RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LCLAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172954

Ensembl transcript IDs: ENST00000309052.8, ENST00000319406.8, ENST00000379509.8, ENST00000465200.5, ENST00000465538.5, ENST00000466477.5, ENST00000476038.5, ENST00000478015.5, ENST00000488144.5, ENST00000491680.6, ENST00000497423.1

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCACCACCTGCCTGAGTACCTGGAGGGACAGCGCTCACCTCAATaGGGTGACCTGGGCAGTCCAGTAACAGCATGTGATCCGGGCTGT +
Preference number: 1 (lower is better)
Translates to: GHHLPEYLEGQRSPQ*GDLGSPVTACDPGC
Trigger: ACAGCCCGGATCACATGCTGTTACTGGACTGCCCAGGTCACCTCATTGAGGTGAGCGCTGTCCCTCCAGGTACTCAGGCAGGTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 90 bp CGCAGCCTCTCTTCTTTCTCTTCCCACCGTTTGTGGCACCAGAGTTaGAGGTCCTCCTTGGATGTGGGGAGGGTGTCTATTGGATACCGG +
Preference number: 1 (lower is better)
Translates to: RSLSSFSSHRLWHQS*RSSLDVGRVSIGYR
Trigger: CCGGTATCCAATAGACACCCTCCCCACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAACGGTGGGAAGAGAAAGAAGAGAGGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 90 bp GTTTCACGACAAAGGGGGTTCCATTTTCTGATCTTAAGGATGAGATaGGTTTGGCGCAGGAAGAAGGACGCCAAGGGAGGGAGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: VSRQRGFHFLILRMR*VWRRKKDAKGGSLG
Trigger: GCCCAGGCTCCCTCCCTTGGCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCTTTGTCGTGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 90 bp GCACCAGAGTTGAAGGTCCTCCTTGGATGTGGGGAGGGTGTCTATTaGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCC +
Preference number: 1 (lower is better)
Translates to: APELKVLLGCGEGVY*IPVDVKVDFPGKVS
Trigger: GGAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGGAGGACCTTCAACTCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 90 bp CTTCCCACCGTTTGTGGCACCAGAGTTGAAGGTCCTCCTTGGATGTaGGGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTT +
Preference number: 1 (lower is better)
Translates to: LPTVCGTRVEGPPWM*GGCLLDTGGRESGF
Trigger: AAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAACGGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 90 bp GGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTaGGAAAGTCTCCTTGGAGGAGGTGCTTCTCTGATTGAGGAATGT +
Preference number: 1 (lower is better)
Translates to: GGCLLDTGGRESGFP*ESLLGGGASLIEEC
Trigger: ACATTCCTCAATCAGAGAAGCACCTCCTCCAAGGAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 90 bp CAGCATGTGATCCGGGCTGTTGTTGACGAGTTCCAGATCTGCCTCTaGTACGGGGAGTCTGTTAGGATTGGGCCTTTAAGAAAAATGTGT +
Preference number: 1 (lower is better)
Translates to: QHVIRAVVDEFQICL*YGESVRIGPLRKMC
Trigger: ACACATTTTTCTTAAAGGCCCAATCCTAACAGACTCCCCGTACCAGAGGCAGATCTGGAACTCGTCAACAACAGCCCGGATCACATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 90 bp TGCTCCCAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATaGGTTGGTGTGTTTCAGAAGAGGCACCAGTTAATACTCTTCCAA +
Preference number: 1 (lower is better)
Translates to: CSQQDQKQLWGSRGI*VGVFQKRHQLILFQ
Trigger: TTGGAAGAGTATTAACTGGTGCCTCTTCTGAAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTGGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 90 bp CTTGAGTTTGTAGGAAGGGCAGACCGGCTCCATTACCAACAACTTTaGGGTAGAAAGCACAGCTCTCCTCTTTTACCCAGCACAAATGCA +
Preference number: 1 (lower is better)
Translates to: LEFVGRADRLHYQQL*GRKHSSPLLPSTNA
Trigger: TGCATTTGTGCTGGGTAAAAGAGGAGAGCTGTGCTTTCTACCCCAAAGTTGTTGGTAATGGAGCCGGTCTGCCCTTCCTACAAACTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 90 bp AAAGTGGATTTCCCTGGGAAAGTCTCCTTGGAGGAGGTGCTTCTCTaGTTGAGGAATGTTGTGAGGATACGCCACAGTGATATCATGGAC +
Preference number: 1 (lower is better)
Translates to: KVDFPGKVSLEEVLL*LRNVVRIRHSDIMD
Trigger: GTCCATGATATCACTGTGGCGTATCCTCACAACATTCCTCAATCAGAGAAGCACCTCCTCCAAGGAGACTTTCCCAGGGAAATCCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR TCA 90 bp GGAGGTGCTTCTCTGATTGAGGAATGTTGTGAGGATACGCCACAGTaGTATCATGGACAGCATCAAGGTTCTTACCTTCTCTTAGACGGT +
Preference number: 1 (lower is better)
Translates to: GGASLIEECCEDTPQ*YHGQHQGSYLLLDG
Trigger: ACCGTCTAAGAGAAGGTAAGAACCTTGATGCTGTCCATGATATCACTGTGGCGTATCCTCACAACATTCCTCAATCAGAGAAGCACCTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR TCA 90 bp AAATTCAAACTAAAGTTTCAAAGTGGAGAGCCTGTGGTTGCTCCCTaGGTCCAGGTTTTATCTTCCACGAGAGAAAAGGGCACAGGTGGT +
Preference number: 1 (lower is better)
Translates to: KFKLKFQSGEPVVAP*VQVLSSTREKGTGG
Trigger: ACCACCTGTGCCCTTTTCTCTCGTGGAAGATAAAACCTGGACTCAGGGAGCAACCACAGGCTCTCCACTTTGAAACTTTAGTTTGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 90 bp TCATGTCTTCGAAATGGCTCTTGTCATCCTTCCATTTCCTATGAATaGAGATATAGGCAGCAGCCTGCATGGCCCAACCAAATCCAGGAA +
Preference number: 1 (lower is better)
Translates to: SCLRNGSCHPSISYE*RYRQQPAWPNQIQE
Trigger: TTCCTGGATTTGGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGATGACAAGAGCCATTTCGAAGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 90 bp CCAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTaGTGTGTTTCAGAAGAGGCACCAGTTAATACTCTTCCAATAAAA +
Preference number: 1 (lower is better)
Translates to: PAGSETALGEQRNMG*CVSEEAPVNTLPIK
Trigger: TTTTATTGGAAGAGTATTAACTGGTGCCTCTTCTGAAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 90 bp ATGACAGCAATGCCTTCTTCTGGAATACCTCCTGAAGGACCTGCCTaGGGCTGTTTTACTGCTTTTACTATAAGCAGAAGGAATACACTC +
Preference number: 1 (lower is better)
Translates to: MTAMPSSGIPPEGPA*GCFTAFTISRRNTL
Trigger: GAGTGTATTCCTTCTGCTTATAGTAAAAGCAGTAAAACAGCCCCAGGCAGGTCCTTCAGGAGGTATTCCAGAAGAAGGCATTGCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR CCA 90 bp CGCATCAGGCAATTCCACAGGAACATCCAGTCCATTCTTGTCCGATaGTTCATGATAATGACACTTCTTTCTCCAGGAACAAATGCATCC +
Preference number: 1 (lower is better)
Translates to: RIRQFHRNIQSILVR*FMIMTLLSPGTNAS
Trigger: GGATGCATTTGTTCCTGGAGAAAGAAGTGTCATTATCATGAACCATCGGACAAGAATGGACTGGATGTTCCTGTGGAATTGCCTGATGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 90 bp TTATCTTCCACGAGAGAAAAGGGCACAGGTGGTCTTCTGACGTCTTaGTCAGCATACAATGTTATGAATAATGAAGGGCTTCCTGTCAAA +
Preference number: 1 (lower is better)
Translates to: LSSTREKGTGGLLTS*SAYNVMNNEGLPVK
Trigger: TTTGACAGGAAGCCCTTCATTATTCATAACATTGTATGCTGACCAAGACGTCAGAAGACCACCTGTGCCCTTTTCTCTCGTGGAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 90 bp TTTGCCTCAGAAGAAGACTGGTGCTTGGTGTGCTGGATTTTCCACTaGCTCCAAATGACAAGAATATTTGGGCAAACAATTGGTCAAAAG +
Preference number: 1 (lower is better)
Translates to: FASEEDWCLVCWIFH*LQMTRIFGQTIGQK
Trigger: CTTTTGACCAATTGTTTGCCCAAATATTCTTGTCATTTGGAGTCAGTGGAAAATCCAGCACACCAAGCACCAGTCTTCTTCTGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 90 bp TTCTACAGCATAAATAACAGCTCTAAGGCAACCACTACCTCAGCATaGAGCTCATTTCTCCACGTTAGAGTAGTGTTTACCTGCTACAGT +
Preference number: 1 (lower is better)
Translates to: FYSINNSSKATTTSA*SSFLHVRVVFTCYS
Trigger: ACTGTAGCAGGTAAACACTACTCTAACGTGGAGAAATGAGCTTCATGCTGAGGTAGTGGTTGCCTTAGAGCTGTTATTTATGCTGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR GCA 90 bp CTGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATaGACGATGCAATTATTGGGTAGGTCACTGTCAAGCAAAAACGAG +
Preference number: 1 (lower is better)
Translates to: LLGKFSSQCVYLSWQ*TMQLLGRSLSSKNE
Trigger: CTCGTTTTTGCTTGACAGTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 90 bp CAGAATCTGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATaGCAATGCACGATGCAATTATTGGGTAGGTCACTGTCAAGCAAA +
Preference number: 1 (lower is better)
Translates to: QNLLGKFSSQCVYLS*QCTMQLLGRSLSSK
Trigger: TTTGCTTGACAGTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCAGATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 90 bp GAAGGCATTAATGCCCAAAGAGTACATAAAGCAGTAAGTAGCTTCTaGGGCTGGTTCAATGCAGAAGTAAAACTAACAGGTTTGCTAACA +
Preference number: 1 (lower is better)
Translates to: EGINAQRVHKAVSSF*GWFNAEVKLTGLLT
Trigger: TGTTAGCAAACCTGTTAGTTTTACTTCTGCATTGAACCAGCCTCAGAAGCTACTTACTGCTTTATGTACTCTTTGGGCATTAATGCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR GCA 90 bp TGTCCGATGGTTCATGATAATGACACTTCTTTCTCCAGGAACAAATaGATCCCCAGTTATAATCACTTTTACACCAAACATGGTCTCCAA +
Preference number: 1 (lower is better)
Translates to: CPMVHDNDTSFSRNK*IPSYNHFYTKHGLQ
Trigger: TTGGAGACCATGTTTGGTGTAAAAGTGATTATAACTGGGGATGCATTTGTTCCTGGAGAAAGAAGTGTCATTATCATGAACCATCGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 90 bp GTTTTCTGTGAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTaGTTCGTGAATATCACAAAAGTAATCAATCATGTCTTCGAAATG +
Preference number: 1 (lower is better)
Translates to: VFCEISPFWEYEELK*FVNITKVINHVFEM
Trigger: CATTTCGAAGACATGATTGATTACTTTTGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTCACAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR TCA 90 bp TTAAATGTGGCTGTTTGTGTAAAAGTCGGTAACATGCAAGTTCTATaGTCTCCAGTCCACCAAATATTCTCTCTTGCAGCACAAAGATTA +
Preference number: 1 (lower is better)
Translates to: LNVAVCVKVGNMQVL*SPVHQIFSLAAQRL
Trigger: TAATCTTTGTGCTGCAAGAGAGAATATTTGGTGGACTGGAGATCATAGAACTTGCATGTTACCGACTTTTACACAAACAGCCACATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR GCA 90 bp GTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATaGAATTATTGGGTAGGTCACTGTCAAGCAAAAACGAGATATAAT +
Preference number: 1 (lower is better)
Translates to: VSSVHNVFTFHGNAR*NYWVGHCQAKTRYN
Trigger: ATTATATCTCGTTTTTGCTTGACAGTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 90 bp GTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTaGGTAGGTCACTGTCAAGCAAAAACGAGATATAATTACAGAGAA +
Preference number: 1 (lower is better)
Translates to: VHNVFTFHGNARCNY*VGHCQAKTRYNYRE
Trigger: TTCTCTGTAATTATATCTCGTTTTTGCTTGACAGTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTGGGCACCACCTGCCTaGGTACCTGGAGGGACAGCG +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFWAPPA*VPGGTA
Trigger: CGCTGTCCCTCCAGGTACTCAGGCAGGTGGTGCCCA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 90 bp GGCACCAGAGTTGAAGGTCCTCCTTGGATGTGGGGAGGGTGTCTATaGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: GTRVEGPPWMWGGCL*DTGGRESGFPWESL
Trigger: GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGGAGGACCTTCAACTCTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CAA 90 bp ACGCAGCCTCTCTTCTTTCTCTTCCCACCGTTTGTGGCACCAGAGTaGAAGGTCCTCCTTGGATGTGGGGAGGGTGTCTATTGGATACCG +
Preference number: 2 (lower is better)
Translates to: TQPLFFLFPPFVAPE*KVLLGCGEGVYWIP
Trigger: CGGTATCCAATAGACACCCTCCCCACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAACGGTGGGAAGAGAAAGAAGAGAGGCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTCAGCGCTCACCTCAATaGGGTGACCTGGGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFQRSPQ*GDLGSP
Trigger: TGGACTGCCCAGGTCACCTCATTGAGGTGAGCGCTG...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGATCCGGGCTGTTGTTaGCGAGTTCCAGATCTGCCT +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFDPGCC*RVPDLP
Trigger: AGGCAGATCTGGAACTCGTCAACAACAGCCCGGATC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CCTTGGATGTGGGGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCACAAGGCGGTTGTTaGTCCAGCGATACCAAGATG +
Preference number: 2 (lower is better)
Translates to: PWMWGGCLLDTGGRESGFPQGGC*SSDTKM
Trigger: CATCTTGGTATCGCTGGATCAACAACCGCCTTGTGG...AAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAGGATGAGATGGGTTTaGCGCAGGAAGAAGGACGCC +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFRMRWV*RRKKDA
Trigger: GGCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAAAGTGGAGAGCCTGTaGTTGCTCCCTGAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFKVESL*LLPESR
Trigger: CCTGGACTCAGGGAGCAACCACAGGCTCTCCACTTT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCGAGGAGGTGCTTCTCTaGTTGAGGAATGTTGTGAGG +
Preference number: 2 (lower is better)
Translates to: GCLLDTGGRESGFPWESLEEVLL*LRNVVR
Trigger: CCTCACAACATTCCTCAATCAGAGAAGCACCTCCTC...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR TCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTCCAGTAACAGCATGTaGTCCGGGCTGTTGTTGACG +
Preference number: 2 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKSSNSM*SGLLLT
Trigger: CGTCAACAACAGCCCGGATCACATGCTGTTACTGGA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CCTTGGATGTGGGGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTTCCCTTCTGGGAATATaGGGAGTTGAAGTGGTTCGT +
Preference number: 2 (lower is better)
Translates to: PWMWGGCLLDTGGRESGFSLLGI*GVEVVR
Trigger: ACGAACCACTTCAACTCCTCATATTCCCAGAAGGGA...AAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTTCCAGATCTGCCTCTaGTACGGGGAGTCTGTTAGG +
Preference number: 2 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKFQICL*YGESVR
Trigger: CCTAACAGACTCCCCGTACCAGAGGCAGATCTGGAA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACACCTGCCTGAGTACCTaGAGGGACAGCGCTCACCTC +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHTCLST*RDSAHL
Trigger: GAGGTGAGCGCTGTCCCTCCAGGTACTCAGGCAGGT...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAGAAAAGGGCACAGGTaGTCTTCTGACGTCTTGGTC +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFRKGHR*SSDVLV
Trigger: GACCAAGACGTCAGAAGACCACCTGTGCCCTTTTCT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGCCTCAGAAGAAGACTaGTGCTTGGTGTGCTGGATT +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFASEED*CLVCWI
Trigger: AATCCAGCACACCAAGCACCAGTCTTCTTCTGAGGC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 90 bp TCCAATAATGCCACAGGTAGGGTGAGCCATGTTGCCACAAGGCGGTaGTTGATCCAGCGATACCAAGATGGGTTTACAAACATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: SNNATGRVSHVATRR*LIQRYQDGFTNIKG
Trigger: ACCTTTGATGTTTGTAAACCCATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGCAACATGGCTCACCCTACCTGTGGCATTATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CAA 90 bp CACATTGCAGGGCTGAACAGGGTCCAATACAGTATAGAGAGCAATTaGACCACAAGGACCCTGAGTTCAGACTTGCAAGGTGGAATGACA +
Preference number: 2 (lower is better)
Translates to: HIAGLNRVQYSIESN*TTRTLSSDLQGGMT
Trigger: TGTCATTCCACCTTGCAAGTCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTGTTCAGCCCTGCAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGATCCGGGCTGTTGTTaGCGAGTTCCAGATCTGCCT +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHDPGCC*RVPDLP
Trigger: AGGCAGATCTGGAACTCGTCAACAACAGCCCGGATC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACCTCACCTCAATGAGGTaGCCTGGGCAGTCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHLTSMR*PGQSSN
Trigger: GTTACTGGACTGCCCAGGTCACCTCATTGAGGTGAG...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATGGGCACCACCTGCCTaGGTACCTGGAGGGACAGCG +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEWAPPA*VPGGTA
Trigger: CGCTGTCCCTCCAGGTACTCAGGCAGGTGGTGCCCA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTGCGGTGCGGTGCAGTaGGGTGAGGTGGGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLCGAVQ*GEVGRC
Trigger: ACACCTGCCCACCTCACCTCACTGCACCGCACCGCA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCTCCATTTCCTATGAATaGAGATATAGGCAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GCLLDTGGRESGFPWESLSISYE*RYRQQP
Trigger: AGGCTGCTGCCTATATCTTCATTCATAGGAAATGGA...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR GCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGGCTTCCTGTCAAAATaGTTGATCGGTTTCACGACA +
Preference number: 2 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFGFLSK*LIGFTT
Trigger: TGTCGTGAAACCGATCAAGCATTTTGACAGGAAGCC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACAGGATGAGATGGGTTTaGCGCAGGAAGAAGGACGCC +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHRMRWV*RRKKDA
Trigger: GGCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCT...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp CTGTACAAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTGTTGAAGGTCCTCCTTaGATGTGGGGAGGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: LYKYMSRHIAGLNRVQYSVEGPP*MWGGCL
Trigger: TAGACACCCTCCCCACATCCAAGGAGGACCTTCAAC...ACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR TCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCGCACAGGTGGTCTTCTaGCGTCTTGGTCAGCATACA +
Preference number: 2 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCAQVVF*RLGQHT
Trigger: TGTATGCTGACCAAGACGTCAGAAGACCACCTGTGC...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGCACAGGTGGTCTTCTaGCGTCTTGGTCAGCATACA +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHAQVVF*RLGQHT
Trigger: TGTATGCTGACCAAGACGTCAGAAGACCACCTGTGC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTGCGGTGCAGTGAGGTaGGGTGGGCAGGTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLCGAVR*GGQVWK
Trigger: CTTCCACACCTGCCCACCTCACCTCACTGCACCGCA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCTGGAGAGCCTGTGGTTaGTCCCTGAGTCCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCWRACG*SLSPGF
Trigger: AAAACCTGGACTCAGGGAGCAACCACAGGCTCTCCA...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 90 bp AATAATGCCACAGGTAGGGTGAGCCATGTTGCCACAAGGCGGTTGTaGATCCAGCGATACCAAGATGGGTTTACAAACATCAAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: NNATGRVSHVATRRL*IQRYQDGFTNIKGK
Trigger: TTTACCTTTGATGTTTGTAAACCCATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGCAACATGGCTCACCCTACCTGTGGCATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAACAGCGCTCACCTCAATaGGGTGACCTGGGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEQRSPQ*GDLGSP
Trigger: TGGACTGCCCAGGTCACCTCATTGAGGTGAGCGCTG...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp ACTTCTTTCTCCAGGAACAAATGCATCCCCAGTTATAATCACTTTTACACCAAAATGCCACAGGTAGGGTaGGCCATGTTGCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: TSFSRNKCIPSYNHFYTKMPQVG*AMLPQG
Trigger: GCCTTGTGGCAACATGGCTCACCCTACCTGTGGCAT...TTTGGTGTAAAAGTGATTATAACTGGGGATGCATTTGTTCCTGGAGAAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR TCA 90 bp CTGTACAAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTACTTGCTGTTTTCTGTaGGATCAGTCCCTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: LYKYMSRHIAGLNRVQYSTCCFL*DQSLLG
Trigger: TCCCAGAAGGGACTGATCTCACAGAAAACAGCAAGT...ACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTTGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCAGAAAAGGGCACAGGTaGTCTTCTGACGTCTTGGTC +
Preference number: 2 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCRKGHR*SSDVLV
Trigger: GACCAAGACGTCAGAAGACCACCTGTGCCCTTTTCT...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCTCCATTCTTGTCCGATaGTTCATGATAATGACACTT +
Preference number: 2 (lower is better)
Translates to: GCLLDTGGRESGFPWESLSILVR*FMIMTL
Trigger: AAGTGTCATTATCATGAACCATCGGACAAGAATGGA...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CCA 90 bp ATAAAAATTCTTCTCCCCTTGATAGAAGGAACGCAGCCTCTCTTCTTTCTCTTCGGGGAGGGTGTCTATTaGATACCGGTGGACGTGAAA +
Preference number: 2 (lower is better)
Translates to: IKILLPLIEGTQPLFFLFGEGVY*IPVDVK
Trigger: TTTCACGTCCACCGGTATCCAATAGACACCCTCCCC...GAAGAGAAAGAAGAGAGGCTGCGTTCCTTCTATCAAGGGGAGAAGAATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR TCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCGCAGTAAGTAGCTTCTaGGGCTGGTTCAATGCAGAA +
Preference number: 2 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCAVSSF*GWFNAE
Trigger: TTCTGCATTGAACCAGCCTCAGAAGCTACTTACTGC...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp ACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTCACTGCCAGTTTCAGTTTTCTaGATATGGCTAGCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: TGSGSSISLSSPPHLVSLPVSVF*IWLASS
Trigger: AGAACTGGCTAGCCATATGCAGAAAACTGAAACTGG...CAGTGAGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR CCA 90 bp GCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCAATTGCCATTTGGACTaGTGTGAGATGGTATCTCAT +
Preference number: 2 (lower is better)
Translates to: AYTGSGSSISLSSPPHLVNCHLD*CEMVSH
Trigger: ATGAGATACCATCTCACACCAGTCCAAATGGCAATT...GACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR CAA 90 bp GTCAACAGTGTTCAGCCTCAACCAGTGCTTTCTCACAGAATCTGCTaGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCA +
Preference number: 2 (lower is better)
Translates to: VNSVQPQPVLSHRIC*VSSVHNVFTFHGNA
Trigger: TGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCAGATTCTGTGAGAAAGCACTGGTTGAGGCTGAACACTGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAACTCACCTCAATGAGGTaGCCTGGGCAGTCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLELTSMR*PGQSSN
Trigger: GTTACTGGACTGCCCAGGTCACCTCATTGAGGTGAG...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACTCCTGTCAAAATGCTTaGTCGGTTTCACGACAAAGG +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHSCQNA*SVSRQR
Trigger: CCTTTGTCGTGAAACCGATCAAGCATTTTGACAGGA...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACTATTTTCTGCAGCTCTaGCCAGCATCCTTCTTACAC +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHYFLQL*PASFLH
Trigger: GTGTAAGAAGGATGCTGGTCAGAGCTGCAGAAAATA...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGACGAGTTCCAGATCTaGCTCTGGTACGGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEDEFQI*LWYGES
Trigger: AGACTCCCCGTACCAGAGGCAGATCTGGAACTCGTC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGACGAGTTCCAGATCTaGCTCTGGTACGGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLDEFQI*LWYGES
Trigger: AGACTCCCCGTACCAGAGGCAGATCTGGAACTCGTC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp CCTAGGCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCAACGTCATTATGTGTTaGATGACTGTATATCCCAAA +
Preference number: 2 (lower is better)
Translates to: PRPTQGQDHQYHCLHLHINVIMC*MTVYPK
Trigger: TTTGGGATATACAGTCATGCAACACATAATGACGTT...GATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGCCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGAAAGTGGAGAGCCTGTaGTTGCTCCCTGAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLKVESL*LLPESR
Trigger: CCTGGACTCAGGGAGCAACCACAGGCTCTCCACTTT...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp ATAAAAATTCTTCTCCCCTTGATAGAAGGAACGCAGCCTCTCTTCTTTCTCTTCGAAAGTGGATTTCCCTaGGAAAGTCTCCTTGGAGGA +
Preference number: 2 (lower is better)
Translates to: IKILLPLIEGTQPLFFLFESGFP*ESLLGG
Trigger: TCCTCCAAGGAGACTTTCCCAGGGAAATCCACTTTC...GAAGAGAAAGAAGAGAGGCTGCGTTCCTTCTATCAAGGGGAGAAGAATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR GCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACAGGATAAACCATTACTaGCCTGTCTGCAAGCCATTT +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHRINHY*PVCKPF
Trigger: AAATGGCTTGCAGACAGGGCAGTAATGGTTTATCCT...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCAGGATAAACCATTACTaGCCTGTCTGCAAGCCATTT +
Preference number: 2 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCRINHY*PVCKPF
Trigger: AAATGGCTTGCAGACAGGGCAGTAATGGTTTATCCT...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCCTGAGGCTGGTTCAATaGAGAAGTAAAACTAACAGG +
Preference number: 2 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCLRLVQ*RSKTNR
Trigger: CCTGTTAGTTTTACTTCTGCATTGAACCAGCCTCAG...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp CAGGCAATTCCACAGGAACATCCAGTCCATTCTTGTCCGATGGTTCATGATAATTTCTCCAGGAACAAATaGATCCCCAGTTATAATCAC +
Preference number: 2 (lower is better)
Translates to: QAIPQEHPVHSCPMVHDNFSRNK*IPSYNH
Trigger: GTGATTATAACTGGGGATGCATTTGTTCCTGGAGAA...ATTATCATGAACCATCGGACAAGAATGGACTGGATGTTCCTGTGGAATTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTTCCAGATCTGCCTCTaGTACGGGGAGTCTGTTAGG +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLFQICL*YGESVR
Trigger: CCTAACAGACTCCCCGTACCAGAGGCAGATCTGGAA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGGTCTTCTGACGTCTTaGTCAGCATACAATGTTATG +
Preference number: 2 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHGLLTS*SAYNVM
Trigger: CATAACATTGTATGCTGACCAAGACGTCAGAAGACC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR TCA 90 bp CTGTACAAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTAAATTTTCTCCAATCTaGGGTAGCTATATCGCATCA +
Preference number: 2 (lower is better)
Translates to: LYKYMSRHIAGLNRVQYSKFSPI*GSYIAS
Trigger: TGATGCGATATAGCTACCTCAGATTGGAGAAAATTT...ACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTTGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR GCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCCATTACTGCCCTGTCTaGAAGCCATTTGTTGTTTTA +
Preference number: 2 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCHYCPV*KPFVVL
Trigger: TAAAACAACAAATGGCTTGCAGACAGGGCAGTAATG...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTGAATCCTTTCCCCATTaGTTGTTTTTGTCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPESFPH*LFLSGL
Trigger: CAAACCTGACAAAAACAAGCAATGGGGAAAGGATTC...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGCCTCAGAAGAAGACTaGTGCTTGGTGTGCTGGATT +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEASEED*CLVCWI
Trigger: AATCCAGCACACCAAGCACCAGTCTTCTTCTGAGGC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp AAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTATAGAGCTTTTACACCAAACATaGTCTCCAATAATGCCACAG +
Preference number: 2 (lower is better)
Translates to: KYMSRHIAGLNRVQYSIELLHQT*SPIMPQ
Trigger: CTGTGGCATTATTGGAGACCATGTTTGGTGTAAAAG...CTCTATACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CAA 90 bp CTTGCTGTTTTCTGTGAGATCAGTCCCTTCTGGGAATATGAGGAGTaGAAGTGGTTCGTGAATATCACAAAAGTAATCAATCATGTCTTC +
Preference number: 2 (lower is better)
Translates to: LAVFCEISPFWEYEE*KWFVNITKVINHVF
Trigger: GAAGACATGATTGATTACTTTTGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTCACAGAAAACAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR GCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAACCCCGATCACTCCCTaGTATGTACACAGTATCGAA +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLETPITP*YVHSIE
Trigger: TTCGATACTGTGTACATAGCAGGGAGTGATCGGGGT...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp AGAGGTAATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGCTTTGGTTGCAATTaGTTTTGTCATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: RGNNKHGAVMSYDSNAFFCFGCN*FCHLHH
Trigger: ATGATGAAGATGACAAAAGCAATTGCAACCAAAGCA...GAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTATTACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR CCA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCATTGTCTTGGCTATATaGGCTTTTTGTTGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSIVLAI*AFCWFH
Trigger: ATGGAACCAACAAAAAGCCCATATAGCCAAGACAAT...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR CCA 90 bp CTGTACAAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTTATGAGGAGTTGAAGTaGTTCGTGAATATCACAAAA +
Preference number: 2 (lower is better)
Translates to: LYKYMSRHIAGLNRVQYSYEELK*FVNITK
Trigger: TTTTGTGATATTCACGAACCACTTCAACTCCTCATA...ACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTTGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CAA 90 bp TATAGTTTGAAGTCAGGTAATGTGATGCCTCCAGCTGTGTTCTTTTaGCTTAAGATTGTCTTGGCTATATGGGCTTTTTGTTGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: YSLKSGNVMPPAVFF*LKIVLAIWAFCWFH
Trigger: ATGGAACCAACAAAAAGCCCATATAGCCAAGACAATCTTAAGCAAAAAGAACACAGCTGGAGGCATCACATTACCTGACTTCAAACTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTATTTTCTGCAGCTCTaGCCAGCATCCTTCTTACAC +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLYFLQL*PASFLH
Trigger: GTGTAAGAAGGATGCTGGTCAGAGCTGCAGAAAATA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATCAGAAGAAGACTGGTaGTTGGTGTGCTGGATTTTC +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLESEEDW*LVCWIF
Trigger: GAAAATCCAGCACACCAAGCACCAGTCTTCTTCTGA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGAAGAAGACTGGTGCTTaGTGTGCTGGATTTTCCACT +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLKKTGA*CAGFST
Trigger: AGTGGAAAATCCAGCACACCAAGCACCAGTCTTCTT...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGCACGATGCAATTATTaGGTAGGTCACTGTCAAGCA +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLARCNY*VGHCQA
Trigger: TGCTTGACAGTGACCTACCCAATAATTGCATCGTGC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAACAGAGGAATATGGGTTaGTGTGTTTCAGAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEQRNMG*CVSEEA
Trigger: TGCCTCTTCTGAAACACACCAACCCATATTCCTCTG...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGCTGAGGCTGGTTCAATaGAGAAGTAAAACTAACAGG +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLLRLVQ*RSKTNR
Trigger: CCTGTTAGTTTTACTTCTGCATTGAACCAGCCTCAG...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR GCA 90 bp CATCAGCATCATCACAAACATGTGATGATGTCACCAGGTGATAGGAATTTTCTACAGCTGTGTTCTTTTTaGTTAAGATTGTCTTGGCTA +
Preference number: 2 (lower is better)
Translates to: HQHHHKHVMMSPGDRNFLQLCSF*LRLSWL
Trigger: TAGCCAAGACAATCTTAAGCAAAAAGAACACAGCTG...TAGAAAATTCCTATCACCTGGTGACATCATCACATGTTTGTGATGATGCTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR GCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTACCTTTCATGGCAATaGACGATGCAATTATTGGGT +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLYLSWQ*TMQLLG
Trigger: ACCCAATAATTGCATCGTGCATTGCCATGAAAGGTA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 90 bp GTAACATGCAAGTTCTATGATCTCCAGTCCACCAAATATTCTCTCTaGCAGCACAAAGATTACAATGGTGATTATAAAATACCACTTAAC +
Preference number: 2 (lower is better)
Translates to: VTCKFYDLQSTKYSL*QHKDYNGDYKIPLN
Trigger: GTTAAGTGGTATTTTATAATCACCATTGTAATCTTTGTGCTGCAAGAGAGAATATTTGGTGGACTGGAGATCATAGAACTTGCATGTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTGTGTTTACCTTTCATaGCAATGCACGATGCAATTA +
Preference number: 2 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLCVYLS*QCTMQL
Trigger: TAATTGCATCGTGCATTGCCATGAAAGGTAAACACA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 72 bp GGCAGTCCAGTAACAGCATGTGATCCGGGCTGTTGTTaGCGAGTTCCAGATCTGCCTCTGGTACGGGGAGTC +
Preference number: 3 (lower is better)
Translates to: GSPVTACDPGCC*RVPDLPLVRGV
Trigger: GACTCCCCGTACCAGAGGCAGATCTGGAACTCGTCAACAACAGCCCGGATCACATGCTGTTACTGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 72 bp CTGCCTGAGTACCTGGAGGGACAGCGCTCACCTCAATaGGGTGACCTGGGCAGTCCAGTAACAGCATGTGAT +
Preference number: 3 (lower is better)
Translates to: LPEYLEGQRSPQ*GDLGSPVTACD
Trigger: ATCACATGCTGTTACTGGACTGCCCAGGTCACCTCATTGAGGTGAGCGCTGTCCCTCCAGGTACTCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR GCA 72 bp CATGTGATCCGGGCTGTTGTTGACGAGTTCCAGATCTaGCTCTGGTACGGGGAGTCTGTTAGGATTGGGCCT +
Preference number: 3 (lower is better)
Translates to: HVIRAVVDEFQI*LWYGESVRIGP
Trigger: AGGCCCAATCCTAACAGACTCCCCGTACCAGAGGCAGATCTGGAACTCGTCAACAACAGCCCGGATCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 72 bp GGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTaGCGCAGGAAGAAGGACGCCAAGGGAGGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: GFHFLILRMRWV*RRKKDAKGGSL
Trigger: CAGGCTCCCTCCCTTGGCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 72 bp ATCCGGGCTGTTGTTGACGAGTTCCAGATCTGCCTCTaGTACGGGGAGTCTGTTAGGATTGGGCCTTTAAGA +
Preference number: 3 (lower is better)
Translates to: IRAVVDEFQICL*YGESVRIGPLR
Trigger: TCTTAAAGGCCCAATCCTAACAGACTCCCCGTACCAGAGGCAGATCTGGAACTCGTCAACAACAGCCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 72 bp CAAAGGGGGTTCCATTTTCTGATCTTAAGGATGAGATaGGTTTGGCGCAGGAAGAAGGACGCCAAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: QRGFHFLILRMR*VWRRKKDAKGG
Trigger: CCCTCCCTTGGCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 72 bp GTAGGAAGGGCAGACCGGCTCCATTACCAACAACTTTaGGGTAGAAAGCACAGCTCTCCTCTTTTACCCAGC +
Preference number: 3 (lower is better)
Translates to: VGRADRLHYQQL*GRKHSSPLLPS
Trigger: GCTGGGTAAAAGAGGAGAGCTGTGCTTTCTACCCCAAAGTTGTTGGTAATGGAGCCGGTCTGCCCTTCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 72 bp TCTTCTTTCTCTTCCCACCGTTTGTGGCACCAGAGTTaGAGGTCCTCCTTGGATGTGGGGAGGGTGTCTATT +
Preference number: 3 (lower is better)
Translates to: SSFSSHRLWHQS*RSSLDVGRVSI
Trigger: AATAGACACCCTCCCCACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAACGGTGGGAAGAGAAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 72 bp CTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTaGGAAAGTCTCCTTGGAGGAGGTGCTTCTCTGATT +
Preference number: 3 (lower is better)
Translates to: LLDTGGRESGFP*ESLLGGGASLI
Trigger: AATCAGAGAAGCACCTCCTCCAAGGAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp ACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTCACTGTCTCGCTCCACAGCCTaGCCAGCATCTGTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: TGSGSSISLSSPPHLVSLSRSTA*PASVVS
Trigger: TGAAACAACAGATGCTGGCAAGGCTGTGGAGCGAGA...CAGTGAGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR TCA 72 bp CTAAAGTTTCAAAGTGGAGAGCCTGTGGTTGCTCCCTaGGTCCAGGTTTTATCTTCCACGAGAGAAAAGGGC +
Preference number: 3 (lower is better)
Translates to: LKFQSGEPVVAP*VQVLSSTREKG
Trigger: GCCCTTTTCTCTCGTGGAAGATAAAACCTGGACTCAGGGAGCAACCACAGGCTCTCCACTTTGAAACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp AATCCAGGAACACCTTTGAGACTCGCTTTGAGGCAAATTTTCTCCAATCTGAGGGCCACAAGGCGGTTGTaGATCCAGCGATACCAAGAT +
Preference number: 3 (lower is better)
Translates to: NPGTPLRLALRQIFSNLRATRRL*IQRYQD
Trigger: ATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGC...CCTCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp CCTTGGATGTGGGGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTGCATTACTTCGAGACTaGCTGTTTTCTGTGAGATCA +
Preference number: 3 (lower is better)
Translates to: PWMWGGCLLDTGGRESGFALLRD*LFSVRS
Trigger: TGATCTCACAGAAAACAGCAAGTCTCGAAGTAATGC...AAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTTCCTGTCAAAATGCTaGATCGGTTTCACGACAAAG +
Preference number: 3 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFFLSKC*IGFTTK
Trigger: CTTTGTCGTGAAACCGATCAAGCATTTTGACAGGAA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 72 bp CGAAATGGCTCTTGTCATCCTTCCATTTCCTATGAATaGAGATATAGGCAGCAGCCTGCATGGCCCAACCAA +
Preference number: 3 (lower is better)
Translates to: RNGSCHPSISYE*RYRQQPAWPNQ
Trigger: TTGGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGATGACAAGAGCCATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 72 bp CAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATaGGTTGGTGTGTTTCAGAAGAGGCACCAGTTAATA +
Preference number: 3 (lower is better)
Translates to: QDQKQLWGSRGI*VGVFQKRHQLI
Trigger: TATTAACTGGTGCCTCTTCTGAAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGAAGAAGACTGGTGCTaGGTGTGCTGGATTTTCCAC +
Preference number: 3 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHEEDWC*VCWIFH
Trigger: GTGGAAAATCCAGCACACCAAGCACCAGTCTTCTTC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTCTCACAGAATCTGCTaGGTAAGTTCAGTTCACAAT +
Preference number: 3 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFSHRIC*VSSVHN
Trigger: ATTGTGAACTGAACTTACCAAGCAGATTCTGTGAGA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp ATCCTTCCATTTCCTATGAATGAAGATATAGGCAGCAGCCTGCATGGCCCAACCCCTTTGAGACTCGCTTaGAGGCAAATTTTCTCCAAT +
Preference number: 3 (lower is better)
Translates to: ILPFPMNEDIGSSLHGPTPLRLA*RQIFSN
Trigger: ATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGG...GGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp AAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTATAGAGTTTGTGGCACCAGAGTaGAAGGTCCTCCTTGGATGT +
Preference number: 3 (lower is better)
Translates to: KYMSRHIAGLNRVQYSIEFVAPE*KVLLGC
Trigger: ACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAA...CTCTATACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 72 bp CCAGGTTTTATCTTCCACGAGAGAAAAGGGCACAGGTaGTCTTCTGACGTCTTGGTCAGCATACAATGTTAT +
Preference number: 3 (lower is better)
Translates to: PGFIFHERKGHR*SSDVLVSIQCY
Trigger: ATAACATTGTATGCTGACCAAGACGTCAGAAGACCACCTGTGCCCTTTTCTCTCGTGGAAGATAAAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 72 bp TCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTaGTGTGTTTCAGAAGAGGCACCAGTTAATACTCTT +
Preference number: 3 (lower is better)
Translates to: SETALGEQRNMG*CVSEEAPVNTL
Trigger: AAGAGTATTAACTGGTGCCTCTTCTGAAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 72 bp TCTCTGATTGAGGAATGTTGTGAGGATACGCCACAGTaGTATCATGGACAGCATCAAGGTTCTTACCTTCTC +
Preference number: 3 (lower is better)
Translates to: SLIEECCEDTPQ*YHGQHQGSYLL
Trigger: GAGAAGGTAAGAACCTTGATGCTGTCCATGATATCACTGTGGCGTATCCTCACAACATTCCTCAATCAGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR GCA 72 bp ATTCAAACTAAAGTTTCAAAGTGGAGAGCCTGTGGTTaGTCCCTGAGTCCAGGTTTTATCTTCCACGAGAGA +
Preference number: 3 (lower is better)
Translates to: IQTKVSKWRACG*SLSPGFIFHER
Trigger: TCTCTCGTGGAAGATAAAACCTGGACTCAGGGAGCAACCACAGGCTCTCCACTTTGAAACTTTAGTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR GCA 72 bp CAATATCACTGTCTTCACCTCCACATCTTGTCTCACTaGAAGGTCTTCAGAGGTAATAACAAGCATGGAGCT +
Preference number: 3 (lower is better)
Translates to: QYHCLHLHILSH*KVFRGNNKHGA
Trigger: AGCTCCATGCTTGTTATTACCTCTGAAGACCTTGCAGTGAGACAAGATGTGGAGGTGAAGACAGTGATATTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR CCA 72 bp ACGAGAGAAAAGGGCACAGGTGGTCTTCTGACGTCTTaGTCAGCATACAATGTTATGAATAATGAAGGGCTT +
Preference number: 3 (lower is better)
Translates to: TREKGTGGLLTS*SAYNVMNNEGL
Trigger: AAGCCCTTCATTATTCATAACATTGTATGCTGACCAAGACGTCAGAAGACCACCTGTGCCCTTTTCTCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 72 bp TCGAGACTTGCTGTTTTCTGTGAGATCAGTCCCTTCTaGGAATATGAGGAGTTGAAGTGGTTCGTGAATATC +
Preference number: 3 (lower is better)
Translates to: SRLAVFCEISPF*EYEELKWFVNI
Trigger: GATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTCACAGAAAACAGCAAGTCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAAAGGATGAGATGGGTTaGGCGCAGGAAGAAGGACGC +
Preference number: 3 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEKDEMG*AQEEGR
Trigger: GCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCTT...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp ATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATACCTCCTGAAGAACGTCATTATGTGTaGCATGACTGTATATCCCAA +
Preference number: 3 (lower is better)
Translates to: MELSCPMTAMPSSGIPPEERHYV*HDCISQ
Trigger: TTGGGATATACAGTCATGCAACACATAATGACGTTC...TTCAGGAGGTATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR CAA 90 bp TGGTTCGTGAATATCACAAAAGTAATCAATCATGTCTTCGAAATGGCTCTTGTCGTTGCCACAAGGCGGTaGTTGATCCAGCGATACCAA +
Preference number: 3 (lower is better)
Translates to: WFVNITKVINHVFEMALVVATRR*LIQRYQ
Trigger: TTGGTATCGCTGGATCAACAACCGCCTTGTGGCAAC...GACAAGAGCCATTTCGAAGACATGATTGATTACTTTTGTGATATTCACGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CCA 72 bp CAATTCCACAGGAACATCCAGTCCATTCTTGTCCGATaGTTCATGATAATGACACTTCTTTCTCCAGGAACA +
Preference number: 3 (lower is better)
Translates to: QFHRNIQSILVR*FMIMTLLSPGT
Trigger: TGTTCCTGGAGAAAGAAGTGTCATTATCATGAACCATCGGACAAGAATGGACTGGATGTTCCTGTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR TCA 72 bp GGTGCTTGGTGTGCTGGATTTTCCACTGACTCCAAATaGCAAGAATATTTGGGCAAACAATTGGTCAAAAGT +
Preference number: 3 (lower is better)
Translates to: GAWCAGFSTDSK*QEYLGKQLVKS
Trigger: ACTTTTGACCAATTGTTTGCCCAAATATTCTTGTCATTTGGAGTCAGTGGAAAATCCAGCACACCAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 72 bp ATAAATAACAGCTCTAAGGCAACCACTACCTCAGCATaGAGCTCATTTCTCCACGTTAGAGTAGTGTTTACC +
Preference number: 3 (lower is better)
Translates to: INNSSKATTTSA*SSFLHVRVVFT
Trigger: GGTAAACACTACTCTAACGTGGAGAAATGAGCTTCATGCTGAGGTAGTGGTTGCCTTAGAGCTGTTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR GCA 72 bp TATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTaGTATGTACACAGTATCGAAATTACATTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: YSGPSYFTPITP*YVHSIEITFRD
Trigger: ATCTCTGAATGTAATTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR GCA 72 bp GTTCACAATGTGTTTACCTTTCATGGCAATGCACGATaGAATTATTGGGTAGGTCACTGTCAAGCAAAAACG +
Preference number: 3 (lower is better)
Translates to: VHNVFTFHGNAR*NYWVGHCQAKT
Trigger: CGTTTTTGCTTGACAGTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CCA 72 bp CTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATaGCAATGCACGATGCAATTATTGGGTAGGTCACTG +
Preference number: 3 (lower is better)
Translates to: LGKFSSQCVYLS*QCTMQLLGRSL
Trigger: CAGTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp TGGTTCGTGAATATCACAAAAGTAATCAATCATGTCTTCGAAATGGCTCTTGTCAATCCAGGAACACCTTaGAGACTCGCTTTGAGGCAA +
Preference number: 3 (lower is better)
Translates to: WFVNITKVINHVFEMALVNPGTP*RLALRQ
Trigger: TTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT...GACAAGAGCCATTTCGAAGACATGATTGATTACTTTTGTGATATTCACGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp ATAAAAATTCTTCTCCCCTTGATAGAAGGAACGCAGCCTCTCTTCTTTCTCTTCTCTTCGAAATGGCTCTaGTCATCCTTCCATTTCCTA +
Preference number: 3 (lower is better)
Translates to: IKILLPLIEGTQPLFFLFSSKWL*SSFHFL
Trigger: TAGGAAATGGAAGGATGACAAGAGCCATTTCGAAGA...GAAGAGAAAGAAGAGAGGCTGCGTTCCTTCTATCAAGGGGAGAAGAATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATGCACGATGCAATTATaGGGTAGGTCACTGTCAAGC +
Preference number: 3 (lower is better)
Translates to: SKKRLYLRNTLHTTESLECTMQL*GRSLSS
Trigger: GCTTGACAGTGACCTACCCAATAATTGCATCGTGCA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATATTGCTTTGGTTGCAATaGCTTTTGTCATCTTCATCA +
Preference number: 3 (lower is better)
Translates to: ITSMELSCPMTAMPSSGILLWLQ*LLSSSS
Trigger: TGATGAAGATGACAAAAGCAATTGCAACCAAAGCAA...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR TCA 72 bp AATGCCCAAAGAGTACATAAAGCAGTAAGTAGCTTCTaGGGCTGGTTCAATGCAGAAGTAAAACTAACAGGT +
Preference number: 3 (lower is better)
Translates to: NAQRVHKAVSSF*GWFNAEVKLTG
Trigger: ACCTGTTAGTTTTACTTCTGCATTGAACCAGCCTCAGAAGCTACTTACTGCTTTATGTACTCTTTGGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR TCA 72 bp GGTTTGCCACTAACTAGAACGTCATTATGTGTTGCATaGCTGTATATCCCAAAGGAATTCTTACACAGGTAC +
Preference number: 3 (lower is better)
Translates to: GLPLTRTSLCVA*LYIPKEFLHRY
Trigger: GTACCTGTGTAAGAATTCCTTTGGGATATACAGTCATGCAACACATAATGACGTTCTAGTTAGTGGCAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR GCA 72 bp TTTTGTCAGGTTTGTCAAAGATCAGATGGCTGTAGTTaGACGGACTTATTTCTGAGTTCTCTATTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: FCQVCQRSDGCS*TDLFLSSLFCS
Trigger: GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCTTTGACAAACCTGACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR CCA 72 bp GAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTaGTTCGTGAATATCACAAAAGTAATCAATCATGTC +
Preference number: 3 (lower is better)
Translates to: EISPFWEYEELK*FVNITKVINHV
Trigger: GACATGATTGATTACTTTTGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR-3UTR CAA 90 bp CATCAGCATCATCACAAACATGTGATGATGTCACCAGGTGATAGGAATTTTCTATTGTTTTTGTCAGGTTaGTCAAAGATCAGATGGCTG +
Preference number: 3 (lower is better)
Translates to: HQHHHKHVMMSPGDRNFLLFLSG*SKIRWL
Trigger: CAGCCATCTGATCTTTGACAAACCTGACAAAAACAA...TAGAAAATTCCTATCACCTGGTGACATCATCACATGTTTGTGATGATGCTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR CCA 72 bp GTGTTTACCTTTCATGGCAATGCACGATGCAATTATTaGGTAGGTCACTGTCAAGCAAAAACGAGATATAAT +
Preference number: 3 (lower is better)
Translates to: VFTFHGNARCNY*VGHCQAKTRYN
Trigger: ATTATATCTCGTTTTTGCTTGACAGTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATTCCTGTCAAAATGCTaGATCGGTTTCACGACAAAG +
Preference number: 3 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEFLSKC*IGFTTK
Trigger: CTTTGTCGTGAAACCGATCAAGCATTTTGACAGGAA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR-3UTR CAA 90 bp CATCAGCATCATCACAAACATGTGATGATGTCACCAGGTGATAGGAATTTTCTATCTTTTTGCTTAAGATaGTCTTGGCTATATGGGCTT +
Preference number: 3 (lower is better)
Translates to: HQHHHKHVMMSPGDRNFLSFCLR*SWLYGL
Trigger: AAGCCCATATAGCCAAGACAATCTTAAGCAAAAAGA...TAGAAAATTCCTATCACCTGGTGACATCATCACATGTTTGTGATGATGCTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR-3UTR CAA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATCTCACAGAATCTGCTaGGTAAGTTCAGTTCACAAT +
Preference number: 3 (lower is better)
Translates to: SKKRLYLRNTLHTTESLESHRIC*VSSVHN
Trigger: ATTGTGAACTGAACTTACCAAGCAGATTCTGTGAGA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR GCA 72 bp GTTCATGATAATGACACTTCTTTCTCCAGGAACAAATaGATCCCCAGTTATAATCACTTTTACACCAAACAT +
Preference number: 3 (lower is better)
Translates to: VHDNDTSFSRNK*IPSYNHFYTKH
Trigger: ATGTTTGGTGTAAAAGTGATTATAACTGGGGATGCATTTGTTCCTGGAGAAAGAAGTGTCATTATCATGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR GCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTCGACGCCGAGTGGGGTaGGTGGGCAAGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFRRRVG*VGKLGL
Trigger: GAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCG...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAACCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKPRDAE*GAWASW
Trigger: CCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGG...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp ATCCTTCCATTTCCTATGAATGAAGATATAGGCAGCAGCCTGCATGGCCCAACCCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILPFPMNEDIGSSLHGPTPRDAE*GAWASW
Trigger: CCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGG...GGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR GCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGCGACGCCGAGTGGGGTaGGTGGGCAAGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKRRRVG*VGKLGL
Trigger: GAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCG...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGCCGAGTGGGGTGCGTaGGCAAGCTGGGGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFAEWGA*ASWGSV
Trigger: TACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTQGQDHQYHCLHLHILSPRDAE*GAWASW
Trigger: CCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGG...AGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTGGGCACCACCTGCCTaGGTACCTGGAGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKWAPPA*VPGGTA
Trigger: CGCTGTCCCTCCAGGTACTCAGGCAGGTGGTGCCCA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGAGGTAATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCCGACGCCGAGTGGGGTaGGTGGGCAAGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RGNNKHGAVMSYDSNAFFRRRVG*VGKLGL
Trigger: GAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCG...GAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTATTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp ATCCTTCCATTTCCTATGAATGAAGATATAGGCAGCAGCCTGCATGGCCCAACCGGTGCGTGGGCAAGCTaGGGCTCCGTAGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: ILPFPMNEDIGSSLHGPTGAWAS*GSVGVT
Trigger: TGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACC...GGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp ACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTCACTGGCCGAGTGGGGTGCGTaGGCAAGCTGGGGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: TGSGSSISLSSPPHLVSLAEWGA*ASWGSV
Trigger: TACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGC...CAGTGAGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCPRDAE*GAWASW
Trigger: CCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGG...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCATGCCACAGGTAGGGTaGGCCATGTTGCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: GCLLDTGGRESGFPWESLMPQVG*AMLPQG
Trigger: GCCTTGTGGCAACATGGCTCACCCTACCTGTGGCAT...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR GCA 90 bp ACCAAATCCAGGAACACCTTTGAGACTCGCTTTGAGGCAAATTTTCTCCAATCTCGACGCCGAGTGGGGTaGGTGGGCAAGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TKSRNTFETRFEANFLQSRRRVG*VGKLGL
Trigger: GAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCG...AGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAGACAAGCAGCTGCTCTaGCTCTGGTGCGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKDKQLL*LWCGAV
Trigger: CACCGCACCGCACCAGAGCCAGAGCAGCTGCTTGTC...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 72 bp GGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTaGGCGCAGGAAGAAGGACGCCAAGGGAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GVPFSDLKDEMG*AQEEGRQGREP
Trigger: AGGCTCCCTCCCTTGGCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACCCAGCCTCCCACCTGTaGCAAGCAGGGCACGCCGCG +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYPASHL*QAGHAA
Trigger: CGCGGCGTGCCCTGCTTGTCACAGGTGGGAGGCTGG...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309052.8
CDS-3UTR TCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGCAGCGCTCACCTCAATaGGGTGACCTGGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKQRSPQ*GDLGSP
Trigger: TGGACTGCCCAGGTCACCTCATTGAGGTGAGCGCTG...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CCTTGGATGTGGGGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTAGGCAGCAGCCTGCATaGCCCAACCAAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PWMWGGCLLDTGGRESGFRQQPA*PNQIQE
Trigger: TTCCTGGATTTGGTTGGGCCATGCAGGCTGCTGCCT...AAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAACCTGCCTGAGTACCTaGAGGGACAGCGCTCACCTC +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKTCLST*RDSAHL
Trigger: GAGGTGAGCGCTGTCCCTCCAGGTACTCAGGCAGGT...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTGCAGTGAGGTGAGGTaGGCAGGTGTGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFCSEVR*AGVEGR
Trigger: TCTCCCTTCCACACCTGCCCACCTCACCTCACTGCA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 72 bp GCCACAGGTAGGGTGAGCCATGTTGCCACAAGGCGGTaGTTGATCCAGCGATACCAAGATGGGTTTACAAAC +
Preference number: 4 (lower is better)
Translates to: ATGRVSHVATRR*LIQRYQDGFTN
Trigger: GTTTGTAAACCCATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGCAACATGGCTCACCCTACCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCCCACAAGGCGGTTGTTaGTCCAGCGATACCAAGATG +
Preference number: 4 (lower is better)
Translates to: GCLLDTGGRESGFPWESLPQGGC*SSDTKM
Trigger: CATCTTGGTATCGCTGGATCAACAACCGCCTTGTGG...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp GCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCATGCCACAGGTAGGGTaGGCCATGTTGCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: AYTGSGSSISLSSPPHLVMPQVG*AMLPQG
Trigger: GCCTTGTGGCAACATGGCTCACCCTACCTGTGGCAT...GACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACTGCGGTGCGGTGCAGTaGGGTGAGGTGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHCGAVQ*GEVGRC
Trigger: ACACCTGCCCACCTCACCTCACTGCACCGCACCGCA...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp ACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTCACTGCTGTTTTTCAGCCTGTaGCAAGCAGGGCACGCCGCG +
Preference number: 4 (lower is better)
Translates to: TGSGSSISLSSPPHLVSLLFFSL*QAGHAA
Trigger: CGCGGCGTGCCCTGCTTGTCACAGGCTGAAAAACAG...CAGTGAGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCGGTGCGTGGGCAAGCTaGGGCTCCGTAGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSGAWAS*GSVGVT
Trigger: TGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACC...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCGGTCCTCCTTGGATGTaGGGAGGGTGTCTATTGGAT +
Preference number: 4 (lower is better)
Translates to: GCLLDTGGRESGFPWESLGPPWM*GGCLLD
Trigger: ATCCAATAGACACCCTCCCCACATCCAAGGAGGACC...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGGCACATTGCAGGGCTaGACAGGGTCCAATACAGTA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFGTLQG*TGSNTV
Trigger: TACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAACTCACCTCAATGAGGTaGCCTGGGCAGTCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKLTSMR*PGQSSN
Trigger: GTTACTGGACTGCCCAGGTCACCTCATTGAGGTGAG...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTCCTGTGGTTGCTCCCTaGGTCCAGGTTTTATCTTCC +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFPVVAP*VQVLSS
Trigger: GGAAGATAAAACCTGGACTCAGGGAGCAACCACAGG...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACGGTGCGTGGGCAAGCTaGGGCTCCGTAGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYGAWAS*GSVGVT
Trigger: TGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACC...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGAGGCAGCAGCCTGCATaGCCCAACCAAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKRQQPA*PNQIQE
Trigger: TTCCTGGATTTGGTTGGGCCATGCAGGCTGCTGCCT...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGGGGAGGGTGTCTATTaGATACCGGTGGACGTGAAA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFGEGVY*IPVDVK
Trigger: TTTCACGTCCACCGGTATCCAATAGACACCCTCCCC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGGTCCTCCTTGGATGTaGGGAGGGTGTCTATTGGAT +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFGPPWM*GGCLLD
Trigger: ATCCAATAGACACCCTCCCCACATCCAAGGAGGACC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAACCACAAGGCGGTTGTTaGTCCAGCGATACCAAGATG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKPQGGC*SSDTKM
Trigger: CATCTTGGTATCGCTGGATCAACAACCGCCTTGTGG...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCACTTGCTGTTTTCTGTaGGATCAGTCCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GCLLDTGGRESGFPWESLTCCFL*DQSLLG
Trigger: TCCCAGAAGGGACTGATCTCACAGAAAACAGCAAGT...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CAGGGTCCAATACAGTATAGAGAGCAATTTGACCACAAGGACCCTGAGTTCAGAGGATACCGGTGGACGTaGAAGTGGATTTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QGPIQYREQFDHKDPEFRGYRWT*KWISLG
Trigger: TCCCAGGGAAATCCACTTTCACGTCCACCGGTATCC...TCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAATTGTGGCACCAGAGTTaGAGGTCCTCCTTGGATGTG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKLWHQS*RSSLDV
Trigger: CACATCCAAGGAGGACCTTCAACTCTGGTGCCACAA...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAATCCAGTAACAGCATGTaGTCCGGGCTGTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKSSNSM*SGLLLT
Trigger: CGTCAACAACAGCCCGGATCACATGCTGTTACTGGA...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGGCACAGGTGGTCTTCTaGCGTCTTGGTCAGCATACA +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKAQVVF*RLGQHT
Trigger: TGTATGCTGACCAAGACGTCAGAAGACCACCTGTGC...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACTGCGGTGCAGTGAGGTaGGGTGGGCAGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYCGAVR*GGQVWK
Trigger: CTTCCACACCTGCCCACCTCACCTCACTGCACCGCA...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGGGTCCTCCTTGGATGTaGGGAGGGTGTCTATTGGAT +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKGPPWM*GGCLLD
Trigger: ATCCAATAGACACCCTCCCCACATCCAAGGAGGACC...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAATTCCAGATCTGCCTCTaGTACGGGGAGTCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKFQICL*YGESVR
Trigger: CCTAACAGACTCCCCGTACCAGAGGCAGATCTGGAA...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACGACAAGCAGCTGCTCTaGCTCTGGTGCGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYDKQLL*LWCGAV
Trigger: CACCGCACCGCACCAGAGCCAGAGCAGCTGCTTGTC...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAACTGCCTCGTTAATTaGCCATGGGTTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFNCLVN*PWVQKH
Trigger: GTGCTTCTGAACCCATGGTCAATTAACGAGGCAGTT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309052.8
CDS-3UTR TCA 90 bp CCTAGGCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCAACTGCCTCGTTAATTaGCCATGGGTTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PRPTQGQDHQYHCLHLHINCLVN*PWVQKH
Trigger: GTGCTTCTGAACCCATGGTCAATTAACGAGGCAGTT...GATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGCCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp ATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATACCTCCTGAACCACAAGGCGGTTGTTaGTCCAGCGATACCAAGATG +
Preference number: 4 (lower is better)
Translates to: MELSCPMTAMPSSGIPPEPQGGC*SSDTKM
Trigger: CATCTTGGTATCGCTGGATCAACAACCGCCTTGTGG...TTCAGGAGGTATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGCAGTAAGTAGCTTCTaGGGCTGGTTCAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFAVSSF*GWFNAE
Trigger: TTCTGCATTGAACCAGCCTCAGAAGCTACTTACTGC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATATTCTGGAATACCTCCTaGAGGACCTGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ITSMELSCPMTAMPSSGIFWNTS*RTCLGL
Trigger: CAGCCCCAGGCAGGTCCTTCAGGAGGTATTCCAGAA...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp CCTTGGATGTGGGGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTGAGATCAGTCCCTTCTaGGAATATGAGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PWMWGGCLLDTGGRESGFEISPF*EYEELK
Trigger: CTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC...AAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTTCAGACTTGCAAGGTaGAATGACACTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFFRLAR*NDTLSG
Trigger: ACCGGACAGAGTGTCATTCCACCTTGCAAGTCTGAA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACCTGCCTGAGTACCTaGAGGGACAGCGCTCACCTC +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYTCLST*RDSAHL
Trigger: GAGGTGAGCGCTGTCCCTCCAGGTACTCAGGCAGGT...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAGCCTCAGAAGAAGACTaGTGCTTGGTGTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKASEED*CLVCWI
Trigger: AATCCAGCACACCAAGCACCAGTCTTCTTCTGAGGC...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGGCCTCAGAAGAAGACTaGTGCTTGGTGTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKASEED*CLVCWI
Trigger: AATCCAGCACACCAAGCACCAGTCTTCTTCTGAGGC...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGGGAGCAGAGGAATATaGGTTGGTGTGTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFGSRGI*VGVFQK
Trigger: CTTCTGAAACACACCAACCCATATTCCTCTGCTCCC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 72 bp GGGCTGAACAGGGTCCAATACAGTATAGAGAGCAATTaGACCACAAGGACCCTGAGTTCAGACTTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: GLNRVQYSIESN*TTRTLSSDLQG
Trigger: ACCTTGCAAGTCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTGTTCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAGAGGATACGCCACAGTaGTATCATGGACAGCATCAA +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKEDTPQ*YHGQHQ
Trigger: TTGATGCTGTCCATGATATCACTGTGGCGTATCCTC...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGGATACCGGTGGACGTaGAAGTGGATTTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHGYRWT*KWISLG
Trigger: TCCCAGGGAAATCCACTTTCACGTCCACCGGTATCC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp GAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTGGTTCGTGAATATCACATTGTGGCACCAGAGTTaGAGGTCCTCCTTGGATGTG +
Preference number: 4 (lower is better)
Translates to: EISPFWEYEELKWFVNITLWHQS*RSSLDV
Trigger: CACATCCAAGGAGGACCTTCAACTCTGGTGCCACAA...TGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTGACTGTACAAATATATaGGTAGGCACATTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFDCTNI*VGTLQG
Trigger: GCCCTGCAATGTGCCTACTCATATATTTGTACAGTC...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTATTTTCTGCAGCTCTaGCCAGCATCCTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFYFLQL*PASFLH
Trigger: GTGTAAGAAGGATGCTGGTCAGAGCTGCAGAAAATA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATGCGGTGCGGTGCAGTaGGGTGAGGTGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLECGAVQ*GEVGRC
Trigger: ACACCTGCCCACCTCACCTCACTGCACCGCACCGCA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGACCCCGATCACTCCCTaGTATGTACACAGTATCGAA +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKTPITP*YVHSIE
Trigger: TTCGATACTGTGTACATAGCAGGGAGTGATCGGGGT...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCCCTCGCTCTGCCTCCTaGCTTCTCTTAGACGGTCTA +
Preference number: 4 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSPRSAS*LLLDGL
Trigger: TAGACCGTCTAAGAGAAGGCAGGAGGCAGAGCGAGG...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCAGGCAGCAGCCTGCATaGCCCAACCAAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSRQQPA*PNQIQE
Trigger: TTCCTGGATTTGGTTGGGCCATGCAGGCTGCTGCCT...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAGAAAGTGGATTTCCCTaGGAAAGTCTCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKESGFP*ESLLGG
Trigger: TCCTCCAAGGAGACTTTCCCAGGGAAATCCACTTTC...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGGCAATTCCACAGGAACATCCAGTCCATTCTTGTCCGATGGTTCATGATAATGTTGAAGGTCCTCCTTaGATGTGGGGAGGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: QAIPQEHPVHSCPMVHDNVEGPP*MWGGCL
Trigger: TAGACACCCTCCCCACATCCAAGGAGGACCTTCAAC...ATTATCATGAACCATCGGACAAGAATGGACTGGATGTTCCTGTGGAATTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCAAAGTGGAGAGCCTGTaGTTGCTCCCTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCKVESL*LLPESR
Trigger: CCTGGACTCAGGGAGCAACCACAGGCTCTCCACTTT...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTACTAAAGTTTCAAAGTaGAGAGCCTGTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFTKVSK*RACGCS
Trigger: GGAGCAACCACAGGCTCTCCACTTTGAAACTTTAGT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTCAGAGGAATATGGGTTaGTGTGTTTCAGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFQRNMG*CVSEEA
Trigger: TGCCTCTTCTGAAACACACCAACCCATATTCCTCTG...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACTGCAGTGAGGTGAGGTaGGCAGGTGTGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYCSEVR*AGVEGR
Trigger: TCTCCCTTCCACACCTGCCCACCTCACCTCACTGCA...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CAGGGTCCAATACAGTATAGAGAGCAATTTGACCACAAGGACCCTGAGTTCAGAAACTGCCTCGTTAATTaGCCATGGGTTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QGPIQYREQFDHKDPEFRNCLVN*PWVQKH
Trigger: GTGCTTCTGAACCCATGGTCAATTAACGAGGCAGTT...TCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CAGGGTCCAATACAGTATAGAGAGCAATTTGACCACAAGGACCCTGAGTTCAGATCCCTTCTGGGAATATaGGGAGTTGAAGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: QGPIQYREQFDHKDPEFRSLLGI*GVEVVR
Trigger: ACGAACCACTTCAACTCCTCATATTCCCAGAAGGGA...TCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTACTTGCTGTTTTCTGTaGGATCAGTCCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PTQGQDHQYHCLHLHILSTCCFL*DQSLLG
Trigger: TCCCAGAAGGGACTGATCTCACAGAAAACAGCAAGT...AGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACGGATACCGGTGGACGTaGAAGTGGATTTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYGYRWT*KWISLG
Trigger: TCCCAGGGAAATCCACTTTCACGTCCACCGGTATCC...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCTTGTGGCACCAGAGTTaGAGGTCCTCCTTGGATGTG +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCLWHQS*RSSLDV
Trigger: CACATCCAAGGAGGACCTTCAACTCTGGTGCCACAA...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp ACTTCTTTCTCCAGGAACAAATGCATCCCCAGTTATAATCACTTTTACACCAAACTGTTTTTCAGCCTGTaGCAAGCAGGGCACGCCGCG +
Preference number: 4 (lower is better)
Translates to: TSFSRNKCIPSYNHFYTKLFFSL*QAGHAA
Trigger: CGCGGCGTGCCCTGCTTGTCACAGGCTGAAAAACAG...TTTGGTGTAAAAGTGATTATAACTGGGGATGCATTTGTTCCTGGAGAAAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp CCTAGGCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCGATTCTTCCAATCCATaGGCATGGAGTGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PRPTQGQDHQYHCLHLHIDSSNP*AWSVFP
Trigger: TGGAAAAACACTCCATGCTCATGGATTGGAAGAATC...GATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp ACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTCACTGAGCTGTCATGTCCTATaGCAGCAATGCCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGSGSSISLSSPPHLVSLSCHVL*QQCLLL
Trigger: CAGAAGAAGGCATTGCTGTCATAGGACATGACAGCT...CAGTGAGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR GCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTCCCTTCCCCTGGAATaGATATATCACATCATCCAT +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFSLPLE*IYHIIH
Trigger: ATGGATGATGTGATATATGCATTCCAGGGGAAGGGA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309052.8
CDS-3UTR GCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACGACGAGTTCCAGATCTaGCTCTGGTACGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYDEFQI*LWYGES
Trigger: AGACTCCCCGTACCAGAGGCAGATCTGGAACTCGTC...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAGGATAAACCATTACTaGCCTGTCTGCAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFRINHY*PVCKPF
Trigger: AAATGGCTTGCAGACAGGGCAGTAATGGTTTATCCT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTCAGAAGAAGACTGGTaGTTGGTGTGCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKSEEDW*LVCWIF
Trigger: GAAAATCCAGCACACCAAGCACCAGTCTTCTTCTGA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACAGGCAGCAGCCTGCATaGCCCAACCAAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYRQQPA*PNQIQE
Trigger: TTCCTGGATTTGGTTGGGCCATGCAGGCTGCTGCCT...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGTTGAAGGTCCTCCTTaGATGTGGGGAGGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHVEGPP*MWGGCL
Trigger: TAGACACCCTCCCCACATCCAAGGAGGACCTTCAAC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGGGTCCAATACAGTATAGAGAGCAATTTGACCACAAGGACCCTGAGTTCAGATTCAGACTTGCAAGGTaGAATGACACTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: QGPIQYREQFDHKDPEFRFRLAR*NDTLSG
Trigger: ACCGGACAGAGTGTCATTCCACCTTGCAAGTCTGAA...TCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACAAAGTGGAGAGCCTGTaGTTGCTCCCTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYKVESL*LLPESR
Trigger: CCTGGACTCAGGGAGCAACCACAGGCTCTCCACTTT...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAACTAAAGTTTCAAAGTaGAGAGCCTGTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKTKVSK*RACGCS
Trigger: GGAGCAACCACAGGCTCTCCACTTTGAAACTTTAGT...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAGCACGATGCAATTATTaGGTAGGTCACTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKARCNY*VGHCQA
Trigger: TGCTTGACAGTGACCTACCCAATAATTGCATCGTGC...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGATGAAGTTAAAGAGCTaGGTCTGGAGCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKMKLKS*VWSRCA
Trigger: TGCACATCTGCTCCAGACCCAGCTCTTTAACTTCAT...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAATCCATTTCCTATGAATaGAGATATAGGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKSISYE*RYRQQP
Trigger: AGGCTGCTGCCTATATCTTCATTCATAGGAAATGGA...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp GAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTGGTTCGTGAATATCACAGAGGATACGCCACAGTaGTATCATGGACAGCATCAA +
Preference number: 4 (lower is better)
Translates to: EISPFWEYEELKWFVNITEDTPQ*YHGQHQ
Trigger: TTGATGCTGTCCATGATATCACTGTGGCGTATCCTC...TGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCGAGGAGGTGCTTCTCTaGTTGAGGAATGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCEEVLL*LRNVVR
Trigger: CCTCACAACATTCCTCAATCAGAGAAGCACCTCCTC...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGAGGAGGTGCTTCTCTaGTTGAGGAATGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHEEVLL*LRNVVR
Trigger: CCTCACAACATTCCTCAATCAGAGAAGCACCTCCTC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp ATAAAAATTCTTCTCCCCTTGATAGAAGGAACGCAGCCTCTCTTCTTTCTCTTCGGCACATTGCAGGGCTaGACAGGGTCCAATACAGTA +
Preference number: 4 (lower is better)
Translates to: IKILLPLIEGTQPLFFLFGTLQG*TGSNTV
Trigger: TACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCC...GAAGAGAAAGAAGAGAGGCTGCGTTCCTTCTATCAAGGGGAGAAGAATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACTCCAGTAACAGCATGTaGTCCGGGCTGTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYSSNSM*SGLLLT
Trigger: CGTCAACAACAGCCCGGATCACATGCTGTTACTGGA...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACCCTGTGGTTGCTCCCTaGGTCCAGGTTTTATCTTCC +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYPVVAP*VQVLSS
Trigger: GGAAGATAAAACCTGGACTCAGGGAGCAACCACAGG...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTGCTGGATTTTCCACTaGCTCCAAATGACAAGAATA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFCWIFH*LQMTRI
Trigger: TATTCTTGTCATTTGGAGTCAGTGGAAAATCCAGCA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGACACCATGATTCTGTaGCAAGCAGGGCACGCCGCG +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEDTMIL*QAGHAA
Trigger: CGCGGCGTGCCCTGCTTGTCACAGAATCATGGTGTC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379509.8
CDS-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACCTTTCCATGACACCATaGTTCTGTGACAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHLSMTP*FCDKQG
Trigger: GCCCTGCTTGTCACAGAATCATGGTGTCATGGAAAG...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379509.8
CDS-3UTR GCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAACTGAGGCTGGTTCAATaGAGAAGTAAAACTAACAGG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKLRLVQ*RSKTNR
Trigger: CCTGTTAGTTTTACTTCTGCATTGAACCAGCCTCAG...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGCTGAGGCTGGTTCAATaGAGAAGTAAAACTAACAGG +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKLRLVQ*RSKTNR
Trigger: CCTGTTAGTTTTACTTCTGCATTGAACCAGCCTCAG...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAGAGTAGTGTTTACCTaGTACAGTGACCAGTGTTTA +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFRVVFT*YSDQCL
Trigger: TAAACACTGGTCACTGTAGCAGGTAAACACTACTCT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTCTTTTACACCAAACATaGTCTCCAATAATGCCACAG +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFLLHQT*SPIMPQ
Trigger: CTGTGGCATTATTGGAGACCATGTTTGGTGTAAAAG...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAGGTCTTCTGACGTCTTaGTCAGCATACAATGTTATG +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKGLLTS*SAYNVM
Trigger: CATAACATTGTATGCTGACCAAGACGTCAGAAGACC...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAATGCCACAGGTAGGGTaGGCCATGTTGCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEMPQVG*AMLPQG
Trigger: GCCTTGTGGCAACATGGCTCACCCTACCTGTGGCAT...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CCTAGGCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCAAATTTTCTCCAATCTaGGGTAGCTATATCGCATCA +
Preference number: 4 (lower is better)
Translates to: PRPTQGQDHQYHCLHLHIKFSPI*GSYIAS
Trigger: TGATGCGATATAGCTACCTCAGATTGGAGAAAATTT...GATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGCCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp ATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATACCTCCTGAATCCATTTCCTATGAATaGAGATATAGGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: MELSCPMTAMPSSGIPPESISYE*RYRQQP
Trigger: AGGCTGCTGCCTATATCTTCATTCATAGGAAATGGA...TTCAGGAGGTATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATATCCCTTCTGGGAATATaGGGAGTTGAAGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: ITSMELSCPMTAMPSSGISLLGI*GVEVVR
Trigger: ACGAACCACTTCAACTCCTCATATTCCCAGAAGGGA...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp GAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTGGTTCGTGAATATCACAGACTGTACAAATATATaGGTAGGCACATTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EISPFWEYEELKWFVNITDCTNI*VGTLQG
Trigger: GCCCTGCAATGTGCCTACTCATATATTTGTACAGTC...TGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCACCACTACCTCAGCATaGAGCTCATTTCTCCACGTT +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCTTTSA*SSFLHV
Trigger: AACGTGGAGAAATGAGCTTCATGCTGAGGTAGTGGT...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp GCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCCCAATTTCACGATATTaGTTCTTCCAATCCATGAGC +
Preference number: 4 (lower is better)
Translates to: AYTGSGSSISLSSPPHLVPISRY*FFQSMS
Trigger: GCTCATGGATTGGAAGAATCAATATCGTGAAATTGG...GACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR GCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGAAGCTTTTAGAGTCCTaGTTTATGAAGTACGTGCAG +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKKLLES*FMKYVQ
Trigger: CTGCACGTACTTCATAAAGCAGGACTCTAAAAGCTT...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309052.8
CDS-3UTR GCA 90 bp GCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCAAGCTTTTAGAGTCCTaGTTTATGAAGTACGTGCAG +
Preference number: 4 (lower is better)
Translates to: AYTGSGSSISLSSPPHLVKLLES*FMKYVQ
Trigger: CTGCACGTACTTCATAAAGCAGGACTCTAAAAGCTT...GACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR GCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTTCTCCAGGAACAAATaGATCCCCAGTTATAATCAC +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKFSRNK*IPSYNH
Trigger: GTGATTATAACTGGGGATGCATTTGTTCCTGGAGAA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp CCTTGGATGTGGGGAGGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCAAATATTCTCTCTTaGAGCACAAAGATTACAATG +
Preference number: 4 (lower is better)
Translates to: PWMWGGCLLDTGGRESGFPNILS*STKITM
Trigger: CATTGTAATCTTTGTGCTGCAAGAGAGAATATTTGG...AAATCCACTTTCACGTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR GCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTACCTTTCATGGCAATaGACGATGCAATTATTGGGT +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKYLSWQ*TMQLLG
Trigger: ACCCAATAATTGCATCGTGCATTGCCATGAAAGGTA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CCTAGGCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTCCATTCTTGTCCGATaGTTCATGATAATGACACTT +
Preference number: 4 (lower is better)
Translates to: PRPTQGQDHQYHCLHLHISILVR*FMIMTL
Trigger: AAGTGTCATTATCATGAACCATCGGACAAGAATGGA...GATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGCCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAAATCATGTCTTCGAAATaGCTCTTGTCATCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKIMSSK*LLSSFH
Trigger: ATGGAAGGATGACAAGAGCCATTTCGAAGACATGAT...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp GCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCATCATGTCTTCGAAATaGCTCTTGTCATCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: AYTGSGSSISLSSPPHLVIMSSK*LLSSFH
Trigger: ATGGAAGGATGACAAGAGCCATTTCGAAGACATGAT...GACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp ACCAAATCCAGGAACACCTTTGAGACTCGCTTTGAGGCAAATTTTCTCCAATCTGAAAGTGGATTTCCCTaGGAAAGTCTCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TKSRNTFETRFEANFLQSESGFP*ESLLGG
Trigger: TCCTCCAAGGAGACTTTCCCAGGGAAATCCACTTTC...AGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGATCAGAAACAGCTTTaGGGGAGCAGAGGAATATGG +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHDQKQL*GSRGIW
Trigger: CCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp ATCCTTCCATTTCCTATGAATGAAGATATAGGCAGCAGCCTGCATGGCCCAACCAAATTTTCTCCAATCTaGGGTAGCTATATCGCATCA +
Preference number: 4 (lower is better)
Translates to: ILPFPMNEDIGSSLHGPTKFSPI*GSYIAS
Trigger: TGATGCGATATAGCTACCTCAGATTGGAGAAAATTT...GGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp GAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTGGTTCGTGAATATCACATCCATTTCCTATGAATaGAGATATAGGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EISPFWEYEELKWFVNITSISYE*RYRQQP
Trigger: AGGCTGCTGCCTATATCTTCATTCATAGGAAATGGA...TGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACTCCCTTCTGGGAATATaGGGAGTTGAAGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYSLLGI*GVEVVR
Trigger: ACGAACCACTTCAACTCCTCATATTCCCAGAAGGGA...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCGACTGTACAAATATATaGGTAGGCACATTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCDCTNI*VGTLQG
Trigger: GCCCTGCAATGTGCCTACTCATATATTTGTACAGTC...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAATATACCATCAGACATTaGAAACTAAGGCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKYTIRH*KLRPFC
Trigger: ACAGAATGGCCTTAGTTTTCAATGTCTGATGGTATA...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTATACCATCAGACATTaGAAACTAAGGCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKYTIRH*KLRPFC
Trigger: ACAGAATGGCCTTAGTTTTCAATGTCTGATGGTATA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp ATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATACCTCCTGAATTCTCCAGGAACAAATaGATCCCCAGTTATAATCAC +
Preference number: 4 (lower is better)
Translates to: MELSCPMTAMPSSGIPPEFSRNK*IPSYNH
Trigger: GTGATTATAACTGGGGATGCATTTGTTCCTGGAGAA...TTCAGGAGGTATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR GCA 90 bp CAGGGTCCAATACAGTATAGAGAGCAATTTGACCACAAGGACCCTGAGTTCAGATTCTCCAGGAACAAATaGATCCCCAGTTATAATCAC +
Preference number: 4 (lower is better)
Translates to: QGPIQYREQFDHKDPEFRFSRNK*IPSYNH
Trigger: GTGATTATAACTGGGGATGCATTTGTTCCTGGAGAA...TCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR GCA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTCCAAATATTCTCTCTTaGAGCACAAAGATTACAATG +
Preference number: 4 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFPNILS*STKITM
Trigger: CATTGTAATCTTTGTGCTGCAAGAGAGAATATTTGG...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGGCTTCCTGTCAAAATaGTTGATCGGTTTCACGACA +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHGFLSK*LIGFTT
Trigger: TGTCGTGAAACCGATCAAGCATTTTGACAGGAAGCC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp CCTAGGCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTGCTTTGGTTGCAATTaGTTTTGTCATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PRPTQGQDHQYHCLHLHICFGCN*FCHLHH
Trigger: ATGATGAAGATGACAAAAGCAATTGCAACCAAAGCA...GATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATAGAGATCAGTCCCTTCTaGGAATATGAGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ITSMELSCPMTAMPSSGIEISPF*EYEELK
Trigger: CTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGAGGATGAGATGGGTTTaGCGCAGGAAGAAGGACGCC +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLRMRWV*RRKKDA
Trigger: GGCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCT...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACAAGAAGACTGGTGCTTaGTGTGCTGGATTTTCCACT +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHKKTGA*CAGFST
Trigger: AGTGGAAAATCCAGCACACCAAGCACCAGTCTTCTT...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCGCACGATGCAATTATTaGGTAGGTCACTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCARCNY*VGHCQA
Trigger: TGCTTGACAGTGACCTACCCAATAATTGCATCGTGC...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACATGAAGTTAAAGAGCTaGGTCTGGAGCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHMKLKS*VWSRCA
Trigger: TGCACATCTGCTCCAGACCCAGCTCTTTAACTTCAT...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AATCCAGGAACACCTTTGAGACTCGCTTTGAGGCAAATTTTCTCCAATCTGAGGGGATCTGAGCAGAGGTaGAAATCAGGAGATAATTCA +
Preference number: 4 (lower is better)
Translates to: NPGTPLRLALRQIFSNLRGSEQR*KSGDNS
Trigger: TGAATTATCTCCTGATTTCCACCTCTGCTCAGATCC...CCTCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
3UTR CAA 72 bp CAGGATCATCAATATCACTGTCTTCACCTCCACATCTaGTCTCACTGCAAGGTCTTCAGAGGTAATAACAAG +
Preference number: 4 (lower is better)
Translates to: QDHQYHCLHLHI*SHCKVFRGNNK
Trigger: CTTGTTATTACCTCTGAAGACCTTGCAGTGAGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGCCACAAGGCGGTTGTTaGTCCAGCGATACCAAGATG +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLPQGGC*SSDTKM
Trigger: CATCTTGGTATCGCTGGATCAACAACCGCCTTGTGG...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp GTGGTTCGTGAATATCACAAAAGTAATCAATCATGTCTTCGAAATGGCTCTTGTGAGGAGGTGCTTCTCTaGTTGAGGAATGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VVREYHKSNQSCLRNGSCEEVLL*LRNVVR
Trigger: CCTCACAACATTCCTCAATCAGAGAAGCACCTCCTC...ACAAGAGCCATTTCGAAGACATGATTGATTACTTTTGTGATATTCACGAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGCACAGGTGGTCTTCTaGCGTCTTGGTCAGCATACA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEAQVVF*RLGQHT
Trigger: TGTATGCTGACCAAGACGTCAGAAGACCACCTGTGC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AATCCAGGAACACCTTTGAGACTCGCTTTGAGGCAAATTTTCTCCAATCTGAGGAAGCTTTTAGAGTCCTaGTTTATGAAGTACGTGCAG +
Preference number: 4 (lower is better)
Translates to: NPGTPLRLALRQIFSNLRKLLES*FMKYVQ
Trigger: CTGCACGTACTTCATAAAGCAGGACTCTAAAAGCTT...CCTCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR GCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTGGAGAGCCTGTGGTTaGTCCCTGAGTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLWRACG*SLSPGF
Trigger: AAAACCTGGACTCAGGGAGCAACCACAGGCTCTCCA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp CCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTCAGCTGTGTTCTTTTTaGTTAAGATTGTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PTQGQDHQYHCLHLHILSQLCSF*LRLSWL
Trigger: TAGCCAAGACAATCTTAAGCAAAAAGAACACAGCTG...AGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR GCA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTCCAGTTTCAGTTTTCTaGATATGGCTAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPPVSVF*IWLASS
Trigger: AGAACTGGCTAGCCATATGCAGAAAACTGAAACTGG...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp CTGTACAAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTCTTTTACACCAAACATaGTCTCCAATAATGCCACAG +
Preference number: 4 (lower is better)
Translates to: LYKYMSRHIAGLNRVQYSLLHQT*SPIMPQ
Trigger: CTGTGGCATTATTGGAGACCATGTTTGGTGTAAAAG...ACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp GAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTGGTTCGTGAATATCACAATCATGTCTTCGAAATaGCTCTTGTCATCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: EISPFWEYEELKWFVNITIMSSK*LLSSFH
Trigger: ATGGAAGGATGACAAGAGCCATTTCGAAGACATGAT...TGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGTTGAAGGTCCTCCTTaGATGTGGGGAGGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEVEGPP*MWGGCL
Trigger: TAGACACCCTCCCCACATCCAAGGAGGACCTTCAAC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATTCCAGATCTGCCTCTaGTACGGGGAGTCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEFQICL*YGESVR
Trigger: CCTAACAGACTCCCCGTACCAGAGGCAGATCTGGAA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACCAGAGGAATATGGGTTaGTGTGTTTCAGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYQRNMG*CVSEEA
Trigger: TGCCTCTTCTGAAACACACCAACCCATATTCCTCTG...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 72 bp GTTCAGCCTCAACCAGTGCTTTCTCACAGAATCTGCTaGGTAAGTTCAGTTCACAATGTGTTTACCTTTCAT +
Preference number: 4 (lower is better)
Translates to: VQPQPVLSHRIC*VSSVHNVFTFH
Trigger: ATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCAGATTCTGTGAGAAAGCACTGGTTGAGGCTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATAGATTTCCTTGAGCAGTaGTTTGTAGTTCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: ITSMELSCPMTAMPSSGIDFLEQ*FVVLLE
Trigger: TTCAAGGAGAACTACAAATCACTGCTCAAGGAAATC...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR GCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACCATTACTGCCCTGTCTaGAAGCCATTTGTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHHYCPV*KPFVVL
Trigger: TAAAACAACAAATGGCTTGCAGACAGGGCAGTAATG...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACAGGATAAACCATTACTaGCCTGTCTGCAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYRINHY*PVCKPF
Trigger: AAATGGCTTGCAGACAGGGCAGTAATGGTTTATCCT...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCAGAGTAGTGTTTACCTaGTACAGTGACCAGTGTTTA +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCRVVFT*YSDQCL
Trigger: TAAACACTGGTCACTGTAGCAGGTAAACACTACTCT...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCCAATTTCCCTTCCCCTaGAATGCATATATCACATCA +
Preference number: 4 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSQFPFP*NAYITS
Trigger: TGATGTGATATATGCATTCCAGGGGAAGGGAAATTG...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATACTTTTACACCAAACATaGTCTCCAATAATGCCACAG +
Preference number: 4 (lower is better)
Translates to: ITSMELSCPMTAMPSSGILLHQT*SPIMPQ
Trigger: CTGTGGCATTATTGGAGACCATGTTTGGTGTAAAAG...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAAGAAAAGGGCACAGGTaGTCTTCTGACGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLERKGHR*SSDVLV
Trigger: GACCAAGACGTCAGAAGACCACCTGTGCCCTTTTCT...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATAAATTGCCATTTGGACTaGTGTGAGATGGTATCTCAT +
Preference number: 4 (lower is better)
Translates to: ITSMELSCPMTAMPSSGINCHLD*CEMVSH
Trigger: ATGAGATACCATCTCACACCAGTCCAAATGGCAATT...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACAAATTTTCTCCAATCTaGGGTAGCTATATCGCATCA +
Preference number: 4 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHKFSPI*GSYIAS
Trigger: TGATGCGATATAGCTACCTCAGATTGGAGAAAATTT...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATCCCTTCTGGGAATATaGGGAGTTGAAGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLESLLGI*GVEVVR
Trigger: ACGAACCACTTCAACTCCTCATATTCCCAGAAGGGA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAACTTGCTGTTTTCTGTaGGATCAGTCCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLETCCFL*DQSLLG
Trigger: TCCCAGAAGGGACTGATCTCACAGAAAACAGCAAGT...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAGGATACGCCACAGTaGTATCATGGACAGCATCAA +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLEDTPQ*YHGQHQ
Trigger: TTGATGCTGTCCATGATATCACTGTGGCGTATCCTC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACTGCTGGATTTTCCACTaGCTCCAAATGACAAGAATA +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYCWIFH*LQMTRI
Trigger: TATTCTTGTCATTTGGAGTCAGTGGAAAATCCAGCA...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGACCACTACCTCAGCATaGAGCTCATTTCTCCACGTT +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLTTTSA*SSFLHV
Trigger: AACGTGGAGAAATGAGCTTCATGCTGAGGTAGTGGT...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGACCCCGATCACTCCCTaGTATGTACACAGTATCGAA +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLTPITP*YVHSIE
Trigger: TTCGATACTGTGTACATAGCAGGGAGTGATCGGGGT...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp CATCAGCATCATCACAAACATGTGATGATGTCACCAGGTGATAGGAATTTTCTACACATCTTGTCTCACTaGAAGGTCTTCAGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HQHHHKHVMMSPGDRNFLHILSH*KVFRGN
Trigger: ATTACCTCTGAAGACCTTGCAGTGAGACAAGATGTG...TAGAAAATTCCTATCACCTGGTGACATCATCACATGTTTGTGATGATGCTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACCTTTTACACCAAACATaGTCTCCAATAATGCCACAG +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYLLHQT*SPIMPQ
Trigger: CTGTGGCATTATTGGAGACCATGTTTGGTGTAAAAG...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCTCCATTCTTGTCCGATaGTTCATGATAATGACACTT +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCSILVR*FMIMTL
Trigger: AAGTGTCATTATCATGAACCATCGGACAAGAATGGA...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATTCAGACTTGCAAGGTaGAATGACACTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEFRLAR*NDTLSG
Trigger: ACCGGACAGAGTGTCATTCCACCTTGCAAGTCTGAA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCTGTGTTTACCTTTCATaGCAATGCACGATGCAATTA +
Preference number: 4 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCCVYLS*QCTMQL
Trigger: TAATTGCATCGTGCATTGCCATGAAAGGTAAACACA...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGATCAGAAACAGCTTTaGGGGAGCAGAGGAATATGG +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEDQKQL*GSRGIW
Trigger: CCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTATTGTCTTGGCTATATaGGCTTTTTGTTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPIVLAI*AFCWFH
Trigger: ATGGAACCAACAAAAAGCCCATATAGCCAAGACAAT...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR GCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGGCTTCCTGTCAAAATaGTTGATCGGTTTCACGACA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEGFLSK*LIGFTT
Trigger: TGTCGTGAAACCGATCAAGCATTTTGACAGGAAGCC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAACATGGCAATGCACGATaGAATTATTGGGTAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEHGNAR*NYWVGH
Trigger: GTGACCTACCCAATAATTGCATCGTGCATTGCCATG...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTTATGAGGAGTTGAAGTaGTTCGTGAATATCACAAAA +
Preference number: 4 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPYEELK*FVNITK
Trigger: TTTTGTGATATTCACGAACCACTTCAACTCCTCATA...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAGATCAGTCCCTTCTaGGAATATGAGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLEISPF*EYEELK
Trigger: CTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
3UTR CAA 72 bp ATGCCTCCAGCTGTGTTCTTTTTGCTTAAGATTGTCTaGGCTATATGGGCTTTTTGTTGGTTCCATATGAAT +
Preference number: 4 (lower is better)
Translates to: MPPAVFFLLKIV*AIWAFCWFHMN
Trigger: ATTCATATGGAACCAACAAAAAGCCCATATAGCCAAGACAATCTTAAGCAAAAAGAACACAGCTGGAGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR CAA 72 bp CCTGTGCAGAAGCCCTTTAGTTTAATCAGATCCCATTaGTCAATTTTTGCTTTGGTTGCAATTGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: PVQKPFSLIRSH*SIFALVAIAFV
Trigger: GACAAAAGCAATTGCAACCAAAGCAAAAATTGACAAATGGGATCTGATTAAACTAAAGGGCTTCTGCACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
3UTR CAA 72 bp TTCTGTGAGATCAGTCCCTTCTGGGAATATGAGGAGTaGAAGTGGTTCGTGAATATCACAAAAGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: FCEISPFWEYEE*KWFVNITKVIN
Trigger: ATTGATTACTTTTGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGTAAATCCCTTTCCATaGCACCATGATTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLVNPFP*HHDSKA
Trigger: AGCTTTGGAATCATGGTGTCATGGAAAGGGATTTAC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309052.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATCCATTTCCTATGAATaGAGATATAGGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLESISYE*RYRQQP
Trigger: AGGCTGCTGCCTATATCTTCATTCATAGGAAATGGA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp CATCAGCATCATCACAAACATGTGATGATGTCACCAGGTGATAGGAATTTTCTATTGTCATCTTCATCATaGAATCTTTGCCCATGCTTA +
Preference number: 4 (lower is better)
Translates to: HQHHHKHVMMSPGDRNFLLSSSS*NLCPCL
Trigger: TAAGCATGGGCAAAGATTTCATGATGAAGATGACAA...TAGAAAATTCCTATCACCTGGTGACATCATCACATGTTTGTGATGATGCTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGTAAATCCCTTTCCATaGCACCATGATTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEVNPFP*HHDSVT
Trigger: TGTCACAGAATCATGGTGTCATGGAAAGGGATTTAC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379509.8
CDS-3UTR CCA 90 bp ACTTCTTTCTCCAGGAACAAATGCATCCCCAGTTATAATCACTTTTACACCAAACAATTTCCCTTCCCCTaGAATGCATATATCACATCA +
Preference number: 4 (lower is better)
Translates to: TSFSRNKCIPSYNHFYTKQFPFP*NAYITS
Trigger: TGATGTGATATATGCATTCCAGGGGAAGGGAAATTG...TTTGGTGTAAAAGTGATTATAACTGGGGATGCATTTGTTCCTGGAGAAAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACTATGAGGAGTTGAAGTaGTTCGTGAATATCACAAAA +
Preference number: 4 (lower is better)
Translates to: FNNILAQVISPRSLPAMYYEELK*FVNITK
Trigger: TTTTGTGATATTCACGAACCACTTCAACTCCTCATA...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp ATAAAAATTCTTCTCCCCTTGATAGAAGGAACGCAGCCTCTCTTCTTTCTCTTCTATGAGGAGTTGAAGTaGTTCGTGAATATCACAAAA +
Preference number: 4 (lower is better)
Translates to: IKILLPLIEGTQPLFFLFYEELK*FVNITK
Trigger: TTTTGTGATATTCACGAACCACTTCAACTCCTCATA...GAAGAGAAAGAAGAGAGGCTGCGTTCCTTCTATCAAGGGGAGAAGAATTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGGTCTTCTGACGTCTTaGTCAGCATACAATGTTATG +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLGLLTS*SAYNVM
Trigger: CATAACATTGTATGCTGACCAAGACGTCAGAAGACC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp CATCAGCATCATCACAAACATGTGATGATGTCACCAGGTGATAGGAATTTTCTAATCTGTAAATTGCTTTaGGCAGTATGGCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: HQHHHKHVMMSPGDRNFLICKLL*AVWPIS
Trigger: TGAAATTGGCCATACTGCCCAAAGCAATTTACAGAT...TAGAAAATTCCTATCACCTGGTGACATCATCACATGTTTGTGATGATGCTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGGGCTATATCTAATCTaGAGCTTATCAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEGLYLI*SLSGSK
Trigger: TTTGCTACCTGATAAGCTTCAGATTAGATATAGCCC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGGGCTATATCTAATCTaGAGCTTATCAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLGLYLI*SLSGSK
Trigger: TTTGCTACCTGATAAGCTTCAGATTAGATATAGCCC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTTCTCCAGGAACAAATaGATCCCCAGTTATAATCAC +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLFSRNK*IPSYNH
Trigger: GTGATTATAACTGGGGATGCATTTGTTCCTGGAGAA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGCATTACTGCCCTGTCTaGAAGCCATTTGTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLHYCPV*KPFVVL
Trigger: TAAAACAACAAATGGCTTGCAGACAGGGCAGTAATG...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATACCTTTCATGGCAATaGACGATGCAATTATTGGGT +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEYLSWQ*TMQLLG
Trigger: ACCCAATAATTGCATCGTGCATTGCCATGAAAGGTA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAACAATTTCCCTTCCCCTaGAATGCATATATCACATCA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEQFPFP*NAYITS
Trigger: TGATGTGATATATGCATTCCAGGGGAAGGGAAATTG...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309052.8
CDS-3UTR CCA 90 bp GTGGTTCGTGAATATCACAAAAGTAATCAATCATGTCTTCGAAATGGCTCTTGTTCCATTCTTGTCCGATaGTTCATGATAATGACACTT +
Preference number: 4 (lower is better)
Translates to: VVREYHKSNQSCLRNGSCSILVR*FMIMTL
Trigger: AAGTGTCATTATCATGAACCATCGGACAAGAATGGA...ACAAGAGCCATTTCGAAGACATGATTGATTACTTTTGTGATATTCACGAACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGATCATGTCTTCGAAATaGCTCTTGTCATCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLIMSSK*LLSSFH
Trigger: ATGGAAGGATGACAAGAGCCATTTCGAAGACATGAT...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR TCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAAAATTTTCTCCAATCTaGGGTAGCTATATCGCATCA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEKFSPI*GSYIAS
Trigger: TGATGCGATATAGCTACCTCAGATTGGAGAAAATTT...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTCCATTCTTGTCCGATaGTTCATGATAATGACACTT +
Preference number: 4 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLSILVR*FMIMTL
Trigger: AAGTGTCATTATCATGAACCATCGGACAAGAATGGA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATGTGTTTACCTTTCATaGCAATGCACGATGCAATTA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLECVYLS*QCTMQL
Trigger: TAATTGCATCGTGCATTGCCATGAAAGGTAAACACA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR GCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAACCAAATATTCTCTCTTaGAGCACAAAGATTACAATG +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEPNILS*STKITM
Trigger: CATTGTAATCTTTGTGCTGCAAGAGAGAATATTTGG...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CCA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAATATGAGGAGTTGAAGTaGTTCGTGAATATCACAAAA +
Preference number: 4 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEYEELK*FVNITK
Trigger: TTTTGTGATATTCACGAACCACTTCAACTCCTCATA...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS CCA 90 bp AAGCAGGGCACGCCGCGCGACGCCGAGTGGGGTGCGTGGGCAAGCTaGGGCTCCGTAGGGGTCACAACCTCCGTGCGGAACCCGCCGTTA +
Preference number: 5 (lower is better)
Translates to: KQGTPRDAEWGAWAS*GSVGVTTSVRNPPL
Trigger: TAACGGCGGGTTCCGCACGGAGGTTGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000309052.8
ENST00000319406.8
ENST00000379509.8
ENST00000465200.5
ENST00000465538.5
ENST00000466477.5
ENST00000476038.5
ENST00000478015.5
ENST00000488144.5
ENST00000491680.6
CDS CCA 90 bp CAGCCTCCCACCTGTGACAAGCAGGGCACGCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGGGGCTCCGTAGGGGTCACAACCTCC +
Preference number: 5 (lower is better)
Translates to: QPPTCDKQGTPRDAE*GAWASWGSVGVTTS
Trigger: GGAGGTTGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGGTGGGAGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309052.8
ENST00000465200.5
ENST00000491680.6
CDS CCA 90 bp GATGGTCCTATCTGTGACAAGCAGGGCACGCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGGGGCTCCGTAGGGGTCACAACCTCC +
Preference number: 5 (lower is better)
Translates to: DGPICDKQGTPRDAE*GAWASWGSVGVTTS
Trigger: GGAGGTTGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGATAGGACCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465538.5
CDS CCA 90 bp CAGAACTACATCTGTGACAAGCAGGGCACGCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGGGGCTCCGTAGGGGTCACAACCTCC +
Preference number: 5 (lower is better)
Translates to: QNYICDKQGTPRDAE*GAWASWGSVGVTTS
Trigger: GGAGGTTGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGATGTAGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS-3UTR CAA 90 bp GGGTGTCTATTGGATACCGGTGGACGTGAAAGTGGATTTCCCTGGGAAAGTCTCTGGGGAGGGTGTCTATaGGATACCGGTGGACGTGAA +
Preference number: 5 (lower is better)
Translates to: GCLLDTGGRESGFPWESLWGGCL*DTGGRE
Trigger: TTCACGTCCACCGGTATCCAATAGACACCCTCCCCA...GAGACTTTCCCAGGGAAATCCACTTTCACGTCCACCGGTATCCAATAGACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS GCA 90 bp CCCTGCAAGCACAGTTATAGGGCCTGCGTTCCTGTAAGAATCGAATaGAGTGGCGGATCTGAGCAGAGGTGGAAATCAGGAGATAATTCA +
Preference number: 5 (lower is better)
Translates to: PCKHSYRACVPVRIE*SGGSEQRWKSGDNS
Trigger: TGAATTATCTCCTGATTTCCACCTCTGCTCAGATCCGCCACTGCATTCGATTCTTACAGGAACGCAGGCCCTATAACTGTGCTTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGGCCACAAGGCGGTTGTaGATCCAGCGATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKATRRL*IQRYQD
Trigger: ATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGC...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAATCCAGGAACACCTTaGAGACTCGCTTTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFNPGTP*RLALRQ
Trigger: TTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTTTGTGGCACCAGAGTaGAAGGTCCTCCTTGGATGT +
Preference number: 5 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKFVAPE*KVLLGC
Trigger: ACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTGCACGATGCAATTATaGGGTAGGTCACTGTCAAGC +
Preference number: 5 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFCTMQL*GRSLSS
Trigger: GCTTGACAGTGACCTACCCAATAATTGCATCGTGCA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp GAGATCAGTCCCTTCTGGGAATATGAGGAGTTGAAGTGGTTCGTGAATATCACAGCCACAAGGCGGTTGTaGATCCAGCGATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: EISPFWEYEELKWFVNITATRRL*IQRYQD
Trigger: ATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGC...TGTGATATTCACGAACCACTTCAACTCCTCATATTCCCAGAAGGGACTGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp CTCCTTGGAGGAGGTGCTTCTCTGATTGAGGAATGTTGTGAGGATACGCCACAGTGGGAATATGAGGAGTaGAAGTGGTTCGTGAATATC +
Preference number: 5 (lower is better)
Translates to: LLGGGASLIEECCEDTPQWEYEE*KWFVNI
Trigger: GATATTCACGAACCACTTCAACTCCTCATATTCCCA...CTGTGGCGTATCCTCACAACATTCCTCAATCAGAGAAGCACCTCCTCCAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp CTCCTTGGAGGAGGTGCTTCTCTGATTGAGGAATGTTGTGAGGATACGCCACAGGCATTACTTCGAGACTaGCTGTTTTCTGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: LLGGGASLIEECCEDTPQALLRD*LFSVRS
Trigger: TGATCTCACAGAAAACAGCAAGTCTCGAAGTAATGC...CTGTGGCGTATCCTCACAACATTCCTCAATCAGAGAAGCACCTCCTCCAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACTGGGGAGGGTGTCTATaGGATACCGGTGGACGTGAA +
Preference number: 5 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHWGGCL*DTGGRE
Trigger: TTCACGTCCACCGGTATCCAATAGACACCCTCCCCA...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTAGTATAGAGAGCAATTaGACCACAAGGACCCTGAGT +
Preference number: 5 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFSIESN*TTRTLS
Trigger: ACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCAAGGATGAGATGGGTTaGGCGCAGGAAGAAGGACGC +
Preference number: 5 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCKDEMG*AQEEGR
Trigger: GCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCTT...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAATGCACGATGCAATTATaGGGTAGGTCACTGTCAAGC +
Preference number: 5 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKCTMQL*GRSLSS
Trigger: GCTTGACAGTGACCTACCCAATAATTGCATCGTGCA...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS TCA 90 bp CTGCTTTATGAAGTACGTGCAGTAGCTAGAAACTGCCTCGTTAATTaGCCATGGGTTCAGAAGCACCACAATTTCCCTTCCCCTGGAATG +
Preference number: 5 (lower is better)
Translates to: LLYEVRAVARNCLVN*PWVQKHHNFPSPGM
Trigger: CATTCCAGGGGAAGGGAAATTGTGGTGCTTCTGAACCCATGGTCAATTAACGAGGCAGTTTCTAGCTACTGCACGTACTTCATAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309052.8
ENST00000319406.8
ENST00000478015.5
ENST00000497423.1
CDS-3UTR CAA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCGCCACAAGGCGGTTGTaGATCCAGCGATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSATRRL*IQRYQD
Trigger: ATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGC...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTCTTCGAAATGGCTCTaGTCATCCTTCCATTTCCTA +
Preference number: 5 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFSSKWL*SSFHFL
Trigger: TAGGAAATGGAAGGATGACAAGAGCCATTTCGAAGA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CCTAGGCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTCTTCGAAATGGCTCTaGTCATCCTTCCATTTCCTA +
Preference number: 5 (lower is better)
Translates to: PRPTQGQDHQYHCLHLHISSKWL*SSFHFL
Trigger: TAGGAAATGGAAGGATGACAAGAGCCATTTCGAAGA...GATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTTGGGAATATGAGGAGTaGAAGTGGTTCGTGAATATC +
Preference number: 5 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFWEYEE*KWFVNI
Trigger: GATATTCACGAACCACTTCAACTCCTCATATTCCCA...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACTGGGGAGGGTGTCTATaGGATACCGGTGGACGTGAA +
Preference number: 5 (lower is better)
Translates to: FNNILAQVISPRSLPAMYWGGCL*DTGGRE
Trigger: TTCACGTCCACCGGTATCCAATAGACACCCTCCCCA...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CTGTACAAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTTTTGTGGCACCAGAGTaGAAGGTCCTCCTTGGATGT +
Preference number: 5 (lower is better)
Translates to: LYKYMSRHIAGLNRVQYSFVAPE*KVLLGC
Trigger: ACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAA...ACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGAAAATTCTTCTCCCCTaGATAGAAGGAACGCAGCCT +
Preference number: 5 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKKILLP*IEGTQP
Trigger: AGGCTGCGTTCCTTCTATCAAGGGGAGAAGAATTTT...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTTCTCGCTCCACAGCCTaGCCAGCATCTGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPSRSTA*PASVVS
Trigger: TGAAACAACAGATGCTGGCAAGGCTGTGGAGCGAGA...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS GCA 90 bp ATTGACCATGGGTTCAGAAGCACCACAATTTCCCTTCCCCTGGAATaGATATATCACATCATCCATTTGTTGCCAGCTTCCCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: IDHGFRSTTISLPLE*IYHIIHLLPASQKR
Trigger: TCTCTTCTGGGAAGCTGGCAACAAATGGATGATGTGATATATGCATTCCAGGGGAAGGGAAATTGTGGTGCTTCTGAACCCATGGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309052.8
ENST00000319406.8
ENST00000478015.5
ENST00000497423.1
CDS-3UTR CAA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACGCCACAAGGCGGTTGTaGATCCAGCGATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: FNNILAQVISPRSLPAMYATRRL*IQRYQD
Trigger: ATCTTGGTATCGCTGGATCAACAACCGCCTTGTGGC...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGCCTTTGAGACTCGCTTaGAGGCAAATTTTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKPLRLA*RQIFSN
Trigger: ATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGG...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CAGGCAATTCCACAGGAACATCCAGTCCATTCTTGTCCGATGGTTCATGATAATAATCCAGGAACACCTTaGAGACTCGCTTTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: QAIPQEHPVHSCPMVHDNNPGTP*RLALRQ
Trigger: TTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT...ATTATCATGAACCATCGGACAAGAATGGACTGGATGTTCCTGTGGAATTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp GCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTGGGAATATGAGGAGTaGAAGTGGTTCGTGAATATC +
Preference number: 5 (lower is better)
Translates to: AYTGSGSSISLSSPPHLVWEYEE*KWFVNI
Trigger: GATATTCACGAACCACTTCAACTCCTCATATTCCCA...GACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp AGGGGGTTCCATTTTCTGATCTTAAGGATGAGATGGGTTTGGCGCAGGAAGAAGTGGGAATATGAGGAGTaGAAGTGGTTCGTGAATATC +
Preference number: 5 (lower is better)
Translates to: RGFHFLILRMRWVWRRKKWEYEE*KWFVNI
Trigger: GATATTCACGAACCACTTCAACTCCTCATATTCCCA...CTTCTTCCTGCGCCAAACCCATCTCATCCTTAAGATCAGAAAATGGAACCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CAGGGTCCAATACAGTATAGAGAGCAATTTGACCACAAGGACCCTGAGTTCAGAAAAATTCTTCTCCCCTaGATAGAAGGAACGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QGPIQYREQFDHKDPEFRKILLP*IEGTQP
Trigger: AGGCTGCGTTCCTTCTATCAAGGGGAGAAGAATTTT...TCTGAACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACTGTATTGGACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp CTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACACAGTATCGAAATGGTCTTCTGACGTCTaGGTCAGCATACAATGTTAT +
Preference number: 5 (lower is better)
Translates to: LAQVISPRSLPAMYTVSKWSSDV*VSIQCY
Trigger: ATAACATTGTATGCTGACCAAGACGTCAGAAGACCA...TTTCGATACTGTGTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp ATAACAAGCATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATACTTCACCTCCACATCTaGTCTCACTGCAAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: ITSMELSCPMTAMPSSGILHLHI*SHCKVF
Trigger: GAAGACCTTGCAGTGAGACAAGATGTGGAGGTGAAG...TATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCATGCTTGTTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS TCA 90 bp TCATGTCTTCGAAATGGCTCTTGTCATCCTTCCATTTCCTATGAATaGAGATATAGGCAGCAGCCTGCATGGCCCAACATTACAAACTGG +
Preference number: 5 (lower is better)
Translates to: SCLRNGSCHPSISYE*RYRQQPAWPNITNW
Trigger: CCAGTTTGTAATGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGATGACAAGAGCCATTTCGAAGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491680.6
CDS-3UTR CAA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTAATCCAGGAACACCTTaGAGACTCGCTTTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPNPGTP*RLALRQ
Trigger: TTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp ATGGAGCTGTCATGTCCTATGACAGCAATGCCTTCTTCTGGAATACCTCCTGAAGCATTACTTCGAGACTaGCTGTTTTCTGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: MELSCPMTAMPSSGIPPEALLRD*LFSVRS
Trigger: TGATCTCACAGAAAACAGCAAGTCTCGAAGTAATGC...TTCAGGAGGTATTCCAGAAGAAGGCATTGCTGTCATAGGACATGACAGCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACGAAGAAGACTGGTGCTaGGTGTGCTGGATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: FNNILAQVISPRSLPAMYEEDWC*VCWIFH
Trigger: GTGGAAAATCCAGCACACCAAGCACCAGTCTTCTTC...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CAGCAGGATCAGAAACAGCTTTGGGGGAGCAGAGGAATATGGGTTGGTGTGTTTATATACCATCAGACATaGAAAACTAAGGCCATTCTG +
Preference number: 5 (lower is better)
Translates to: QQDQKQLWGSRGIWVGVFIYHQT*KTKAIL
Trigger: CAGAATGGCCTTAGTTTTCAATGTCTGATGGTATAT...AAACACACCAACCCATATTCCTCTGCTCCCCCAAAGCTGTTTCTGATCCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS CCA 90 bp CATGATTATCTTGAGAACTGTATTCTCCAAGCCCACTCACTTGTATaGTACAATGGTGGAGAGGGGAATGCTGCTATCAGAACTACATCT +
Preference number: 5 (lower is better)
Translates to: HDYLENCILQAHSLV*YNGGEGNAAIRTTS
Trigger: AGATGTAGTTCTGATAGCAGCATTCCCCTCTCCACCATTGTACCATACAAGTGAGTGGGCTTGGAGAATACAGTTCTCAAGATAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS-3UTR CAA 90 bp AATCCAGGAACACCTTTGAGACTCGCTTTGAGGCAAATTTTCTCCAATCTGAGGCCTTTGAGACTCGCTTaGAGGCAAATTTTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: NPGTPLRLALRQIFSNLRPLRLA*RQIFSN
Trigger: ATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGG...CCTCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACAATCCAGGAACACCTTaGAGACTCGCTTTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: FNNILAQVISPRSLPAMYNPGTP*RLALRQ
Trigger: TTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATT...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AAATATATGAGTAGGCACATTGCAGGGCTGAACAGGGTCCAATACAGTATAGAGAGTATAGAGAGCAATTaGACCACAAGGACCCTGAGT +
Preference number: 5 (lower is better)
Translates to: KYMSRHIAGLNRVQYSIESIESN*TTRTLS
Trigger: ACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACT...CTCTATACTGTATTGGACCCTGTTCAGCCCTGCAATGTGCCTACTCATATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGAAGGATGAGATGGGTTaGGCGCAGGAAGAAGGACGC +
Preference number: 5 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLKDEMG*AQEEGR
Trigger: GCGTCCTTCTTCCTGCGCCAAACCCATCTCATCCTT...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTGCCAATTTCACGATATaGATTCTTCCAATCCATGAG +
Preference number: 5 (lower is better)
Translates to: PTQGQDHQYHCLHLHILSANFTI*ILPIHE
Trigger: CTCATGGATTGGAAGAATCAATATCGTGAAATTGGC...AGACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp GCCTACACAGGGTCAGGATCATCAATATCACTGTCTTCACCTCCACATCTTGTCTTGCTTTGGTTGCAATaGCTTTTGTCATCTTCATCA +
Preference number: 5 (lower is better)
Translates to: AYTGSGSSISLSSPPHLVLLWLQ*LLSSSS
Trigger: TGATGAAGATGACAAAAGCAATTGCAACCAAAGCAA...GACAAGATGTGGAGGTGAAGACAGTGATATTGATGATCCTGACCCTGTGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGTTGCCACAAGGCGGTaGTTGATCCAGCGATACCAA +
Preference number: 5 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLVATRR*LIQRYQ
Trigger: TTGGTATCGCTGGATCAACAACCGCCTTGTGGCAAC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCCCTTTGAGACTCGCTTaGAGGCAAATTTTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCPLRLA*RQIFSN
Trigger: ATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGG...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCCCTTTGAGACTCGCTTaGAGGCAAATTTTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSPLRLA*RQIFSN
Trigger: ATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGG...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp TGCTTGGTAAGTTCAGTTCACAATGTGTTTACCTTTCATGGCAATGCACGATGCTCTTCGAAATGGCTCTaGTCATCCTTCCATTTCCTA +
Preference number: 5 (lower is better)
Translates to: CLVSSVHNVFTFHGNARCSSKWL*SSFHFL
Trigger: TAGGAAATGGAAGGATGACAAGAGCCATTTCGAAGA...GCATCGTGCATTGCCATGAAAGGTAAACACATTGTGAACTGAACTTACCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp ACCAAATCCAGGAACACCTTTGAGACTCGCTTTGAGGCAAATTTTCTCCAATCTTCTTCGAAATGGCTCTaGTCATCCTTCCATTTCCTA +
Preference number: 5 (lower is better)
Translates to: TKSRNTFETRFEANFLQSSSKWL*SSFHFL
Trigger: TAGGAAATGGAAGGATGACAAGAGCCATTTCGAAGA...AGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGTGTTCCTGGATTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACGCATTACTTCGAGACTaGCTGTTTTCTGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHALLRD*LFSVRS
Trigger: TGATCTCACAGAAAACAGCAAGTCTCGAAGTAATGC...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp ACTTCTTTCTCCAGGAACAAATGCATCCCCAGTTATAATCACTTTTACACCAAAACCCTGAGTTCAGACTaGCAAGGTGGAATGACACTC +
Preference number: 5 (lower is better)
Translates to: TSFSRNKCIPSYNHFYTKTLSSD*QGGMTL
Trigger: GAGTGTCATTCCACCTTGCAAGTCTGAACTCAGGGT...TTTGGTGTAAAAGTGATTATAACTGGGGATGCATTTGTTCCTGGAGAAAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS-3UTR CAA 90 bp TTTAATAATATTCTGGCCCAAGTTATTTCACCCCGATCACTCCCTGCTATGTACAGTATAGAGAGCAATTaGACCACAAGGACCCTGAGT +
Preference number: 5 (lower is better)
Translates to: FNNILAQVISPRSLPAMYSIESN*TTRTLS
Trigger: ACTCAGGGTCCTTGTGGTCAAATTGCTCTCTATACT...GTACATAGCAGGGAGTGATCGGGGTGAAATAACTTGGGCCAGAATATTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACTGGTCTTCTGACGTCTaGGTCAGCATACAATGTTAT +
Preference number: 5 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHWSSDV*VSIQCY
Trigger: ATAACATTGTATGCTGACCAAGACGTCAGAAGACCA...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGTTTGTGGCACCAGAGTaGAAGGTCCTCCTTGGATGT +
Preference number: 5 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLFVAPE*KVLLGC
Trigger: ACATCCAAGGAGGACCTTCAACTCTGGTGCCACAAA...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAACCCTGAGTTCAGACTaGCAAGGTGGAATGACACTC +
Preference number: 5 (lower is better)
Translates to: SKKRLYLRNTLHTTESLETLSSD*QGGMTL
Trigger: GAGTGTCATTCCACCTTGCAAGTCTGAACTCAGGGT...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGAAGAAGAAGACTGGTGCTaGGTGTGCTGGATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: SKKRLYLRNTLHTTESLEEEDWC*VCWIFH
Trigger: GTGGAAAATCCAGCACACCAAGCACCAGTCTTCTTC...TTCCAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp AGATCAGATGGCTGTAGTTGCACGGACTTATTTCTGAGTTCTCTATTCTGTTCCGGAGTGTTTTTCCATTaGTTTGTGTCCTCTCTGATT +
Preference number: 5 (lower is better)
Translates to: RSDGCSCTDLFLSSLFCSGVFFH*FVSSLI
Trigger: AATCAGAGAGGACACAAACAAATGGAAAAACACTCC...GGAACAGAATAGAGAACTCAGAAATAAGTCCGTGCAACTACAGCCATCTGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTTTGTTTTTGTCAGGTTaGTCAAAGATCAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPLFLSG*SKIRWL
Trigger: CAGCCATCTGATCTTTGACAAACCTGACAAAAACAA...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS TCA 90 bp TTTGGGCAGTATGGCCAATTTCACGATATTGATTCTTCCAATCCATaGGCATGGAGTGTTTTTCCATTTGTTTGTGTCCTCTCTGATTTC +
Preference number: 5 (lower is better)
Translates to: FGQYGQFHDIDSSNP*AWSVFPFVCVLSDF
Trigger: GAAATCAGAGAGGACACAAACAAATGGAAAAACACTCCATGCTCATGGATTGGAAGAATCAATATCGTGAAATTGGCCATACTGCCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp CACAATGTGTTTACCTTTCATGGCAATGCACGATGCAATTATTGGGTAGGTCACATATACCATCAGACATaGAAAACTAAGGCCATTCTG +
Preference number: 5 (lower is better)
Translates to: HNVFTFHGNARCNYWVGHIYHQT*KTKAIL
Trigger: CAGAATGGCCTTAGTTTTCAATGTCTGATGGTATAT...GTGACCTACCCAATAATTGCATCGTGCATTGCCATGAAAGGTAAACACATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS-3UTR CAA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTTCTTTTTGCTTAAGATaGTCTTGGCTATATGGGCTT +
Preference number: 5 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPSFCLR*SWLYGL
Trigger: AAGCCCATATAGCCAAGACAATCTTAAGCAAAAAGA...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp ACTAATATACATTCCCACCAACAATGTAAAAGCATTCCTCTCGCTCCACAGCCTCCCATTTGTCAATTTTaGCTTTGGTTGCAATTGCTT +
Preference number: 5 (lower is better)
Translates to: TNIHSHQQCKSIPLAPQPPICQF*LWLQLL
Trigger: AAGCAATTGCAACCAAAGCAAAAATTGACAAATGGG...AGGCTGTGGAGCGAGAGGAATGCTTTTACATTGTTGGTGGGAATGTATATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp CATCAGCATCATCACAAACATGTGATGATGTCACCAGGTGATAGGAATTTTCTAGAACGTCATTATGTGTaGCATGACTGTATATCCCAA +
Preference number: 5 (lower is better)
Translates to: HQHHHKHVMMSPGDRNFLERHYV*HDCISQ
Trigger: TTGGGATATACAGTCATGCAACACATAATGACGTTC...TAGAAAATTCCTATCACCTGGTGACATCATCACATGTTTGTGATGATGCTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS GCA 90 bp GAATGTCAACGGCAGTTTAATGGGAATAGCATTGAATCTGTAAATTaGTTTGGGCAGTATGGCCAATTTCACGATATTGATTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: ECQRQFNGNSIESVN*FGQYGQFHDIDSSN
Trigger: ATTGGAAGAATCAATATCGTGAAATTGGCCATACTGCCCAAAGCAATTTACAGATTCAATGCTATTCCCATTAAACTGCCGTTGACATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS-3UTR CAA 90 bp AGTAGCAAAAAGAGACTTTACCTAAGAAACACACTACATACTACAGAATCCTTGGCATTACTTCGAGACTaGCTGTTTTCTGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: SSKKRLYLRNTLHTTESLALLRD*LFSVRS
Trigger: TGATCTCACAGAAAACAGCAAGTCTCGAAGTAATGC...CAAGGATTCTGTAGTATGTAGTGTGTTTCTTAGGTAAAGTCTCTTTTTGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309052.8
ENST00000379509.8
CDS CCA 72 bp GCCTGTGACAAGCAGGGCACGCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGGGGCTCCGTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: ACDKQGTPRDAE*GAWASWGSVGV
Trigger: GACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319406.8
ENST00000478015.5
CDS CCA 72 bp ACGCCGCGCGACGCCGAGTGGGGTGCGTGGGCAAGCTaGGGCTCCGTAGGGGTCACAACCTCCGTGCGGAAC +
Preference number: 6 (lower is better)
Translates to: TPRDAEWGAWAS*GSVGVTTSVRN
Trigger: GTTCCGCACGGAGGTTGTGACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000309052.8
ENST00000319406.8
ENST00000379509.8
ENST00000465200.5
ENST00000465538.5
ENST00000466477.5
ENST00000476038.5
ENST00000478015.5
ENST00000488144.5
ENST00000491680.6
CDS CCA 72 bp ACCTGTGACAAGCAGGGCACGCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGGGGCTCCGTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: TCDKQGTPRDAE*GAWASWGSVGV
Trigger: GACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309052.8
ENST00000465200.5
ENST00000491680.6
CDS CCA 72 bp TTCTGTGACAAGCAGGGCACGCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGGGGCTCCGTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: FCDKQGTPRDAE*GAWASWGSVGV
Trigger: GACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379509.8
ENST00000466477.5
ENST00000476038.5
CDS CCA 72 bp ATCTGTGACAAGCAGGGCACGCCGCGCGACGCCGAGTaGGGTGCGTGGGCAAGCTGGGGCTCCGTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: ICDKQGTPRDAE*GAWASWGSVGV
Trigger: GACCCCTACGGAGCCCCAGCTTGCCCACGCACCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465538.5
ENST00000488144.5
CDS TCA 72 bp GACACCATGATTCTGATAGTTCCAGCCTCCCACCTGTaGCAAGCAGGGCACGCCGCGCGACGCCGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: DTMILIVPASHL*QAGHAARRRVG
Trigger: CCCCACTCGGCGTCGCGCGGCGTGCCCTGCTTGTCACAGGTGGGAGGCTGGAACTATCAGAATCATGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465200.5
CDS GCA 72 bp CACAGTTATAGGGCCTGCGTTCCTGTAAGAATCGAATaGAGTGGCGGATCTGAGCAGAGGTGGAAATCAGGA +
Preference number: 6 (lower is better)
Translates to: HSYRACVPVRIE*SGGSEQRWKSG
Trigger: TCCTGATTTCCACCTCTGCTCAGATCCGCCACTGCATTCGATTCTTACAGGAACGCAGGCCCTATAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478015.5
CDS GCA 72 bp CTCACTTGTATGGTACAATGGTGGAGAGGGGAATGCTaGTATCAGAACTACATCTGTGACAAGCAGGGCACG +
Preference number: 6 (lower is better)
Translates to: LTCMVQWWRGEC*YQNYICDKQGT
Trigger: CGTGCCCTGCTTGTCACAGATGTAGTTCTGATAGCAGCATTCCCCTCTCCACCATTGTACCATACAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS CAA 72 bp TCCCTTCCCCTGGAATGCATATATCACATCATCCATTaGTTGCCAGCTTCCCAGAAGAGAGTACCCACTCTG +
Preference number: 6 (lower is better)
Translates to: SLPLECIYHIIH*LPASQKRVPTL
Trigger: CAGAGTGGGTACTCTCTTCTGGGAAGCTGGCAACAAATGGATGATGTGATATATGCATTCCAGGGGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309052.8
ENST00000319406.8
ENST00000478015.5
ENST00000497423.1
CDS CCA 72 bp CTGTATTCTCCAAGCCCACTCACTTGTATGGTACAATaGTGGAGAGGGGAATGCTGCTATCAGAACTACATC +
Preference number: 6 (lower is better)
Translates to: LYSPSPLTCMVQ*WRGECCYQNYI
Trigger: GATGTAGTTCTGATAGCAGCATTCCCCTCTCCACCATTGTACCATACAAGTGAGTGGGCTTGGAGAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS CCA 72 bp CTTGAGAACTGTATTCTCCAAGCCCACTCACTTGTATaGTACAATGGTGGAGAGGGGAATGCTGCTATCAGA +
Preference number: 6 (lower is better)
Translates to: LENCILQAHSLV*YNGGEGNAAIR
Trigger: TCTGATAGCAGCATTCCCCTCTCCACCATTGTACCATACAAGTGAGTGGGCTTGGAGAATACAGTTCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS CAA 90 bp ACCACAATTTCCCTTCCCCTGGAATGCATATATCACATCATCCATTaGTTGCCAGCTTCCCAGAAGAGAGTACCCACTCTGTTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: TTISLPLECIYHIIH*LPASQKRVPTLFFS
Trigger: GCTGAAAAACAGAGTGGGTACTCTCTTCTGGGAAGCTGGCAACAAATGGATGATGTGATATATGCATTCCAGGGGAAGGGAAATTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309052.8
ENST00000319406.8
ENST00000478015.5
ENST00000497423.1
CDS TCA 72 bp CGAAATGGCTCTTGTCATCCTTCCATTTCCTATGAATaGAGATATAGGCAGCAGCCTGCATGGCCCAACATT +
Preference number: 6 (lower is better)
Translates to: RNGSCHPSISYE*RYRQQPAWPNI
Trigger: AATGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTCATAGGAAATGGAAGGATGACAAGAGCCATTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491680.6
CDS CCA 72 bp TATTCTCCAAGCCCACTCACTTGTATGGTACAATGGTaGAGAGGGGAATGCTGCTATCAGAACTACATCTGT +
Preference number: 6 (lower is better)
Translates to: YSPSPLTCMVQW*RGECCYQNYIC
Trigger: ACAGATGTAGTTCTGATAGCAGCATTCCCCTCTCCACCATTGTACCATACAAGTGAGTGGGCTTGGAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS CAA 90 bp GACACCATGATTATCTTGAGAACTGTATTCTCCAAGCCCACTCACTaGTATGGTACAATGGTGGAGAGGGGAATGCTGCTATCAGAACTA +
Preference number: 6 (lower is better)
Translates to: DTMIILRTVFSKPTH*YGTMVERGMLLSEL
Trigger: TAGTTCTGATAGCAGCATTCCCCTCTCCACCATTGTACCATACAAGTGAGTGGGCTTGGAGAATACAGTTCTCAAGATAATCATGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS CAA 72 bp ATTATCTTGAGAACTGTATTCTCCAAGCCCACTCACTaGTATGGTACAATGGTGGAGAGGGGAATGCTGCTA +
Preference number: 6 (lower is better)
Translates to: IILRTVFSKPTH*YGTMVERGMLL
Trigger: TAGCAGCATTCCCCTCTCCACCATTGTACCATACAAGTGAGTGGGCTTGGAGAATACAGTTCTCAAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488144.5
CDS TCA 72 bp AAATTGCTTTGGGCAGTATGGCCAATTTCACGATATTaGTTCTTCCAATCCATGAGCATGGAGTGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: KLLWAVWPISRY*FFQSMSMECFS
Trigger: GGAAAAACACTCCATGCTCATGGATTGGAAGAATCAATATCGTGAAATTGGCCATACTGCCCAAAGCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8
CDS TCA 72 bp TATGGCCAATTTCACGATATTGATTCTTCCAATCCATaGGCATGGAGTGTTTTTCCATTTGTTTGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: YGQFHDIDSSNP*AWSVFPFVCVL
Trigger: GAGGACACAAACAAATGGAAAAACACTCCATGCTCATGGATTGGAAGAATCAATATCGTGAAATTGGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319406.8