Pregenerated sensors for LCE1A (Homo sapiens)

Ensembl gene IDs: ENSG00000186844

Ensembl transcript IDs: ENST00000335123.4

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CAA 90 bp	AGCCACTCTTGCAGGCCCAGGAGGAGACAGGTGAGGAGGAAATGTTaGATCACTCATTTCACCCGAGTCTGCTCTTCTAGGTGCAGAGTC	+
Preference number: 2 (lower is better) Translates to: SHSCRPRRRQVRRKC*ITHFTRVCSSRCRV Trigger: GACTCTGCACCTAGAAGAGCAGACTCGGGTGAAATGAGTGATCAAACATTTCCTCCTCACCTGTCTCCTCCTGGGCCTGCAAGAGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
3UTR-3UTR CCA 90 bp	AATGAGCTGGAGAGTGAGTTTGTGGCTTGGGATCCCAGAGTAGACAACACAGTTCAGCAGATAGGTTTGTaGGAGAAGAATCAAGTTTCT	+
Preference number: 2 (lower is better) Translates to: NELESEFVAWDPRVDNTVQQIGL*EKNQVS Trigger: AGAAACTTGATTCTTCTCCCACAAACCTATCTGCTG...AACTGTGTTGTCTACTCTGGGATCCCAAGCCACAAACTCACTCTCCAGCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
3UTR-3UTR CAA 90 bp	AATGAGCTGGAGAGTGAGTTTGTGGCTTGGGATCCCAGAGTAGACAACACAGTTGTGAGGAGGAAATGTTaGATCACTCATTTCACCCGA	+
Preference number: 3 (lower is better) Translates to: NELESEFVAWDPRVDNTVVRRKC*ITHFTR Trigger: TCGGGTGAAATGAGTGATCAAACATTTCCTCCTCAC...AACTGTGTTGTCTACTCTGGGATCCCAAGCCACAAACTCACTCTCCAGCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR GCA 90 bp	CCAGAGCTCAGAGCCTTCACGCGGGCATCTCAGCCACTCTTGCAGGCCCAGGAGCATTTCACCCGAGTCTaGTCTTCTAGGTGCAGAGTC	+
Preference number: 4 (lower is better) Translates to: PELRAFTRASQPLLQAQEHFTRV*SSRCRV Trigger: GACTCTGCACCTAGAAGAGCAGACTCGGGTGAAATG...CTCCTGGGCCTGCAAGAGTGGCTGAGATGCCCGCGTGAAGGCTCTGAGCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CCA 90 bp	GGGCAGAGGGATCCTCTAGGCCAGAGCTCAGAGCCTTCACGCGGGCATCTCAGCAGTAGACAACACAGTTaGTGTCAGGGGCAGCAGATA	+
Preference number: 4 (lower is better) Translates to: GQRDPLGQSSEPSRGHLSSRQHS*CQGQQI Trigger: TATCTGCTGCCCCTGACACCAACTGTGTTGTCTACT...GCTGAGATGCCCGCGTGAAGGCTCTGAGCTCTGGCCTAGAGGATCCCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CCA 90 bp	GGGCAGAGGGATCCTCTAGGCCAGAGCTCAGAGCCTTCACGCGGGCATCTCAGCCAGCAGATAGGTTTGTaGGAGAAGAATCAAGTTTCT	+
Preference number: 4 (lower is better) Translates to: GQRDPLGQSSEPSRGHLSQQIGL*EKNQVS Trigger: AGAAACTTGATTCTTCTCCCACAAACCTATCTGCTG...GCTGAGATGCCCGCGTGAAGGCTCTGAGCTCTGGCCTAGAGGATCCCTCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
3UTR CAA 72 bp	TGCAGGCCCAGGAGGAGACAGGTGAGGAGGAAATGTTaGATCACTCATTTCACCCGAGTCTGCTCTTCTAGG	+
Preference number: 4 (lower is better) Translates to: CRPRRRQVRRKC*ITHFTRVCSSR Trigger: CCTAGAAGAGCAGACTCGGGTGAAATGAGTGATCAAACATTTCCTCCTCACCTGTCTCCTCCTGGGCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CCA 90 bp	AAATGTTTGATCACTCATTTCACCCGAGTCTGCTCTTCTAGGTGCAGAGTCCGCCTGCAGGAAATGAGCTaGAGAGTGAGTTTGTGGCTT	+
Preference number: 4 (lower is better) Translates to: KCLITHFTRVCSSRCRVRLQEMS*RVSLWL Trigger: AAGCCACAAACTCACTCTCCAGCTCATTTCCTGCAG...GCGGACTCTGCACCTAGAAGAGCAGACTCGGGTGAAATGAGTGATCAAACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CAA 90 bp	CAGAGGGATCCTCTAGGCCAGAGCTCAGAGCCTTCACGCGGGCATCTCAGCCACTTAGGAGTGGGGCACTaGGGAGGGCACTTGGGGGTG	+
Preference number: 5 (lower is better) Translates to: QRDPLGQSSEPSRGHLSHLGVGH*GGHLGV Trigger: CACCCCCAAGTGCCCTCCCAAGTGCCCCACTCCTAA...GTGGCTGAGATGCCCGCGTGAAGGCTCTGAGCTCTGGCCTAGAGGATCCCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CAA 90 bp	GAGGAGACAGGTGAGGAGGAAATGTTTGATCACTCATTTCACCCGAGTCTGCTCGCATCTCAGCCACTCTaGCAGGCCCAGGAGGAGACA	+
Preference number: 5 (lower is better) Translates to: EETGEEEMFDHSFHPSLLASQPL*QAQEET Trigger: TGTCTCCTCCTGGGCCTGCAAGAGTGGCTGAGATGC...GAGCAGACTCGGGTGAAATGAGTGATCAAACATTTCCTCCTCACCTGTCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CAA 90 bp	CCAGAGCTCAGAGCCTTCACGCGGGCATCTCAGCCACTCTTGCAGGCCCAGGAGAGATCTTTTGCTTTATaGTTTCACTTGAGGCTGCAG	+
Preference number: 5 (lower is better) Translates to: PELRAFTRASQPLLQAQERSFAL*FHLRLQ Trigger: CTGCAGCCTCAAGTGAAACAATAAAGCAAAAGATCT...CTCCTGGGCCTGCAAGAGTGGCTGAGATGCCCGCGTGAAGGCTCTGAGCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CAA 90 bp	CAGCAGATAGGTTTGTGGGAGAAGAATCAAGTTTCTGGATCCCAGGGCAGAGGGAGCTGGAGAGTGAGTTaGTGGCTTGGGATCCCAGAG	+
Preference number: 5 (lower is better) Translates to: QQIGLWEKNQVSGSQGRGSWRVS*WLGIPE Trigger: CTCTGGGATCCCAAGCCACAAACTCACTCTCCAGCT...CCCTCTGCCCTGGGATCCAGAAACTTGATTCTTCTCCCACAAACCTATCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CAA 90 bp	AAATGTTTGATCACTCATTTCACCCGAGTCTGCTCTTCTAGGTGCAGAGTCCGCGTGAGGAGGAAATGTTaGATCACTCATTTCACCCGA	+
Preference number: 5 (lower is better) Translates to: KCLITHFTRVCSSRCRVRVRRKC*ITHFTR Trigger: TCGGGTGAAATGAGTGATCAAACATTTCCTCCTCAC...GCGGACTCTGCACCTAGAAGAGCAGACTCGGGTGAAATGAGTGATCAAACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4
CDS-3UTR CAA 90 bp	CAGGTGAGGAGGAAATGTTTGATCACTCATTTCACCCGAGTCTGCTCTTCTAGGGCTTTATTGTTTCACTaGAGGCTGCAGGAAATGAGC	+
Preference number: 5 (lower is better) Translates to: QVRRKCLITHFTRVCSSRALLFH*RLQEMS Trigger: GCTCATTTCCTGCAGCCTCAAGTGAAACAATAAAGC...CCTAGAAGAGCAGACTCGGGTGAAATGAGTGATCAAACATTTCCTCCTCACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335123.4