Pregenerated sensors for LBX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000138136Ensembl transcript IDs: ENST00000370193.3, ENST00000370193.4
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCGCTaGTGGCGGCCGGCCCGGCCGGCCAGCCTGGGTTTATTGCTTCGA | + |
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Preference number: 1 (lower is better) Translates to: HTELHGEGFRGGGGR*WRPARPASLGLLLR Trigger: TCGAAGCAATAAACCCAGGCTGGCCGGCCGGGCCGGCCGCCACCAGCGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR GCA 90 bp | GTCAACTGCAATAAGGCCGAGGGAGGCGAGGAAGGAGCGGGCCGGTaGATTCGCCACATGCAGAGAAAAATCAAAACAGCCGGAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: VNCNKAEGGEEGAGR*IRHMQRKIKTAGAA Trigger: GGCAGCTCCGGCTGTTTTGATTTTTCTCTGCATGTGGCGAATGCACCGGCCCGCTCCTTCCTCGCCTCCCTCGGCCTTATTGCAGTTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR GCA 90 bp | TGCATTGTCCCTAAGAGCCGGACTCCAACAGTCAGTCCGAGGAAATaGGGGAGGGAGGGAGGAATCTTAAAAACAGCATTAGTGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: CIVPKSRTPTVSPRK*GREGGILKTALVGI Trigger: AATGCCCACTAATGCTGTTTTTAAGATTCCTCCCTCCCTCCCGCATTTCCTCGGACTGACTGTTGGAGTCCGGCTCTTAGGGACAATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CAA 90 bp | GCAGAGGAGGTCCCAGCTCCCCTCGGCGGTCCGGTCCGGGAGGCGTaGGGCTTTCGAGCGCTAGGAGCCCAGGGCGGCGGAAGACCCGGG | + |
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Preference number: 2 (lower is better) Translates to: AEEVPAPLGGPVREA*GFRALGAQGGGRPG Trigger: CCCGGGTCTTCCGCCGCCCTGGGCTCCTAGCGCTCGAAAGCCCAACGCCTCCCGGACCGGACCGCCGAGGGGAGCTGGGACCTCCTCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCCATACAGAATTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCGCTGGTGCCCGGCCGGCCAGCCTaGGTTTATTGCTTCGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: KPYRIARRGLPGRRRPLVPGRPA*VYCFER Trigger: CCTCTCGAAGCAATAAACCCAGGCTGGCCGGCCGGG...CACCAGCGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR GCA 90 bp | GGTTGGATTTCCCCCTGCATTGTCCCTAAGAGCCGGACTCCAACAGTCAGTCCGGAAGGAGCGGGCCGGTaGATTCGCCACATGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GWISPCIVPKSRTPTVSPEGAGR*IRHMQR Trigger: TCTCTGCATGTGGCGAATGCACCGGCCCGCTCCTTC...CGGACTGACTGTTGGAGTCCGGCTCTTAGGGACAATGCAGGGGGAAATCCAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCGAAGTGGCAAGAGAGACCCAGAGCTGTGGAGGAGGTGAGGTGAGGGCTGGTTGGATTTCCCCCTaGATTGTCCCTAAGAGCCGG | + |
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Preference number: 2 (lower is better) Translates to: VFEVARETQSCGGGEVRAGWISP*IVPKSR Trigger: CCGGCTCTTAGGGACAATGCAGGGGGAAATCCAACC...AGCCCTCACCTCACCTCCTCCACAGCTCTGGGTCTCTCTTGCCACTTCGAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CAA 90 bp | TTGGGTTCTGTTTTCGATAGTTGGTTGGTTGGATTTCCCCCTGCATaGTCCCTAAGAGCCGGACTCCAACAGTCAGTCCGAGGAAATGCG | + |
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Preference number: 2 (lower is better) Translates to: LGSVFDSWLVGFPPA*SLRAGLQQSVRGNA Trigger: CGCATTTCCTCGGACTGACTGTTGGAGTCCGGCTCTTAGGGACAATGCAGGGGGAAATCCAACCAACCAACTATCGAAAACAGAACCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAATGGCAAAGACTTTATTTATTGGAGAAAGAGGCCTTGGGTACAGTCTAGAAGCCATACAGAATTaGACGGCGAGGGCTTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: SKMAKTLFIGERGLGYSLEAIQN*TARASG Trigger: CCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTC...TAGACTGTACCCAAGGCCTCTTTCTCCAATAAATAAAGTCTTTGCCATTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAATGGCAAAGACTTTATTTATTGGAGAAAGAGGCCTTGGGTACAGTCTAATTAGGAGGCAGAAATaGCATCGAAAACAGACTTTT | + |
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Preference number: 2 (lower is better) Translates to: SKMAKTLFIGERGLGYSLIRRQK*HRKQTF Trigger: AAAAGTCTGTTTTCGATGCCATTTCTGCCTCCTAAT...TAGACTGTACCCAAGGCCTCTTTCTCCAATAAATAAAGTCTTTGCCATTTTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CCA 72 bp | TTGCACGGCGAGGGCTTCCGGGGCGGCGGAGGCCGCTaGTGGCGGCCGGCCCGGCCGGCCAGCCTGGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: LHGEGFRGGGGR*WRPARPASLGL Trigger: TAAACCCAGGCTGGCCGGCCGGGCCGGCCGCCACCAGCGGCCTCCGCCGCCCCGGAAGCCCTCGCCGTGCAA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR GCA 72 bp | GGTGGCGGCCGGCCCGGCCGGCCAGCCTGGGTTTATTaGTTCGAGAGGGAAGAGGCGGCTGCCAGGAGCCGA | + |
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Preference number: 3 (lower is better) Translates to: GGGRPGRPAWVY*FEREEAAARSR Trigger: TCGGCTCCTGGCAGCCGCCTCTTCCCTCTCGAAGCAATAAACCCAGGCTGGCCGGCCGGGCCGGCCGCCACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR CAA 90 bp | AGGCCCGAGGAAATAGAAGTCAACTGCAATAAGGCCGAGGGAGGCGAGGAAGGACCGGTCCGGGAGGCGTaGGGCTTTCGAGCGCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: RPEEIEVNCNKAEGGEEGPVREA*GFRALG Trigger: TCCTAGCGCTCGAAAGCCCAACGCCTCCCGGACCGG...TCCTTCCTCGCCTCCCTCGGCCTTATTGCAGTTGACTTCTATTTCCTCGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CCA 72 bp | CTCTGGCCAAGTCGGGTAGGAGTGGGGTGTTCGAAGTaGCAAGAGAGACCCAGAGCTGTGGAGGAGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LWPSRVGVGCSK*QERPRAVEEVR Trigger: CCTCACCTCCTCCACAGCTCTGGGTCTCTCTTGCCACTTCGAACACCCCACTCCTACCCGACTTGGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR CAA 90 bp | GCCACTCCCCTAGACCGCAGGGTTAGTGTTCCCCGCCCTGGTTTCTGTCTCGCCGGCAGCCCGAGAGCTTaGAAAACATCGAAATCTCCG | + |
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Preference number: 3 (lower is better) Translates to: ATPLDRRVSVPRPGFCLAGSPRA*KTSKSP Trigger: CGGAGATTTCGATGTTTTCAAAGCTCTCGGGCTGCC...GGCGAGACAGAAACCAGGGCGGGGAACACTAACCCTGCGGTCTAGGGGAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR GCA 72 bp | GAGGCGAGGAAGGAGCGGGCCGGTGCATTCGCCACATaGAGAGAAAAATCAAAACAGCCGGAGCTGCCACTC | + |
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Preference number: 3 (lower is better) Translates to: EARKERAGAFAT*REKSKQPELPL Trigger: GAGTGGCAGCTCCGGCTGTTTTGATTTTTCTCTGCATGTGGCGAATGCACCGGCCCGCTCCTTCCTCGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR CAA 90 bp | GGTTGGATTTCCCCCTGCATTGTCCCTAAGAGCCGGACTCCAACAGTCAGTCCGAGAAGCCATACAGAATaGCACGGCGAGGGCTTCCGG | + |
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Preference number: 3 (lower is better) Translates to: GWISPCIVPKSRTPTVSPRSHTE*HGEGFR Trigger: CCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCT...CGGACTGACTGTTGGAGTCCGGCTCTTAGGGACAATGCAGGGGGAAATCCAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGGTTGGATTTCCCCCTGCATTGTCCCTAAGAGCCGGACTCCAACAGTCGAGGAAAGATCGATTTaGAAACTTGCAAGTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LVGWISPCIVPKSRTPTVEERSI*KLASQD Trigger: GTCCTGACTTGCAAGTTTCAAAATCGATCTTTCCTC...GACTGTTGGAGTCCGGCTCTTAGGGACAATGCAGGGGGAAATCCAACCAACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CCA 72 bp | AATAATTATAGGGCTTTGGGTTCTGTTTTCGATAGTTaGTTGGTTGGATTTCCCCCTGCATTGTCCCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: NNYRALGSVFDS*LVGFPPALSLR Trigger: TCTTAGGGACAATGCAGGGGGAAATCCAACCAACCAACTATCGAAAACAGAACCCAAAGCCCTATAATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CAA 72 bp | GTCCCAGCTCCCCTCGGCGGTCCGGTCCGGGAGGCGTaGGGCTTTCGAGCGCTAGGAGCCCAGGGCGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: VPAPLGGPVREA*GFRALGAQGGG Trigger: TCCGCCGCCCTGGGCTCCTAGCGCTCGAAAGCCCAACGCCTCCCGGACCGGACCGCCGAGGGGAGCTGGGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CAA 72 bp | TGGTGGCGGCCGGCCCGGCCGGCCAGCCTGGGTTTATaGCTTCGAGAGGGAAGAGGCGGCTGCCAGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: WWRPARPASLGL*LREGRGGCQEP Trigger: CGGCTCCTGGCAGCCGCCTCTTCCCTCTCGAAGCAATAAACCCAGGCTGGCCGGCCGGGCCGGCCGCCACCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CAA 72 bp | GTTTTCGATAGTTGGTTGGTTGGATTTCCCCCTGCATaGTCCCTAAGAGCCGGACTCCAACAGTCAGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: VFDSWLVGFPPA*SLRAGLQQSVR Trigger: TCGGACTGACTGTTGGAGTCCGGCTCTTAGGGACAATGCAGGGGGAAATCCAACCAACCAACTATCGAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| 3UTR CAA 72 bp | AATTATAGGGCTTTGGGTTCTGTTTTCGATAGTTGGTaGGTTGGATTTCCCCCTGCATTGTCCCTAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NYRALGSVFDSW*VGFPPALSLRA Trigger: GGCTCTTAGGGACAATGCAGGGGGAAATCCAACCAACCAACTATCGAAAACAGAACCCAAAGCCCTATAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.3 |
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| CDS TCA 90 bp | CTTCCTCGTCCTCCGAGCAGTCCTGGCTGCTGGCCGGCTGGTCCGTaGGCGGAGAGGCAGGCGAGAGCTGCAGGGCGCCAGCGCCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: LPRPPSSPGCWPAGP*AERQARAAGRQRPG Trigger: CCCCGGGCGCTGGCGCCCTGCAGCTCTCGCCTGCCTCTCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGGACGAGGAAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 90 bp | CTGAACGGCGTCAGTGGCTTGTTGGAGTTGGCAGGCGGAGGCAGGTaGTCCAGCGGGCTGCGCCGCCGCTCCTCCCCCGGCGCCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LNGVSGLLELAGGGR*SSGLRRRSSPGAAL Trigger: CAAGGCGGCGCCGGGGGAGGAGCGGCGGCGCAGCCCGCTGGACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 90 bp | TTAAAGGTGTCAGGTGGCTCGGCAGTGGCTCCTGGCCCCGGGTCCTaGCGGCCGCAGTTGGAAGAGCCGAGGCGAGGGCGCCGATCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LKVSGGSAVAPGPGS*RPQLEEPRRGRRSR Trigger: CCGGGATCGGCGCCCTCGCCTCGGCTCTTCCAACTGCGGCCGCCAGGACCCGGGGCCAGGAGCCACTGCCGAGCCACCTGACACCTTTAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 90 bp | TCTTCGTCTTCCTCGTCCTCCGAGCAGTCCTGGCTGCTGGCCGGCTaGTCCGTGAGCGGAGAGGCAGGCGAGAGCTGCAGGGCGCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SSSSSSSEQSWLLAG*SVSGEAGESCRAPA Trigger: CGCTGGCGCCCTGCAGCTCTCGCCTGCCTCTCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGGACGAGGAAGACGAAGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 90 bp | ACCCCGGTGCTATTTAAAGGTGTCAGGTGGCTCGGCAGTGGCTCCTaGCCCCGGGTCCTGGCGGCCGCAGTTGGAAGAGCCGAGGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: TPVLFKGVRWLGSGS*PRVLAAAVGRAEAR Trigger: CCTCGCCTCGGCTCTTCCAACTGCGGCCGCCAGGACCCGGGGCCAGGAGCCACTGCCGAGCCACCTGACACCTTTAAATAGCACCGGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 90 bp | TCGTCCACGTCGATCTCTTCGTCTTCCTCGTCCTCCGAGCAGTCCTaGCTGCTGGCCGGCTGGTCCGTGAGCGGAGAGGCAGGCGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SSTSISSSSSSSEQS*LLAGWSVSGEAGES Trigger: GCTCTCGCCTGCCTCTCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGGACGAGGAAGACGAAGAGATCGACGTGGACGA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 90 bp | GCGGCCGCAGTTGGAAGAGCCGAGGCGAGGGCGCCGATCCCGGACTaGGAGGGAGGCGGAGAGACGGGGCAATTGACTATTGCTAACAAG | + |
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Preference number: 5 (lower is better) Translates to: AAAVGRAEARAPIPD*EGGGETGQLTIANK Trigger: CTTGTTAGCAATAGTCAATTGCCCCGTCTCTCCGCCTCCCTCGCAGTCCGGGATCGGCGCCCTCGCCTCGGCTCTTCCAACTGCGGCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 90 bp | GCCTCCGAGTTCTGCTCGAGTTCGGCCAGCGCCACGATGTCCATCTaGCCGCTGGGGCCCAGTTTCTTGGCGGACTCTACGTCGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ASEFCSSSASATMSI*PLGPSFLADSTSAF Trigger: GAAGGCCGACGTAGAGTCCGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACTCGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 90 bp | GTGAAGGCCGTGCGCGACTTTCGCCGCTTCTTAGGGGTCTGCCGCTaGCCAAAGATGGTCATACCGTCGCGGCCTTCGGCTGCCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VKAVRDFRRFLGVCR*PKMVIPSRPSAACR Trigger: TCTGCAGGCAGCCGAAGGCCGCGACGGTATGACCATCTTTGGGCAGCGGCAGACCCCTAAGAAGCGGCGAAAGTCGCGCACGGCCTTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 90 bp | CACAGACGGCTTGTTGAGGATGTCCTCGATGCTGAACGGCGTCAGTaGCTTGTTGGAGTTGGCAGGCGGAGGCAGGTGGTCCAGCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: HRRLVEDVLDAERRQ*LVGVGRRRQVVQRA Trigger: AGCCCGCTGGACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCCGTCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 90 bp | AGTTCTGCTCGAGTTCGGCCAGCGCCACGATGTCCATCTGCCCGCTaGGGCCCAGTTTCTTGGCGGACTCTACGTCGGCCTTCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSARVRPAPRCPSAR*GPVSWRTLRRPSSP Trigger: AGGAGATGAAGGCCGACGTAGAGTCCGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS TCA 72 bp | CCTCCGAGCAGTCCTGGCTGCTGGCCGGCTGGTCCGTaGGCGGAGAGGCAGGCGAGAGCTGCAGGGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PPSSPGCWPAGP*AERQARAAGRQ Trigger: CTGGCGCCCTGCAGCTCTCGCCTGCCTCTCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 72 bp | GCCGCTCCTCCCCCGGCGCCGCCTTGCCGTCCTCCTTaGAAGTCATCTCGGCCTTGTTCGGGGTCCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AAPPPAPPCRPP*KSSRPCSGSRP Trigger: CGGCCGGGACCCCGAACAAGGCCGAGATGACTTCCAAGGAGGACGGCAAGGCGGCGCCGGGGGAGGAGCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CAA 90 bp | AGGTGGTCCAGCGGGCTGCGCCGCCGCTCCTCCCCCGGCGCCGCCTaGCCGTCCTCCTTGGAAGTCATCTCGGCCTTGTTCGGGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: RWSSGLRRRSSPGAA*PSSLEVISALFGVP Trigger: CGGGACCCCGAACAAGGCCGAGATGACTTCCAAGGAGGACGGCAAGGCGGCGCCGGGGGAGGAGCGGCGGCGCAGCCCGCTGGACCACCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 72 bp | CAGCCGCCGCCACCGCCGGCTGTGGCCTCCGAGTTCTaGTCGAGTTCGGCCAGCGCCACGATGTCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: QPPPPPAVASEF*SSSASATMSIC Trigger: GCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACTCGGAGGCCACAGCCGGCGGTGGCGGCGGCTG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 72 bp | TCCTCGTCCTCCGAGCAGTCCTGGCTGCTGGCCGGCTaGTCCGTGAGCGGAGAGGCAGGCGAGAGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSSEQSWLLAG*SVSGEAGESCR Trigger: CCTGCAGCTCTCGCCTGCCTCTCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGGACGAGGA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 72 bp | CGAGTTCGGCCAGCGCCACGATGTCCATCTGCCCGCTaGGGCCCAGTTTCTTGGCGGACTCTACGTCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RVRPAPRCPSAR*GPVSWRTLRRP Trigger: AGGCCGACGTAGAGTCCGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CAA 90 bp | GGCTTGTTGAGGATGTCCTCGATGCTGAACGGCGTCAGTGGCTTGTaGGAGTTGGCAGGCGGAGGCAGGTGGTCCAGCGGGCTGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GLLRMSSMLNGVSGL*ELAGGGRWSSGLRR Trigger: GCGGCGCAGCCCGCTGGACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 72 bp | GCGCGCTGCGCGGGGCTCCAGTTTCGCCAACCCCGGTaGTATTTAAAGGTGTCAGGTGGCTCGGCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARCAGLQFRQPR*YLKVSGGSAVA Trigger: AGCCACTGCCGAGCCACCTGACACCTTTAAATAGCACCGGGGTTGGCGAAACTGGAGCCCCGCGCAGCGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 72 bp | CAGGTGATGACTTGCGCGTTGGTGAGGCCCAGCTGCTaGGCGATTTGGTCGCGATCGGCGGGGGACAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: QVMTCALVRPSC*AIWSRSAGDRY Trigger: GTACCTGTCCCCCGCCGATCGCGACCAAATCGCGCAGCAGCTGGGCCTCACCAACGCGCAAGTCATCACCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 72 bp | AACCAGGTGATGACTTGCGCGTTGGTGAGGCCCAGCTaGTGCGCGATTTGGTCGCGATCGGCGGGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: NQVMTCALVRPS*CAIWSRSAGDR Trigger: CCTGTCCCCCGCCGATCGCGACCAAATCGCGCAGCAGCTGGGCCTCACCAACGCGCAAGTCATCACCTGGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 72 bp | TCGATCTCTTCGTCTTCCTCGTCCTCCGAGCAGTCCTaGCTGCTGGCCGGCTGGTCCGTGAGCGGAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SISSSSSSSEQS*LLAGWSVSGEA Trigger: TGCCTCTCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGGACGAGGAAGACGAAGAGATCGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CAA 90 bp | GACGGCTTGTTGAGGATGTCCTCGATGCTGAACGGCGTCAGTGGCTaGTTGGAGTTGGCAGGCGGAGGCAGGTGGTCCAGCGGGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: DGLLRMSSMLNGVSG*LELAGGGRWSSGLR Trigger: GCGCAGCCCGCTGGACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 72 bp | GTGCGCGACTTTCGCCGCTTCTTAGGGGTCTGCCGCTaGCCAAAGATGGTCATACCGTCGCGGCCTTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: VRDFRRFLGVCR*PKMVIPSRPSA Trigger: AGCCGAAGGCCGCGACGGTATGACCATCTTTGGGCAGCGGCAGACCCCTAAGAAGCGGCGAAAGTCGCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 72 bp | AAGGCCGTGCGCGACTTTCGCCGCTTCTTAGGGGTCTaGCGCTGCCCAAAGATGGTCATACCGTCGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KAVRDFRRFLGV*RCPKMVIPSRP Trigger: AGGCCGCGACGGTATGACCATCTTTGGGCAGCGGCAGACCCCTAAGAAGCGGCGAAAGTCGCGCACGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS GCA 72 bp | TTCTGCTCGAGTTCGGCCAGCGCCACGATGTCCATCTaGCCGCTGGGGCCCAGTTTCTTGGCGGACTCTACG | + |
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Preference number: 6 (lower is better) Translates to: FCSSSASATMSI*PLGPSFLADST Trigger: CGTAGAGTCCGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CAA 72 bp | AGGATGTCCTCGATGCTGAACGGCGTCAGTGGCTTGTaGGAGTTGGCAGGCGGAGGCAGGTGGTCCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: RMSSMLNGVSGL*ELAGGGRWSSG Trigger: CCCGCTGGACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAGCATCGAGGACATCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CAA 72 bp | GACTTGCGCGTTGGTGAGGCCCAGCTGCTGCGCGATTaGGTCGCGATCGGCGGGGGACAGGTACTTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: DLRVGEAQLLRD*VAIGGGQVLLV Trigger: TACCAGAAGTACCTGTCCCCCGCCGATCGCGACCAAATCGCGCAGCAGCTGGGCCTCACCAACGCGCAAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 72 bp | ACTTGCGCGTTGGTGAGGCCCAGCTGCTGCGCGATTTaGTCGCGATCGGCGGGGGACAGGTACTTCTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: TCALVRPSCCAI*SRSAGDRYFWY Trigger: ATACCAGAAGTACCTGTCCCCCGCCGATCGCGACCAAATCGCGCAGCAGCTGGGCCTCACCAACGCGCAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 72 bp | CCACGATGTCCATCTGCCCGCTGGGGCCCAGTTTCTTaGCGGACTCTACGTCGGCCTTCATCTCCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PRCPSARWGPVS*RTLRRPSSPPG Trigger: ACCTGGAGGAGATGAAGGCCGACGTAGAGTCCGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CAA 72 bp | TTGAGGATGTCCTCGATGCTGAACGGCGTCAGTGGCTaGTTGGAGTTGGCAGGCGGAGGCAGGTGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LRMSSMLNGVSG*LELAGGGRWSS Trigger: GCTGGACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAGCATCGAGGACATCCTCAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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| CDS CCA 72 bp | CTTGTTGAGGATGTCCTCGATGCTGAACGGCGTCAGTaGCTTGTTGGAGTTGGCAGGCGGAGGCAGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LVEDVLDAERRQ*LVGVGRRRQVV Trigger: GACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAGCATCGAGGACATCCTCAACAAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370193.4 |
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