCGTGACAGACTGCCATTCCTGAGTCTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305641.7
ENST00000567039.1
CDS CAA 72 bp CCGAAAATGTTGCAGCATGAACTGGCCAAAGGCGTCTaGAGGCCTCATCTGCTCATAGACCACGAAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PKMLQHELAKGV*RPHLLIDHEKG
Trigger: GCCCTTTTCGTGGTCTATGAGCAGATGAGGCCTCAAGACGCCTTTGGCCAGTTCATGCTGCAACATTTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7
CDS GCA 72 bp AAAGGGTTCAATATTTTCCACCCGCCGGCGTTCTTCTaGGGGAAGAAAGCAGTGATAGAATTCATTCATGTC +
Preference number: 6 (lower is better)
Translates to: KGFNIFHPPAFF*GKKAVIEFIHV
Trigger: GACATGAATGAATTCTATCACTGCTTTCTTCCCGCAGAAGAACGCCGGCGGGTGGAAAATATTGAACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305641.7