Pregenerated sensors for LCE1B (Homo sapiens)
Ensembl gene IDs: ENSG00000196734Ensembl transcript IDs: ENST00000360090.4
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTTTTGGGCCTCTGAACTCCAAGACAGAAGAATCCTCTATGCTTaGGTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: KFWASELQDRRILYA*VEPSPRPLNNMGRP Trigger: GGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGATTCTTCTGTCTTGGAGTTCAGAGGCCCAAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR CCA 90 bp | TCCTCTATGCTTGAGTTGAGCCCTCACCAAGACCTCTCAACAACATaGGCAGGCCCAGAAGGAGAAGGAAGACGGAAGGGAAATATTTGG | + |
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Preference number: 1 (lower is better) Translates to: SSMLELSPHQDLSTT*AGPEGEGRRKGNIW Trigger: CCAAATATTTCCCTTCCGTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR CAA 90 bp | TTTGGGCCTCTGAACTCCAAGACAGAAGAATCCTCTATGCTTGAGTaGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FGPLNSKTEESSMLE*SPHQDLSTTWAGPE Trigger: TTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGATTCTTCTGTCTTGGAGTTCAGAGGCCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR CAA 90 bp | TTCCCAGAGCAACCACACATACGCAAACTGAGGTCATTAAATGGCTaGGCTTTGGGGGAGAAGTTTTGGGCCTCTGAACTCCAAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: FPEQPHIRKLRSLNG*ALGEKFWASELQDR Trigger: TCTGTCTTGGAGTTCAGAGGCCCAAAACTTCTCCCCCAAAGCCAAGCCATTTAATGACCTCAGTTTGCGTATGTGTGGTTGCTCTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR CAA 90 bp | GAGCAACCACACATACGCAAACTGAGGTCATTAAATGGCTTGGCTTaGGGGGAGAAGTTTTGGGCCTCTGAACTCCAAGACAGAAGAATC | + |
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Preference number: 2 (lower is better) Translates to: EQPHIRKLRSLNGLA*GEKFWASELQDRRI Trigger: GATTCTTCTGTCTTGGAGTTCAGAGGCCCAAAACTTCTCCCCCAAAGCCAAGCCATTTAATGACCTCAGTTTGCGTATGTGTGGTTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTGGTTTTATTGTTTCACATCAGGCTGAGCTATGCAAAAAGACAAGCTGCTTGGGGGAGAAGTTTTaGGCCTCTGAACTCCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ISGFIVSHQAELCKKTSCLGEKF*ASELQD Trigger: GTCTTGGAGTTCAGAGGCCCAAAACTTCTCCCCCAA...GCAGCTTGTCTTTTTGCATAGCTCAGCCTGATGTGAAACAATAAAACCAGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR TCA 72 bp | GCCTCTGAACTCCAAGACAGAAGAATCCTCTATGCTTaGGTTGAGCCCTCACCAAGACCTCTCAACAACATG | + |
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Preference number: 3 (lower is better) Translates to: ASELQDRRILYA*VEPSPRPLNNM Trigger: CATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGATTCTTCTGTCTTGGAGTTCAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR GCA 72 bp | ATGCAAAAAGACAAGCTGCAAAGGGATATAGGTCTGTaGTTTGGGCTTCCCAGAGCAACCACACATACGCAA | + |
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Preference number: 3 (lower is better) Translates to: MQKDKLQRDIGL*FGLPRATTHTQ Trigger: TTGCGTATGTGTGGTTGCTCTGGGAAGCCCAAAGCACAGACCTATATCCCTTTGCAGCTTGTCTTTTTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR-3UTR CAA 90 bp | AAGACAGAAGAATCCTCTATGCTTGAGTTGAGCCCTCACCAAGACCTCTCAACAGAAATATTTGGCCATTaGTGTTCTTCTAGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: KTEESSMLELSPHQDLSTEIFGH*CSSRLR Trigger: CCTGAGCCTAGAAGAACACAAATGGCCAAATATTTC...TGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGATTCTTCTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR TCA 90 bp | CCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGACGCCTCTATGCTTGAGTTaGGCCCTCACCAAGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSPRPLNNMGRPRRRRKTPLCLS*ALTKTS Trigger: AGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGG...CGTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CCA 90 bp | GTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGGACCTCTCAACAACATaGGCAGGCCCAGAAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VEPSPRPLNNMGRPRRRRDLSTT*AGPEGE Trigger: TTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTC...CCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR GCA 90 bp | CCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGACGAGGGATATAGGTCTGTaGTTTGGGCTTCCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSPRPLNNMGRPRRRRKTRDIGL*FGLPRA Trigger: TGCTCTGGGAAGCCCAAAGCACAGACCTATATCCCT...CGTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CCA 90 bp | AGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGATATAGGTCTGTGCTTTaGGCTTCCCAGAGCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: SPHQDLSTTWAGPEGEGRYRSVL*ASQSNH Trigger: GTGGTTGCTCTGGGAAGCCCAAAGCACAGACCTATA...TCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CCA 90 bp | ATGCTTGAGTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAATTGGGGGAGAAGTTTTaGGCCTCTGAACTCCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: MLELSPHQDLSTTWAGPELGEKF*ASELQD Trigger: GTCTTGGAGTTCAGAGGCCCAAAACTTCTCCCCCAA...TTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR GCA 90 bp | CCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGACGGCATCAGGCTGAGCTATaGAAAAAGACAAGCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PHQDLSTTWAGPEGEGRRHQAEL*KKTSCK Trigger: TTTGCAGCTTGTCTTTTTGCATAGCTCAGCCTGATG...CCGTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR TCA 90 bp | CCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGACGTACACACCTGAATCATaGAAACAATCTAGAAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PSPRPLNNMGRPRRRRKTYTPES*KQSRKG Trigger: CCCCTTTCTAGATTGTTTTCATGATTCAGGTGTGTA...CGTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CCA 90 bp | ATGCTTGAGTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAACTGAGGTCATTAAATaGCTTGGCTTTGGGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: MLELSPHQDLSTTWAGPETEVIK*LGFGGE Trigger: TTCTCCCCCAAAGCCAAGCCATTTAATGACCTCAGT...TTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| 3UTR CAA 72 bp | CTGAACTCCAAGACAGAAGAATCCTCTATGCTTGAGTaGAGCCCTCACCAAGACCTCTCAACAACATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LNSKTEESSMLE*SPHQDLSTTWA Trigger: TGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGATTCTTCTGTCTTGGAGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CCA 90 bp | GCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGACATTGTGTCTAATAGTTaGCTAAACACACTTATAGCC | + |
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Preference number: 4 (lower is better) Translates to: ALTKTSQQHGQAQKEKEDIVSNS*LNTLIA Trigger: GGCTATAAGTGTGTTTAGCCAACTATTAGACACAAT...GTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR TCA 90 bp | CAGAAGGAGAAGGAAGACGGAAGGGAAATATTTGGCCATTTGTGTTCTTCTAGGAGAATCCTCTATGCTTaGGTTGAGCCCTCACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: QKEKEDGREIFGHLCSSRRILYA*VEPSPR Trigger: TCTTGGTGAGGGCTCAACTCAAGCATAGAGGATTCT...CCTAGAAGAACACAAATGGCCAAATATTTCCCTTCCGTCTTCCTTCTCCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTGGTTTTATTGTTTCACATCAGGCTGAGCTATGCAAAAAGACAAGCTGCGAAGTTTTGGGCCTCTaGACTCCAAGACAGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: ISGFIVSHQAELCKKTSCEVLGL*TPRQKN Trigger: ATTCTTCTGTCTTGGAGTTCAGAGGCCCAAAACTTC...GCAGCTTGTCTTTTTGCATAGCTCAGCCTGATGTGAAACAATAAAACCAGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR TCA 90 bp | ATTTCTGGTTTTATTGTTTCACATCAGGCTGAGCTATGCAAAAAGACAAGCTGCTGTTTCACATCAGGCTaGGCTATGCAAAAAGACAAG | + |
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Preference number: 4 (lower is better) Translates to: ISGFIVSHQAELCKKTSCCFTSG*AMQKDK Trigger: CTTGTCTTTTTGCATAGCTCAGCCTGATGTGAAACA...GCAGCTTGTCTTTTTGCATAGCTCAGCCTGATGTGAAACAATAAAACCAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CAA 90 bp | GTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGCACCCCGGCCTATTCTaGCCCTTTCAGCATCATTTC | + |
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Preference number: 5 (lower is better) Translates to: VEPSPRPLNNMGRPRRRRHPGLF*PFQHHF Trigger: GAAATGATGCTGAAAGGGCAAGAATAGGCCGGGGTG...CCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CAA 90 bp | GTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGTCCTCTATGCTTGAGTaGAGCCCTCACCAAGACCTC | + |
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Preference number: 5 (lower is better) Translates to: VEPSPRPLNNMGRPRRRRSSMLE*SPHQDL Trigger: GAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGA...CCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CAA 90 bp | GCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGACGAAATATTTGGCCATTaGTGTTCTTCTAGGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: ALTKTSQQHGQAQKEKEDEIFGH*CSSRLR Trigger: CCTGAGCCTAGAAGAACACAAATGGCCAAATATTTC...GTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CAA 90 bp | GTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGGGTTTGGAAATAAAATaGTTTCTCAAGGGGAAACAG | + |
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Preference number: 5 (lower is better) Translates to: VEPSPRPLNNMGRPRRRRGLEIK*FLKGKQ Trigger: CTGTTTCCCCTTGAGAAACAATTTTATTTCCAAACC...CCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CAA 90 bp | CCTCACCAAGACCTCTCAACAACATGGGCAGGCCCAGAAGGAGAAGGAAGACGGATATTTCTGGTTTTATaGTTTCACATCAGGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PHQDLSTTWAGPEGEGRRIFLVL*FHIRLS Trigger: GCTCAGCCTGATGTGAAACAATAAAACCAGAAATAT...CCGTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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| CDS-3UTR CAA 90 bp | GAATCCTCTATGCTTGAGTTGAGCCCTCACCAAGACCTCTCAACAACATGGGCAAGGTCATTAAATGGCTaGGCTTTGGGGGAGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: ESSMLELSPHQDLSTTWARSLNG*ALGEKF Trigger: AAACTTCTCCCCCAAAGCCAAGCCATTTAATGACCT...TGCCCATGTTGTTGAGAGGTCTTGGTGAGGGCTCAACTCAAGCATAGAGGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360090.4 |
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