Pregenerated sensors for LCA5L (Homo sapiens)
Ensembl gene IDs: ENSG00000157578Ensembl transcript IDs: ENST00000288350.8, ENST00000358268.6, ENST00000380671.6, ENST00000411566.5, ENST00000415863.5, ENST00000418018.5, ENST00000426783.5, ENST00000434281.5, ENST00000438404.5, ENST00000448288.6, ENST00000459939.5, ENST00000466954.5, ENST00000468009.6, ENST00000480612.1, ENST00000484878.5, ENST00000485895.6, ENST00000491625.5, ENST00000495240.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCAGTCCAGCCACAGAGTaGACTCTTGTGCACTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTSPATE*TLVHCN Trigger: GTTGCAGTGCACAAGAGTTCACTCTGTGGCTGGACT...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| 3UTR-3UTR TCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCTCCTGGCCAAAATGGTaGGGGAGAATACAAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTSWPKW*GRIQRP Trigger: GGGCCTTTGTATTCTCCCTCACCATTTTGGCCAGGA...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| 3UTR-3UTR GCA 90 bp | GAGAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCAACCACTCCCTTTCTGTaGCCTCTATTAGACAACATA | + |
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Preference number: 2 (lower is better) Translates to: ENGHFQINQSSHRVNSCATTPFL*PLLDNI Trigger: TATGTTGTCTAATAGAGGGCACAGAAAGGGAGTGGT...TGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATGAGGGGGCGCATCCATaGTTAATTCACACCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GPIISLWYTRVKIEVAHYEGAHP*LIHTLS Trigger: AGAGAGGGTGTGAATTAATCATGGATGCGCCCCCTC...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| 3UTR GCA 72 bp | AGGGTTGACTTCAAAGAGAGGTTTCACGTAACACAATaGAATCTTTTCAGCACAGGGAAAAAGTCCCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: RVDFKERFHVTQ*NLFSTGKKSLS Trigger: GCTAAGGGACTTTTTCCCTGTGCTGAAAAGATTGCATTGTGTTACGTGAAACCTCTCTTTGAAGTCAACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| 3UTR-3UTR CAA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATCCACAGAGTGAACTCTaGTGCACTGCAACAGATGAA | + |
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Preference number: 3 (lower is better) Translates to: GPIISLWYTRVKIEVAHYPQSEL*CTATDE Trigger: TTCATCTGTTGCAGTGCACAAGAGTTCACTCTGTGG...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCACTAGTCCAGCCACAGAGTaGACTCTTGTGCACTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: EWSFPDKPVQPQSELLCTSPATE*TLVHCN Trigger: GTTGCAGTGCACAAGAGTTCACTCTGTGGCTGGACT...AGTGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GAGAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCATCCTGGCCAAAATGGTaGGGGAGAATACAAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ENGHFQINQSSHRVNSCASWPKW*GRIQRP Trigger: GGGCCTTTGTATTCTCCCTCACCATTTTGGCCAGGA...TGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CCA 90 bp | GAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCACTAAAATCGCCTGTGCCTaGGCTTCTCTTGCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EWSFPDKPVQPQSELLCTKIACA*ASLACC Trigger: GCAGCATGCAAGAGAAGCCCAGGCACAGGCGATTTT...AGTGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | ACGCCAAGTGAAGCAGTTAGTAATGCTTTGTTACAGAGGGGGCGCATCCATGATGCTTCTCTTGCATGCTaGAGACCTCCTATTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TPSEAVSNALLQRGRIHDASLAC*RPPIVF Trigger: GAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGC...ATCATGGATGCGCCCCCTCTGTAACAAAGCATTACTAACTGCTTCACTTGGCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCGTGAAAAATCGCCTGTaGCTGGGCTTCTCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTVKNRL*LGFSCM Trigger: CATGCAAGAGAAGCCCAGGCACAGGCGATTTTTCAC...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCACTGCTGAGAGTATTCGATaGGCCATAGCATCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: EWSFPDKPVQPQSELLCTAESIR*AIASLL Trigger: AAGAAGAGATGCTATGGCTCATCGAATACTCTCAGC...AGTGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GAGAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCAAACTGTCTGGGCCCCTaGAATACAGACCTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: ENGHFQINQSSHRVNSCANCLGP*NTDLYF Trigger: AAAATACAGGTCTGTATTTCAGGGGCCCAGACAGTT...TGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | ACTACAAATGTCTGTGTGGTAATTCCTGGCCAAAATGGTGAGGGAGAATACAAAGAGGGGGCGCATCCATaGTTAATTCACACCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TTNVCVVIPGQNGEGEYKEGAHP*LIHTLS Trigger: AGAGAGGGTGTGAATTAATCATGGATGCGCCCCCTC...TTTGTATTCTCCCTCACCATTTTGGCCAGGAATTACCACACAGACATTTGTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCTGGGCTTCTCTTGCATaGTGCAGACCTCCTATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTWASLA*CRPPIV Trigger: AACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCA...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | ACGCCAAGTGAAGCAGTTAGTAATGCTTTGTTACAGAGGGGGCGCATCCATGATCAGAGTGAACTCTTGTaGACTGCAACAGATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TPSEAVSNALLQRGRIHDQSELL*TATDEH Trigger: ATGTTCATCTGTTGCAGTGCACAAGAGTTCACTCTG...ATCATGGATGCGCCCCCTCTGTAACAAAGCATTACTAACTGCTTCACTTGGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | AAAGAGAGGTTTCACGTAACACAATGCAATCTTTTCAGCACAGGGAAAAAGTCCAGCATTACTGTTCCGTaGAAAATCGCCTGTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KERFHVTQCNLFSTGKKSSITVP*KIACAW Trigger: CCAGGCACAGGCGATTTTTCACGGAACAGTAATGCT...GGACTTTTTCCCTGTGCTGAAAAGATTGCATTGTGTTACGTGAAACCTCTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CCA 90 bp | ACGCCAAGTGAAGCAGTTAGTAATGCTTTGTTACAGAGGGGGCGCATCCATGATGTTCTTTCCTTTTCCTaGGATTTCCTAAGTAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: TPSEAVSNALLQRGRIHDVLSFS*DFLSSC Trigger: GCAACTACTTAGGAAATCCCAGGAAAAGGAAAGAAC...ATCATGGATGCGCCCCCTCTGTAACAAAGCATTACTAACTGCTTCACTTGGCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCACAACCAAGTGCTGTTaGGGAAAATCAATCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTTTKCC*GKSIQS Trigger: TGACTGGATTGATTTTCCTCAACAGCACTTGGTTGT...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GAGAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCAACCTCAAAAGCAGATTaGAACAAACAGATCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: ENGHFQINQSSHRVNSCATSKAD*NKQIHL Trigger: AAGATGGATCTGTTTGTTTCAATCTGCTTTTGAGGT...TGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCTTGAGAATTAAAGAGTaGTGCATTCCAGGTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTLRIKE*CIPGVL Trigger: AAGCACACCTGGAATGCATCACTCTTTAATTCTCAA...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCACTTGGAGGAAACGAACCTaGTATTTACTTACTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: EWSFPDKPVQPQSELLCTWRKRT*YLLTSR Trigger: TCTTGAAGTAAGTAAATATCAGGTTCGTTTCCTCCA...AGTGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | GAGAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCAGCCACGCCGAAGAAATaGTCATCTATATTTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: ENGHFQINQSSHRVNSCAATPKK*SSIFVF Trigger: AAAAACAAATATAGATGAGCATTTCTTCGGCGTGGC...TGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATTGCCTGGGCTTCTCTTaGATGCTGCAGACCTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: GPIISLWYTRVKIEVAHYCLGFS*MLQTSY Trigger: ATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCA...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATAGAATACAAAGGCCCTaGACGGATGCACTGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GPIISLWYTRVKIEVAHYRIQRP*TDALSR Trigger: CCTACTCAGTGCATCCGTTCAGGGCCTTTGTATTCT...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | CAGTTAGTAATGCTTTGTTACAGAGGGGGCGCATCCATGATTAATTCACACCCTATCTGCTCTCTGGAATaGGAACTATTTTATTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QLVMLCYRGGASMINSHPICSLE*ELFYWR Trigger: TCTCCAATAAAATAGTTCTCATTCCAGAGAGCAGAT...AGGGTGTGAATTAATCATGGATGCGCCCCCTCTGTAACAAAGCATTACTAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCACTGATATTTCCTTCTaGCCTTTAGATTGGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTTDISF*PLDWEI Trigger: AATCTCCCAATCTAAAGGCCAGAAGGAAATATCAGT...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CCA 90 bp | AATGCCTTCTCCCAAGTCATCCCTTATAATGTAATCCCCAGGCTTTTGACAACCTTAGTCTTCAGTAACTaGCTGTCAGTTTCTCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: NAFSQVIPYNVIPRLLTTLVFSN*LSVSLS Trigger: ACTTAGAGAAACTGACAGCCAGTTACTGAAGACTAA...GGTTGTCAAAAGCCTGGGGATTACATTATAAGGGATGACTTGGGAGAAGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | ACTACAAATGTCTGTGTGGTAATTCCTGGCCAAAATGGTGAGGGAGAATACAAATTTAAGGTAGAGGGTTaGCTTCAAAGAGAGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TTNVCVVIPGQNGEGEYKFKVEG*LQREVS Trigger: TGAAACCTCTCTTTGAAGTCAACCCTCTACCTTAAA...TTTGTATTCTCCCTCACCATTTTGGCCAGGAATTACCACACAGACATTTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | AAAGAGAGGTTTCACGTAACACAATGCAATCTTTTCAGCACAGGGAAAAAGTCCGAGTTCTTCCCTTTCTaGAAGGTTTTTGTCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KERFHVTQCNLFSTGKKSEFFPF*KVFVFR Trigger: TCTGAAGACAAAAACCTTGCAGAAAGGGAAGAACTC...GGACTTTTTCCCTGTGCTGAAAAGATTGCATTGTGTTACGTGAAACCTCTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | AAAGAGAGGTTTCACGTAACACAATGCAATCTTTTCAGCACAGGGAAAAAGTCCTTTCACGTAACACAATaGAATCTTTTCAGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: KERFHVTQCNLFSTGKKSFHVTQ*NLFSTG Trigger: CCCTGTGCTGAAAAGATTGCATTGTGTTACGTGAAA...GGACTTTTTCCCTGTGCTGAAAAGATTGCATTGTGTTACGTGAAACCTCTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | AAAGAGAGGTTTCACGTAACACAATGCAATCTTTTCAGCACAGGGAAAAAGTCCAGATTTGCTTTTACATaGCAGACATACGCTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: KERFHVTQCNLFSTGKKSRFAFT*QTYAKM Trigger: CATCTTAGCGTATGTCTGTCATGTAAAAGCAAATCT...GGACTTTTTCCCTGTGCTGAAAAGATTGCATTGTGTTACGTGAAACCTCTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | ACTACAAATGTCTGTGTGGTAATTCCTGGCCAAAATGGTGAGGGAGAATACAAAAGGAGCACTGAGATCTaGTATAATCAACACTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: TTNVCVVIPGQNGEGEYKRSTEI*YNQHSY Trigger: ATAAGAGTGTTGATTATAGCAGATCTCAGTGCTCCT...TTTGTATTCTCCCTCACCATTTTGGCCAGGAATTACCACACAGACATTTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CCA 90 bp | ACTACAAATGTCTGTGTGGTAATTCCTGGCCAAAATGGTGAGGGAGAATACAAAAATCAACACTCTTATTaGAAGCATTACTGTTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TTNVCVVIPGQNGEGEYKNQHSY*KHYCSV Trigger: CACGGAACAGTAATGCTTCCAATAAGAGTGTTGATT...TTTGTATTCTCCCTCACCATTTTGGCCAGGAATTACCACACAGACATTTGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR TCA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATTTTATGAAGCCTTGCTaGGAGTATTCGATGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GPIISLWYTRVKIEVAHYFMKPC*EYSMSH Trigger: ATGGCTCATCGAATACTCTCAGCAAGGCTTCATAAA...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATACCACTCCCTTTCTGTaGCCTCTATTAGACAACATA | + |
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Preference number: 4 (lower is better) Translates to: GPIISLWYTRVKIEVAHYTTPFL*PLLDNI Trigger: TATGTTGTCTAATAGAGGGCACAGAAAGGGAGTGGT...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CCA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATGAAAAGTGGAAGACATaGAAAGCTACAAGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: GPIISLWYTRVKIEVAHYEKWKT*KATRGK Trigger: CTTTCCCCTTGTAGCTTTCCATGTCTTCCACTTTTC...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR GCA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATAGAAAGTTTCTGCAGTaGCTGCAAGATATCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: GPIISLWYTRVKIEVAHYRKFLQ*LQDIFS Trigger: ACTAAAGATATCTTGCAGGCACTGCAGAAACTTTCT...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS TCA 90 bp | AGTGCTGACAGACTCGGCCCAGGCCGTCCCCCTGCCCAGCGGGCCTaGGAGTACGTGTGTCGCCGGGGCGCCCGGTCACTGCCGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SADRLGPGRPPAQRA*EYVCRRGARSLPSR Trigger: CCGGCTCGGCAGTGACCGGGCGCCCCGGCGACACACGTACTCTCAGGCCCGCTGGGCAGGGGGACGGCCTGGGCCGAGTCTGTCAGCACT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438404.5 |
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| CDS TCA 90 bp | TTTGGTGCTTCTCTCGGCCCAGGCCGTCCCCCTGCCCAGCGGGCCTaGGAGTACGTGTGTCGCCGGGGCGCCCGGTCACTGCCGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: FGASLGPGRPPAQRA*EYVCRRGARSLPSR Trigger: CCGGCTCGGCAGTGACCGGGCGCCCCGGCGACACACGTACTCTCAGGCCCGCTGGGCAGGGGGACGGCCTGGGCCGAGAGAAGCACCAAA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466954.5 |
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| CDS GCA 90 bp | CCCAGCGGGCCTGAGAGTACGTGTGTCGCCGGGGCGCCCGGTCACTaGCGAGCCGGGGTAGCTGTTCCTTGGCAAACTGTGCCGCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: PSGPESTCVAGAPGH*RAGVAVPWQTVPRG Trigger: TCCTCGCGGCACAGTTTGCCAAGGAACAGCTACCCCGGCTCGGCAGTGACCGGGCGCCCCGGCGACACACGTACTCTCAGGCCCGCTGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000358268.6 ENST00000411566.5 ENST00000438404.5 ENST00000466954.5 |
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| CDS TCA 90 bp | GGAAACGGCGGGGCGCCAGCGAGGCAGGCAGGGGCGAGGACTGAGTaGCCGGCGATACTGGAAGCCCAGAAAGAGCGTAGCAGGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GNGGAPARQAGARTE*PAILEAQKERSRRV Trigger: GACCCTCCTGCTACGCTCTTTCTGGGCTTCCAGTATCGCCGGTCACTCAGTCCTCGCCCCTGCCTGCCTCGCTGGCGCCCCGCCGTTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000358268.6 ENST00000411566.5 ENST00000438404.5 ENST00000466954.5 |
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| CDS CCA 90 bp | CGCCAGCGAGGCAGGCAGGGGCGAGGACTGAGTGACCGGCGATACTaGAAGCCCAGAAAGAGCGTAGCAGGAGGGTCCGGAAGGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RQRGRQGRGLSDRRY*KPRKSVAGGSGRAQ Trigger: CTGGGCCCTTCCGGACCCTCCTGCTACGCTCTTTCTGGGCTTCCAGTATCGCCGGTCACTCAGTCCTCGCCCCTGCCTGCCTCGCTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000358268.6 ENST00000411566.5 ENST00000438404.5 ENST00000466954.5 |
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| CDS TCA 90 bp | ACCACAGTTACTTTAGAGTCTCCGAAAGCATGGCTGGTGGAGGCCTaGCTGGGAGGCAGGGGATGCGACTCCTTACTTTGCAAAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: TTVTLESPKAWLVEA*LGGRGCDSLLCKGS Trigger: GGAGCCTTTGCAAAGTAAGGAGTCGCATCCCCTGCCTCCCAGTCAGGCCTCCACCAGCCATGCTTTCGGAGACTCTAAAGTAACTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 |
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| CDS GCA 90 bp | AAGCATTACTGTTCCGTGAAAAATCGCCTGTGCCTGGGCTTCTCTTaGATGCTGCAGACCTCCTATTGTTTTCTAATGCCACGCCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: KHYCSVKNRLCLGFS*MLQTSYCFLMPRRR Trigger: TCTTCGGCGTGGCATTAGAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCACAGGCGATTTTTCACGGAACAGTAATGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000426783.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS-3UTR CAA 90 bp | ACGCCAAGTGAAGCAGTTAGTAATGCTTTGTTACAGAGGGGGCGCATCCATGATGCAGTTAGTAATGCTTaGTTACAGAGGGGGCGCATC | + |
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Preference number: 5 (lower is better) Translates to: TPSEAVSNALLQRGRIHDAVSNA*LQRGRI Trigger: GATGCGCCCCCTCTGTAACAAAGCATTACTAACTGC...ATCATGGATGCGCCCCCTCTGTAACAAAGCATTACTAACTGCTTCACTTGGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS TCA 90 bp | CATACCCACTGTCAGAATGCTCTAGCTCCATTTCCTCTCTGTTACTaGGATGCTTGCCTGTACTATGACTGTACCTCATGTTGCCGGCAT | + |
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Preference number: 5 (lower is better) Translates to: HTHCQNALAPFPLCY*DACLYYDCTSCCRH Trigger: ATGCCGGCAACATGAGGTACAGTCATAGTACAGGCAAGCATCTCAGTAACAGAGAGGAAATGGAGCTAGAGCATTCTGACAGTGGGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS-3UTR CAA 90 bp | AAAGAGAGGTTTCACGTAACACAATGCAATCTTTTCAGCACAGGGAAAAAGTCCGTGCCTGGGCTTCTCTaGCATGCTGCAGACCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: KERFHVTQCNLFSTGKKSVPGLL*HAADLL Trigger: TAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCAC...GGACTTTTTCCCTGTGCTGAAAAGATTGCATTGTGTTACGTGAAACCTCTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CAA 90 bp | ACGCCAAGTGAAGCAGTTAGTAATGCTTTGTTACAGAGGGGGCGCATCCATGATGACAACCAAGTGCTGTaGAGGAAAATCAATCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: TPSEAVSNALLQRGRIHDDNQVL*RKINPV Trigger: GACTGGATTGATTTTCCTCAACAGCACTTGGTTGTC...ATCATGGATGCGCCCCCTCTGTAACAAAGCATTACTAACTGCTTCACTTGGCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS GCA 90 bp | ATTCTGGAAGACTTACCAAATGAGGGCTCATACCCACTGTCAGAATaGTCTAGCTCCATTTCCTCTCTGTTACTGAGATGCTTGCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: ILEDLPNEGSYPLSE*SSSISSLLLRCLPV Trigger: TACAGGCAAGCATCTCAGTAACAGAGAGGAAATGGAGCTAGAGCATTCTGACAGTGGGTATGAGCCCTCATTTGGTAAGTCTTCCAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS CCA 90 bp | AACTTCCACAGGAGCACTGAGATCTGCTATAATCAACACTCTTATTaGAAGCATTACTGTTCCGTGAAAAATCGCCTGTGCCTGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: NFHRSTEICYNQHSY*KHYCSVKNRLCLGF Trigger: GAAGCCCAGGCACAGGCGATTTTTCACGGAACAGTAATGCTTCCAATAAGAGTGTTGATTATAGCAGATCTCAGTGCTCCTGTGGAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000426783.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS TCA 90 bp | AGGAAGGTAGGAACAGATATAAGTAAGGCTTGCAGTTTTGGGAGCTaGAGAATGAGGGGATTCCCATGTGACAGCTTCAAGCTTCTCTAT | + |
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Preference number: 5 (lower is better) Translates to: RKVGTDISKACSFGS*RMRGFPCDSFKLLY Trigger: ATAGAGAAGCTTGAAGCTGTCACATGGGAATCCCCTCATTCTTCAGCTCCCAAAACTGCAAGCCTTACTTATATCTGTTCCTACCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480612.1 |
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| CDS-3UTR CAA 90 bp | GAGAATGGTCATTTCCAGATAAACCAGTCCAGCCACAGAGTGAACTCTTGTGCACTGTTAGATCTGGACTaGACAGAAAGCTTACCAAAA | + |
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Preference number: 5 (lower is better) Translates to: ENGHFQINQSSHRVNSCALLDLD*TESLPK Trigger: TTTTGGTAAGCTTTCTGTCAAGTCCAGATCTAACAG...TGCACAAGAGTTCACTCTGTGGCTGGACTGGTTTATCTGGAAATGACCATTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CAA 90 bp | GGCCCAATAATATCACTTTGGTATACAAGAGTGAAAATTGAGGTTGCTCATTATGCTGCAGACCTCCTATaGTTTTCTAATGCCACGCCG | + |
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Preference number: 5 (lower is better) Translates to: GPIISLWYTRVKIEVAHYAADLL*FSNATP Trigger: CGGCGTGGCATTAGAAAACAATAGGAGGTCTGCAGC...ATAATGAGCAACCTCAATTTTCACTCTTGTATACCAAAGTGATATTATTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS-3UTR CAA 90 bp | ACTACAAATGTCTGTGTGGTAATTCCTGGCCAAAATGGTGAGGGAGAATACAAAAACCTCAAAAGCAGATaGAAACAAACAGATCCATCT | + |
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Preference number: 5 (lower is better) Translates to: TTNVCVVIPGQNGEGEYKNLKSR*KQTDPS Trigger: AGATGGATCTGTTTGTTTCAATCTGCTTTTGAGGTT...TTTGTATTCTCCCTCACCATTTTGGCCAGGAATTACCACACAGACATTTGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000485895.6 |
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| CDS TCA 72 bp | AACCTCGGCCCAGGCCGTCCCCCTGCCCAGCGGGCCTaGGAGTACGTGTGTCGCCGGGGCGCCCGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: NLGPGRPPAQRA*EYVCRRGARSL Trigger: CAGTGACCGGGCGCCCCGGCGACACACGTACTCTCAGGCCCGCTGGGCAGGGGGACGGCCTGGGCCGAGGTT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358268.6 ENST00000411566.5 |
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| CDS TCA 72 bp | AGACTCGGCCCAGGCCGTCCCCCTGCCCAGCGGGCCTaGGAGTACGTGTGTCGCCGGGGCGCCCGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: RLGPGRPPAQRA*EYVCRRGARSL Trigger: CAGTGACCGGGCGCCCCGGCGACACACGTACTCTCAGGCCCGCTGGGCAGGGGGACGGCCTGGGCCGAGTCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438404.5 |
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| CDS TCA 72 bp | TCTCTCGGCCCAGGCCGTCCCCCTGCCCAGCGGGCCTaGGAGTACGTGTGTCGCCGGGGCGCCCGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: SLGPGRPPAQRA*EYVCRRGARSL Trigger: CAGTGACCGGGCGCCCCGGCGACACACGTACTCTCAGGCCCGCTGGGCAGGGGGACGGCCTGGGCCGAGAGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466954.5 |
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| CDS CCA 72 bp | GCGCCCGGTCACTGCCGAGCCGGGGTAGCTGTTCCTTaGCAAACTGTGCCGCGAGGAGGAAACGGCGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: APGHCRAGVAVP*QTVPRGGNGGA Trigger: CGCCCCGCCGTTTCCTCCTCGCGGCACAGTTTGCCAAGGAACAGCTACCCCGGCTCGGCAGTGACCGGGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000358268.6 ENST00000411566.5 ENST00000438404.5 ENST00000466954.5 |
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| CDS CAA 72 bp | GGCGCCCGGTCACTGCCGAGCCGGGGTAGCTGTTCCTaGGCAAACTGTGCCGCGAGGAGGAAACGGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GARSLPSRGSCS*ANCAARRKRRG Trigger: GCCCCGCCGTTTCCTCCTCGCGGCACAGTTTGCCAAGGAACAGCTACCCCGGCTCGGCAGTGACCGGGCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000358268.6 ENST00000411566.5 ENST00000438404.5 ENST00000466954.5 |
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| CDS GCA 72 bp | CTCTTTTGGTGCTTCTCTCGGCCCAGGCCGTCCCCCTaGCCAGCGGGCCTGAGAGTACGTGTGTCGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LFWCFSRPRPSP*PAGLRVRVSPG Trigger: CCCCGGCGACACACGTACTCTCAGGCCCGCTGGGCAGGGGGACGGCCTGGGCCGAGAGAAGCACCAAAAGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466954.5 |
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| CDS GCA 72 bp | CCTGAGAGTACGTGTGTCGCCGGGGCGCCCGGTCACTaGCGAGCCGGGGTAGCTGTTCCTTGGCAAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: PESTCVAGAPGH*RAGVAVPWQTV Trigger: CACAGTTTGCCAAGGAACAGCTACCCCGGCTCGGCAGTGACCGGGCGCCCCGGCGACACACGTACTCTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000358268.6 ENST00000411566.5 ENST00000438404.5 ENST00000466954.5 |
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| CDS CCA 72 bp | GGCAGGCAGGGGCGAGGACTGAGTGACCGGCGATACTaGAAGCCCAGAAAGAGCGTAGCAGGAGGGTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GRQGRGLSDRRY*KPRKSVAGGSG Trigger: TCCGGACCCTCCTGCTACGCTCTTTCTGGGCTTCCAGTATCGCCGGTCACTCAGTCCTCGCCCCTGCCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000358268.6 ENST00000411566.5 ENST00000438404.5 ENST00000466954.5 |
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| CDS CAA 90 bp | GAAGCATTACTGTTCCGTGAAAAATCGCCTGTGCCTGGGCTTCTCTaGCATGCTGCAGACCTCCTATTGTTTTCTAATGCCACGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: EALLFREKSPVPGLL*HAADLLLFSNATPK Trigger: CTTCGGCGTGGCATTAGAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCACAGGCGATTTTTCACGGAACAGTAATGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000426783.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS CAA 90 bp | GCAGGGGATGCGACTCCTTACTTTGCAAAGGCTCCTCTGAGCCTTTaGCAACACCAGGACTTGATTGGTCAGTTTTCAAGACATAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: AGDATPYFAKAPLSL*QHQDLIGQFSRHSL Trigger: CAGGCTATGTCTTGAAAACTGACCAATCAAGTCCTGGTGTTGCAAAAGGCTCAGAGGAGCCTTTGCAAAGTAAGGAGTCGCATCCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS CAA 72 bp | GTGCCTGGGCTTCTCTTGCATGCTGCAGACCTCCTATaGTTTTCTAATGCCACGCCGAAGAAATGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: VPGLLLHAADLL*FSNATPKKCSS Trigger: AGATGAGCATTTCTTCGGCGTGGCATTAGAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000426783.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS CAA 72 bp | CTGTTCCGTGAAAAATCGCCTGTGCCTGGGCTTCTCTaGCATGCTGCAGACCTCCTATTGTTTTCTAATGCC | + |
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Preference number: 6 (lower is better) Translates to: LFREKSPVPGLL*HAADLLLFSNA Trigger: GGCATTAGAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCACAGGCGATTTTTCACGGAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000426783.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS TCA 72 bp | TGTTTTACTTCCACCTGCAGAGTCTTGGTAGCTGTCTaGGCTGCTAAAGTCTTCCGAGTCTCAATAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CFTSTCRVLVAV*AAKVFRVSIAS Trigger: GCTGGCTATTGAGACTCGGAAGACTTTAGCAGCTCAGACAGCTACCAAGACTCTGCAGGTGGAAGTAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000484878.5 |
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| CDS GCA 72 bp | TGTTCCGTGAAAAATCGCCTGTGCCTGGGCTTCTCTTaGATGCTGCAGACCTCCTATTGTTTTCTAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: CSVKNRLCLGFS*MLQTSYCFLMP Trigger: TGGCATTAGAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCACAGGCGATTTTTCACGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000426783.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS GCA 72 bp | GACTTACCAAATGAGGGCTCATACCCACTGTCAGAATaGTCTAGCTCCATTTCCTCTCTGTTACTGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: DLPNEGSYPLSE*SSSISSLLLRC Trigger: GCATCTCAGTAACAGAGAGGAAATGGAGCTAGAGCATTCTGACAGTGGGTATGAGCCCTCATTTGGTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS CAA 72 bp | GCGACTCCTTACTTTGCAAAGGCTCCTCTGAGCCTTTaGCAACACCAGGACTTGATTGGTCAGTTTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: ATPYFAKAPLSL*QHQDLIGQFSR Trigger: TCTTGAAAACTGACCAATCAAGTCCTGGTGTTGCAAAAGGCTCAGAGGAGCCTTTGCAAAGTAAGGAGTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS CAA 90 bp | AAATCGCCTGTGCCTGGGCTTCTCTTGCATGCTGCAGACCTCCTATaGTTTTCTAATGCCACGCCGAAGAAATGCTCATCTATATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: KSPVPGLLLHAADLL*FSNATPKKCSSIFV Trigger: AACAAATATAGATGAGCATTTCTTCGGCGTGGCATTAGAAAACAATAGGAGGTCTGCAGCATGCAAGAGAAGCCCAGGCACAGGCGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000426783.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS TCA 72 bp | GGAACAGATATAAGTAAGGCTTGCAGTTTTGGGAGCTaGAGAATGAGGGGATTCCCATGTGACAGCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GTDISKACSFGS*RMRGFPCDSFK Trigger: CTTGAAGCTGTCACATGGGAATCCCCTCATTCTTCAGCTCCCAAAACTGCAAGCCTTACTTATATCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480612.1 |
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| CDS CAA 90 bp | CCTTACTTTGCAAAGGCTCCTCTGAGCCTTTTGCAACACCAGGACTaGATTGGTCAGTTTTCAAGACATAGCCTGATCCAAAGAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PYFAKAPLSLLQHQD*IGQFSRHSLIQRVL Trigger: AAGAACTCTTTGGATCAGGCTATGTCTTGAAAACTGACCAATCAAGTCCTGGTGTTGCAAAAGGCTCAGAGGAGCCTTTGCAAAGTAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS TCA 72 bp | TGTCAGAATGCTCTAGCTCCATTTCCTCTCTGTTACTaGGATGCTTGCCTGTACTATGACTGTACCTCATGT | + |
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Preference number: 6 (lower is better) Translates to: CQNALAPFPLCY*DACLYYDCTSC Trigger: ACATGAGGTACAGTCATAGTACAGGCAAGCATCTCAGTAACAGAGAGGAAATGGAGCTAGAGCATTCTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS CCA 72 bp | TGCAGTGCCTGCAAGATATCTTTAGTCTTCAGTAACTaGCTGTCAGTTTCTCTAAGTTTCCTAGATAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: CSACKISLVFSN*LSVSLSFLDRV Trigger: AACTCTATCTAGGAAACTTAGAGAAACTGACAGCCAGTTACTGAAGACTAAAGATATCTTGCAGGCACTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000459939.5 ENST00000485895.6 ENST00000491625.5 |
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| CDS GCA 72 bp | ACTGAGAACTTAAACTTCCACAGGAGCACTGAGATCTaGTATAATCAACACTCTTATTGGAAGCATTACTGT | + |
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Preference number: 6 (lower is better) Translates to: TENLNFHRSTEI*YNQHSYWKHYC Trigger: ACAGTAATGCTTCCAATAAGAGTGTTGATTATAGCAGATCTCAGTGCTCCTGTGGAAGTTTAAGTTCTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000411566.5 ENST00000415863.5 ENST00000418018.5 ENST00000434281.5 ENST00000438404.5 ENST00000448288.6 ENST00000468009.6 ENST00000485895.6 |
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| CDS CCA 72 bp | TTGTCTTTTTGTCTTCCAGTATTCTCCAGCAGTATTTaGACTTCCAAATGTTTCTCTTCCCCTGATAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LSFCLPVFSSSI*TSKCFSSPDKS Trigger: AGATTTATCAGGGGAAGAGAAACATTTGGAAGTCCAAATACTGCTGGAGAATACTGGAAGACAAAAAGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000288350.8 ENST00000358268.6 ENST00000380671.6 ENST00000495240.1 |
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| CDS TCA 72 bp | TTCTGTCTGCTTGGACTGATTTTGTTGAAGAAACAATaGGAGGTATACACTAATGATAGTGGCATCAATATA | + |
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Preference number: 6 (lower is better) Translates to: FCLLGLILLKKQ*EVYTNDSGINI Trigger: TATATTGATGCCACTATCATTAGTGTATACCTCTCATTGTTTCTTCAACAAAATCAGTCCAAGCAGACAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495240.1 |
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