RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LBH (Homo sapiens)

Ensembl gene IDs: ENSG00000213626

Ensembl transcript IDs: ENST00000395323.9, ENST00000401506.1, ENST00000404397.5, ENST00000406087.5, ENST00000407930.2, ENST00000412933.5, ENST00000464412.5, ENST00000467242.1, ENST00000484150.1

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGGCAGACAACAGAGGGAGGAAGCAAGGGGTGCCGGCGACCATTaGCTTCCCAGAACGGAATTCCGCGGACTGCTGTGTCCACAGCGC +
Preference number: 1 (lower is better)
Translates to: TGRQQREEARGAGDH*LPRTEFRGLLCPQR
Trigger: GCGCTGTGGACACAGCAGTCCGCGGAATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACCCCTTGCTTCCTCCCTCTGTTGTCTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 90 bp ACGAAGCGGGGAGCAAGAGAGAGGAAAGCCCCTCTCGGTGCAGGCTaGCGGCCTCTCCCACTTCTGCGAGGAGTTGGAAGAAGTTATTGC +
Preference number: 1 (lower is better)
Translates to: TKRGARERKAPLGAG*RPLPLLRGVGRSYC
Trigger: GCAATAACTTCTTCCAACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCTCTCTCTTGCTCCCCGCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 90 bp AAACAGAACGAAGCGGGGAGCAAGAGAGAGGAAAGCCCCTCTCGGTaGAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTGGAAGAAG +
Preference number: 1 (lower is better)
Translates to: KQNEAGSKREESPSR*RLPASPTSARSWKK
Trigger: CTTCTTCCAACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCTCTCTCTTGCTCCCCGCTTCGTTCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 90 bp CATGCTGCGTGCCTTGGTTGGCCGAGTTTAGCTCAAGGAAGGCTCTaGGTCCACCTCTTGGCCACACGGTACTGCTCTCGGCGGACTGAA +
Preference number: 1 (lower is better)
Translates to: HAACLGWPSLAQGRL*VHLLATRYCSRRTE
Trigger: TTCAGTCCGCCGAGAGCAGTACCGTGTGGCCAAGAGGTGGACTCAGAGCCTTCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 90 bp CAGCAGGCTCCACCGCTGAGGGTCCTGACATTAGCTGTCAGCCCCTaGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGTCTAGGGAC +
Preference number: 1 (lower is better)
Translates to: QQAPPLRVLTLAVSP*PAQTANGHTKWSRD
Trigger: GTCCCTAGACCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGACCCTCAGCGGTGGAGCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 90 bp GAGCAAGTCTTGGAAGGGCAGCAGTTAAGGGAGAGACCTTCGTGCTaGGTGTCCACCCTGGGGCTTCCAACAAGGGCAGGAAGTGCTCTC +
Preference number: 1 (lower is better)
Translates to: EQVLEGQQLRERPSC*VSTLGLPTRAGSAL
Trigger: GAGAGCACTTCCTGCCCTTGTTGGAAGCCCCAGGGTGGACACTCAGCACGAAGGTCTCTCCCTTAACTGCTGCCCTTCCAAGACTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 90 bp GCTCTGAGTCCACCTCTTGGCCACACGGTACTGCTCTCGGCGGACTaGAGCATTTGTCCTGCAACCTGCTGCTTCAGATGGCTCTTAGCT +
Preference number: 1 (lower is better)
Translates to: ALSPPLGHTVLLSAD*SICPATCCFRWLLA
Trigger: AGCTAAGAGCCATCTGAAGCAGCAGGTTGCAGGACAAATGCTTCAGTCCGCCGAGAGCAGTACCGTGTGGCCAAGAGGTGGACTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 90 bp TCAACCTGGACTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTaGTTGGCCGAGTTTAGCTCAAGGAAGGCTCTGAGTCCACCTCTT +
Preference number: 1 (lower is better)
Translates to: STWTDWRPEGTCCVP*LAEFSSRKALSPPL
Trigger: AAGAGGTGGACTCAGAGCCTTCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCAGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 90 bp CCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTaGAAGAAGTTATTGCCATTGATGTGTGTCACACAGGCAGACAAC +
Preference number: 1 (lower is better)
Translates to: PSRCRLPASPTSARS*KKLLPLMCVTQADN
Trigger: GTTGTCTGCCTGTGTGACACACATCAATGGCAATAACTTCTTCCAACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 90 bp AGAGGAAAGCCCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTaGGAGGAGTTGGAAGAAGTTATTGCCATTGATGTGTGTCACACA +
Preference number: 1 (lower is better)
Translates to: RGKPLSVQAAGLSHF*EELEEVIAIDVCHT
Trigger: TGTGTGACACACATCAATGGCAATAACTTCTTCCAACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 90 bp AGGCAGGGGCTGGGCAGGTTGGCCCTATGTGGTCCCATCTCACTCTaGGAACCTCATGTACAAGGCTGTGACTCAACGTTTTCTTCATGG +
Preference number: 1 (lower is better)
Translates to: RQGLGRLALCGPISL*EPHVQGCDSTFSSW
Trigger: CCATGAAGAAAACGTTGAGTCACAGCCTTGTACATGAGGTTCTCAGAGTGAGATGGGACCACATAGGGCCAACCTGCCCAGCCCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR GCA 90 bp CCTGCACTTCACCTCCAGCTGGCTTTGCAGGCAGCCAATTGCTCCTaGTCTCCTTTACTCTCCTCCCTGTCATATAGACCAACACACCTG +
Preference number: 1 (lower is better)
Translates to: PALHLQLALQAANCS*SPLLSSLSYRPTHL
Trigger: CAGGTGTGTTGGTCTATATGACAGGGAGGAGAGTAAAGGAGAGCAGGAGCAATTGGCTGCCTGCAAAGCCAGCTGGAGGTGAAGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 90 bp AGGTCCCTTGCCATGCCTCCCTTCTGCCCTTGTCCGGGAACAACATaGGGAGAAGCCAGGGATCTCATGACATCCTTTAGTCTCAAACTC +
Preference number: 1 (lower is better)
Translates to: RSLAMPPFCPCPGTT*GEARDLMTSFSLKL
Trigger: GAGTTTGAGACTAAAGGATGTCATGAGATCCCTGGCTTCTCCCCATGTTGTTCCCGGACAAGGGCAGAAGGGAGGCATGGCAAGGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 90 bp TCTGCCCTTGTCCGGGAACAACATGGGGAGAAGCCAGGGATCTCATaGCATCCTTTAGTCTCAAACTCGATCCCAAGGTTGCCACGACAG +
Preference number: 1 (lower is better)
Translates to: SALVREQHGEKPGIS*HPLVSNSIPRLPRQ
Trigger: CTGTCGTGGCAACCTTGGGATCGAGTTTGAGACTAAAGGATGTCATGAGATCCCTGGCTTCTCCCCATGTTGTTCCCGGACAAGGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 90 bp CTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTaGAGCAGCGGTCAAAATCTGACGGGTCTGGGAAGATCTGTAATC +
Preference number: 1 (lower is better)
Translates to: LLWVPPLWRADGPSV*SSGQNLTGLGRSVI
Trigger: GATTACAGATCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
3UTR GCA 90 bp CTCTACTGCTCTTTATTTTCTTTCGCTGTCTCTTCGCAGTTATCTTaGTCATCCTCCTGGACCAGGAACTCCTCAGGGGGCCACCGGAGC +
Preference number: 1 (lower is better)
Translates to: LYCSLFSFAVSSQLS*SSSWTRNSSGGHRS
Trigger: GCTCCGGTGGCCCCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGCGAAAGAAAATAAAGAGCAGTAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406087.5
3UTR GCA 90 bp TCCTTTCCTGCACTTCACCTCCAGCTGGCTTTGCAGGCAGCCAATTaGTCCTGCTCTCCTTTACTCTCCTCCCTGTCATATAGACCAACA +
Preference number: 1 (lower is better)
Translates to: SFPALHLQLALQAAN*SCSPLLSSLSYRPT
Trigger: TGTTGGTCTATATGACAGGGAGGAGAGTAAAGGAGAGCAGGAGCAATTGGCTGCCTGCAAAGCCAGCTGGAGGTGAAGTGCAGGAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 90 bp CATGTTTGTTTTCTTACCCCAAATGTTCCTTGCTTGCTTTGCACATaGCCCACCTCCCACCCACCAAGACCCATTGGAATCCCACCACTG +
Preference number: 1 (lower is better)
Translates to: HVCFLTPNVPCLLCT*PTSHPPRPIGIPPL
Trigger: CAGTGGTGGGATTCCAATGGGTCTTGGTGGGTGGGAGGTGGGGCATGTGCAAAGCAAGCAAGGAACATTTGGGGTAAGAAAACAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 90 bp CAAGGCTGTGACTCAACGTTTTCTTCATGGCTGAGAGGTGCTAATTaGTTCACACGCTGTTTTCCAAGATGTGAGCTGGGAAGGGCTAGC +
Preference number: 1 (lower is better)
Translates to: QGCDSTFSSWLRGAN*FTRCFPRCELGRAS
Trigger: GCTAGCCCTTCCCAGCTCACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCATGAAGAAAACGTTGAGTCACAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR TCA 90 bp GAGAACCTCATGTACAAGGCTGTGACTCAACGTTTTCTTCATGGCTaGGAGGTGCTAATTGGTTCACACGCTGTTTTCCAAGATGTGAGC +
Preference number: 1 (lower is better)
Translates to: ENLMYKAVTQRFLHG*EVLIGSHAVFQDVS
Trigger: GCTCACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCATGAAGAAAACGTTGAGTCACAGCCTTGTACATGAGGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR TCA 90 bp AAGACTTTGTTTTCTGATGTCCCAGCAGCCAGAGTGAATGTCTGCTaGGCGCATCCTGGCTGCAGTTCTCTGCTCAATGTTTTCTTAAAA +
Preference number: 1 (lower is better)
Translates to: KTLFSDVPAARVNVC*AHPGCSSLLNVFLK
Trigger: TTTTAAGAAAACATTGAGCAGAGAACTGCAGCCAGGATGCGCTCAGCAGACATTCACTCTGGCTGCTGGGACATCAGAAAACAAAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CCA 90 bp AGGAAAGCCCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTCGTGAGTACTGCAGCTaGGCAGACTGGCGGGAATCC +
Preference number: 2 (lower is better)
Translates to: RKAPLGAGCRPLPLLRGVREYCS*ADWRES
Trigger: GGATTCCCGCCAGTCTGCCCAGCTGCAGTACTCACG...AACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CCA 90 bp AGGAAAGCCCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTCTGCTGAGCGCATCCTaGCTGCAGTTCTCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: RKAPLGAGCRPLPLLRGVLLSAS*LQFSAQ
Trigger: TTGAGCAGAGAACTGCAGCCAGGATGCGCTCAGCAG...AACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CCA 90 bp AGGAAAGCCCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTTCAACCTGGACTGACTaGAGACCTGAGGGGACATGC +
Preference number: 2 (lower is better)
Translates to: RKAPLGAGCRPLPLLRGVSTWTD*RPEGTC
Trigger: GCATGTCCCCTCAGGTCTCCAGTCAGTCCAGGTTGA...AACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 90 bp ACCTGGACTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTaGGCCGAGTTTAGCTCAAGGAAGGCTCTGAGTCCACCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: TWTDWRPEGTCCVPW*AEFSSRKALSPPLG
Trigger: GCCAAGAGGTGGACTCAGAGCCTTCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR TCA 90 bp TGGACTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTAGAGTGAATGTCTGCTaGGCGCATCCTGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: WTDWRPEGTCCVPWLAEFRVNVC*AHPGCS
Trigger: ACTGCAGCCAGGATGCGCTCAGCAGACATTCACTCT...AAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR GCA 90 bp AGGAAAGCCCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTCAAATGTTCCTTGCTTaGTTTGCACATGCCCCACCT +
Preference number: 2 (lower is better)
Translates to: RKAPLGAGCRPLPLLRGVQMFLA*FAHAPP
Trigger: AGGTGGGGCATGTGCAAAGCAAGCAAGGAACATTTG...AACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR TCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACATCCCAGCAGCCAGAGTaGATGTCTGCTGAGCGCATC +
Preference number: 2 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTSQQPE*MSAERI
Trigger: GATGCGCTCAGCAGACATTCACTCTGGCTGCTGGGA...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR GCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAACTCGATCCCAAGGTTaGCACGACAGCCTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTTRSQG*HDSLVP
Trigger: GGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGT...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR GCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAGCCTTGTCCCCACCATaGAAGTCACCTCCCCAACAA +
Preference number: 2 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTALSPP*KSPPQQ
Trigger: TTGTTGGGGAGGTGACTTGCATGGTGGGGACAAGGC...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR TCA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGTCTCTTCTTCCGTCATaGTGGGAAAAACACAGTTCA +
Preference number: 2 (lower is better)
Translates to: NRPRSPMGREYCSWADWRSLLPS*WEKHSS
Trigger: TGAACTGTGTTTTTCCCATCATGACGGAAGAAGAGA...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR TCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACACCAACACACCTGAAATaGAAGCAAAGGGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTPTHLK*KQRVGW
Trigger: CCACCCCACCCTTTGCTTTCATTTCAGGTGTGTTGG...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR GCA 90 bp CTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTAGCTTCGGTGATCTGCAGGTaGAAAACAGAAGCCTCGTTT +
Preference number: 2 (lower is better)
Translates to: LTGDLRGHAACLGWPSLASVICR*KTEASF
Trigger: AAACGAGGCTTCTGTTTTGCACCTGCAGATCACCGA...AGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 90 bp TCCACCTCTTGGCCACACGGTACTGCTCTCGGCGGACTGAAGCATTaGTCCTGCAACCTGCTGCTTCAGATGGCTCTTAGCTACAATAAG +
Preference number: 2 (lower is better)
Translates to: STSWPHGTALGGLKH*SCNLLLQMALSYNK
Trigger: CTTATTGTAGCTAAGAGCCATCTGAAGCAGCAGGTTGCAGGACAAATGCTTCAGTCCGCCGAGAGCAGTACCGTGTGGCCAAGAGGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 90 bp CCTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTaGCAGCAGCGGTCAAAATCTGACGGGTCTGGGAAGATCTGTAAT +
Preference number: 2 (lower is better)
Translates to: PSVGSTTMEGRRSFS*QQRSKSDGSGKICN
Trigger: ATTACAGATCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
3UTR-3UTR GCA 90 bp CCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGTCTAGGGACCAGCAAACCCCAAATGTTCCTTaGTTGCTTTGCACATGCCCC +
Preference number: 2 (lower is better)
Translates to: PWPAQTANGHTKWSRDQQTPNVP*LLCTCP
Trigger: GGGGCATGTGCAAAGCAAGCAAGGAACATTTGGGGT...TTGCTGGTCCCTAGACCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAGGCCATGGAGTAGAATaGGGTGACCTTTCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTGHGVE*GDLSFP
Trigger: AGGAAAGGAAAGGTCACCCCATTCTACTCCATGGCC...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CCA 90 bp GTATGGATGAACCACTCTCTGCAGCCAAAACAGAACGAAGCGGGGAGCAAGAGATCTGAGTCCACCTCTTaGCCACACGGTACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: VWMNHSLQPKQNEAGSKRSESTS*PHGTAL
Trigger: GAGAGCAGTACCGTGTGGCCAAGAGGTGGACTCAGA...TCTCTTGCTCCCCGCTTCGTTCTGTTTTGGCTGCAGAGAGTGGTTCATCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 90 bp ACTCTACTGCTCTTTATTTTCTTTCGCTGTCTCTTCGCAGTTATCTaGCTCATCCTCCTGGACCAGGAACTCCTCAGGGGGCCACCGGAG +
Preference number: 2 (lower is better)
Translates to: TLLLFIFFRCLFAVI*LILLDQELLRGPPE
Trigger: CTCCGGTGGCCCCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGCGAAAGAAAATAAAGAGCAGTAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406087.5
3UTR-3UTR TCA 90 bp CCTCCCCTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCTCCTGGCTAACATGGTaGAACCTCTCATATGGTAAA +
Preference number: 2 (lower is better)
Translates to: PPLLWVPPLWRADGPSVCSWLTW*NLSYGK
Trigger: TTTACCATATGAGAGGTTTCACCATGTTAGCCAGGA...GCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
3UTR-3UTR GCA 90 bp ACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGATAAAAAGCCACGTCTaGTCTCCACTAGGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: TLAVSPWPAQTANGHTKWIKSHV*SPLGSH
Trigger: GTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTAT...CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR GCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAATTTGTCCTGCAACCTaGTGCTTCAGATGGCTCTTA +
Preference number: 2 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTICPAT*CFRWLL
Trigger: TAAGAGCCATCTGAAGCAGCAGGTTGCAGGACAAAT...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR GCA 90 bp CCACTGTTGAGTAAGGACAGCAGAGGTCCCTTGCCATGCCTCCCTTCTGCCCTTAAAGCTGAAAAGCACTaGCTCTTAAAAACCGATCAC +
Preference number: 2 (lower is better)
Translates to: PLLSKDSRGPLPCLPSALKAEKH*LLKTDH
Trigger: GTGATCGGTTTTTAAGAGGCAGTGCTTTTCAGCTTT...AAGGGCAGAAGGGAGGCATGGCAAGGGACCTCTGCTGTCCTTACTCAACAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CCA 90 bp TGCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACGGAACAGATGCTGGCTaGTATGACCCATGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: CRCKTEASFDIFRTIAAHGTDAG*YDPWES
Trigger: GGACTCCCATGGGTCATACCAGCCAGCATCTGTTCC...GTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
3UTR-3UTR CCA 90 bp ACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGACTTCTGCGAGGAGTTaGAAGAAGTTATTGCCATTG +
Preference number: 2 (lower is better)
Translates to: TLAVSPWPAQTANGHTKWTSARS*KKLLPL
Trigger: CAATGGCAATAACTTCTTCCAACTCCTCGCAGAAGT...CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR TCA 90 bp TGGAAGAAGTTATTGCCATTGATGTGTGTCACACAGGCAGACAACAGAGGGAGGGAAGACTTTGTTTTCTaGTGTCCCAGCAGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: WKKLLPLMCVTQADNRGREDFVF*CPSSQS
Trigger: ACTCTGGCTGCTGGGACATCAGAAAACAAAGTCTTC...CCTCCCTCTGTTGTCTGCCTGTGTGACACACATCAATGGCAATAACTTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CCA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAAAAAAACCGATCACACTaGCTATGTGAGCCTACCACA +
Preference number: 2 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQEKNRSH*LCEPTT
Trigger: TGTGGTAGGCTCACATAGCCAGTGTGATCGGTTTTT...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 72 bp GAAGCGGGGAGCAAGAGAGAGGAAAGCCCCTCTCGGTaGAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGT +
Preference number: 3 (lower is better)
Translates to: EAGSKREESPSR*RLPASPTSARS
Trigger: ACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCTCTCTCTTGCTCCCCGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 72 bp GTACTGCAGCTGGGCAGACTGGCGGGAATCCATAGGTaGGCTGGGGACCCATGTACCCATGGCTGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: VLQLGRLAGIHR*AGDPCTHGCWG
Trigger: GCCCCAGCAGCCATGGGTACATGGGTCCCCAGCTCACCTATGGATTCCCGCCAGTCTGCCCAGCTGCAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 72 bp GGAGCAAGAGAGAGGAAAGCCCCTCTCGGTGCAGGCTaGCGGCCTCTCCCACTTCTGCGAGGAGTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: GARERKAPLGAG*RPLPLLRGVGR
Trigger: TCTTCCAACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCTCTCTCTTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 72 bp CAACAGAGGGAGGAAGCAAGGGGTGCCGGCGACCATTaGCTTCCCAGAACGGAATTCCGCGGACTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: QQREEARGAGDH*LPRTEFRGLLC
Trigger: ACACAGCAGTCCGCGGAATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACCCCTTGCTTCCTCCCTCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 72 bp CGCTCTCCACCTCCCCTTCTGTGGGTTCCACCACTATaGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGT +
Preference number: 3 (lower is better)
Translates to: RSPPPLLWVPPL*RADGPSVCSSG
Trigger: ACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGGGGAGGTGGAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
3UTR CCA 72 bp CGCCTGCAGGCAGGGGCTGGGCAGGTTGGCCCTATGTaGTCCCATCTCACTCTGAGAACCTCATGTACAAGG +
Preference number: 3 (lower is better)
Translates to: RLQAGAGQVGPM*SHLTLRTSCTR
Trigger: CCTTGTACATGAGGTTCTCAGAGTGAGATGGGACCACATAGGGCCAACCTGCCCAGCCCCTGCCTGCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR GCA 72 bp CCTGGACTGACTGGAGACCTGAGGGGACATGCTGCGTaGCTTGGTTGGCCGAGTTTAGCTCAAGGAAGGCTC +
Preference number: 3 (lower is better)
Translates to: PGLTGDLRGHAA*LGWPSLAQGRL
Trigger: GAGCCTTCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 72 bp GGGTCAACCTGGACTGACTGGAGACCTGAGGGGACATaGTGCGTGCCTTGGTTGGCCGAGTTTAGCTCAAGG +
Preference number: 3 (lower is better)
Translates to: GSTWTDWRPEGT*CVPWLAEFSSR
Trigger: CCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCAGGTTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp CTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTAGCTACCCACCAAGACCCATaGGAATCCCACCACTGCCTC +
Preference number: 3 (lower is better)
Translates to: LTGDLRGHAACLGWPSLATHQDP*ESHHCL
Trigger: GAGGCAGTGGTGGGATTCCAATGGGTCTTGGTGGGT...AGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAGCCTCCCTTCTGCCCTaGTCCGGGAACAACATGGGG +
Preference number: 3 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTASLLP*SGNNMG
Trigger: CCCCATGTTGTTCCCGGACAAGGGCAGAAGGGAGGC...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 72 bp TTGGAAGGGCAGCAGTTAAGGGAGAGACCTTCGTGCTaGGTGTCCACCCTGGGGCTTCCAACAAGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: LEGQQLRERPSC*VSTLGLPTRAG
Trigger: TCCTGCCCTTGTTGGAAGCCCCAGGGTGGACACTCAGCACGAAGGTCTCTCCCTTAACTGCTGCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 72 bp TGCCTTGGTTGGCCGAGTTTAGCTCAAGGAAGGCTCTaGGTCCACCTCTTGGCCACACGGTACTGCTCTCGG +
Preference number: 3 (lower is better)
Translates to: CLGWPSLAQGRL*VHLLATRYCSR
Trigger: CCGAGAGCAGTACCGTGTGGCCAAGAGGTGGACTCAGAGCCTTCCTTGAGCTAAACTCGGCCAACCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 72 bp CCACTGTTGAGTAAGGACAGCAGAGGTCCCTTGCCATaGCTCCCTTCTGCCCTTGTCCGGGAACAACATGGG +
Preference number: 3 (lower is better)
Translates to: PLLSKDSRGPLP*LPSALVREQHG
Trigger: CCCATGTTGTTCCCGGACAAGGGCAGAAGGGAGGCATGGCAAGGGACCTCTGCTGTCCTTACTCAACAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 72 bp CCACCGCTGAGGGTCCTGACATTAGCTGTCAGCCCCTaGCCTGCTCAGACTGCAAACGGTCATACAAAGTGG +
Preference number: 3 (lower is better)
Translates to: PPLRVLTLAVSP*PAQTANGHTKW
Trigger: CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGACCCTCAGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 72 bp TCAACCTGGACTGACTGGAGACCTGAGGGGACATGCTaGGTGCCTTGGTTGGCCGAGTTTAGCTCAAGGAAG +
Preference number: 3 (lower is better)
Translates to: STWTDWRPEGTC*VPWLAEFSSRK
Trigger: CTTCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCAGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 72 bp ACTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTaGTTGGCCGAGTTTAGCTCAAGGAAGGCTCTGAGT +
Preference number: 3 (lower is better)
Translates to: TDWRPEGTCCVP*LAEFSSRKALS
Trigger: ACTCAGAGCCTTCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp GGGGTGCCGGCGACCATTGGCTTCCCAGAACGGAATTCCGCGGACTGCTGTGTCACATTTTCAGAACAATaGCGGCTCACTCTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: GVPATIGFPERNSADCCVTFSEQ*RLTLFF
Trigger: GAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGT...GACACAGCAGTCCGCGGAATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 72 bp GTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTaGAGCAGCGGTCAAAATCTGACGGGTCTGGGAAGA +
Preference number: 3 (lower is better)
Translates to: VPPLWRADGPSV*SSGQNLTGLGR
Trigger: TCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
3UTR-3UTR CAA 90 bp CCACTGTTGAGTAAGGACAGCAGAGGTCCCTTGCCATGCCTCCCTTCTGCCCTTTACCCCAAATGTTCCTaGCTTGCTTTGCACATGCCC +
Preference number: 3 (lower is better)
Translates to: PLLSKDSRGPLPCLPSALYPKCS*LALHMP
Trigger: GGGCATGTGCAAAGCAAGCAAGGAACATTTGGGGTA...AAGGGCAGAAGGGAGGCATGGCAAGGGACCTCTGCTGTCCTTACTCAACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGAGAGAGATGAAGACTTaGTTTTCTGATGTCCCAGCA +
Preference number: 3 (lower is better)
Translates to: NRPRSPMGREYCSWADWRREMKT*FSDVPA
Trigger: TGCTGGGACATCAGAAAACAAAGTCTTCATCTCTCT...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAACACCTCCAGCTGGCTTaGCAGGCAGCCAATTGCTCC +
Preference number: 3 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQEHLQLA*QAANCS
Trigger: GGAGCAATTGGCTGCCTGCAAAGCCAGCTGGAGGTG...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp GTATGGATGAACCACTCTCTGCAGCCAAAACAGAACGAAGCGGGGAGCAAGAGATGCTGCGTGCCTTGGTaGGCCGAGTTTAGCTCAAGG +
Preference number: 3 (lower is better)
Translates to: VWMNHSLQPKQNEAGSKRCCVPW*AEFSSR
Trigger: CCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCA...TCTCTTGCTCCCCGCTTCGTTCTGTTTTGGCTGCAGAGAGTGGTTCATCCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 72 bp TGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTaGAAGAAGTTATTGCCATTGATGTGTGTCACACAG +
Preference number: 3 (lower is better)
Translates to: CRLPASPTSARS*KKLLPLMCVTQ
Trigger: CTGTGTGACACACATCAATGGCAATAACTTCTTCCAACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp ACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGCTTTCTCAGAGGGCCTaGCAAATTGTCAGAGGGCTC +
Preference number: 3 (lower is better)
Translates to: TLAVSPWPAQTANGHTKWLSQRA*QIVRGL
Trigger: GAGCCCTCTGACAATTTGCAAGGCCCTCTGAGAAAG...CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 72 bp CTGGGCAGGTTGGCCCTATGTGGTCCCATCTCACTCTaGGAACCTCATGTACAAGGCTGTGACTCAACGTTT +
Preference number: 3 (lower is better)
Translates to: LGRLALCGPISL*EPHVQGCDSTF
Trigger: AAACGTTGAGTCACAGCCTTGTACATGAGGTTCTCAGAGTGAGATGGGACCACATAGGGCCAACCTGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR-3UTR CAA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAACCAAATGTTCCTTGCTaGCTTTGCACATGCCCCACC +
Preference number: 3 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQEPNVPC*LCTCPT
Trigger: GGTGGGGCATGTGCAAAGCAAGCAAGGAACATTTGG...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR-3UTR CAA 90 bp TGGAAGAAGTTATTGCCATTGATGTGTGTCACACAGGCAGACAACAGAGGGAGGTCTCGGGAGCAAGTCTaGGAAGGGCAGCAGTTAAGG +
Preference number: 3 (lower is better)
Translates to: WKKLLPLMCVTQADNRGRSREQV*EGQQLR
Trigger: CCTTAACTGCTGCCCTTCCAAGACTTGCTCCCGAGA...CCTCCCTCTGTTGTCTGCCTGTGTGACACACATCAATGGCAATAACTTCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 72 bp TTTTCTGATGTCCCAGCAGCCAGAGTGAATGTCTGCTaGGCGCATCCTGGCTGCAGTTCTCTGCTCAATGTT +
Preference number: 3 (lower is better)
Translates to: FSDVPAARVNVC*AHPGCSSLLNV
Trigger: AACATTGAGCAGAGAACTGCAGCCAGGATGCGCTCAGCAGACATTCACTCTGGCTGCTGGGACATCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 72 bp CTAATTGGTTCACACGCTGTTTTCCAAGATGTGAGCTaGGAAGGGCTAGCTCTTCTGGCGTATCCCATACCC +
Preference number: 3 (lower is better)
Translates to: LIGSHAVFQDVS*EGLALLAYPIP
Trigger: GGGTATGGGATACGCCAGAAGAGCTAGCCCTTCCCAGCTCACATCTTGGAAAACAGCGTGTGAACCAATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR TCA 72 bp CTCTCCTCCCTGTCATATAGACCAACACACCTGAAATaGAAGCAAAGGGTGGGGTGGGTGAAACTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: LSSLSYRPTHLK*KQRVGWVKLER
Trigger: TCTCTCCAGTTTCACCCACCCCACCCTTTGCTTTCATTTCAGGTGTGTTGGTCTATATGACAGGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR GCA 72 bp TCTTTATTTTCTTTCGCTGTCTCTTCGCAGTTATCTTaGTCATCCTCCTGGACCAGGAACTCCTCAGGGGGC +
Preference number: 3 (lower is better)
Translates to: SLFSFAVSSQLS*SSSWTRNSSGG
Trigger: GCCCCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGCGAAAGAAAATAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406087.5
3UTR CCA 72 bp CCCAGCAGCCAGAGTGAATGTCTGCTGAGCGCATCCTaGCTGCAGTTCTCTGCTCAATGTTTTCTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: PSSQSECLLSAS*LQFSAQCFLKN
Trigger: GTTTTTAAGAAAACATTGAGCAGAGAACTGCAGCCAGGATGCGCTCAGCAGACATTCACTCTGGCTGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 72 bp GGTGAAACTGGAGAGAGAGATGAAGACTTTGTTTTCTaGTGTCCCAGCAGCCAGAGTGAATGTCTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: GETGERDEDFVF*CPSSQSECLLS
Trigger: GCTCAGCAGACATTCACTCTGGCTGCTGGGACATCAGAAAACAAAGTCTTCATCTCTCTCTCCAGTTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR TCA 72 bp CTCGGTGATCTGCAGGTGCAAAACAGAAGCCTCGTTTaGCATTTTCAGAACAATTGCGGCTCACTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: LGDLQVQNRSLV*HFQNNCGSLSS
Trigger: AGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGCAGATCACCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CCA 72 bp CCTCATGTACAAGGCTGTGACTCAACGTTTTCTTCATaGCTGAGAGGTGCTAATTGGTTCACACGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: PHVQGCDSTFSS*LRGANWFTRCF
Trigger: AAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCATGAAGAAAACGTTGAGTCACAGCCTTGTACATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR TCA 72 bp ATGTACAAGGCTGTGACTCAACGTTTTCTTCATGGCTaGGAGGTGCTAATTGGTTCACACGCTGTTTTCCAA +
Preference number: 3 (lower is better)
Translates to: MYKAVTQRFLHG*EVLIGSHAVFQ
Trigger: TTGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCATGAAGAAAACGTTGAGTCACAGCCTTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR GCA 90 bp CTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTAGCTCCTCTCGGTGCAGGCTaGCGGCCTCTCCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LTGDLRGHAACLGWPSLAPLGAG*RPLPLL
Trigger: CAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGG...AGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AGGAAAGCCCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTGGTGCCGGCGACCATTaGCTTCCCAGAACGGAATTC +
Preference number: 4 (lower is better)
Translates to: RKAPLGAGCRPLPLLRGVGAGDH*LPRTEF
Trigger: GAATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACC...AACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AGGGGCTGGGCAGGTTGGCCCTATGTGGTCCCATCTCACTCTGAGAACCTCATGCCTGCAGGCAGGGGCTaGGCAGGTTGGCCCTATGTG +
Preference number: 4 (lower is better)
Translates to: RGWAGWPYVVPSHSENLMPAGRG*AGWPYV
Trigger: CACATAGGGCCAACCTGCCCAGCCCCTGCCTGCAGG...CATGAGGTTCTCAGAGTGAGATGGGACCACATAGGGCCAACCTGCCCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR TCA 90 bp GGGGTGCCGGCGACCATTGGCTTCCCAGAACGGAATTCCGCGGACTGCTGTGTCGCAGCGGTCAAAATCTaGCGGGTCTGGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: GVPATIGFPERNSADCCVAAVKI*RVWEDL
Trigger: CAGATCTTCCCAGACCCGTCAGATTTTGACCGCTGC...GACACAGCAGTCCGCGGAATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp TGGACTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTGGAGGAAGCAAGGGGTaGCGGCGACCATTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WTDWRPEGTCCVPWLAEFGGSKG*RRPLAS
Trigger: GGAAGCCAATGGTCGCCGGCACCCCTTGCTTCCTCC...AAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 72 bp ACAACAGAGGGAGGAAGCAAGGGGTGCCGGCGACCATaGGCTTCCCAGAACGGAATTCCGCGGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TTEGGSKGCRRP*ASQNGIPRTAV
Trigger: CACAGCAGTCCGCGGAATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACCCCTTGCTTCCTCCCTCTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp GGGCAGGTTGGCCCTATGTGGTCCCATCTCACTCTGAGAACCTCATGTACAAGGCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GQVGPMWSHLTLRTSCTRHPCGG*GRSPPW
Trigger: CCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATG...CCTTGTACATGAGGTTCTCAGAGTGAGATGGGACCACATAGGGCCAACCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR TCA 90 bp ACTCGATCCCAAGGTTGCCACGACAGCCTTGTCCCCACCATGCAAGTCACCTCCGCGGGAATCCATAGGTaGGCTGGGGACCCATGTACC +
Preference number: 4 (lower is better)
Translates to: TRSQGCHDSLVPTMQVTSAGIHR*AGDPCT
Trigger: GGTACATGGGTCCCCAGCTCACCTATGGATTCCCGC...GGAGGTGACTTGCATGGTGGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGACACACGTCCAGAACTaGGGGTCAACCTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: NRPRSPMGREYCSWADWRTHVQN*GSTWTD
Trigger: GTCAGTCCAGGTTGACCCTCAGTTCTGGACGTGTGT...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGACCTCCAGCTGGCTTTaGAGGCAGCCAATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: NRPRSPMGREYCSWADWRTSSWL*RQPIAP
Trigger: AGGAGCAATTGGCTGCCTGCAAAGCCAGCTGGAGGT...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp CGCCTGCAGGCAGGGGCTGGGCAGGTTGGCCCTATGTGGTCCCATCTCACTCTGTTCCAAGATGTGAGCTaGGAAGGGCTAGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLQAGAGQVGPMWSHLTLFQDVS*EGLALL
Trigger: CAGAAGAGCTAGCCCTTCCCAGCTCACATCTTGGAA...CAGAGTGAGATGGGACCACATAGGGCCAACCTGCCCAGCCCCTGCCTGCAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
3UTR CAA 72 bp ACAGCAGAGGTCCCTTGCCATGCCTCCCTTCTGCCCTaGTCCGGGAACAACATGGGGAGAAGCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: TAEVPCHASLLP*SGNNMGRSQGS
Trigger: AGATCCCTGGCTTCTCCCCATGTTGTTCCCGGACAAGGGCAGAAGGGAGGCATGGCAAGGGACCTCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp TCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGTCAAAATCTCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: STTMEGRRSFSLQQRSKSHPCGG*GRSPPW
Trigger: CCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATG...AGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR GCA 90 bp CTCATGACATCCTTTAGTCTCAAACTCGATCCCAAGGTTGCCACGACAGCCTTGGCACCCTCGTCCTCCTaGCCCGGCATCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LMTSFSLKLDPKVATTALAPSSS*PGIPRA
Trigger: GGCTCTGGGGATGCCGGGGCAGGAGGACGAGGGTGC...CAAGGCTGTCGTGGCAACCTTGGGATCGAGTTTGAGACTAAAGGATGTCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GCTGTCTCTTCGCAGTTATCTTGCTCATCCTCCTGGACCAGGAACTCCTCAGGGGCGACGTCGGCAAGGTaGACACAACTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: AVSSQLSCSSSWTRNSSGATSAR*TQLPAL
Trigger: GAGAGCGGGGAGTTGTGTCCACCTTGCCGACGTCGC...CCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR CCA 90 bp ACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGTCAAAATCTGACGGGGCGACGTCGGCAAGGTaGACACAACTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: TMEGRRSFSLQQRSKSDGATSAR*TQLPAL
Trigger: GAGAGCGGGGAGTTGTGTCCACCTTGCCGACGTCGC...CCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR TCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAGAGAGACCTTCGTGCTaGGTGTCCACCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTERPSC*VSTLGL
Trigger: AAGCCCCAGGGTGGACACTCAGCACGAAGGTCTCTC...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CACCTCCCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACCTGAGGGGACATGCTaGGTGCCTTGGTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: HLPNKTHKKPRLLSTRLPPEGTC*VPWLAE
Trigger: CTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGG...TGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp ACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGCGGAATTCCGCGGACTaGTGTGTCCACAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: TLAVSPWPAQTANGHTKWRNSAD*CVHSAP
Trigger: GGGTGCGCTGTGGACACAGCAGTCCGCGGAATTCCG...CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGGAAAGCCCCTCTCGGTaGAGGCTGCCGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HDGKNTVQEQMLAGMTHGESPSR*RLPASP
Trigger: GGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTC...CCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AGTTATCTTGCTCATCCTCCTGGACCAGGAACTCCTCAGGGGGCCACCGGAGCTGGCCGATCTCCTCCATaGGCTGGGTGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: SYLAHPPGPGTPQGATGAGRSPP*AGCSSS
Trigger: TGATGATGAACACCCAGCCCATGGAGGAGATCGGCC...AGCTCCGGTGGCCCCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406087.5
3UTR CAA 72 bp GACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTaGGCCGAGTTTAGCTCAAGGAAGGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DWRPEGTCCVPW*AEFSSRKALSP
Trigger: TGGACTCAGAGCCTTCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAACATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQEHPCGG*GRSPPW
Trigger: CCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATG...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp TTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGCAGCGGTCAAAATCTaGCGGGTCTGGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: FCGFHHYGGQTVLQFAAAAAVKI*RVWEDL
Trigger: CAGATCTTCCCAGACCCGTCAGATTTTGACCGCTGC...CGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR TCA 90 bp AGGGGCTGGGCAGGTTGGCCCTATGTGGTCCCATCTCACTCTGAGAACCTCATGGGTCCCATCTCACTCTaGGAACCTCATGTACAAGGC +
Preference number: 4 (lower is better)
Translates to: RGWAGWPYVVPSHSENLMGPISL*EPHVQG
Trigger: GCCTTGTACATGAGGTTCTCAGAGTGAGATGGGACC...CATGAGGTTCTCAGAGTGAGATGGGACCACATAGGGCCAACCTGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR GCA 90 bp GGGGTGCCGGCGACCATTGGCTTCCCAGAACGGAATTCCGCGGACTGCTGTGTCCTGCCTCTACTAGGCTaGCTGAGTTCAGATAATGAT +
Preference number: 4 (lower is better)
Translates to: GVPATIGFPERNSADCCVLPLLG*LSSDND
Trigger: ATCATTATCTGAACTCAGGCAGCCTAGTAGAGGCAG...GACACAGCAGTCCGCGGAATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp TGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGTCAATGGGTTCCACCACTATaGAGGGCAGACGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: WVPPLWRADGPSVCSSGQWVPPL*RADGPS
Trigger: TGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCA...TTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR CCA 90 bp CTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTAGCTCACTTCACCTCCAGCTaGCTTTGCAGGCAGCCAATT +
Preference number: 4 (lower is better)
Translates to: LTGDLRGHAACLGWPSLAHFTSS*LCRQPI
Trigger: AATTGGCTGCCTGCAAAGCCAGCTGGAGGTGAAGTG...AGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACATGCAGCTGGGCAGACTaGCGGGAATCCATAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTCSWAD*RESIGE
Trigger: CTCACCTATGGATTCCCGCCAGTCTGCCCAGCTGCA...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 72 bp GGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTaGCAGCAGCGGTCAAAATCTGACGGGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSTTMEGRRSFS*QQRSKSDGSGK
Trigger: CTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR TCA 90 bp AGGAAAGCCCCTCTCGGTGCAGGCTGCCGGCCTCTCCCACTTCTGCGAGGAGTTTCTCTTCTTCCGTCATaGTGGGAAAAACACAGTTCA +
Preference number: 4 (lower is better)
Translates to: RKAPLGAGCRPLPLLRGVSLLPS*WEKHSS
Trigger: TGAACTGTGTTTTTCCCATCATGACGGAAGAAGAGA...AACTCCTCGCAGAAGTGGGAGAGGCCGGCAGCCTGCACCGAGAGGGGCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp ACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGCTGCTCTCGGCGGACTaGAGCATTTGTCCTGCAACC +
Preference number: 4 (lower is better)
Translates to: TLAVSPWPAQTANGHTKWLLSAD*SICPAT
Trigger: GGTTGCAGGACAAATGCTTCAGTCCGCCGAGAGCAG...CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp CACCTCCCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCAGCTCAAGGAAGGCTCTaGGTCCACCTCTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: HLPNKTHKKPRLLSTRLPAQGRL*VHLLAT
Trigger: TGTGGCCAAGAGGTGGACTCAGAGCCTTCCTTGAGC...TGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGGGAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp CTGCAGGCAGGGGCTGGGCAGGTTGGCCCTATGTGGTCCCATCTCACTCTGAGACGTTTTCTTCATGGCTaGGAGGTGCTAATTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LQAGAGQVGPMWSHLTLRRFLHG*EVLIGS
Trigger: TGAACCAATTAGCACCTCTCAGCCATGAAGAAAACG...TCTCAGAGTGAGATGGGACCACATAGGGCCAACCTGCCCAGCCCCTGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR TCA 90 bp TCTTCGCAGTTATCTTGCTCATCCTCCTGGACCAGGAACTCCTCAGGGGGCCACGCAGCGGTCAAAATCTaGCGGGTCTGGGAAGATTCA +
Preference number: 4 (lower is better)
Translates to: SSQLSCSSSWTRNSSGGHAAVKI*RVWEDS
Trigger: TGAATCTTCCCAGACCCGTCAGATTTTGACCGCTGC...GTGGCCCCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR GCA 90 bp TGGACTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTGACGGTCCTTCAGTTTaGAGCAGCGGTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: WTDWRPEGTCCVPWLAEFDGPSV*SSGQNL
Trigger: CAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTC...AAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp ACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGTCAAAATCTGACGGGGGCCGATCTCCTCCATaGGCTGGGTGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: TMEGRRSFSLQQRSKSDGGRSPP*AGCSSS
Trigger: TGATGATGAACACCCAGCCCATGGAGGAGATCGGCC...CCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR CCA 90 bp GCTGTCTCTTCGCAGTTATCTTGCTCATCCTCCTGGACCAGGAACTCCTCAGGGTGGGTTCCACCACTATaGAGGGCAGACGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AVSSQLSCSSSWTRNSSGWVPPL*RADGPS
Trigger: TGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCA...CCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR CCA 90 bp CCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGTCTAGGGACCAGCAACCCACCAAGACCCATTaGAATCCCACCACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PWPAQTANGHTKWSRDQQPTKTH*NPTTAS
Trigger: AGAGGCAGTGGTGGGATTCCAATGGGTCTTGGTGGG...TTGCTGGTCCCTAGACCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGAAAAACCGATCACACTaGCTATGTGAGCCTACCACA +
Preference number: 4 (lower is better)
Translates to: NRPRSPMGREYCSWADWRKNRSH*LCEPTT
Trigger: TGTGGTAGGCTCACATAGCCAGTGTGATCGGTTTTT...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GGGCTTCCAACAAGGGCAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAACGTGAGTACTGCAGCTaGGCAGACTGGCGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GLPTRAGSALTTPKKCWEREYCS*ADWRES
Trigger: GGATTCCCGCCAGTCTGCCCAGCTGCAGTACTCACG...TTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTGCCCTTGTTGGAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 72 bp AGTCTCAAACTCGATCCCAAGGTTGCCACGACAGCCTaGTCCCCACCATGCAAGTCACCTCCCCAACAAGAC +
Preference number: 4 (lower is better)
Translates to: SLKLDPKVATTA*SPPCKSPPQQD
Trigger: GTCTTGTTGGGGAGGTGACTTGCATGGTGGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGTTTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp TTATTTTCTTTCGCTGTCTCTTCGCAGTTATCTTGCTCATCCTCCTGGACCAGGCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LFSFAVSSQLSCSSSWTRHPCGG*GRSPPW
Trigger: CCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATG...CCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGCGAAAGAAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR TCA 90 bp CACCTCCCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCAAGAGTGAATGTCTGCTaGGCGCATCCTGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HLPNKTHKKPRLLSTRLPRVNVC*AHPGCS
Trigger: ACTGCAGCCAGGATGCGCTCAGCAGACATTCACTCT...TGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGGGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp TCCCCTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGTTTAAAAACGGTCCCTaGGTCCCGAGTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SPSVGSTTMEGRRSFSLQFKNGP*VPSEDD
Trigger: GTCATCCTCACTCGGGACGCAGGGACCGTTTTTAAA...CTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406087.5
ENST00000412933.5
CDS-3UTR GCA 90 bp GTATGGATGAACCACTCTCTGCAGCCAAAACAGAACGAAGCGGGGAGCAAGAGAAGAGGTCCCTTGCCATaGCTCCCTTCTGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VWMNHSLQPKQNEAGSKRRGPLP*LPSALV
Trigger: GACAAGGGCAGAAGGGAGGCATGGCAAGGGACCTCT...TCTCTTGCTCCCCGCTTCGTTCTGTTTTGGCTGCAGAGAGTGGTTCATCCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp CGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGCGACGTCGGCAAGGTaGACACAACTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RHDGKNTVQEQMLAGMTHATSAR*TQLPAL
Trigger: GAGAGCGGGGAGTTGTGTCCACCTTGCCGACGTCGC...ATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTCCACAGGGGGCCGATCTCCTCCATaGGCTGGGTGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: KHSSGTDAGWYDPWESTGGRSPP*AGCSSS
Trigger: TGATGATGAACACCCAGCCCATGGAGGAGATCGGCC...CCCTGTGGACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp GCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTGGACCCATGTACCCATaGCTGCTGGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGAKQKPRLTFSEQLRLTGPMYP*LLGLGQ
Trigger: CTGCCCCAGCCCCAGCAGCCATGGGTACATGGGTCC...AGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTCCAGACCAAGATCCCCCATaGGGCGTGAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKNTVQEQMLAGMTHGSPDQDPP*GVSTAA
Trigger: AGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTC...TGGACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp CACCTCCCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCATGTCCGGGAACAACATaGGGAGAAGCCAGGGATCTC +
Preference number: 4 (lower is better)
Translates to: HLPNKTHKKPRLLSTRLPCPGTT*GEARDL
Trigger: GAGATCCCTGGCTTCTCCCCATGTTGTTCCCGGACA...TGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGGGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AGAGGTGCTAATTGGTTCACACGCTGTTTTCCAAGATGTGAGCTGGGAAGGGCTAGGGGCTGGGCAGGTTaGCCCTATGTGGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: RGANWFTRCFPRCELGRARGWAG*PYVVPS
Trigger: AGATGGGACCACATAGGGCCAACCTGCCCAGCCCCT...AGCCCTTCCCAGCTCACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR TCA 90 bp GCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: AKQKPRLTFSEQLRLTLFHPCGG*GRSPPW
Trigger: CCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATG...GAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR TCA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAAAGATGCTGGCTGGTATaGCCCATGGGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQERCWLV*PMGVHR
Trigger: CCTGTGGACTCCCATGGGTCATACCAGCCAGCATCT...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp CATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGTCCCAGCAGCCAGAGTaGATGTCTGCTGAGCGCATC +
Preference number: 4 (lower is better)
Translates to: HDGKNTVQEQMLAGMTHGSQQPE*MSAERI
Trigger: GATGCGCTCAGCAGACATTCACTCTGGCTGCTGGGA...CCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp ACTCGATCCCAAGGTTGCCACGACAGCCTTGTCCCCACCATGCAAGTCACCTCCAAGCCAGGGATCTCATaGCATCCTTTAGTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TRSQGCHDSLVPTMQVTSKPGIS*HPLVSN
Trigger: GTTTGAGACTAAAGGATGTCATGAGATCCCTGGCTT...GGAGGTGACTTGCATGGTGGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGTGCTTGCTTTGCACATaGCCCACCTCCCACCCACCA +
Preference number: 4 (lower is better)
Translates to: HDGKNTVQEQMLAGMTHGCLLCT*PTSHPP
Trigger: TGGTGGGTGGGAGGTGGGGCATGTGCAAAGCAAGCA...CCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGAAAGCTGAAAAGCACTaGCTCTTAAAAACCGATCAC +
Preference number: 4 (lower is better)
Translates to: NRPRSPMGREYCSWADWRKAEKH*LLKTDH
Trigger: GTGATCGGTTTTTAAGAGGCAGTGCTTTTCAGCTTT...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp GCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTATGGGGCGTGAGTACTaGAGCTGGGCAGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: AGAKQKPRLTFSEQLRLTMGREY*SWADWR
Trigger: CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCAT...AGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp TTCCGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCACAGCAGAGGTCCCTTaGCATGCCTCCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FRHDGKNTVQEQMLAGMTTAEVP*HASLLP
Trigger: GGGCAGAAGGGAGGCATGGCAAGGGACCTCTGCTGT...GGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp CCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGTCTAGGGACCAGCAATCACCTCAGTCATCTTaGCCGATCTCAGATAGTCGG +
Preference number: 4 (lower is better)
Translates to: PWPAQTANGHTKWSRDQQSPQSS*PISDSR
Trigger: CCGACTATCTGAGATCGGCCAAGATGACTGAGGTGA...TTGCTGGTCCCTAGACCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTCCACTGCTGAGCGCATCCTaGCTGCAGTTCTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GKNTVQEQMLAGMTHGSPLLSAS*LQFSAQ
Trigger: TTGAGCAGAGAACTGCAGCCAGGATGCGCTCAGCAG...TGGACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp TCACCTCCAGCTGGCTTTGCAGGCAGCCAATTGCTCCTGCTCTCCTTTACTCTCGGCCATGGAGTAGAATaGGGTGACCTTTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPPAGFAGSQLLLLSFTLGHGVE*GDLSFP
Trigger: AGGAAAGGAAAGGTCACCCCATTCTACTCCATGGCC...GAGAGTAAAGGAGAGCAGGAGCAATTGGCTGCCTGCAAAGCCAGCTGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GGGCTTCCAACAAGGGCAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCTGCGTGCCTTGGTTaGCCGAGTTTAGCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLPTRAGSALTTPKKCWEAACLG*PSLAQG
Trigger: TCCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGC...TTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTGCCCTTGTTGGAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CCCCTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGCCCACAGGGACTCTACTaGTCTTTATTTTCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: PLLWVPPLWRADGPSVCSPQGLY*SLFSFA
Trigger: AGCGAAAGAAAATAAAGAGCAGTAGAGTCCCTGTGG...GCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR GCA 90 bp CTCATGACATCCTTTAGTCTCAAACTCGATCCCAAGGTTGCCACGACAGCCTTGGCCTTGTCCCCACCATaGAAGTCACCTCCCCAACAA +
Preference number: 4 (lower is better)
Translates to: LMTSFSLKLDPKVATTALALSPP*KSPPQQ
Trigger: TTGTTGGGGAGGTGACTTGCATGGTGGGGACAAGGC...CAAGGCTGTCGTGGCAACCTTGGGATCGAGTTTGAGACTAAAGGATGTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp GATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTAGGGGACATGCTGCGTaGCTTGGTTGGCCGAGTTTA +
Preference number: 4 (lower is better)
Translates to: DGKNTVQEQMLAGMTHGSRGHAA*LGWPSL
Trigger: TAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCT...ACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTTGGGTTCCACCACTATaGAGGGCAGACGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DGKNTVQEQMLAGMTHGSWVPPL*RADGPS
Trigger: TGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCA...ACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp TTCTTTCGCTGTCTCTTCGCAGTTATCTTGCTCATCCTCCTGGACCAGGAACTCGGCTGGTATGACCCATaGGAGTCCACAGGGACTCTA +
Preference number: 4 (lower is better)
Translates to: FFRCLFAVILLILLDQELGWYDP*ESTGTL
Trigger: TAGAGTCCCTGTGGACTCCCATGGGTCATACCAGCC...GAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGCGAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR CCA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAAGGAACAGATGCTGGCTaGTATGACCCATGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQEGTDAG*YDPWES
Trigger: GGACTCCCATGGGTCATACCAGCCAGCATCTGTTCC...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTGGAACAGATGCTGGCTaGTATGACCCATGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DGKNTVQEQMLAGMTHGSGTDAG*YDPWES
Trigger: GGACTCCCATGGGTCATACCAGCCAGCATCTGTTCC...ACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp CGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATGATGGGAAGGAAGGGCCAGCCTaGAAGACCACGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: RLTFSEQLRLTLFFRHDGKEGPA*KTTPTP
Trigger: TGGAGTGGGCGTGGTCTTCCAGGCTGGCCCTTCCTT...CCCATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp TCTGCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCAGATGCTGGCTGGTATaGCCCATGGGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: SAGAKQKPRLTFSEQLRLRCWLV*PMGVHR
Trigger: CCTGTGGACTCCCATGGGTCATACCAGCCAGCATCT...GAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR TCA 90 bp CACCTCCCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCAGAAGACTTTGTTTTCTaGTGTCCCAGCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HLPNKTHKKPRLLSTRLPEDFVF*CPSSQS
Trigger: ACTCTGGCTGCTGGGACATCAGAAAACAAAGTCTTC...TGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGGGAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp GGGCTTCCAACAAGGGCAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAATTTAAAAACGGTCCCTaGGTCCCGAGTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: GLPTRAGSALTTPKKCWEFKNGP*VPSEDD
Trigger: GTCATCCTCACTCGGGACGCAGGGACCGTTTTTAAA...TTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTGCCCTTGTTGGAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CACCTCCCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAATGTTCCTTGCTTaGTTTGCACATGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: HLPNKTHKKPRLLSTRLPQMFLA*FAHAPP
Trigger: AGGTGGGGCATGTGCAAAGCAAGCAAGGAACATTTG...TGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGGGAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp TGCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACACTCGATCCCAAGGTTaGCACGACAGCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CRCKTEASFDIFRTIAAHTRSQG*HDSLVP
Trigger: GGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGT...GTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp TTCTTCCGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGGCCATGCCTCCCTTCTaGCCTTGTCCGGGAACAACA +
Preference number: 4 (lower is better)
Translates to: FFRHDGKNTVQEQMLAGMAMPPF*PCPGTT
Trigger: TGTTGTTCCCGGACAAGGGCAGAAGGGAGGCATGGC...CATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATGATGGGTTGGCCACACGGTACTaGTCTCGGCGGACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RLTFSEQLRLTLFFRHDGLATRY*SRRTEA
Trigger: TGCTTCAGTCCGCCGAGAGCAGTACCGTGTGGCCAA...CCCATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATGATAGACCTGAGGGGACATaGTGCGTGCCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PRLTFSEQLRLTLFFRHDRPEGT*CVPWLA
Trigger: GGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCT...ATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp AGGGCAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATGTCAGCCCCTGGCCTaGTCAGACTGCAAACGGTCA +
Preference number: 4 (lower is better)
Translates to: RAGSALTTPKKCWEAKWICQPLA*SDCKRS
Trigger: TGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACA...TATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp TTTTCTTCATGGCTGAGAGGTGCTAATTGGTTCACACGCTGTTTTCCAAGATGTGCGACGTCGGCAAGGTaGACACAACTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: FSSWLRGANWFTRCFPRCATSAR*TQLPAL
Trigger: GAGAGCGGGGAGTTGTGTCCACCTTGCCGACGTCGC...ACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCATGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR CCA 90 bp GTGGTCCCATCTCACTCTGAGAACCTCATGTACAAGGCTGTGACTCAACGTTTTGGCCGATCTCCTCCATaGGCTGGGTGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: VVPSHSENLMYKAVTQRFGRSPP*AGCSSS
Trigger: TGATGATGAACACCCAGCCCATGGAGGAGATCGGCC...AAAACGTTGAGTCACAGCCTTGTACATGAGGTTCTCAGAGTGAGATGGGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR CCA 90 bp TTCCGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCGGCTGGTATGACCCATaGGAGTCCACAGGGACTCTA +
Preference number: 4 (lower is better)
Translates to: FRHDGKNTVQEQMLAGMTGWYDP*ESTGTL
Trigger: TAGAGTCCCTGTGGACTCCCATGGGTCATACCAGCC...GGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp TGGCTGAGAGGTGCTAATTGGTTCACACGCTGTTTTCCAAGATGTGAGCTGGGACAGGTTGGCCCTATGTaGTCCCATCTCACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: WLRGANWFTRCFPRCELGQVGPM*SHLTLR
Trigger: TCTCAGAGTGAGATGGGACCACATAGGGCCAACCTG...TCCCAGCTCACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR TCA 90 bp TGGAAGAAGTTATTGCCATTGATGTGTGTCACACAGGCAGACAACAGAGGGAGGCCAACACACCTGAAATaGAAGCAAAGGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WKKLLPLMCVTQADNRGRPTHLK*KQRVGW
Trigger: CCACCCCACCCTTTGCTTTCATTTCAGGTGTGTTGG...CCTCCCTCTGTTGTCTGCCTGTGTGACACACATCAATGGCAATAACTTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGGACGGTCCTTCAGTTTaGAGCAGCGGTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: HDGKNTVQEQMLAGMTHGDGPSV*SSGQNL
Trigger: CAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTC...CCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR GCA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACACCACAGGGACTCTACTaGTCTTTATTTTCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTPQGLY*SLFSFA
Trigger: AGCGAAAGAAAATAAAGAGCAGTAGAGTCCCTGTGG...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp GATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTACCAACTCGGTGATCTaGAGGTGCAAAACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: DGKNTVQEQMLAGMTHGSTNSVI*RCKTEA
Trigger: GGCTTCTGTTTTGCACCTGCAGATCACCGAGTTGGT...ACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CTCATGACATCCTTTAGTCTCAAACTCGATCCCAAGGTTGCCACGACAGCCTTGACCCCAAATGTTCCTTaGTTGCTTTGCACATGCCCC +
Preference number: 4 (lower is better)
Translates to: LMTSFSLKLDPKVATTALTPNVP*LLCTCP
Trigger: GGGGCATGTGCAAAGCAAGCAAGGAACATTTGGGGT...CAAGGCTGTCGTGGCAACCTTGGGATCGAGTTTGAGACTAAAGGATGTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp CTCATGACATCCTTTAGTCTCAAACTCGATCCCAAGGTTGCCACGACAGCCTTGATAAAAAGCCACGTCTaGTCTCCACTAGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LMTSFSLKLDPKVATTALIKSHV*SPLGSH
Trigger: GTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTAT...CAAGGCTGTCGTGGCAACCTTGGGATCGAGTTTGAGACTAAAGGATGTCATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp ACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGATTTGTCCTGCAACCTaGTGCTTCAGATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: TLAVSPWPAQTANGHTKWICPAT*CFRWLL
Trigger: TAAGAGCCATCTGAAGCAGCAGGTTGCAGGACAAAT...CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp CGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATGATGGGGGCCGATCTCCTCCATaGGCTGGGTGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: RLTFSEQLRLTLFFRHDGGRSPP*AGCSSS
Trigger: TGATGATGAACACCCAGCCCATGGAGGAGATCGGCC...CCCATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp TGCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTGGGTTCCACCACTATaGAGGGCAGACGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CRCKTEASFDIFRTIAAHWVPPL*RADGPS
Trigger: TGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCA...GTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp GCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTTCTGAGTCCACCTCTTaGCCACACGGTACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AGAKQKPRLTFSEQLRLTSESTS*PHGTAL
Trigger: GAGAGCAGTACCGTGTGGCCAAGAGGTGGACTCAGA...AGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp TTCCGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCACATGCTGCGTGCCTTaGTTGGCCGAGTTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: FRHDGKNTVQEQMLAGMTTCCVP*LAEFSS
Trigger: TGAGCTAAACTCGGCCAACCAAGGCACGCAGCATGT...GGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp TTCTTCCGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGTTAGCTGTCAGCCCCTaGCCTGCTCAGACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: FFRHDGKNTVQEQMLAGMLAVSP*PAQTAN
Trigger: GTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAA...CATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 72 bp GCCTCTCCCACTTCTGCGAGGAGTTGGAAGAAGTTATaGCCATTGATGTGTGTCACACAGGCAGACAACAGA +
Preference number: 4 (lower is better)
Translates to: ASPTSARSWKKL*PLMCVTQADNR
Trigger: TCTGTTGTCTGCCTGTGTGACACACATCAATGGCAATAACTTCTTCCAACTCCTCGCAGAAGTGGGAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 72 bp CTCTTTATTTTCTTTCGCTGTCTCTTCGCAGTTATCTaGCTCATCCTCCTGGACCAGGAACTCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LFIFFRCLFAVI*LILLDQELLRG
Trigger: CCCCCTGAGGAGTTCCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGCGAAAGAAAATAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR TCA 90 bp CCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATGATGCAGCGGTCAAAATCTaGCGGGTCTGGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: PRLTFSEQLRLTLFFRHDAAVKI*RVWEDL
Trigger: CAGATCTTCCCAGACCCGTCAGATTTTGACCGCTGC...ATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR TCA 90 bp GCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCATCACACTGGCTATGTaGGCCTACCACAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AKQKPRLTFSEQLRLTLFITLAM*AYHSWE
Trigger: CTCCCAGCTGTGGTAGGCTCACATAGCCAGTGTGAT...GAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp GCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTTGCCGGCCTCGACGTTaGGACTTGCATGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: AGAKQKPRLTFSEQLRLTCRPRR*DLHANK
Trigger: TTTGTTTGCATGCAAGTCTCAACGTCGAGGCCGGCA...AGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401506.1
CDS-3UTR TCA 90 bp TCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGTCAAAATCTTCCTGGCTAACATGGTaGAACCTCTCATATGGTAAA +
Preference number: 4 (lower is better)
Translates to: STTMEGRRSFSLQQRSKSSWLTW*NLSYGK
Trigger: TTTACCATATGAGAGGTTTCACCATGTTAGCCAGGA...AGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR GCA 90 bp TATGTGGTCCCATCTCACTCTGAGAACCTCATGTACAAGGCTGTGACTCAACGTTTTAAAAACGGTCCCTaGGTCCCGAGTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: YVVPSHSENLMYKAVTQRFKNGP*VPSEDD
Trigger: GTCATCCTCACTCGGGACGCAGGGACCGTTTTTAAA...ACGTTGAGTCACAGCCTTGTACATGAGGTTCTCAGAGTGAGATGGGACCACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR CCA 90 bp GTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATATCAGGGAGTCAACCTGGACTGACTaGAGACCTGAGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: VLSLLLKSAGKQNGYIRESTWTD*RPEGTC
Trigger: GCATGTCCCCTCAGGTCTCCAGTCAGTCCAGGTTGA...CTCCCTGATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AGATGTGAGCTGGGAAGGGCTAGCTCTTCTGGCGTATCCCATACCCGAGTATTCTCAACGTTTTCTTCATaGCTGAGAGGTGCTAATTGG +
Preference number: 4 (lower is better)
Translates to: RCELGRASSSGVSHTRVFSTFSS*LRGANW
Trigger: CCAATTAGCACCTCTCAGCCATGAAGAAAACGTTGA...GAATACTCGGGTATGGGATACGCCAGAAGAGCTAGCCCTTCCCAGCTCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR TCA 90 bp GCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTTGGAGTAGAATGGGGTaGCCTTTCCTTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: AGAKQKPRLTFSEQLRLTWSRMG*PFLSCT
Trigger: AGTGCAGGAAAGGAAAGGTCACCCCATTCTACTCCA...AGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp TTATTTTCTTTCGCTGTCTCTTCGCAGTTATCTTGCTCATCCTCCTGGACCAGGTCTTCGCAGTTATCTTaGTCATCCTCCTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LFSFAVSSQLSCSSSWTRSSQLS*SSSWTR
Trigger: CCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGA...CCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAGACAGCGAAAGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS-3UTR CCA 90 bp AAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCGGCTGGTATGACCCATaGGAGTCCACAGGGACTCTA +
Preference number: 4 (lower is better)
Translates to: KQKPRLTFSEQLRLTLFFGWYDP*ESTGTL
Trigger: TAGAGTCCCTGTGGACTCCCATGGGTCATACCAGCC...GAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp AGAGGTGCTAATTGGTTCACACGCTGTTTTCCAAGATGTGAGCTGGGAAGGGCTCTGAGAGGTGCTAATTaGTTCACACGCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RGANWFTRCFPRCELGRALRGAN*FTRCFP
Trigger: TGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAG...AGCCCTTCCCAGCTCACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR TCA 90 bp TGGCTGAGAGGTGCTAATTGGTTCACACGCTGTTTTCCAAGATGTGAGCTGGGATCATGTACAAGGCTGTaGCTCAACGTTTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: WLRGANWFTRCFPRCELGSCTRL*LNVFFM
Trigger: CATGAAGAAAACGTTGAGTCACAGCCTTGTACATGA...TCCCAGCTCACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR GCA 90 bp GCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTCTTCGCAGTTATCTTaGTCATCCTCCTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: AKQKPRLTFSEQLRLTLFSSQLS*SSSWTR
Trigger: CCTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGA...GAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR GCA 90 bp AGGGCAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATCGGTGATCTGCAGGTaGAAAACAGAAGCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: RAGSALTTPKKCWEAKWISVICR*KTEASF
Trigger: AAACGAGGCTTCTGTTTTGCACCTGCAGATCACCGA...TATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp GTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATATCAGGGAGTTCTCATACAACTGGTaGCCTTGCAGGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLSLLLKSAGKQNGYIREFSYNW*PCRKQW
Trigger: CCACTGCTTCCTGCAAGGGCACCAGTTGTATGAGAA...CTCCCTGATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp GTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATATCAGGGAGCTGGCCTGCTCAGACTaGAAACGGTCATACAAAGTG +
Preference number: 4 (lower is better)
Translates to: VLSLLLKSAGKQNGYIRELACSD*KRSYKV
Trigger: CACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAG...CTCCCTGATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTACCTGCTGCTTCAGATaGCTCTTAGCTACAATAAGA +
Preference number: 4 (lower is better)
Translates to: DGKNTVQEQMLAGMTHGSTCCFR*LLATIR
Trigger: TCTTATTGTAGCTAAGAGCCATCTGAAGCAGCAGGT...ACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp TTCCGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCCACAGGGACTCTACTaGTCTTTATTTTCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: FRHDGKNTVQEQMLAGMTPQGLY*SLFSFA
Trigger: AGCGAAAGAAAATAAAGAGCAGTAGAGTCCCTGTGG...GGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR TCA 90 bp TGCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATaGTGGGAAAAACACAGTTCA +
Preference number: 4 (lower is better)
Translates to: CRCKTEASFDIFRTIAAHSLLPS*WEKHSS
Trigger: TGAACTGTGTTTTTCCCATCATGACGGAAGAAGAGA...GTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR TCA 90 bp CGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATAACAGAAGCCTCGTTTaGCATTTTCAGAACAATTGC +
Preference number: 4 (lower is better)
Translates to: RHDGKNTVQEQMLAGMTHNRSLV*HFQNNC
Trigger: GCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTT...ATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR TCA 90 bp CAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATATCAGAAAACCAACTCGGTaGTCTGCAGGTGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: QEVLSLLLKSAGKQNGYIRKPTR*SAGAKQ
Trigger: CTGTTTTGCACCTGCAGATCACCGAGTTGGTTTTCT...GATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp GTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATATCAGGGAGAGAAGTTATTGCCATTaGTGTGTGTCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLSLLLKSAGKQNGYIRERSYCH*CVSHRQ
Trigger: CTGCCTGTGTGACACACATCAATGGCAATAACTTCT...CTCCCTGATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCACTTTCTCATACAACTaGTGCCCTTGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KQKPRLTFSEQLRLTLFFTFSYN*CPCRKQ
Trigger: CTGCTTCCTGCAAGGGCACCAGTTGTATGAGAAAGT...GAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp GCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTACTTCTGCGAGGAGTTaGAAGAAGTTATTGCCATTG +
Preference number: 4 (lower is better)
Translates to: AGAKQKPRLTFSEQLRLTTSARS*KKLLPL
Trigger: CAATGGCAATAACTTCTTCCAACTCCTCGCAGAAGT...AGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
3UTR CAA 72 bp GCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATaGCGGCTCACTCTCTTCTTCCGTCATGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: AKQKPRLTFSEQ*RLTLFFRHDGK
Trigger: TTTCCCATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CCA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAAACTCCTAAAAAGTGCTaGGAAGCAAAATGGATATAT +
Preference number: 4 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQETPKKC*EAKWIY
Trigger: ATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGT...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CCA 90 bp AAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCAACGGTCATACAAAGTaGTCTAGGGACCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: KQKPRLTFSEQLRLTLFFNGHTK*SRDQQK
Trigger: TTTTTGCTGGTCCCTAGACCACTTTGTATGACCGTT...GAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR TCA 90 bp CAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATATCAACAGAAGCCTCGTTTaGCATTTTCAGAACAATTGC +
Preference number: 4 (lower is better)
Translates to: QEVLSLLLKSAGKQNGYINRSLV*HFQNNC
Trigger: GCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTT...GATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR GCA 90 bp AAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTACTACTCCTAAAAAGTaGTGGGAAGCAAAATGGATA +
Preference number: 4 (lower is better)
Translates to: KTEASFDIFRTIAAHSLLTTPKK*WEAKWI
Trigger: TATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGT...AAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS TCA 90 bp GGGCGGCTCTTCCTCGCTCGGGGCTGTGGCGCCGGCCCGAAAAGTTaGAGCGAGAAGCATGAACTTTCCGCTTCTTGGGCCAGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: GRLFLARGCGAGPKS*SEKHELSASWARPD
Trigger: GTCCGGCCTGGCCCAAGAAGCGGAAAGTTCATGCTTCTCGCTTCAACTTTTCGGGCCGGCGCCACAGCCCCGAGCGAGGAAGAGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS GCA 90 bp AGCTGGGCCCTGCAAAGGCAGTTTCCTCCCGGGTCTTGGAAAGGCTaGTGGCGACCTCCAAAGAAAGGAGCCAGAAGAGCGCACGCAGGG +
Preference number: 5 (lower is better)
Translates to: SWALQRQFPPGSWKG*WRPPKKGARRAHAG
Trigger: CCCTGCGTGCGCTCTTCTGGCTCCTTTCTTTGGAGGTCGCCAGCAGCCTTTCCAAGACCCGGGAGGAAACTGCCTTTGCAGGGCCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS-3UTR CAA 90 bp ACTCGATCCCAAGGTTGCCACGACAGCCTTGTCCCCACCATGCAAGTCACCTCCGACAGCAGAGGTCCCTaGCCATGCCTCCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TRSQGCHDSLVPTMQVTSDSRGP*PCLPSA
Trigger: GGCAGAAGGGAGGCATGGCAAGGGACCTCTGCTGTC...GGAGGTGACTTGCATGGTGGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGTGCTGCGTGCCTTGGTaGGCCGAGTTTAGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: NRPRSPMGREYCSWADWRCCVPW*AEFSSR
Trigger: CCTTGAGCTAAACTCGGCCAACCAAGGCACGCAGCA...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS TCA 90 bp ACGGGTCTGGGAAGATCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCATCACCTCAG +
Preference number: 5 (lower is better)
Translates to: TGLGRSGRKGHPCGG*GRSPPWAGCSSSPQ
Trigger: CTGAGGTGATGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGATCTTCCCAGACCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395323.9
ENST00000401506.1
ENST00000407930.2
ENST00000467242.1
ENST00000484150.1
CDS TCA 90 bp CAGAGCGAGACTCCATCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCATCACCTCAG +
Preference number: 5 (lower is better)
Translates to: QSETPSGRKGHPCGG*GRSPPWAGCSSSPQ
Trigger: CTGAGGTGATGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGATGGAGTCTCGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464412.5
CDS TCA 90 bp CGCCTGTATTCCCAGCTACTCCGGAGACTGAGGCAGAAAATGGTGTaGACCCGGGAGGCGGAGCTTGTGGTGAGCCGAGATCACGCCACT +
Preference number: 5 (lower is better)
Translates to: RLYSQLLRRLRQKMV*TREAELVVSRDHAT
Trigger: AGTGGCGTGATCTCGGCTCACCACAAGCTCCGCCTCCCGGGTTCACACCATTTTCTGCCTCAGTCTCCGGAGTAGCTGGGAATACAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464412.5
CDS-3UTR CAA 90 bp AACAGACCAAGATCCCCCATGGGGCGTGAGTACTGCAGCTGGGCAGACTGGCGGTGTTCCTTGCTTGCTTaGCACATGCCCCACCTCCCA +
Preference number: 5 (lower is better)
Translates to: NRPRSPMGREYCSWADWRCSLLA*HMPHLP
Trigger: TGGGAGGTGGGGCATGTGCAAAGCAAGCAAGGAACA...CCGCCAGTCTGCCCAGCTGCAGTACTCACGCCCCATGGGGGATCTTGGTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS TCA 90 bp GTCTGGGAAGATTCACCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCATCACCTCAG +
Preference number: 5 (lower is better)
Translates to: VWEDSPGRKGHPCGG*GRSPPWAGCSSSPQ
Trigger: CTGAGGTGATGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGGTGAATCTTCCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS CCA 90 bp CTAACAGAAGATGCGGGGCTTTGCGGCAAGTTTAGGTTCGGGAGCTaGGCCCTGCAAAGGCAGTTTCCTCCCGGGTCTTGGAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LTEDAGLCGKFRFGS*ALQRQFPPGSWKGC
Trigger: GCAGCCTTTCCAAGACCCGGGAGGAAACTGCCTTTGCAGGGCCCAGCTCCCGAACCTAAACTTGCCGCAAAGCCCCGCATCTTCTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS-3UTR CAA 90 bp AACTCGATCCCAAGGTTGCCACGACAGCCTTGTCCCCACCATGCAAGTCACCTCGGGTGCCGGCGACCATaGGCTTCCCAGAACGGAATT +
Preference number: 5 (lower is better)
Translates to: NSIPRLPRQPCPHHASHLGCRRP*ASQNGI
Trigger: AATTCCGTTCTGGGAAGCCAATGGTCGCCGGCACCC...GAGGTGACTTGCATGGTGGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS TCA 90 bp AGGGTTCTTCACAATCCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCATCACCTCAG +
Preference number: 5 (lower is better)
Translates to: RVLHNPGRKGHPCGG*GRSPPWAGCSSSPQ
Trigger: CTGAGGTGATGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGGATTGTGAAGAACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR CAA 90 bp CTGACTGGAGACCTGAGGGGACATGCTGCGTGCCTTGGTTGGCCGAGTTTAGCTCTCTTCGCAGTTATCTaGCTCATCCTCCTGGACCAG +
Preference number: 5 (lower is better)
Translates to: LTGDLRGHAACLGWPSLALFAVI*LILLDQ
Trigger: CTGGTCCAGGAGGATGAGCAAGATAACTGCGAAGAG...AGCTAAACTCGGCCAACCAAGGCACGCAGCATGTCCCCTCAGGTCTCCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS GCA 90 bp CTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTaGAGCAGCGGTCAAAATCTGACGGGTCTGGGAAGATCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: LLWVPPLWRADGPSV*SSGQNLTGLGRSGR
Trigger: CCTACCAGATCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395323.9
ENST00000401506.1
ENST00000407930.2
ENST00000467242.1
ENST00000484150.1
CDS GCA 90 bp CTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTaGAGCAGCGGTCAAAATCTGACGGGTCTGGGAAGATTCACCTGG +
Preference number: 5 (lower is better)
Translates to: LLWVPPLWRADGPSV*SSGQNLTGLGRFTW
Trigger: CCAGGTGAATCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS GCA 90 bp GCCTCCAACAGCCTTCAAAGCTTCACCTATAATAAGGCACCTAGCTaGTCACACACCACGGGAGAGGCAAGGGAGGGGCACCCACAAGAA +
Preference number: 5 (lower is better)
Translates to: ASNSLQSFTYNKAPS*SHTTGEAREGHPQE
Trigger: TTCTTGTGGGTGCCCCTCCCTTGCCTCTCCCGTGGTGTGTGAGCAGCTAGGTGCCTTATTATAGGTGAAGCTTTGAAGGCTGTTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS-3UTR CAA 90 bp AACTCGATCCCAAGGTTGCCACGACAGCCTTGTCCCCACCATGCAAGTCACCTCCTTTCTCAGAGGGCCTaGCAAATTGTCAGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: NSIPRLPRQPCPHHASHLLSQRA*QIVRGL
Trigger: GAGCCCTCTGACAATTTGCAAGGCCCTCTGAGAAAG...GAGGTGACTTGCATGGTGGGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp ACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACAAAGTGGACCCACCAAGACCCATaGGAATCCCACCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: TLAVSPWPAQTANGHTKWTHQDP*ESHHCL
Trigger: GAGGCAGTGGTGGGATTCCAATGGGTCTTGGTGGGT...CCACTTTGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp GTCCTGACATTAGCTGTCAGCCCCTGGCCTGCTCAGACTGCAAACGGTCATACATCTCGGGAGCAAGTCTaGGAAGGGCAGCAGTTAAGG +
Preference number: 5 (lower is better)
Translates to: VLTLAVSPWPAQTANGHTSREQV*EGQQLR
Trigger: CCTTAACTGCTGCCCTTCCAAGACTTGCTCCCGAGA...TGTATGACCGTTTGCAGTCTGAGCAGGCCAGGGGCTGACAGCTAATGTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp TCATGGCTGAGAGGTGCTAATTGGTTCACACGCTGTTTTCCAAGATGTGAGCTGCAGGGGCTGGGCAGGTaGGCCCTATGTGGTCCCATC +
Preference number: 5 (lower is better)
Translates to: SWLRGANWFTRCFPRCELQGLGR*ALCGPI
Trigger: GATGGGACCACATAGGGCCAACCTGCCCAGCCCCTG...CAGCTCACATCTTGGAAAACAGCGTGTGAACCAATTAGCACCTCTCAGCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS-3UTR CAA 90 bp CTCCCCTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTTGCAAGACGGTCCTTCAGTTaGCAGCAGCGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: LPFCGFHHYGGQTVLQFARRSFS*QQRSKS
Trigger: AGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCT...TGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406087.5
ENST00000412933.5
CDS-3UTR CAA 90 bp ATGGAGGGCAGACGGTCCTTCAGTTTGCAGCAGCGGTCAAAATCTGACGGGTCTAGACGGTCCTTCAGTTaGCAGCAGCGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: MEGRRSFSLQQRSKSDGSRRSFS*QQRSKS
Trigger: AGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCT...AGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412933.5
CDS-3UTR CAA 90 bp GGGCTTCCAACAAGGGCAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAAGAGGGCCTTGCAAATaGTCAGAGGGCTCCACTGCT +
Preference number: 5 (lower is better)
Translates to: GLPTRAGSALTTPKKCWERGPCK*SEGSTA
Trigger: AGCAGTGGAGCCCTCTGACAATTTGCAAGGCCCTCT...TTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTGCCCTTGTTGGAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp CGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATCACCTCCAGCTGGCTTaGCAGGCAGCCAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: RHDGKNTVQEQMLAGMTHHLQLA*QAANCS
Trigger: GGAGCAATTGGCTGCCTGCAAAGCCAGCTGGAGGTG...ATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp CATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGGTTGCCACGACAGCCTaGTCCCCACCATGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: HDGKNTVQEQMLAGMTHGVATTA*SPPCKS
Trigger: TGACTTGCATGGTGGGGACAAGGCTGTCGTGGCAAC...CCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp CATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAACTCGATCCCAAGGTaGCCACGACAGCCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: HDGKNTVQEQMLAGMTHGNSIPR*PRQPCP
Trigger: GGGACAAGGCTGTCGTGGCAACCTTGGGATCGAGTT...CCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp CGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATGATGGGGCCTCCCTTCTGCCCTaGTCCGGGAACAACATGGGG +
Preference number: 5 (lower is better)
Translates to: RLTFSEQLRLTLFFRHDGASLLP*SGNNMG
Trigger: CCCCATGTTGTTCCCGGACAAGGGCAGAAGGGAGGC...CCCATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp GGGCTTCCAACAAGGGCAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAAGACGGTCCTTCAGTTaGCAGCAGCGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: GLPTRAGSALTTPKKCWERRSFS*QQRSKS
Trigger: AGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCT...TTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTGCCCTTGTTGGAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp CCACTGTTGAGTAAGGACAGCAGAGGTCCCTTGCCATGCCTCCCTTCTGCCCTTACATTTTCAGAACAATaGCGGCTCACTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PLLSKDSRGPLPCLPSALTFSEQ*RLTLFF
Trigger: GAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGT...AAGGGCAGAAGGGAGGCATGGCAAGGGACCTCTGCTGTCCTTACTCAACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS GCA 90 bp TCATCATCACCTCAGTCATCTTGGCCGATCTCAGATAGTCGGGGCTaGCAAGAAACCCAGACCAAAAGTCAACAAACACACGCGCTTTCA +
Preference number: 5 (lower is better)
Translates to: SSSPQSSWPISDSRG*QETQTKSQQTHALS
Trigger: TGAAAGCGCGTGTGTTTGTTGACTTTTGGTCTGGGTTTCTTGGCAGCCCCGACTATCTGAGATCGGCCAAGATGACTGAGGTGATGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484150.1
CDS GCA 90 bp CCAAAAGTCAACAAACACACGCGCTTTCACATTCCTAACTCTTCATaGATTCACTGCTGTGGGATCAGGGGACTGTCTGGAGACAGGAAG +
Preference number: 5 (lower is better)
Translates to: PKVNKHTRFHIPNSS*IHCCGIRGLSGDRK
Trigger: CTTCCTGTCTCCAGACAGTCCCCTGATCCCACAGCAGTGAATGCATGAAGAGTTAGGAATGTGAAAGCGCGTGTGTTTGTTGACTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484150.1
CDS-3UTR CAA 90 bp CGTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATAGACGGTCCTTCAGTTaGCAGCAGCGGTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: RHDGKNTVQEQMLAGMTHRRSFS*QQRSKS
Trigger: AGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCT...ATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CAA 90 bp AAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAGTCCACAGGGACATTTTCAGAACAATaGCGGCTCACTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: KHSSGTDAGWYDPWESTGTFSEQ*RLTLFF
Trigger: GAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGT...CCCTGTGGACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CAA 90 bp CCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCGTCATGATATACAACTGGTGCCCTaGCAGGAAGCAGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: PRLTFSEQLRLTLFFRHDIQLVP*QEAVGG
Trigger: ACCTCCCACTGCTTCCTGCAAGGGCACCAGTTGTAT...ATCATGACGGAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS CCA 90 bp TGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATaGGAGTCCACAGGGACTCTACTGCTCTTTATTTTCTTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: WEKHSSGTDAGWYDP*ESTGTLLLFIFFRC
Trigger: ACAGCGAAAGAAAATAAAGAGCAGTAGAGTCCCTGTGGACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395323.9
ENST00000401506.1
ENST00000467242.1
ENST00000484150.1
CDS-3UTR CAA 90 bp TCTGCAGGTGCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCTACCCCAAATGTTCCTaGCTTGCTTTGCACATGCCC +
Preference number: 5 (lower is better)
Translates to: SAGAKQKPRLTFSEQLRLYPKCS*LALHMP
Trigger: GGGCATGTGCAAAGCAAGCAAGGAACATTTGGGGTA...GAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp CAGGAAGTGCTCTCACTACTCCTAAAAAGTGCTGGGAAGCAAAATGGATATATCGGCGGACTGAAGCATTaGTCCTGCAACCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: QEVLSLLLKSAGKQNGYIGGLKH*SCNLLL
Trigger: AAGCAGCAGGTTGCAGGACAAATGCTTCAGTCCGCC...GATATATCCATTTTGCTTCCCAGCACTTTTTAGGAGTAGTGAGAGCACTTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS TCA 90 bp GTCATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATaGCCCATGGGAGTCCACAGGGACTCTACTGCTCTTTATTTTCTT +
Preference number: 5 (lower is better)
Translates to: VMMGKTQFRNRCWLV*PMGVHRDSTALYFL
Trigger: AAGAAAATAAAGAGCAGTAGAGTCCCTGTGGACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395323.9
ENST00000401506.1
ENST00000467242.1
ENST00000484150.1
CDS-3UTR CAA 90 bp CCCAACAAGACACATAAAAAGCCACGTCTGCTCTCCACTAGGCTCCCACAAGAAAAGAAGTTATTGCCATaGATGTGTGTCACACAGGCA +
Preference number: 5 (lower is better)
Translates to: PNKTHKKPRLLSTRLPQEKKLLP*MCVTQA
Trigger: TGCCTGTGTGACACACATCAATGGCAATAACTTCTT...TTCTTGTGGGAGCCTAGTGGAGAGCAGACGTGGCTTTTTATGTGTCTTGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp AAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCTGCCGGCCTCGACGTaGAGACTTGCATGCAAACAA +
Preference number: 5 (lower is better)
Translates to: KTEASFDIFRTIAAHSLLLPAST*RLACKQ
Trigger: TTGTTTGCATGCAAGTCTCAACGTCGAGGCCGGCAG...AAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401506.1
CDS-3UTR CAA 90 bp AAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCCAAATGTTCCTTGCTaGCTTTGCACATGCCCCACC +
Preference number: 5 (lower is better)
Translates to: KTEASFDIFRTIAAHSLLPNVPC*LCTCPT
Trigger: GGTGGGGCATGTGCAAAGCAAGCAAGGAACATTTGG...AAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp CATGATGGGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATGACCCATGGGAAACAGAAGCCTCGTTaGACATTTTCAGAACAATTG +
Preference number: 5 (lower is better)
Translates to: HDGKNTVQEQMLAGMTHGKQKPR*TFSEQL
Trigger: CAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTT...CCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCCCATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS-3UTR CAA 90 bp TGGAAGAAGTTATTGCCATTGATGTGTGTCACACAGGCAGACAACAGAGGGAGGAGTTGGAAGAAGTTATaGCCATTGATGTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: WKKLLPLMCVTQADNRGRSWKKL*PLMCVT
Trigger: TGTGACACACATCAATGGCAATAACTTCTTCCAACT...CCTCCCTCTGTTGTCTGCCTGTGTGACACACATCAATGGCAATAACTTCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp GCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCCACTTCTGCGAGGAGTaGGAAGAAGTTATTGCCATT +
Preference number: 5 (lower is better)
Translates to: AKQKPRLTFSEQLRLTLFHFCEE*EEVIAI
Trigger: AATGGCAATAACTTCTTCCAACTCCTCGCAGAAGTG...GAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp AAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCTTCAGAGAGATGAAGACTTaGTTTTCTGATGTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: KQKPRLTFSEQLRLTLFFREMKT*FSDVPA
Trigger: TGCTGGGACATCAGAAAACAAAGTCTTCATCTCTCT...GAAGAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395323.9
CDS-3UTR CAA 90 bp GCAAAACAGAAGCCTCGTTTGACATTTTCAGAACAATTGCGGCTCACTCTCTTCAAACAGAAGCCTCGTTaGACATTTTCAGAACAATTG +
Preference number: 5 (lower is better)
Translates to: AKQKPRLTFSEQLRLTLFKQKPR*TFSEQL
Trigger: CAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTT...GAAGAGAGTGAGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395323.9
ENST00000401506.1
CDS GCA 72 bp TCCGCTTCTTGGGCCAGGCCGGACCCCGCCGCGGCTTaGGCCGGTTTTCCCTTCGCTCAGCGCCTGCCGGAG +
Preference number: 6 (lower is better)
Translates to: SASWARPDPAAA*AGFPFAQRLPE
Trigger: CTCCGGCAGGCGCTGAGCGAAGGGAAAACCGGCGCAAGCCGCGGCGGGGTCCGGCCTGGCCCAAGAAGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS CAA 72 bp TTCCGCTTCTTGGGCCAGGCCGGACCCCGCCGCGGCTaGCGCCGGTTTTCCCTTCGCTCAGCGCCTGCCGGA +
Preference number: 6 (lower is better)
Translates to: FRFLGQAGPRRG*RRFSLRSAPAG
Trigger: TCCGGCAGGCGCTGAGCGAAGGGAAAACCGGCGCAAGCCGCGGCGGGGTCCGGCCTGGCCCAAGAAGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS TCA 72 bp CTGTGGCGCCGGCCCGAAAAGTTGAAGCGAGAAGCATaGACTTTCCGCTTCTTGGGCCAGGCCGGACCCCGC +
Preference number: 6 (lower is better)
Translates to: LWRRPEKLKREA*TFRFLGQAGPR
Trigger: GCGGGGTCCGGCCTGGCCCAAGAAGCGGAAAGTTCATGCTTCTCGCTTCAACTTTTCGGGCCGGCGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS CCA 72 bp GATGCGGGGCTTTGCGGCAAGTTTAGGTTCGGGAGCTaGGCCCTGCAAAGGCAGTTTCCTCCCGGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: DAGLCGKFRFGS*ALQRQFPPGSW
Trigger: CCAAGACCCGGGAGGAAACTGCCTTTGCAGGGCCCAGCTCCCGAACCTAAACTTGCCGCAAAGCCCCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS TCA 72 bp TTCCTCGCTCGGGGCTGTGGCGCCGGCCCGAAAAGTTaGAGCGAGAAGCATGAACTTTCCGCTTCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: FLARGCGAGPKS*SEKHELSASWA
Trigger: GGCCCAAGAAGCGGAAAGTTCATGCTTCTCGCTTCAACTTTTCGGGCCGGCGCCACAGCCCCGAGCGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS TCA 72 bp AGAAAATGGTGTGAACCCGGGAGGCGGAGCTTGTGGTaGGCCGAGATCACGCCACTGGACTCCAGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: RKWCEPGRRSLW*AEITPLDSSLG
Trigger: GCCCAGACTGGAGTCCAGTGGCGTGATCTCGGCTCACCACAAGCTCCGCCTCCCGGGTTCACACCATTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464412.5
CDS TCA 72 bp GGAAGATCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCA +
Preference number: 6 (lower is better)
Translates to: GRSGRKGHPCGG*GRSPPWAGCSS
Trigger: TGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395323.9
ENST00000401506.1
ENST00000407930.2
ENST00000467242.1
ENST00000484150.1
CDS TCA 72 bp CACAATCCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCA +
Preference number: 6 (lower is better)
Translates to: HNPGRKGHPCGG*GRSPPWAGCSS
Trigger: TGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGGATTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404397.5
CDS TCA 72 bp GATTCACCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCA +
Preference number: 6 (lower is better)
Translates to: DSPGRKGHPCGG*GRSPPWAGCSS
Trigger: TGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGGTGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS TCA 72 bp ACTCCATCTGGTAGGAAAGGCCATCCTTGCGGGGGCTaGGGCCGATCTCCTCCATGGGCTGGGTGTTCATCA +
Preference number: 6 (lower is better)
Translates to: TPSGRKGHPCGG*GRSPPWAGCSS
Trigger: TGATGAACACCCAGCCCATGGAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCAGATGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464412.5
CDS TCA 72 bp TCCCAGCTACTCCGGAGACTGAGGCAGAAAATGGTGTaGACCCGGGAGGCGGAGCTTGTGGTGAGCCGAGAT +
Preference number: 6 (lower is better)
Translates to: SQLLRRLRQKMV*TREAELVVSRD
Trigger: ATCTCGGCTCACCACAAGCTCCGCCTCCCGGGTTCACACCATTTTCTGCCTCAGTCTCCGGAGTAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464412.5
CDS CAA 90 bp CCTTCTGTGGGTTCCACCACTATGGAGGGCAGACGGTCCTTCAGTTaGCAGCAGCGGTCAAAATCTGACGGGTCTGGGAAGATTCACCTG +
Preference number: 6 (lower is better)
Translates to: PSVGSTTMEGRRSFS*QQRSKSDGSGKIHL
Trigger: CAGGTGAATCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS GCA 72 bp AGCCTTCAAAGCTTCACCTATAATAAGGCACCTAGCTaGTCACACACCACGGGAGAGGCAAGGGAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: SLQSFTYNKAPS*SHTTGEAREGH
Trigger: GTGCCCCTCCCTTGCCTCTCCCGTGGTGTGTGAGCAGCTAGGTGCCTTATTATAGGTGAAGCTTTGAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467242.1
CDS TCA 72 bp CAGACGGTCCTTCAGTTTGCAGCAGCGGTCAAAATCTaGCGGGTCTGGGAAGATCTGGTAGGAAAGGCCATC +
Preference number: 6 (lower is better)
Translates to: QTVLQFAAAVKI*RVWEDLVGKAI
Trigger: GATGGCCTTTCCTACCAGATCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395323.9
ENST00000401506.1
ENST00000407930.2
ENST00000467242.1
ENST00000484150.1
CDS TCA 72 bp CAGACGGTCCTTCAGTTTGCAGCAGCGGTCAAAATCTaGCGGGTCTGGGAAGATTCACCTGGTAGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: QTVLQFAAAVKI*RVWEDSPGRKG
Trigger: GCCTTTCCTACCAGGTGAATCTTCCCAGACCCGTCAGATTTTGACCGCTGCTGCAAACTGAAGGACCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406087.5
CDS TCA 72 bp GGAAAAACACAGTTCAGGAACAGATGCTGGCTGGTATaGCCCATGGGAGTCCACAGGGACTCTACTGCTCTT +
Preference number: 6 (lower is better)
Translates to: GKTQFRNRCWLV*PMGVHRDSTAL
Trigger: AAGAGCAGTAGAGTCCCTGTGGACTCCCATGGGTCATACCAGCCAGCATCTGTTCCTGAACTGTGTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395323.9
ENST00000401506.1
ENST00000467242.1
ENST00000484150.1
CDS GCA 72 bp ACGCGCTTTCACATTCCTAACTCTTCATGCATTCACTaGTGTGGGATCAGGGGACTGTCTGGAGACAGGAAG +
Preference number: 6 (lower is better)
Translates to: TRFHIPNSSCIH*CGIRGLSGDRK
Trigger: CTTCCTGTCTCCAGACAGTCCCCTGATCCCACAGCAGTGAATGCATGAAGAGTTAGGAATGTGAAAGCGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484150.1
CDS GCA 72 bp CCTCAGTCATCTTGGCCGATCTCAGATAGTCGGGGCTaGCAAGAAACCCAGACCAAAAGTCAACAAACACAC +
Preference number: 6 (lower is better)
Translates to: PQSSWPISDSRG*QETQTKSQQTH
Trigger: GTGTGTTTGTTGACTTTTGGTCTGGGTTTCTTGGCAGCCCCGACTATCTGAGATCGGCCAAGATGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484150.1
CDS GCA 72 bp AACAAACACACGCGCTTTCACATTCCTAACTCTTCATaGATTCACTGCTGTGGGATCAGGGGACTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: NKHTRFHIPNSS*IHCCGIRGLSG
Trigger: TCCAGACAGTCCCCTGATCCCACAGCAGTGAATGCATGAAGAGTTAGGAATGTGAAAGCGCGTGTGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484150.1