Pregenerated sensors for LCE6A (Homo sapiens)
Ensembl gene IDs: ENSG00000235942Ensembl transcript IDs: ENST00000431011.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTaGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAACTCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: EVEGLAFQGGISTQR*GRERVTAPVPQLFW Trigger: CCAGAAGAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| 3UTR CAA 90 bp | TCTAGAGCTGGGGATCAGGAAGTGTTTCTCAGTCCAAATGAGAGGTaGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SRAGDQEVFLSPNER*RAWLSKGELVPKGG Trigger: CCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACTGAGAAACACTTCCTGATCCCCAGCTCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| 3UTR CCA 72 bp | GGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTaGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: GLAFQGGISTQR*GRERVTAPVPQ Trigger: TTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | AGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGGTCCAAATGAGAGGTTaGGGGCCTGGCTTTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: RLRAWLSKGELVPKGGAGVQMRG*GPGFPR Trigger: CCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGAC...CCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | AGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGGCTGAGCTGAAGGGGTaGATGGAAGAGAGCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RLRAWLSKGELVPKGGAGAELKG*MEESSS Trigger: GCTACTGCTCTCTTCCATTCACCCCTTCAGCTCAGC...CCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | GGTGAATGGAAGAGAGCAGTAGCAGCGTGGCTCAGCCTAGTTCTCGCTTCTCTAAGGCAGCGCAGCTTTTaGCGAGCCCTCCTAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GEWKRAVAAWLSLVLASLRQRSF*RALLGF Trigger: GAAGCCTAGGAGGGCTCGTCAAAAGCTGCGCTGCCT...TAGAGAAGCGAGAACTAGGCTGAGCCACGCTGCTACTGCTCTCTTCCATTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | TTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGAGTGCCTCAACTCTTCTaGGCTCAGTCGCCTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: LRAWLSKGELVPKGGAGRVPQLF*AQSPSH Trigger: GTGTGAAGGCGACTGAGCCCAGAAGAGTTGAGGCAC...TCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR GCA 90 bp | AATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGTGCAGTGGTAGGTTGTaGCCCTACTTAGGCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: NERLRAWLSKGELVPKGGCSGRL*PYLGSA Trigger: TGCGCTGCCTAAGTAGGGGCACAACCTACCACTGCA...CCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | TTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTAGAGCAGTAGCAGCGTaGCTCAGCCTAGTTCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: FQGGISTQRWGRERVTAPRAVAA*LSLVLA Trigger: AGCGAGAACTAGGCTGAGCCACGCTGCTACTGCTCT...AGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | CTCAGTCCAAATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCTTGCTGCTTCTGCTGTaGCATTGCTTGGCTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPNERLRAWLSKGELVPLLLLL*HCLATR Trigger: CCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAA...GGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | TTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGGAATGACAACCTTCTaGATGGGGAGCACCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: FQGGISTQRWGRERVTAPGMTTF*MGSTTR Trigger: CCTTGTGGTGCTCCCCATTCAGAAGGTTGTCATTCC...AGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | TTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGACTTTGGGAACTGGAATaGCAACCTTCTGAATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LRAWLSKGELVPKGGAGRLWELE*QPSEWG Trigger: TCCCCATTCAGAAGGTTGTCATTCCAGTTCCCAAAG...TCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | AGTCCAAATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGCCCTCCTAGGCTTCTaGACCTCAGGCCTTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SPNERLRAWLSKGELVPKALLGF*TSGLWE Trigger: TTCCCAAAGGCCTGAGGTTCAGAAGCCTAGGAGGGC...TTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | ATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAACTCGTTTCTCAGTCCAAATaGGAGGTTGAGGGCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISTQRWGRERVTAPVPQLVSQSK*EVEGLA Trigger: AGCCAGGCCCTCAACCTCTCATTTGGACTGAGAAAC...GAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | AGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGTTATTGTTGCTGAGCTaGAGGGGTGAATGGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RLRAWLSKGELVPKGGAGLLLLS*RGEWKR Trigger: TCTCTTCCATTCACCCCTTCAGCTCAGCAACAATAA...CCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | ATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAACTCCTACCAGGTCGAATCTaGCTTTTCAGCTCCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ISTQRWGRERVTAPVPQLLPGRI*LFSSLG Trigger: TCCCAGGGAGCTGAAAAGCCAGATTCGACCTGGTAG...GAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGCAGGGGTTTGATCTTTaGGGAGGGGAGCATTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NERLRAWLSKGELVPKGGQGFDL*GGEHLG Trigger: TCCCAAATGCTCCCCTCCCCAAAGATCAAACCCCTG...CCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| 3UTR CAA 72 bp | GGGGATCAGGAAGTGTTTCTCAGTCCAAATGAGAGGTaGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCC | + |
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Preference number: 4 (lower is better) Translates to: GDQEVFLSPNER*RAWLSKGELVP Trigger: GGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACTGAGAAACACTTCCTGATCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | GGTGAATGGAAGAGAGCAGTAGCAGCGTGGCTCAGCCTAGTTCTCGCTTCTCTATGCCTAAGCAGCACTTaGGCTACATCCAAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GEWKRAVAAWLSLVLASLCLSST*ATSKCL Trigger: GAGACACTTGGATGTAGCTCAAGTGCTGCTTAGGCA...TAGAGAAGCGAGAACTAGGCTGAGCCACGCTGCTACTGCTCTCTTCCATTCACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR GCA 90 bp | CAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGTGGGCTTCCAAGATTGCTaGTTCTGCTGTGACATTGCT | + |
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Preference number: 4 (lower is better) Translates to: QGGISTQRWGRERVTAPVGFQDC*FCCDIA Trigger: AGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCC...CACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR GCA 90 bp | AATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGCAGGGAGAGAGTAACTaGACCTGTGCCTCAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: NERLRAWLSKGELVPKGGQGESN*TCASTL Trigger: AAGAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTG...CCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | GGTGAATGGAAGAGAGCAGTAGCAGCGTGGCTCAGCCTAGTTCTCGCTTCTCTATGCTGTGACATTGCTTaGCTACCAGGTCGAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: GEWKRAVAAWLSLVLASLCCDIA*LPGRIW Trigger: CCAGATTCGACCTGGTAGCCAAGCAATGTCACAGCA...TAGAGAAGCGAGAACTAGGCTGAGCCACGCTGCTACTGCTCTCTTCCATTCACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | TTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGAGCATTTGGGAACATTTaGAGGCTTCCAAGATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRAWLSKGELVPKGGAGRAFGNI*RLPRLL Trigger: CAGCAATCTTGGAAGCCTCCAAATGTTCCCAAATGC...TCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR TCA 90 bp | ATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAACTCCAGCTTTATTGTTGCTaGGCTGAAGGGGTGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: ISTQRWGRERVTAPVPQLQLYCC*AEGVNG Trigger: TCCATTCACCCCTTCAGCTCAGCAACAATAAAGCTG...GAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | ATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAACTCCTAGTGGAAGATGTGTaGACAAGTTATCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ISTQRWGRERVTAPVPQLLVEDV*TSYPRR Trigger: CCTCCTGGGATAACTTGTCCACACATCTTCCACTAG...GAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGATTAGTACCCAAAGGTaGGGCAGGGAGAGAGTAACT | + |
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Preference number: 4 (lower is better) Translates to: NERLRAWLSKGELVPKGGISTQR*GRERVT Trigger: AGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAAT...CCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CCA 90 bp | CTCAGTCCAAATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCCAGGCCTTTGGGAACTaGAATGACAACCTTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: LSPNERLRAWLSKGELVPQAFGN*NDNLLN Trigger: ATTCAGAAGGTTGTCATTCCAGTTCCCAAAGGCCTG...GGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR GCA 90 bp | AGTCCAAATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGAGGCTTCCAAGATTaGTGCTTCTGCTGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: SPNERLRAWLSKGELVPKGGFQD*CFCCDI Trigger: AATGTCACAGCAGAAGCAGCAATCTTGGAAGCCTCC...TTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CAA 90 bp | GAAGAGAGCAGTAGCAGCGTGGCTCAGCCTAGTTCTCGCTTCTCTAGAGCTGGGGCTTCTGCTGTGACATaGCTTGGCTACCAGGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: EESSSSVAQPSSRFSRAGASAVT*LGYQVE Trigger: TTCGACCTGGTAGCCAAGCAATGTCACAGCAGAAGC...CCCAGCTCTAGAGAAGCGAGAACTAGGCTGAGCCACGCTGCTACTGCTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CAA 90 bp | TTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGAAGTCCAAATGAGAGGTaGAGGGCCTGGCTTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LRAWLSKGELVPKGGAGRSPNER*RAWLSK Trigger: CTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACT...TCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS GCA 90 bp | TGCCTCAACTCTTCTGGGCTCAGTCGCCTTCACACTCTTCCTCTTTaGAGTGGTAGGTTGTGCCCCTACTTAGGCAGCGCAGCTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: CLNSSGLSRLHTLPL*SGRLCPYLGSAAFD Trigger: GTCAAAAGCTGCGCTGCCTAAGTAGGGGCACAACCTACCACTGCAAAGAGGAAGAGTGTGAAGGCGACTGAGCCCAGAAGAGTTGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CAA 90 bp | ATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAACTCTGGGGAGGGGAGCATTaGGGAACATTTGGAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISTQRWGRERVTAPVPQLWGGEH*GTFGGF Trigger: GAAGCCTCCAAATGTTCCCAAATGCTCCCCTCCCCA...GAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CAA 90 bp | TTCCAAGGGGGAATTAGTACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTCTTTGCAGTGGTAGGTaGTGCCCCTACTTAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FQGGISTQRWGRERVTAPLCSGR*CPYLGS Trigger: GCTGCCTAAGTAGGGGCACAACCTACCACTGCAAAG...AGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTACTAATTCCCCCTTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CAA 90 bp | AATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTAGTACCCAAAGGTGGGCTGAACCTCAGGCCTTaGGGAACTGGAATGACAACC | + |
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Preference number: 5 (lower is better) Translates to: NERLRAWLSKGELVPKGGLNLRP*GTGMTT Trigger: GGTTGTCATTCCAGTTCCCAAAGGCCTGAGGTTCAG...CCCACCTTTGGGTACTAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS GCA 90 bp | TGGGGAGGGGAGCATTTGGGAACATTTGGAGGCTTCCAAGATTGCTaGTTCTGCTGTGACATTGCTTGGCTACCAGGTCGAATCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: WGGEHLGTFGGFQDC*FCCDIAWLPGRIWL Trigger: AAGCCAGATTCGACCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCCTCCAAATGTTCCCAAATGCTCCCCTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS GCA 90 bp | CTTTGGGGAGGGGAGCATTTGGGAACATTTGGAGGCTTCCAAGATTaGTGCTTCTGCTGTGACATTGCTTGGCTACCAGGTCGAATCTGG | + |
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Preference number: 5 (lower is better) Translates to: LWGGEHLGTFGGFQD*CFCCDIAWLPGRIW Trigger: CCAGATTCGACCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCCTCCAAATGTTCCCAAATGCTCCCCTCCCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS GCA 90 bp | GGGGAGCATTTGGGAACATTTGGAGGCTTCCAAGATTGCTGCTTCTaGTGTGACATTGCTTGGCTACCAGGTCGAATCTGGCTTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GEHLGTFGGFQDCCF*CDIAWLPGRIWLFS Trigger: GCTGAAAAGCCAGATTCGACCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCCTCCAAATGTTCCCAAATGCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CAA 90 bp | TACCCAAAGGTGGGGCAGGGAGAGAGTAACTGCACCTGTGCCTCAACTCTTCTGAGCATTTGGGAACATTaGGAGGCTTCCAAGATTGCT | + |
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Preference number: 5 (lower is better) Translates to: YPKVGQGESNCTCASTLLSIWEH*EASKIA Trigger: AGCAATCTTGGAAGCCTCCAAATGTTCCCAAATGCT...CAGAAGAGTTGAGGCACAGGTGCAGTTACTCTCTCCCTGCCCCACCTTTGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS-3UTR CAA 90 bp | GTGTTTCTCAGTCCAAATGAGAGGTTGAGGGCCTGGCTTTCCAAGGGGGAATTACTGCCTAAGCAGCACTaGAGCTACATCCAAGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: VFLSPNERLRAWLSKGELLPKQH*SYIQVS Trigger: AGACACTTGGATGTAGCTCAAGTGCTGCTTAGGCAG...TAATTCCCCCTTGGAAAGCCAGGCCCTCAACCTCTCATTTGGACTGAGAAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS CAA 90 bp | CCTGGGAAGAGACGAGAGGAGAGATCAGGACTGCCTAAGCAGCACTaGAGCTACATCCAAGTGTCTCCTCAGCCAGAAGTAGCCTTACCC | + |
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Preference number: 6 (lower is better) Translates to: PGKRREERSGLPKQH*SYIQVSPQPEVALP Trigger: GGGTAAGGCTACTTCTGGCTGAGGAGACACTTGGATGTAGCTCAAGTGCTGCTTAGGCAGTCCTGATCTCTCCTCTCGTCTCTTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS CCA 72 bp | AGGGAGAGAGTAACTGCACCTGTGCCTCAACTCTTCTaGGCTCAGTCGCCTTCACACTCTTCCTCTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RERVTAPVPQLF*AQSPSHSSSLQ Trigger: CTGCAAAGAGGAAGAGTGTGAAGGCGACTGAGCCCAGAAGAGTTGAGGCACAGGTGCAGTTACTCTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS CAA 72 bp | AGTCGCCTTCACACTCTTCCTCTTTGCAGTGGTAGGTaGTGCCCCTACTTAGGCAGCGCAGCTTTTGACGAG | + |
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Preference number: 6 (lower is better) Translates to: SRLHTLPLCSGR*CPYLGSAAFDE Trigger: CTCGTCAAAAGCTGCGCTGCCTAAGTAGGGGCACAACCTACCACTGCAAAGAGGAAGAGTGTGAAGGCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS CCA 72 bp | GGCTTCCAAGATTGCTGCTTCTGCTGTGACATTGCTTaGCTACCAGGTCGAATCTGGCTTTTCAGCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GFQDCCFCCDIA*LPGRIWLFSSL Trigger: CAGGGAGCTGAAAAGCCAGATTCGACCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS CAA 90 bp | TGGGAACATTTGGAGGCTTCCAAGATTGCTGCTTCTGCTGTGACATaGCTTGGCTACCAGGTCGAATCTGGCTTTTCAGCTCCCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: WEHLEASKIAASAVT*LGYQVESGFSAPWE Trigger: TTCCCAGGGAGCTGAAAAGCCAGATTCGACCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCCTCCAAATGTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS GCA 72 bp | GGGGAGCATTTGGGAACATTTGGAGGCTTCCAAGATTaGTGCTTCTGCTGTGACATTGCTTGGCTACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GEHLGTFGGFQD*CFCCDIAWLPG Trigger: ACCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCCTCCAAATGTTCCCAAATGCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS CAA 72 bp | AGACGAGAGGAGAGATCAGGACTGCCTAAGCAGCACTaGAGCTACATCCAAGTGTCTCCTCAGCCAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: RREERSGLPKQH*SYIQVSPQPEV Trigger: TACTTCTGGCTGAGGAGACACTTGGATGTAGCTCAAGTGCTGCTTAGGCAGTCCTGATCTCTCCTCTCGTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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| CDS GCA 72 bp | GAGCATTTGGGAACATTTGGAGGCTTCCAAGATTGCTaGTTCTGCTGTGACATTGCTTGGCTACCAGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: EHLGTFGGFQDC*FCCDIAWLPGR Trigger: TCGACCTGGTAGCCAAGCAATGTCACAGCAGAAGCAGCAATCTTGGAAGCCTCCAAATGTTCCCAAATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431011.3 |
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