Pregenerated sensors for LBHD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000162194Ensembl transcript IDs: ENST00000354588.7, ENST00000377954.3, ENST00000415855.6, ENST00000431002.6, ENST00000524759.1, ENST00000526490.2, ENST00000527679.5, ENST00000528115.1, ENST00000528862.2, ENST00000532208.5
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATGGGACTTTTGAGAGAAATCCTCCGTGGGCGCCGGACCTTGGCTTaGGCGCAGGAATCCGAGGCAGCCTTTCTCCTTCGTGGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: MGLLREILRGRRTLA*AQESEAAFLLRGPS Trigger: GCTGGGCCCACGAAGGAGAAAGGCTGCCTCGGATTCCTGCGCCCAAGCCAAGGTCCGGCGCCCACGGAGGATTTCTCTCAAAAGTCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528862.2 |
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| CDS CCA 90 bp | GAGAGGGTTGGGCAGCCTGGGACTTTCTGGATGCTGGGAGGAGCCTaGGCTATTTCTAGTCCAAAGCCCATCCTCCTTGCTTCTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ERVGQPGTFWMLGGA*AISSPKPILLASPW Trigger: CCAGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000354588.7 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS CCA 90 bp | CCTCTGTCCCAGAGAGGGTTGGGCAGCCTGGGACTTTCTGGATGCTaGGAGGAGCCTGGGCTATTTCTAGTCCAAAGCCCATCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: PLSQRGLGSLGLSGC*EEPGLFLVQSPSSL Trigger: CAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTCTGGGACAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS GCA 90 bp | TTTCCTCTGTCCCAGAGAGGGTTGGGCAGCCTGGGACTTTCTGGATaGTGGGAGGAGCCTGGGCTATTTCTAGTCCAAAGCCCATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: FPLSQRGLGSLGLSG*WEEPGLFLVQSPSS Trigger: GGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTCTGGGACAGAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS GCA 90 bp | TGTGGGCTCCAAGCCCAGCCTGAATGTGCTGGTGACCTTCAACCTTaGCAATTTTTCCTCTGTCCCAGAGAGGGTTGGGCAGCCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: CGLQAQPECAGDLQP*QFFLCPREGWAAWD Trigger: GTCCCAGGCTGCCCAACCCTCTCTGGGACAGAGGAAAAATTGGCAAGGTTGAAGGTCACCAGCACATTCAGGCTGGGCTTGGAGCCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528115.1 |
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| CDS CCA 90 bp | GCCTGGGCTATTTCTAGTCCAAAGCCCATCCTCCTTGCTTCTCCCTaGCACAAGGGCCATGGTGGTGATTCTGAGATCCAAGCGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: AWAISSPKPILLASP*HKGHGGDSEIQALR Trigger: CCGGAGCGCTTGGATCTCAGAATCACCACCATGGCCCTTGTGCCAGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354588.7 ENST00000527679.5 |
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| CDS CCA 90 bp | GAGAGGGTTGGGCAGCCTGGGACTTTCTGGATGCTGGGAGGAGCCTaGGCTATTTCTAGTCCAAAGCCCATCCTCCTTGCTTCTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: ERVGQPGTFWMLGGA*AISSPKPILLASPH Trigger: ATGGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377954.3 |
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| CDS TCA 90 bp | TGGAGAGGGATGTGTATGTGTGTAGATGCCCTCCATGCGCTGTGTTaGAAACGCGCGGGTGACTGCAGGAAACCACAGAGCACAGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: WRGMCMCVDALHALC*KRAGDCRKPQSTAR Trigger: CCGAGCTGTGCTCTGTGGTTTCCTGCAGTCACCCGCGCGTTTTCAACACAGCGCATGGAGGGCATCTACACACATACACATCCCTCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000377954.3 ENST00000431002.6 ENST00000532208.5 |
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| CDS CCA 90 bp | GGTGACCTTCAACCTTGCCAATTTTTCCTCTGTCCCAGAGAGGGTTaGGCAGCCTGGGACTTTCTGGATGCTGGGAGGAGCCTGGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: GDLQPCQFFLCPREG*AAWDFLDAGRSLGY Trigger: ATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTCTGGGACAGAGGAAAAATTGGCAAGGTTGAAGGTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS TCA 90 bp | GAGGTTGGGCCAAACTGGAGGGTAAGCCAGCTGCCAGACACAGGCTaGGGAAGTACTAACCTGAATGTGCTGGTGACCTTCAACCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: EVGPNWRVSQLPDTG*GSTNLNVLVTFNLA Trigger: GGCAAGGTTGAAGGTCACCAGCACATTCAGGTTAGTACTTCCTCAGCCTGTGTCTGGCAGCTGGCTTACCCTCCAGTTTGGCCCAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431002.6 |
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| CDS TCA 90 bp | CCTGGCACAAGGGCCATGGTGGTGATTCTTAGAGTGCAAGATGATTaGACTCAGAGGAGAGTACTGCTGCCCAGTGCACCCCACAAACTG | + |
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Preference number: 5 (lower is better) Translates to: PGTRAMVVILRVQDD*TQRRVLLPSAPHKL Trigger: CAGTTTGTGGGGTGCACTGGGCAGCAGTACTCTCCTCTGAGTTCAATCATCTTGCACTCTAAGAATCACCACCATGGCCCTTGTGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000431002.6 ENST00000526490.2 ENST00000532208.5 |
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| CDS CCA 90 bp | TCTTCCTCACCATCAGTGAGCAGCAGCAGCTCCTCATGGGGCAAATaGAGATCCCCACTCTCTTCATTCACCTCACTGGATTCCACCACA | + |
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Preference number: 5 (lower is better) Translates to: SSSPSVSSSSSSWGK*RSPLSSFTSLDSTT Trigger: TGTGGTGGAATCCAGTGAGGTGAATGAAGAGAGTGGGGATCTCCATTTGCCCCATGAGGAGCTGCTGCTGCTCACTGATGGTGAGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528862.2 ENST00000532208.5 |
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| CDS CCA 90 bp | CCTGGAGACACTGGGATGGCAACAAGGGTAGGAGACAAGGGCACCTaGATTAAAGCCCTGTGGGCCAAGAGTTGTGATAACCAACTTGGA | + |
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Preference number: 5 (lower is better) Translates to: PGDTGMATRVGDKGT*IKALWAKSCDNQLG Trigger: TCCAAGTTGGTTATCACAACTCTTGGCCCACAGGGCTTTAATCCAGGTGCCCTTGTCTCCTACCCTTGTTGCCATCCCAGTGTCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431002.6 ENST00000526490.2 |
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| CDS CCA 90 bp | CCACTTCTACAAACACGGGAGCCTGTTGAGTCCCAGAAGGGACAGTaGTTGGTGGCTTCCAGACATGCTGTGTCCTCAAGAATCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: PLLQTREPVESQKGQ*LVASRHAVSSRIQQ Trigger: TTGTTGGATTCTTGAGGACACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTGTTTGTAGAAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS TCA 90 bp | ATGGGAATATTCCACAAAGCCACTTCTACAAACACGGGAGCCTGTTaGGTCCCAGAAGGGACAGTGGTTGGTGGCTTCCAGACATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: MGIFHKATSTNTGAC*VPEGTVVGGFQTCC Trigger: ACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTGTTTGTAGAAGTGGCTTTGTGGAATATTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS TCA 90 bp | AAAGCCCATCCTCCTTGCTTCTCCCTGGCACAAGGGCCATGGTGGTaGTTCTTAGAGTGCAAGATGATTGAACTCAGAGGAGAGTACTGC | + |
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Preference number: 5 (lower is better) Translates to: KAHPPCFSLAQGPWW*FLECKMIELRGEYC Trigger: GCAGTACTCTCCTCTGAGTTCAATCATCTTGCACTCTAAGAATCACCACCATGGCCCTTGTGCCAGGGAGAAGCAAGGAGGATGGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000431002.6 ENST00000526490.2 ENST00000532208.5 |
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| CDS CCA 90 bp | TACAAACACGGGAGCCTGTTGAGTCCCAGAAGGGACAGTGGTTGGTaGCTTCCAGACATGCTGTGTCCTCAAGAATCCAACAAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: YKHGSLLSPRRDSGW*LPDMLCPQESNKHL Trigger: AAGATGCTTGTTGGATTCTTGAGGACACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTGTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS CCA 90 bp | TTCTACAAACACGGGAGCCTGTTGAGTCCCAGAAGGGACAGTGGTTaGTGGCTTCCAGACATGCTGTGTCCTCAAGAATCCAACAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: FYKHGSLLSPRRDSG*WLPDMLCPQESNKH Trigger: ATGCTTGTTGGATTCTTGAGGACACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTGTTTGTAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS GCA 90 bp | GCTGTGTCCTCAAGAATCCAACAAGCATCTTCTTCATCCTGGTCCTaGCCCCAGCTGAGTCCAGCGTTAAATGTTCTTAAAGGACTTCTA | + |
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Preference number: 5 (lower is better) Translates to: AVSSRIQQASSSSWS*PQLSPALNVLKGLL Trigger: TAGAAGTCCTTTAAGAACATTTAACGCTGGACTCAGCTGGGGGCAGGACCAGGATGAAGAAGATGCTTGTTGGATTCTTGAGGACACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS CCA 90 bp | ACAGCTTCTTCTTCAGCTCCCTCAAAGCTATTAGGAGGCAGGAGATaGGAATATTCCACAAAGCCACTTCTACAAACACGGGAGCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: TASSSAPSKLLGGRR*EYSTKPLLQTREPV Trigger: AACAGGCTCCCGTGTTTGTAGAAGTGGCTTTGTGGAATATTCCCATCTCCTGCCTCCTAATAGCTTTGAGGGAGCTGAAGAAGAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000532208.5 |
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| CDS CCA 90 bp | GGGAGGGAACAATACTTACCCTCAAAGCTATTAGGAGGCAGGAGATaGGAATATTCCACAAAGCCACTTCTACAAACACGGGAGCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GREQYLPSKLLGGRR*EYSTKPLLQTREPV Trigger: AACAGGCTCCCGTGTTTGTAGAAGTGGCTTTGTGGAATATTCCCATCTCCTGCCTCCTAATAGCTTTGAGGGTAAGTATTGTTCCCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 |
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| CDS TCA 90 bp | AAAGCCCTGTGGGCCAAGAGTTGTGATAACCAACTTGGAATTTCCTaGCTCCTATGCTTACTGATTTTTCCCAACCTGGTATGTTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: KALWAKSCDNQLGIS*LLCLLIFPNLVCLY Trigger: ATACAAACATACCAGGTTGGGAAAAATCAGTAAGCATAGGAGTCAGGAAATTCCAAGTTGGTTATCACAACTCTTGGCCCACAGGGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000431002.6 ENST00000526490.2 |
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| CDS GCA 72 bp | TCGTGGGCCCAGCGGAGAGTCCGGACCGAGATACCATaGCAGGACTCTCCGGGGTCCTGTGAGCTGCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: SWAQRRVRTEIP*QDSPGSCELPS Trigger: CGACGGCAGCTCACAGGACCCCGGAGAGTCCTGGCATGGTATCTCGGTCCGGACTCTCCGCTGGGCCCACGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528862.2 |
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| CDS CAA 72 bp | CCGGAATTGAGGACACAGGGTCCCCGCGCTCAGCCCTaGGTGCCAGCACTTCTTGGACACCTCAACCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PELRTQGPRAQP*VPALLGHLNPL Trigger: GAGGGGGTTGAGGTGTCCAAGAAGTGCTGGCACCAAGGGCTGAGCGCGGGGACCCTGTGTCCTCAATTCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431002.6 |
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| CDS CAA 90 bp | GATGGGACTTTTGAGAGAAATCCTCCGTGGGCGCCGGACCTTGGCTaGGGCGCAGGAATCCGAGGCAGCCTTTCTCCTTCGTGGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DGTFERNPPWAPDLG*GAGIRGSLSPSWAQ Trigger: CTGGGCCCACGAAGGAGAAAGGCTGCCTCGGATTCCTGCGCCCAAGCCAAGGTCCGGCGCCCACGGAGGATTTCTCTCAAAAGTCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528862.2 |
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| CDS TCA 72 bp | AGATGCCCTCCATGCGCTGTGTTGAAAACGCGCGGGTaGCTGCAGGAAACCACAGAGCACAGCTCGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RCPPCAVLKTRG*LQETTEHSSGL Trigger: GAGGCCCGAGCTGTGCTCTGTGGTTTCCTGCAGTCACCCGCGCGTTTTCAACACAGCGCATGGAGGGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377954.3 ENST00000431002.6 ENST00000532208.5 |
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| CDS CCA 72 bp | TTGAGAGAAATCCTCCGTGGGCGCCGGACCTTGGCTTaGGCGCAGGAATCCGAGGCAGCCTTTCTCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: LREILRGRRTLA*AQESEAAFLLR Trigger: ACGAAGGAGAAAGGCTGCCTCGGATTCCTGCGCCCAAGCCAAGGTCCGGCGCCCACGGAGGATTTCTCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528862.2 |
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| CDS CAA 72 bp | TTTGAGAGAAATCCTCCGTGGGCGCCGGACCTTGGCTaGGGCGCAGGAATCCGAGGCAGCCTTTCTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: FERNPPWAPDLG*GAGIRGSLSPS Trigger: CGAAGGAGAAAGGCTGCCTCGGATTCCTGCGCCCAAGCCAAGGTCCGGCGCCCACGGAGGATTTCTCTCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528862.2 |
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| CDS CAA 72 bp | GGACTTTTGAGAGAAATCCTCCGTGGGCGCCGGACCTaGGCTTGGGCGCAGGAATCCGAGGCAGCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GLLREILRGRRT*AWAQESEAAFL Trigger: GAGAAAGGCTGCCTCGGATTCCTGCGCCCAAGCCAAGGTCCGGCGCCCACGGAGGATTTCTCTCAAAAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528862.2 |
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| CDS GCA 72 bp | TCCCAGAGAGGGTTGGGCAGCCTGGGACTTTCTGGATaGTGGGAGGAGCCTGGGCTATTTCTAGTCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SQRGLGSLGLSG*WEEPGLFLVQS Trigger: GCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS CCA 72 bp | CAGAGAGGGTTGGGCAGCCTGGGACTTTCTGGATGCTaGGAGGAGCCTGGGCTATTTCTAGTCCAAAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QRGLGSLGLSGC*EEPGLFLVQSP Trigger: TGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS CAA 90 bp | TGCTGGGAGGAGCCTGGGCTATTTCTAGTCCAAAGCCCATCCTCCTaGCTTCTCCCTGGCACAAGGGCCATGGTGGTGATTCTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: CWEEPGLFLVQSPSS*LLPGTRAMVVILRS Trigger: GGATCTCAGAATCACCACCATGGCCCTTGTGCCAGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354588.7 ENST00000527679.5 |
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| CDS CCA 72 bp | CAATTTTTCCTCTGTCCCAGAGAGGGTTGGGCAGCCTaGGACTTTCTGGATGCTGGGAGGAGCCTGGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: QFFLCPREGWAA*DFLDAGRSLGY Trigger: ATAGCCCAGGCTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTCTGGGACAGAGGAAAAATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS CCA 72 bp | CACGGGAGCCTGTTGAGTCCCAGAAGGGACAGTGGTTaGTGGCTTCCAGACATGCTGTGTCCTCAAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: HGSLLSPRRDSG*WLPDMLCPQES Trigger: GGATTCTTGAGGACACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS CAA 90 bp | TGCTGGGAGGAGCCTGGGCTATTTCTAGTCCAAAGCCCATCCTCCTaGCTTCTCCCTGGCACAAGGGCCATGGTGGTGATTCTTAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: CWEEPGLFLVQSPSS*LLPGTRAMVVILRV Trigger: CACTCTAAGAATCACCACCATGGCCCTTGTGCCAGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000431002.6 ENST00000526490.2 ENST00000532208.5 |
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| CDS CCA 72 bp | CAAACACGGGAGCCTGTTGAGTCCCAGAAGGGACAGTaGTTGGTGGCTTCCAGACATGCTGTGTCCTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: QTREPVESQKGQ*LVASRHAVSSR Trigger: TCTTGAGGACACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS CAA 72 bp | GAGCCTGGGCTATTTCTAGTCCAAAGCCCATCCTCCTaGCTTCTCCCTGGCACAAGGGCCATGGTGGTGATT | + |
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Preference number: 6 (lower is better) Translates to: EPGLFLVQSPSS*LLPGTRAMVVI Trigger: AATCACCACCATGGCCCTTGTGCCAGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000354588.7 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS CAA 72 bp | TCAACCTTGCCAATTTTTCCTCTGTCCCAGAGAGGGTaGGGCAGCCTGGGACTTTCTGGATGCTGGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: STLPIFPLSQRG*GSLGLSGCWEE Trigger: CTCCTCCCAGCATCCAGAAAGTCCCAGGCTGCCCAACCCTCTCTGGGACAGAGGAAAAATTGGCAAGGTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000532208.5 |
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| CDS TCA 72 bp | ATGTGTATGTGTGTAGATGCCCTCCATGCGCTGTGTTaGAAACGCGCGGGTGACTGCAGGAAACCACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: MCMCVDALHALC*KRAGDCRKPQS Trigger: GCTCTGTGGTTTCCTGCAGTCACCCGCGCGTTTTCAACACAGCGCATGGAGGGCATCTACACACATACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000377954.3 ENST00000431002.6 ENST00000532208.5 |
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| CDS TCA 72 bp | CTGCAGGAAACCACAGAGCACAGCTCGGGCCTCTACTaGTCGGGAAACGTCGGAAGACAGAAAAATGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LQETTEHSSGLY*SGNVGRQKNGQ Trigger: TTGCCCATTTTTCTGTCTTCCGACGTTTCCCGATCAGTAGAGGCCCGAGCTGTGCTCTGTGGTTTCCTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000431002.6 ENST00000532208.5 |
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| CDS GCA 72 bp | CAAGCCCAGCCTGAATGTGCTGGTGACCTTCAACCTTaGCAATTTTTCCTCTGTCCCAGAGAGGGTTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QAQPECAGDLQP*QFFLCPREGWA Trigger: TGCCCAACCCTCTCTGGGACAGAGGAAAAATTGGCAAGGTTGAAGGTCACCAGCACATTCAGGCTGGGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528115.1 |
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| CDS CCA 72 bp | CCATCAGTGAGCAGCAGCAGCTCCTCATGGGGCAAATaGAGATCCCCACTCTCTTCATTCACCTCACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PSVSSSSSSWGK*RSPLSSFTSLD Trigger: ATCCAGTGAGGTGAATGAAGAGAGTGGGGATCTCCATTTGCCCCATGAGGAGCTGCTGCTGCTCACTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000354588.7 ENST00000377954.3 ENST00000415855.6 ENST00000431002.6 ENST00000526490.2 ENST00000527679.5 ENST00000528862.2 ENST00000532208.5 |
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| CDS TCA 72 bp | AGGGCCATGGTGGTGATTCTTAGAGTGCAAGATGATTaGACTCAGAGGAGAGTACTGCTGCCCAGTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RAMVVILRVQDD*TQRRVLLPSAP Trigger: GGGTGCACTGGGCAGCAGTACTCTCCTCTGAGTTCAATCATCTTGCACTCTAAGAATCACCACCATGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000431002.6 ENST00000526490.2 ENST00000532208.5 |
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| CDS CCA 72 bp | ACTGGGATGGCAACAAGGGTAGGAGACAAGGGCACCTaGATTAAAGCCCTGTGGGCCAAGAGTTGTGATAAC | + |
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Preference number: 6 (lower is better) Translates to: TGMATRVGDKGT*IKALWAKSCDN Trigger: GTTATCACAACTCTTGGCCCACAGGGCTTTAATCCAGGTGCCCTTGTCTCCTACCCTTGTTGCCATCCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431002.6 ENST00000526490.2 |
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| CDS CAA 72 bp | ATTCCACAAAGCCACTTCTACAAACACGGGAGCCTGTaGAGTCCCAGAAGGGACAGTGGTTGGTGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: IPQSHFYKHGSL*SPRRDSGWWLP Trigger: TGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTGTTTGTAGAAGTGGCTTTGTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS CAA 90 bp | GATGGGAATATTCCACAAAGCCACTTCTACAAACACGGGAGCCTGTaGAGTCCCAGAAGGGACAGTGGTTGGTGGCTTCCAGACATGCTG | + |
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Preference number: 6 (lower is better) Translates to: DGNIPQSHFYKHGSL*SPRRDSGWWLPDML Trigger: CAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGTGTTTGTAGAAGTGGCTTTGTGGAATATTCCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000532208.5 |
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| CDS CAA 90 bp | ATTCACCTCACTGGATTCCACCACAATAGACGGCAGATGGGACTTTaGAGAGAAATCCTGAATAGGGACAGCAGGGAGGTTGGGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: IHLTGFHHNRRQMGL*REILNRDSREVGPN Trigger: GTTTGGCCCAACCTCCCTGCTGTCCCTATTCAGGATTTCTCTCAAAAGTCCCATCTGCCGTCTATTGTGGTGGAATCCAGTGAGGTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431002.6 |
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| CDS CCA 72 bp | ATAGGATCTTTATTTCTACTTACTCCCTGGAGACACTaGGATGGCAACAAGGGTAGGAGACAAGGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: IGSLFLLTPWRH*DGNKGRRQGHL Trigger: CAGGTGCCCTTGTCTCCTACCCTTGTTGCCATCCCAGTGTCTCCAGGGAGTAAGTAGAAATAAAGATCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431002.6 ENST00000526490.2 |
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| CDS CAA 72 bp | ACTGGATTCCACCACAATAGACGGCAGATGGGACTTTaGAGAGAAATCCTGAATAGGGACAGCAGGGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TGFHHNRRQMGL*REILNRDSREV Trigger: AACCTCCCTGCTGTCCCTATTCAGGATTTCTCTCAAAAGTCCCATCTGCCGTCTATTGTGGTGGAATCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431002.6 |
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| CDS GCA 72 bp | GAGTGCAAGATGATTGAACTCAGAGGAGAGTACTGCTaGCCAGTGCACCCCACAAACTGTTCCTTTAATCTT | + |
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Preference number: 6 (lower is better) Translates to: ECKMIELRGEYC*PVHPTNCSFNL Trigger: AAGATTAAAGGAACAGTTTGTGGGGTGCACTGGGCAGCAGTACTCTCCTCTGAGTTCAATCATCTTGCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000431002.6 ENST00000526490.2 ENST00000532208.5 |
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| CDS GCA 72 bp | TCAAGAATCCAACAAGCATCTTCTTCATCCTGGTCCTaGCCCCAGCTGAGTCCAGCGTTAAATGTTCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SRIQQASSSSWS*PQLSPALNVLK Trigger: TTTAAGAACATTTAACGCTGGACTCAGCTGGGGGCAGGACCAGGATGAAGAAGATGCTTGTTGGATTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000354588.7 ENST00000415855.6 ENST00000431002.6 ENST00000524759.1 ENST00000526490.2 ENST00000527679.5 ENST00000528115.1 ENST00000528862.2 ENST00000532208.5 |
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| CDS GCA 72 bp | TTAGAGTGCAAGATGATTGAACTCAGAGGAGAGTACTaGTGCCCAGTGCACCCCACAAACTGTTCCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LECKMIELRGEY*CPVHPTNCSFN Trigger: ATTAAAGGAACAGTTTGTGGGGTGCACTGGGCAGCAGTACTCTCCTCTGAGTTCAATCATCTTGCACTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000431002.6 ENST00000526490.2 ENST00000532208.5 |
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| CDS CAA 90 bp | GTGCTAAGCGATTATACGCCATTTCTCCAACCAGTATACTTGACTTaGAGTGTTTGTTCCAGAGTTGAGGGGATGGAGAGGGATGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: VLSDYTPFLQPVYLT*SVCSRVEGMERDVY Trigger: ATACACATCCCTCTCCATCCCCTCAACTCTGGAACAAACACTCAAAGTCAAGTATACTGGTTGGAGAAATGGCGTATAATCGCTTAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532208.5 |
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| CDS CAA 72 bp | GATTATACGCCATTTCTCCAACCAGTATACTTGACTTaGAGTGTTTGTTCCAGAGTTGAGGGGATGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DYTPFLQPVYLT*SVCSRVEGMER Trigger: CCTCTCCATCCCCTCAACTCTGGAACAAACACTCAAAGTCAAGTATACTGGTTGGAGAAATGGCGTATAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532208.5 |
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| CDS CAA 72 bp | AACTATTACCCATTTCTCCAACCAGTATACTTGACTTaGAGTGTTTGTTCCAGAGTTGAGGGGATGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: NYYPFLQPVYLT*SVCSRVEGMER Trigger: CCTCTCCATCCCCTCAACTCTGGAACAAACACTCAAAGTCAAGTATACTGGTTGGAGAAATGGGTAATAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431002.6 |
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| CDS CAA 90 bp | AAGATAAGTAACTATTACCCATTTCTCCAACCAGTATACTTGACTTaGAGTGTTTGTTCCAGAGTTGAGGGGATGGAGAGGGATGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: KISNYYPFLQPVYLT*SVCSRVEGMERDVY Trigger: ATACACATCCCTCTCCATCCCCTCAACTCTGGAACAAACACTCAAAGTCAAGTATACTGGTTGGAGAAATGGGTAATAGTTACTTATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431002.6 |
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| CDS CAA 90 bp | ATGTTAAAGATAAGTAACTATTACCCATTTCTCCAACCAGTATACTaGACTTTGAGTGTTTGTTCCAGAGTTGAGGGGATGGAGAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: MLKISNYYPFLQPVY*TLSVCSRVEGMERD Trigger: ATCCCTCTCCATCCCCTCAACTCTGGAACAAACACTCAAAGTCAAGTATACTGGTTGGAGAAATGGGTAATAGTTACTTATCTTTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431002.6 |
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