Pregenerated sensors for LBHD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000283071Ensembl transcript IDs: ENST00000634353.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCAGGGCTGCGGTCCAGACCCTGTGACACAGGAAGCAGCCTCTaGGCTTTCCAGGCTGGGCAGGCCCGGCCCTCCTGTGCATCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RAGLRSRPCDTGSSL*AFQAGQARPSCASA Trigger: GGCTGATGCACAGGAGGGCCGGGCCTGCCCAGCCTGGAAAGCCCAGAGGCTGCTTCCTGTGTCACAGGGTCTGGACCGCAGCCCTGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| 3UTR TCA 90 bp | GAAGTGCCTTTATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTaGTCCAGACCTGGGCCATGGGCAGAAGAGGGCAGGGCTGCGGTC | + |
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Preference number: 1 (lower is better) Translates to: EVPLFLLQTTEQSGV*SRPGPWAEEGRAAV Trigger: GACCGCAGCCCTGCCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATAAAGGCACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| 3UTR-3UTR CCA 90 bp | CCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGAGGGCATCAGCCCGGCCACCCTaGGGCAGAGGCCCTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PRNKAGCDPDLGHGQKRASARPP*GRGPQQ Trigger: CTGCTGAGGGCCTCTGCCCCAGGGTGGCCGGGCTGA...TGCCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| 3UTR-3UTR CCA 90 bp | CCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGAGGGCACTGGGCTTTCCAGGCTaGGCAGGCCCGGCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PRNKAGCDPDLGHGQKRALGFPG*AGPALL Trigger: CAGGAGGGCCGGGCCTGCCCAGCCTGGAAAGCCCAG...TGCCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGGCGGTCCAGACCCTGTaGCACAGGAAGCAGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FCFKPRNKAGCDPDLGHGAVQTL*HRKQPL Trigger: CAGAGGCTGCTTCCTGTGTCACAGGGTCTGGACCGC...CCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| 3UTR-3UTR GCA 90 bp | TATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATAGAAGAGGGCAGGGCTaGGGTCCAGACCCTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: YFCFKPRNKAGCDPDLGHRRGQG*GPDPVT Trigger: TGTCACAGGGTCTGGACCGCAGCCCTGCCCTCTTCT...ATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| 3UTR CCA 72 bp | TCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTaGGCCATGGGCAGAAGAGGGCAGGGCTGCGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: SNHGTKRGVIQT*AMGRRGQGCGP Trigger: TGGACCGCAGCCCTGCCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR TCA 90 bp | CCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGAGGGCAGGGCTCCACCACGATTaGGGGCAGCCGCTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRNKAGCDPDLGHGQKRAGLHHD*GQPLAQ Trigger: CTGGGCCAGCGGCTGCCCTCAATCGTGGTGGAGCCC...TGCCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGCCGGGCCGGGGCTGCTaGGTCCTCGGAGCAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: FKPRNKAGCDPDLGHGQKPGRGC*VLGAGT Trigger: TGTGCCTGCTCCGAGGACCCAGCAGCCCCGGCCCGG...CTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGTCAGCCCGGCCACCCTaGGGCAGAGGCCCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FKPRNKAGCDPDLGHGQKSARPP*GRGPQQ Trigger: CTGCTGAGGGCCTCTGCCCCAGGGTGGCCGGGCTGA...CTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCTGGGCTTTCCAGGCTaGGCAGGCCCGGCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FCFKPRNKAGCDPDLGHGLGFPG*AGPALL Trigger: CAGGAGGGCCGGGCCTGCCCAGCCTGGAAAGCCCAG...CCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR TCA 90 bp | CCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGAGGGCAGAACAAAGCGGGGTGTaGTCCAGACCTGGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: PRNKAGCDPDLGHGQKRAEQSGV*SRPGPW Trigger: CCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTC...TGCCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR GCA 90 bp | CCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGAGGGCAAGAAGAGGGCAGGGCTaGGGTCCAGACCCTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: PRNKAGCDPDLGHGQKRARRGQG*GPDPVT Trigger: TGTCACAGGGTCTGGACCGCAGCCCTGCCCTCTTCT...TGCCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR TCA 90 bp | TATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGCAGCAGCCCGGCTCTaGGAGGGGCCCCTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YFCFKPRNKAGCDPDLGHAAARL*EGPLWA Trigger: TGCCCAGAGGGGCCCCTCTCAGAGCCGGGCTGCTGC...ATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGCACAGCCTTCCCTTCTaGGCCTCCAGCCCCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FKPRNKAGCDPDLGHGQKHSLPF*ASSPLS Trigger: GCTGAGGGGGCTGGAGGCCCAGAAGGGAAGGCTGTG...CTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGCAGGGTCCGCCTCGCTaGGCTCCACCACGATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: FKPRNKAGCDPDLGHGQKQGPPR*APPRLR Trigger: CCTCAATCGTGGTGGAGCCCAGCGAGGCGGACCCTG...CTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR GCA 90 bp | TATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGGAGGGGCGACCCTaGGCCACACTCACGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: YFCFKPRNKAGCDPDLGHGEGRP*ATLTLT Trigger: GGTGAGCGTGAGTGTGGCGCAGGGTCGCCCCTCCCC...ATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR GCA 90 bp | TTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGTGCTGCTGCCGCCACTaGGCCACTAAGCTGCACGAG | + |
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Preference number: 4 (lower is better) Translates to: FCFKPRNKAGCDPDLGHGCCCRH*ATKLHE Trigger: CTCGTGCAGCTTAGTGGCGCAGTGGCGGCAGCAGCA...CCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGTCCAGACCTGGGCCATaGGCAGAAGAGGGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FCFKPRNKAGCDPDLGHGSRPGP*AEEGRA Trigger: AGCCCTGCCCTCTTCTGCCCATGGCCCAGGTCTGGA...CCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGGGTGTGATCCAGACCTaGGCCATGGGCAGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: FKPRNKAGCDPDLGHGQKGVIQT*AMGRRG Trigger: CCCTCTTCTGCCCATGGCCCAGGTCTGGATCACACC...CTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CCA 90 bp | TTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGATCTGCAGCTTTCCCTaGTTCTCCGGGCAGACTCGG | + |
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Preference number: 4 (lower is better) Translates to: FKPRNKAGCDPDLGHGQKICSFP*FSGQTR Trigger: CCGAGTCTGCCCGGAGAACCAGGGAAAGCTGCAGAT...CTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR TCA 90 bp | TATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGCGGTCCAGACCCTGTaGCACAGGAAGCAGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: YFCFKPRNKAGCDPDLGHAVQTL*HRKQPL Trigger: CAGAGGCTGCTTCCTGTGTCACAGGGTCTGGACCGC...ATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR GCA 90 bp | TATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGTGCTCATGCTGCTaGCGCCACTGCGCCACTAAG | + |
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Preference number: 4 (lower is better) Translates to: YFCFKPRNKAGCDPDLGHGCSCC*RHCATK Trigger: CTTAGTGGCGCAGTGGCGGCAGCAGCATGAGCACCC...ATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR GCA 90 bp | TTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGGCTGCCAGCGTTATCTaGAGCTTTCCCTGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FCFKPRNKAGCDPDLGHGAASVI*SFPWFS Trigger: GGAGAACCAGGGAAAGCTGCAGATAACGCTGGCAGC...CCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR GCA 90 bp | TATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATACTGCGCCACTAAGCTaGACGAGGACTAGCCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: YFCFKPRNKAGCDPDLGHTAPLS*TRTSRQ Trigger: CTGACGGCTAGTCCTCGTGCAGCTTAGTGGCGCAGT...ATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR GCA 90 bp | TATTTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATAGCAGGCACACTCGCTaGCAGCGTTATCTGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: YFCFKPRNKAGCDPDLGHSRHTR*QRYLQL Trigger: AAGCTGCAGATAACGCTGGCAGCGAGTGTGCCTGCT...ATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS CCA 90 bp | CCAGGGGCCAGCGCAGCTCCCCACTTTCCACAGGGTCCGCCTCGCTaGGCTCCACCACGATTGAGGGCAGCCGCTGGCCCAGCCGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: PGASAAPHFPQGPPR*APPRLRAAAGPAEG Trigger: GCCCTCGGCTGGGCCAGCGGCTGCCCTCAATCGTGGTGGAGCCCAGCGAGGCGGACCCTGTGGAAAGTGGGGAGCTGCGCTGGCCCCTGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS CCA 90 bp | GCAGAGCCCAGCCACGTCCTTGTCCTATCCCCGGGCCGGGGCTGCTaGGTCCTCGGAGCAGGCACACTCGCTGCCAGCGTTATCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: AEPSHVLVLSPGRGC*VLGAGTLAASVICS Trigger: GCTGCAGATAACGCTGGCAGCGAGTGTGCCTGCTCCGAGGACCCAGCAGCCCCGGCCCGGGGATAGGACAAGGACGTGGCTGGGCTCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS GCA 90 bp | GGCTGCTGGGTCCTCGGAGCAGGCACACTCGCTGCCAGCGTTATCTaGAGCTTTCCCTGGTTCTCCGGGCAGACTCGGCGAGGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GCWVLGAGTLAASVI*SFPWFSGQTRRGGS Trigger: GCTGCCCCCTCGCCGAGTCTGCCCGGAGAACCAGGGAAAGCTGCAGATAACGCTGGCAGCGAGTGTGCCTGCTCCGAGGACCCAGCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS GCA 90 bp | ATCCCCGGGCCGGGGCTGCTGGGTCCTCGGAGCAGGCACACTCGCTaGCAGCGTTATCTGCAGCTTTCCCTGGTTCTCCGGGCAGACTCG | + |
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Preference number: 5 (lower is better) Translates to: IPGPGLLGPRSRHTR*QRYLQLSLVLRADS Trigger: CGAGTCTGCCCGGAGAACCAGGGAAAGCTGCAGATAACGCTGGCAGCGAGTGTGCCTGCTCCGAGGACCCAGCAGCCCCGGCCCGGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS GCA 90 bp | ACAGCAGAGCCCAGCCACGTCCTTGTCCTATCCCCGGGCCGGGGCTaGTGGGTCCTCGGAGCAGGCACACTCGCTGCCAGCGTTATCTGC | + |
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Preference number: 5 (lower is better) Translates to: TAEPSHVLVLSPGRG*WVLGAGTLAASVIC Trigger: GCAGATAACGCTGGCAGCGAGTGTGCCTGCTCCGAGGACCCAGCAGCCCCGGCCCGGGGATAGGACAAGGACGTGGCTGGGCTCTGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS CCA 90 bp | CTCGGAGCAGGCACACTCGCTGCCAGCGTTATCTGCAGCTTTCCCTaGTTCTCCGGGCAGACTCGGCGAGGGGGCAGCAGCAGCCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: LGAGTLAASVICSFP*FSGQTRRGGSSSPA Trigger: AGCCGGGCTGCTGCTGCCCCCTCGCCGAGTCTGCCCGGAGAACCAGGGAAAGCTGCAGATAACGCTGGCAGCGAGTGTGCCTGCTCCGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CAA 90 bp | TTCTGCTTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGAGCCCAGCCACGTCCTaGTCCTATCCCCGGGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: FCFKPRNKAGCDPDLGHGSPATS*SYPRAG Trigger: CCCGGCCCGGGGATAGGACAAGGACGTGGCTGGGCT...CCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAAGCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS-3UTR CAA 90 bp | TTCAAACCACGGAACAAAGCGGGGTGTGATCCAGACCTGGGCCATGGGCAGAAGTGGGCTCCACCACGATaGAGGGCAGCCGCTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: FKPRNKAGCDPDLGHGQKWAPPR*RAAAGP Trigger: TGGGCCAGCGGCTGCCCTCAATCGTGGTGGAGCCCA...CTTCTGCCCATGGCCCAGGTCTGGATCACACCCCGCTTTGTTCCGTGGTTTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS GCA 72 bp | CCCAGCCACGTCCTTGTCCTATCCCCGGGCCGGGGCTaGTGGGTCCTCGGAGCAGGCACACTCGCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSHVLVLSPGRG*WVLGAGTLAAS Trigger: GCTGGCAGCGAGTGTGCCTGCTCCGAGGACCCAGCAGCCCCGGCCCGGGGATAGGACAAGGACGTGGCTGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS CCA 72 bp | AGCGCAGCTCCCCACTTTCCACAGGGTCCGCCTCGCTaGGCTCCACCACGATTGAGGGCAGCCGCTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SAAPHFPQGPPR*APPRLRAAAGP Trigger: TGGGCCAGCGGCTGCCCTCAATCGTGGTGGAGCCCAGCGAGGCGGACCCTGTGGAAAGTGGGGAGCTGCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS CCA 72 bp | AGCCACGTCCTTGTCCTATCCCCGGGCCGGGGCTGCTaGGTCCTCGGAGCAGGCACACTCGCTGCCAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: SHVLVLSPGRGC*VLGAGTLAASV Trigger: AACGCTGGCAGCGAGTGTGCCTGCTCCGAGGACCCAGCAGCCCCGGCCCGGGGATAGGACAAGGACGTGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS CAA 72 bp | CCCTCAGCAGTCAGACAGCAGAGCCCAGCCACGTCCTaGTCCTATCCCCGGGCCGGGGCTGCTGGGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PSAVRQQSPATS*SYPRAGAAGSS Trigger: CGAGGACCCAGCAGCCCCGGCCCGGGGATAGGACAAGGACGTGGCTGGGCTCTGCTGTCTGACTGCTGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS CCA 72 bp | GGCACACTCGCTGCCAGCGTTATCTGCAGCTTTCCCTaGTTCTCCGGGCAGACTCGGCGAGGGGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GTLAASVICSFP*FSGQTRRGGSS Trigger: GCTGCTGCCCCCTCGCCGAGTCTGCCCGGAGAACCAGGGAAAGCTGCAGATAACGCTGGCAGCGAGTGTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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| CDS GCA 72 bp | GTCCTCGGAGCAGGCACACTCGCTGCCAGCGTTATCTaGAGCTTTCCCTGGTTCTCCGGGCAGACTCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: VLGAGTLAASVI*SFPWFSGQTRR Trigger: TCGCCGAGTCTGCCCGGAGAACCAGGGAAAGCTGCAGATAACGCTGGCAGCGAGTGTGCCTGCTCCGAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634353.1 |
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