RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAYN (Homo sapiens)

Ensembl gene IDs: ENSG00000204381

Ensembl transcript IDs: ENST00000375614.7, ENST00000375615.7, ENST00000436913.6, ENST00000525126.5, ENST00000525866.5, ENST00000528102.2, ENST00000528924.4, ENST00000530962.5, ENST00000533265.5, ENST00000533999.5

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTC +
Preference number: 1 (lower is better)
Translates to: TWARYLLIRSSWMTG*DKGYSQNVGVQQEV
Trigger: GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR CCA 90 bp CCTTACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTaGTCACAAATCCACTCTCCACGCTCACCAGAGTCACAAACCCAC +
Preference number: 1 (lower is better)
Translates to: PYSSPFGLGRTHKCH*SQIHSPRSPESQTH
Trigger: GTGGGTTTGTGACTCTGGTGAGCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR TCA 90 bp CACAAATCCACTCTCCACGCTCACCAGAGTCACAAACCCACTTTCTaGTGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATC +
Preference number: 1 (lower is better)
Translates to: HKSTLHAHQSHKPTF*WVHSHVVIVTRHVI
Trigger: GATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAGTGGATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR CCA 90 bp GGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGGAGTaGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTG +
Preference number: 1 (lower is better)
Translates to: GSQPCCHSHKTCHRE*LLPNTLGMKYSSGL
Trigger: CAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR CCA 90 bp CTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAA +
Preference number: 1 (lower is better)
Translates to: LYDNMCCCIEQGKQR*FSKLHSPSLSLPGK
Trigger: TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTGCTCTATACAGCAGCACATATTATCATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR CCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTaGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAA +
Preference number: 1 (lower is better)
Translates to: AQASLCYHMWALKRF*IFCLYDNMCCCIEQ
Trigger: TTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR TCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGGGGCTGTTTCCCTGGTaGGGAGAGGGCCAGATGGTG +
Preference number: 2 (lower is better)
Translates to: ADAQASLCYHMWALKRFWGLFPW*GEGQMV
Trigger: CACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGGTGATCCTAGCTCACTaGAGCCTCAACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: ADAQASLCYHMWALKRFWVILAH*SLNLLG
Trigger: GCCCAGGAGGTTGAGGCTGCAGTGAGCTAGGATCAC...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
3UTR-3UTR GCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 2 (lower is better)
Translates to: ADAQASLCYHMWALKRFWVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp GGAGTGGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGTCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: GVASPEHTRNEIFFRSGRSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...CCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: TDMRIADAQASLCYHMWASNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
3UTR-3UTR CCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGACATGTCATCGGGAGTaGCTTCTCCCGAACACACTC +
Preference number: 2 (lower is better)
Translates to: ADAQASLCYHMWALKRFWTCHRE*LLPNTL
Trigger: GAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGT...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 2 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp ATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCTATGAGAATTGCCGATaGACAGGCCAGCCTGTGCTA +
Preference number: 2 (lower is better)
Translates to: MTGWDKGYSQNVGVQQEVYENCR*TGQPVL
Trigger: TAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATA...GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCTCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATGATACAGCCAAAACGTaGGGGTCCAACAGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDDTAKT*GSNRRS
Trigger: CGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATC...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR TCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGAAGGTCTGGAACTCCTaGACTCAAGCTATCCTCCAA +
Preference number: 2 (lower is better)
Translates to: ADAQASLCYHMWALKRFWKVWNS*TQAILQ
Trigger: TTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTT...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
3UTR-3UTR GCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 2 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGAGCCCATCTTTATCACTaGCAGGTAAAGCTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGAHLYH*QVKLCP
Trigger: GGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGC...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQENRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
3UTR-3UTR CCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCGATACAGCCAAAACGTaGGGGTCCAACAGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: AQASLCYHMWALKRFWIFDTAKT*GSNRRS
Trigger: CGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATC...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 2 (lower is better)
Translates to: ADAQASLCYHMWALKRFWSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 2 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQELIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp ATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: MTGWDKGYSQNVGVQQEVQGKQR*FSKLHS
Trigger: GCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTG...GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGCTTTGTGCTAGGGTCTaGCTGCTCCCGTTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: ADAQASLCYHMWALKRFWLCARV*LLPFSF
Trigger: AAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAG...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR-3UTR TCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGACACAAACCCACTTTCTaGTGGGTTCACAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGHKPTF*WVHSHV
Trigger: AACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTG...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTTCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTGATACAGCCAAAACGTaGGGGTCCAACAGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSDTAKT*GSNRRS
Trigger: CGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATC...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGATACAGCCAAAACGTaGGGGTCCAACAGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKDTAKT*GSNRRS
Trigger: CGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATC...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 2 (lower is better)
Translates to: TDMRIADAQASLCYHMWASWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
3UTR-3UTR CCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 2 (lower is better)
Translates to: TDMRIADAQASLCYHMWALIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
3UTR-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGGAGAAGGGGAATGCTaGGGATTAGGATGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQGEGEC*GLGCRP
Trigger: TGGCCTACATCCTAATCCCCAGCATTCCCCTTCTCC...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR-3UTR TCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGACTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGA +
Preference number: 2 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGLIHRT*SKLVHR
Trigger: TCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAG...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYNRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
3UTR-3UTR GCA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCGGAGGAGAAGGGGAATaGTGGGGATTAGGATGTAGG +
Preference number: 2 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPRGGEGE*WGLGCR
Trigger: CCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCC...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR-3UTR CCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGTTCCTGTGTTTCTTCTaGAAGTACAGGTGTTGTCAG +
Preference number: 2 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEFLCFF*KYRCCQ
Trigger: CTGACAACACCTGTACTTCCAGAAGAAACACAGGAA...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR-3UTR TCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGA +
Preference number: 2 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSLIHRT*SKLVHR
Trigger: TCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAG...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR TCA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATCTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGA +
Preference number: 2 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDLIHRT*SKLVHR
Trigger: TCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAG...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 2 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
3UTR-3UTR GCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKNRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
3UTR-3UTR GCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTAGGGTCTCATTCTGTTaGCCACGCAGGAGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPRVSFC*PRRRAV
Trigger: CACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCT...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
3UTR-3UTR CCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 2 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: AQASLCYHMWALKRFWIFQGKQR*FSKLHS
Trigger: GCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTG...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAACCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTC +
Preference number: 2 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKPPHLV*GELINV
Trigger: GACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR TCA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTAACATACAACTGTGGTaGCCACAAGGAGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSNIQLW*PQGGGE
Trigger: TTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTT...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR-3UTR GCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGCTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQELYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 2 (lower is better)
Translates to: QASLCYHMWALKRFWIFCSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 2 (lower is better)
Translates to: QASLCYHMWALKRFWIFCLIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp TCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 2 (lower is better)
Translates to: SPESQTHFLMGSQPCCHSLIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTGAGGAGAGGGCCAGATaGTGTGTTGCTTCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPEERAR*CVASLC
Trigger: GCACAAAGAAGCAACACACCATCTGGCCCTCTCCTC...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR-3UTR TCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGCTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGA +
Preference number: 2 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLLIHRT*SKLVHR
Trigger: TCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAG...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR TCA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCCGAACACACTCGGAATaGAATATTCTTCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPRRTHSE*NILQVW
Trigger: CCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCG...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR TCA 90 bp TCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCGAACACACTCGGAATaGAATATTCTTCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: SPESQTHFLMGSQPCCHSRTHSE*NILQVW
Trigger: CCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCG...ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp AGAGTCTCACTATTTTGCCCAGGAAGGTCTGGAACTCCTGAACTCAAGCTATCCCTGTGCTACCATATGTaGGCTTTGAAAAGATTCTGG +
Preference number: 2 (lower is better)
Translates to: RVSLFCPGRSGTPELKLSLCYHM*ALKRFW
Trigger: CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAG...GGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
3UTR-3UTR CCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTACTCATAAATGTCATTaGTCACAAATCCACTCTCCA +
Preference number: 2 (lower is better)
Translates to: TDMRIADAQASLCYHMWATHKCH*SQIHSP
Trigger: TGGAGAGTGGATTTGTGACCAATGACATTTATGAGT...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000525866.5
3UTR CAA 90 bp AGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTaGAAAAGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGC +
Preference number: 2 (lower is better)
Translates to: RIADAQASLCYHMWA*KRFWIFCLYDNMCC
Trigger: GCAGCACATATTATCATACAGACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAACTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAAGATACAGCCAAAACGTaGGGGTCCAACAGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKDTAKT*GSNRRS
Trigger: CGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATC...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR GCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAACTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CCA 90 bp GCTGGTGATTTAAATAATGGCTTTCAGACCTCCAATGTGTATATGATTGATGCTCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 2 (lower is better)
Translates to: AGDLNNGFQTSNVYMIDALIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...AGCATCAATCATATACACATTGGAGGTCTGAAAGCCATTATTTAAATCACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
3UTR CAA 90 bp AATGTGTATATGATTGATGCTGGGCTGAGAAACTTTTCTCTGAATTaGAGGCCAAACACAATTGAAACAATGAGGTCTGTCAACAAAAGG +
Preference number: 2 (lower is better)
Translates to: NVYMIDAGLRNFSLN*RPNTIETMRSVNKR
Trigger: CCTTTTGTTGACAGACCTCATTGTTTCAATTGTGTTTGGCCTCAAATTCAGAGAAAAGTTTCTCAGCCCAGCATCAATCATATACACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
3UTR-3UTR TCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAACCAAGTGACATTTATTaGGACTCTACTATGTGCCAG +
Preference number: 2 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKPSDIY*DSTMCQ
Trigger: CTGGCACATAGTAGAGTCTCAATAAATGTCACTTGG...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR GCA 72 bp AACGTGGGGGTCCAACAGGAGGTCGTGGGGACCACATaGTCATCCACAGGACCTGATCTAAGCTTGTTCATA +
Preference number: 3 (lower is better)
Translates to: NVGVQQEVVGTT*SSTGPDLSLFI
Trigger: TATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGACCCCCACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp TCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTCTGGAAGTACAGGTGTaGTCAGCTCTGTTTCCTCAC +
Preference number: 3 (lower is better)
Translates to: SPEHTRNEIFFRSGRVSALEVQV*SALFPH
Trigger: GTGAGGAAACAGAGCTGACAACACCTGTACTTCCAG...AGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR CCA 72 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAAAACGTGGGGGTCCAA +
Preference number: 3 (lower is better)
Translates to: RYLLIRSSWMTG*DKGYSQNVGVQ
Trigger: TTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR CCA 72 bp CAGACCTGGGCAAGGTACCTTCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAAGGATACAGCCAAAAC +
Preference number: 3 (lower is better)
Translates to: QTWARYLLIRSS*MTGWDKGYSQN
Trigger: GTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCAGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 3 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTGGGCCAGATGGTGTGTaGCTTCTTTGTGCTAGGGTC +
Preference number: 3 (lower is better)
Translates to: QASLCYHMWALKRFWIFCGPDGV*LLCARV
Trigger: GACCCTAGCACAAAGAAGCAACACACCATCTGGCCC...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR CCA 72 bp GGGCCAGATGGTGTGTTGCTTCTTTGTGCTAGGGTCTaGCTGCTCCCGTTTTCTTTTTCTACAGATCCAAAC +
Preference number: 3 (lower is better)
Translates to: GPDGVLLLCARV*LLPFSFSTDPN
Trigger: GTTTGGATCTGTAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAGAAGCAACACACCATCTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525866.5
3UTR TCA 72 bp GGAGGTCGTGGGGACCACATGCTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGACCTTCTGTGTATTTT +
Preference number: 3 (lower is better)
Translates to: GGRGDHMLIHRT*SKLVHRPSVYF
Trigger: AAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR TCA 72 bp AGTCTCACTATTTTGCCCAGGAAGGTCTGGAACTCCTaGACTCAAGCTATCCTCCAATCTTGGTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: SLTILPRKVWNS*TQAILQSWSPK
Trigger: CTTGGGAGACCAAGATTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
3UTR TCA 72 bp ACTCTCCACGCTCACCAGAGTCACAAACCCACTTTCTaGTGGGTTCACAGCCATGTTGTCATAGTCACAAGA +
Preference number: 3 (lower is better)
Translates to: TLHAHQSHKPTF*WVHSHVVIVTR
Trigger: TCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR CCA 72 bp CACCCATCCAGACTCCTTACTCCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTCATTGGTCACAAATCC +
Preference number: 3 (lower is better)
Translates to: HPSRLLTPPHLV*GELINVIGHKS
Trigger: GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAGGAGTCTGGATGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 3 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTCTTACTCCTCCCCATTaGGTCTGGGGAGAACTCATA +
Preference number: 3 (lower is better)
Translates to: QASLCYHMWALKRFWIFCLTPPH*VWGELI
Trigger: TATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAG...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 3 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR CCA 72 bp CCATGTTGTCATAGTCACAAGACATGTCATCGGGAGTaGCTTCTCCCGAACACACTCGGAATGAAATATTCT +
Preference number: 3 (lower is better)
Translates to: PCCHSHKTCHRE*LLPNTLGMKYS
Trigger: AGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGTCTTGTGACTATGACAACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAATACCATATGTGGGCTTaGAAAAGATTCTGGATTTTC +
Preference number: 3 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKYHMWA*KRFWIF
Trigger: GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTA...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
3UTR-3UTR CAA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAAGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 3 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGCGCCCCTCCGCCCCCTaGGACGTCACTGCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVRPSAP*DVTARR
Trigger: CCTCCTCGCAGTGACGTCCCAGGGGGCGGAGGGGCG...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000436913.6
CDS-3UTR CCA 90 bp ATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCCGGTTCCCGGCCTCATaGCCCGACTCGGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: MTGWDKGYSQNVGVQQEVRFPAS*PDSGAP
Trigger: GGGCGCACCCGAGTCGGGCCATGAGGCCGGGAACCG...GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGTGGCGGGCAGAGGCGTaGGCGACAACTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVWRAEA*ATTATA
Trigger: CGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCA...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCGGCGTGCGCGACAACTaGAACCGCGGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVGVRDN*NRGSSI
Trigger: GATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCC...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGCGGTTCCCGGCCTCATaGCCCGACTCGGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLRFPAS*PDSGAP
Trigger: GGGCGCACCCGAGTCGGGCCATGAGGCCGGGAACCG...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGCGGTTCCCGGCCTCATaGCCCGACTCGGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALRFPAS*PDSGAP
Trigger: GGGCGCACCCGAGTCGGGCCATGAGGCCGGGAACCG...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCGGGCTGTTTCCCTGGTaGGGAGAGGGCCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVGLFPW*GEGQMV
Trigger: CACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGGGGCTGTTTCCCTGGTaGGGAGAGGGCCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVGLFPW*GEGQMV
Trigger: CACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTGGCGGGCAGAGGCGTaGGCGACAACTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWAWRAEA*ATTATA
Trigger: CGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCA...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR GCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATGGCGGGCAGAGGCGTaGGCGACAACTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGWRAEA*ATTATA
Trigger: CGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCA...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGCCACGCAGACCTCGCTaGCGCAGGATGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVPRRPR*RRMAHP
Trigger: TGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGG...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGGCGGGCAGAGGCGTaGGCGACAACTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLWRAEA*ATTATA
Trigger: CGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCA...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCTGGCGGGCAGAGGCGTaGGCGACAACTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSWRAEA*ATTATA
Trigger: CGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCA...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAACGGTTCCCGGCCTCATaGCCCGACTCGGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKRFPAS*PDSGAP
Trigger: GGGCGCACCCGAGTCGGGCCATGAGGCCGGGAACCG...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCGGTTCCCGGCCTCATaGCCCGACTCGGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: PPHLVWGELINVIGHKSTRFPAS*PDSGAP
Trigger: GGGCGCACCCGAGTCGGGCCATGAGGCCGGGAACCG...AGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGACTCCTCCAGCGAGGTTaGCGCCAGACACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGLLQRG*RQTLGQ
Trigger: CTGGCCGAGTGTCTGGCGCCAACCTCGCTGGAGGAG...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436913.6
CDS-3UTR TCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGATGGCTGATGGTACATaGCCACGCAGACCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVMADGT*PRRPRC
Trigger: GCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCAT...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGAGGGCTGTTTCCCTGGTaGGGAGAGGGCCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGGLFPW*GEGQMV
Trigger: CACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp TCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTGGGCTGTTTCCCTGGTaGGGAGAGGGCCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: SPEHTRNEIFFRSGRVSAGLFPW*GEGQMV
Trigger: CACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC...AGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp TCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTCTGGCTGCCCTCCTCTaGGGTCCAAATCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SPEHTRNEIFFRSGRVSALAALL*GPNPRH
Trigger: GTGCCTCGGATTTGGACCTCAGAGGAGGGCAGCCAG...AGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525126.5
CDS-3UTR GCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACGGCGTGCGCGACAACTaGAACCGCGGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYGVRDN*NRGSSI
Trigger: GATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCC...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACTGTAGGGGCCTCCGATaGCAGCGGGTGCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYCRGLR*QRVPMA
Trigger: AGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACA...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCGTGATCCTAGCTCACTaGAGCCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVVILAH*SLNLLG
Trigger: GCCCAGGAGGTTGAGGCTGCAGTGAGCTAGGATCAC...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAACCCTCCCCGGCAGACTaGCTGCCCACTCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKPSPAD*LPTQQA
Trigger: CGCCTGCTGAGTGGGCAGCCAGTCTGCCGGGGAGGG...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGCCCTCCCCGGCAGACTaGCTGCCCACTCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLPSPAD*LPTQQA
Trigger: CGCCTGCTGAGTGGGCAGCCAGTCTGCCGGGGAGGG...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCCCCTCCCCGGCAGACTaGCTGCCCACTCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TPPHLVWGELINVIGHKSPSPAD*LPTQQA
Trigger: CGCCTGCTGAGTGGGCAGCCAGTCTGCCGGGGAGGG...GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGCCCTCCCCGGCAGACTaGCTGCCCACTCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRPSPAD*LPTQQA
Trigger: CGCCTGCTGAGTGGGCAGCCAGTCTGCCGGGGAGGG...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGGCCAGCGGGTGCCGATaGCTGATGGTACATGACCAC +
Preference number: 4 (lower is better)
Translates to: ADAQASLCYHMWALKRFWASGCR*LMVHDH
Trigger: GTGGTCATGTACCATCAGCCATCGGCACCCGCTGGC...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
3UTR CAA 72 bp GCTGTTTCCCTGGTGAGGAGAGGGCCAGATGGTGTGTaGCTTCTTTGTGCTAGGGTCTGGCTGCTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: AVSLVRRGPDGV*LLCARVWLLPF
Trigger: AAACGGGAGCAGCCAGACCCTAGCACAAAGAAGCAACACACCATCTGGCCCTCTCCTCACCAGGGAAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525866.5
CDS-3UTR TCA 90 bp GTGGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCCTTCAGACTCGATGCTaGCTAGCTGGCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: VASPEHTRNEIFFRSGRVLQTRC*LAGLHP
Trigger: GGGATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAG...GACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGGCGGGTGCCGATGGCTaGTGGTACATGACCACGCAG +
Preference number: 4 (lower is better)
Translates to: TRNEIFFRSGRVSAKSASAGADG*WYMTTQ
Trigger: CTGCGTGGTCATGTACCATCAGCCATCGGCACCCGC...CGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGGGGCTGTTTCCCTGGTaGGGAGAGGGCCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALGLFPW*GEGQMV
Trigger: CACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGGCGTGCGCGACAACTaGAACCGCGGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQGVRDN*NRGSSI
Trigger: GATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCC...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCGGCGTGCGCGACAACTaGAACCGCGGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: AQASLCYHMWALKRFWIFGVRDN*NRGSSI
Trigger: GATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCC...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTGGCGGGCAGAGGCGTaGGCGACAACTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLWRAEA*ATTATA
Trigger: CGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCA...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTCCCTCCCCGGCAGACTaGCTGCCCTCCTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCPSPAD*LPSSEV
Trigger: GACCTCAGAGGAGGGCAGCCAGTCTGCCGGGGAGGG...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375615.7
ENST00000525126.5
CDS-3UTR CCA 90 bp ACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCCCCTCCCCGGCAGACTaGCTGCCCTCCTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TPPHLVWGELINVIGHKSPSPAD*LPSSEV
Trigger: GACCTCAGAGGAGGGCAGCCAGTCTGCCGGGGAGGG...GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525126.5
CDS-3UTR TCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGAATGGCTGATGGTACATaGCCACGCAGACCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGMADGT*PRRPRC
Trigger: GCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCAT...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGCGGGTGCCGATGGCTaGTGGTACATGACCACGCAG +
Preference number: 4 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKAGADG*WYMTTQ
Trigger: CTGCGTGGTCATGTACCATCAGCCATCGGCACCCGC...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCGGCAGGCTGTGCTATTaGTTTGTTTCTCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVGRLCY*FVSPHA
Trigger: GGCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCC...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCTGTAGGGGCCTCCGATaGCAGCGGGTGCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: TPPHLVWGELINVIGHKSCRGLR*QRVPMA
Trigger: AGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACA...GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGCTTTGTTTGTAGGGGCCTCCGATaGCAGCGGGTGCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: MKYSSGLAGSQLSQLRFVCRGLR*QRVPMA
Trigger: AGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACA...AACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CTCTCCACGCTCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: LSTLTRVTNPLSDGFTAMVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...CATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CTCTCCACGCTCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGAGGGTCTCATTCTGTTaGCCACGCAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSTLTRVTNPLSDGFTAMRVSFC*PRRRAV
Trigger: CACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCT...CATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525866.5
CDS-3UTR CCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACGCCAGCGGGTGCCGATaGCTGATGGTACATGACCAC +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYASGCR*LMVHDH
Trigger: GTGGTCATGTACCATCAGCCATCGGCACCCGCTGGC...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCACATGTCATCGGGAGTaGCTTCTCCCGAACACACTC +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVTCHRE*LLPNTL
Trigger: GAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGT...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCTCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: MTGWDKGYSQNVGVQQEVSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATCTTCAGACTCGATGCTaGCTAGCTGGCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDLQTRC*LAGLHP
Trigger: GGGATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAG...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGGCGGGTGCCGATGGCTaGTGGTACATGACCACGCAG +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLAGADG*WYMTTQ
Trigger: CTGCGTGGTCATGTACCATCAGCCATCGGCACCCGC...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGGCAGGCTGTGCTATTaGTTTGTTTCTCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEGRLCY*FVSPHA
Trigger: GGCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCC...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCCACGCAGACCTCGCTaGCGCAGGATGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: SPESQTHFLMGSQPCCHSPRRPR*RRMAHP
Trigger: TGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGG...ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWAVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR GCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGTATGAGAATTGCCGATaGACAGGCCAGCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVYENCR*TGQPVL
Trigger: TAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATA...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGACTCGCTGCCGCAGGATaGCTCATCCACATACCAGTT +
Preference number: 4 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGLAAAG*LIHIPV
Trigger: AACTGGTATGTGGATGAGCCATCCTGCGGCAGCGAG...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGGAGAAGGGGAATGCTaGGGATTAGGATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: MTGWDKGYSQNVGVQQEVGEGEC*GLGCRP
Trigger: TGGCCTACATCCTAATCCCCAGCATTCCCCTTCTCC...GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCACATGTCATCGGGAGTaGCTTCTCCCGAACACACTC +
Preference number: 4 (lower is better)
Translates to: MTGWDKGYSQNVGVQQEVTCHRE*LLPNTL
Trigger: GAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGT...GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CACTCTCCACGCTCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCAACATGTCATCGGGAGTaGCTTCTCCCGAACACACTC +
Preference number: 4 (lower is better)
Translates to: HSPRSPESQTHFLMGSQPTCHRE*LLPNTL
Trigger: GAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGT...TGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTTCAGACTCGATGCTaGCTAGCTGGCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKLQTRC*LAGLHP
Trigger: GGGATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAG...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGAGTCTCACTATTTTGCCCAGGAAGGTCTGGAACTCCTGAACTCAAGCTATCCCTTCAGACTCGATGCTaGCTAGCTGGCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RVSLFCPGRSGTPELKLSLQTRC*LAGLHP
Trigger: GGGATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAG...GGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR TCA 90 bp ATCTTCTTCCTGTGTTTCTTCTGGAAGTACAGGTGTTGTCAGCTCTGTTTCCTCGGGCTGTTTCCCTGGTaGGGAGAGGGCCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: IFFLCFFWKYRCCQLCFLGLFPW*GEGQMV
Trigger: CACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC...GAGGAAACAGAGCTGACAACACCTGTACTTCCAGAAGAAACACAGGAAGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525866.5
CDS-3UTR TCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGCACAAACCCACTTTCTaGTGGGTTCACAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVHKPTF*WVHSHV
Trigger: AACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTG...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCAAGGTCTGGAACTCCTaGACTCAAGCTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVKVWNS*TQAILQ
Trigger: TTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTT...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTGGCGTGCGCGACAACTaGAACCGCGGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPGVRDN*NRGSSI
Trigger: GATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCC...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTGGCAGGCTGTGCTATTaGTTTGTTTCTCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWAGRLCY*FVSPHA
Trigger: GGCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCC...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR GCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGGGTCCTGGCAGGCTGTaGTATTGCTTTGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ADAQASLCYHMWALKRFWGPGRL*YCFVSP
Trigger: AGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACC...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCTGTAGGGGCCTCCGATaGCAGCGGGTGCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFCRGLR*QRVPMA
Trigger: AGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACA...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGAGGAGGAGAAGGGGAATaGTGGGGATTAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGGGEGE*WGLGCR
Trigger: CCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCC...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGGTGCTAGGGTCTGGCTaGTCCCGTTTTCTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVVLGSG*SRFLFL
Trigger: TAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCAC...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGGCCAGATGGTGTGTTaGTTCTTTGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEGQMVC*FFVLGS
Trigger: AGACCCTAGCACAAAGAAGCAACACACCATCTGGCC...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGCCCATCTTTATCACTaGCAGGTAAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEAHLYH*QVKLCP
Trigger: GGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGC...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGAGTCTCACTATTTTGCCCAGGAAGGTCTGGAACTCCTGAACTCAAGCTATCCGTGATCCTAGCTCACTaGAGCCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVSLFCPGRSGTPELKLSVILAH*SLNLLG
Trigger: GCCCAGGAGGTTGAGGCTGCAGTGAGCTAGGATCAC...GGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGAGGGTCTCATTCTGTTaGCCACGCAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALRVSFC*PRRRAV
Trigger: CACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCT...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCTCCTGCAGGCTTCTTTaGCTTCCTCAAAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVSCRLL*LPQSSV
Trigger: GACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGA...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGGCCAGCGGGTGCCGATaGCTGATGGTACATGACCAC +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRASGCR*LMVHDH
Trigger: GTGGTCATGTACCATCAGCCATCGGCACCCGCTGGC...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTGCCAGCGGGTGCCGATaGCTGATGGTACATGACCAC +
Preference number: 4 (lower is better)
Translates to: SPESQTHFLMGSQPCCHSASGCR*LMVHDH
Trigger: GTGGTCATGTACCATCAGCCATCGGCACCCGCTGGC...ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCTTTGTGCTAGGGTCTaGCTGCTCCCGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVLCARV*LLPFSF
Trigger: AAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAG...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CCA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGAACATGTCATCGGGAGTaGCTTCTCCCGAACACACTC +
Preference number: 4 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGTCHRE*LLPNTL
Trigger: GAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGT...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGCCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTC +
Preference number: 4 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVPPHLV*GELINV
Trigger: GACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACTCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCGATACAGCCAAAACGTaGGGGTCCAACAGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSDTAKT*GSNRRS
Trigger: CGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATC...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVLIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGCTTTGTTCTTCAGACTCGATGCTaGCTAGCTGGCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: MKYSSGLAGSQLSQLRFVLQTRC*LAGLHP
Trigger: GGGATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAG...AACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTATGGCTGATGGTACATaGCCACGCAGACCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCMADGT*PRRPRC
Trigger: GCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCAT...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp GGAGTGGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGCACAAACCCACTTTCTaGTGGGTTCACAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: GVASPEHTRNEIFFRSGRHKPTF*WVHSHV
Trigger: AACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTG...CCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGGGCAGGCTGTGCTATTaGTTTGTTTCTCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLGRLCY*FVSPHA
Trigger: GGCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCC...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTGGTCCTGGCAGGCTGTaGTATTGCTTTGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWAGPGRL*YCFVSP
Trigger: AGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACC...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR GCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCCACGCAGACCTCGCTaGCGCAGGATGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFPRRPR*RRMAHP
Trigger: TGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTCCGATGCCAGCGGGTaGCGATGGCTGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLSDASG*RWLMVH
Trigger: ATGTACCATCAGCCATCGGCACCCGCTGGCATCGGA...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTTCCGATGCCAGCGGGTaGCGATGGCTGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCSDASG*RWLMVH
Trigger: ATGTACCATCAGCCATCGGCACCCGCTGGCATCGGA...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGTCCGATGCCAGCGGGTaGCGATGGCTGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRSDASG*RWLMVH
Trigger: ATGTACCATCAGCCATCGGCACCCGCTGGCATCGGA...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCGGAGGAGAAGGGGAATaGTGGGGATTAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSGGEGE*WGLGCR
Trigger: CCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCC...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTGCTAGGGTCTGGCTaGTCCCGTTTTCTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEVLGSG*SRFLFL
Trigger: TAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCAC...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: AQASLCYHMWALKRFWIFVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTGCCCATCTTTATCACTaGCAGGTAAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWAAHLYH*QVKLCP
Trigger: GGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGC...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR GCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCAGGGTCTCATTCTGTTaGCCACGCAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AQASLCYHMWALKRFWIFRVSFC*PRRRAV
Trigger: CACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCT...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCGCTGCCGCAGGATaGCTCATCCACATACCAGTT +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKLAAAG*LIHIPV
Trigger: AACTGGTATGTGGATGAGCCATCCTGCGGCAGCGAG...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCACTCGCTGCCGCAGGATaGCTCATCCACATACCAGTT +
Preference number: 4 (lower is better)
Translates to: EHTRNEIFFRSGRVSAKSLAAAG*LIHIPV
Trigger: AACTGGTATGTGGATGAGCCATCCTGCGGCAGCGAG...TGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATGGAGAAGGGGAATGCTaGGGATTAGGATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDGEGEC*GLGCRP
Trigger: TGGCCTACATCCTAATCCCCAGCATTCCCCTTCTCC...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGGAGGAGAGGGCCAGATaGTGTGTTGCTTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALEERAR*CVASLC
Trigger: GCACAAAGAAGCAACACACCATCTGGCCCTCTCCTC...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGCCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTC +
Preference number: 4 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQEPPHLV*GELINV
Trigger: GACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAATCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCATCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: EHTRNEIFFRSGRVSAKSSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...TGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGATACAGCCAAAACGTaGGGGTCCAACAGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQDTAKT*GSNRRS
Trigger: CGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATC...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 4 (lower is better)
Translates to: ADAQASLCYHMWALKRFWLIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ADAQASLCYHMWALKRFWQGKQR*FSKLHS
Trigger: GCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTG...CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTAACATACAACTGTGGTaGCCACAAGGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWANIQLW*PQGGGE
Trigger: TTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTT...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR TCA 90 bp GTGGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCCGAACACACTCGGAATaGAATATTCTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VASPEHTRNEIFFRSGRVRTHSE*NILQVW
Trigger: CCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCG...GACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCGGTCCTGGCAGGCTGTaGTATTGCTTTGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSGPGRL*YCFVSP
Trigger: AGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACC...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGGAGGAGAAGGGGAATaGTGGGGATTAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQGGEGE*WGLGCR
Trigger: CCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCC...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTGTGCTAGGGTCTGGCTaGTCCCGTTTTCTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWAVLGSG*SRFLFL
Trigger: TAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCAC...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGGGCCAGATGGTGTGTTaGTTCTTTGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLGQMVC*FFVLGS
Trigger: AGACCCTAGCACAAAGAAGCAACACACCATCTGGCC...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGGGCCAGATGGTGTGTTaGTTCTTTGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALGQMVC*FFVLGS
Trigger: AGACCCTAGCACAAAGAAGCAACACACCATCTGGCC...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCGGCCAGATGGTGTGTTaGTTCTTTGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSGQMVC*FFVLGS
Trigger: AGACCCTAGCACAAAGAAGCAACACACCATCTGGCC...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACTCCTTACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCAGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: TPYSSPFGLGRTHKCHWSVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...TGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCGTCGTGGGGACCACATaGTCATCCACAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPRVVGTT*SSTGPD
Trigger: ATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGAC...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATGCCCATCTTTATCACTaGCAGGTAAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDAHLYH*QVKLCP
Trigger: GGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGC...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTATGAGAATTGCCGATaGACAGGCCAGCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLYENCR*TGQPVL
Trigger: TAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATA...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCTATGAGAATTGCCGATaGACAGGCCAGCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSYENCR*TGQPVL
Trigger: TAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATA...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWANRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR CCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGGGAGAAGGGGAATGCTaGGGATTAGGATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKGEGEC*GLGCRP
Trigger: TGGCCTACATCCTAATCCCCAGCATTCCCCTTCTCC...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTCTTTGTGCTAGGGTCTaGCTGCTCCCGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TDMRIADAQASLCYHMWALCARV*LLPFSF
Trigger: AAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAG...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGAGGAGAGGGCCAGATaGTGTGTTGCTTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQEERAR*CVASLC
Trigger: GCACAAAGAAGCAACACACCATCTGGCCCTCTCCTC...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGAGGAGAGGGCCAGATaGTGTGTTGCTTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKEERAR*CVASLC
Trigger: GCACAAAGAAGCAACACACCATCTGGCCCTCTCCTC...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAACATGTCATCGGGAGTaGCTTCTCCCGAACACACTC +
Preference number: 4 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKTCHRE*LLPNTL
Trigger: GAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGT...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCTGTGCTACCATATGTaGGCTTTGAAAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVLCYHM*ALKRFW
Trigger: CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAG...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATGCTATCCTCCAATCTTaGTCTCCCAAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDAILQS*SPKVLG
Trigger: TCCCAGAACCTTGGGAGACCAAGATTGGAGGATAGC...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR TCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCAACATACAACTGTGGTaGCCACAAGGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSNIQLW*PQGGGE
Trigger: TTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTT...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGCACAAACCCACTTTCTaGTGGGTTCACAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLHKPTF*WVHSHV
Trigger: AACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTG...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp GGAGTGGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGCCAAGTGACATTTATTaGGACTCTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GVASPEHTRNEIFFRSGRPSDIY*DSTMCQ
Trigger: CTGGCACATAGTAGAGTCTCAATAAATGTCACTTGG...CCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTGGGGCTCCATATGTaGAGCAAAGTTGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDLGLHM*SKVAEL
Trigger: TAGCTCAGCAACTTTGCTTCACATATGGAGCCCCAA...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR GCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGGGCAGGCTGTGCTATTaGTTTGTTTCTCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRGRLCY*FVSPHA
Trigger: GGCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCC...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGGTCCTGGCAGGCTGTaGTATTGCTTTGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQGPGRL*YCFVSP
Trigger: AGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACC...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTGGAGGAGAAGGGGAATaGTGGGGATTAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCGGEGE*WGLGCR
Trigger: CCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCC...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGTATGAGAATTGCCGATaGACAGGCCAGCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKYENCR*TGQPVL
Trigger: TAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATA...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACTCCTGCAGGCTTCTTTaGCTTCCTCAAAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYSCRLL*LPQSSV
Trigger: GACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGA...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCTCCTGCAGGCTTCTTTaGCTTCCTCAAAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSSCRLL*LPQSSV
Trigger: GACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGA...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GGAGTGGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGTTCCTGTGTTTCTTCTaGAAGTACAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GVASPEHTRNEIFFRSGRFLCFF*KYRCCQ
Trigger: CTGACAACACCTGTACTTCCAGAAGAAACACAGGAA...CCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CTCTCCACGCTCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTCCTGTGTTTCTTCTaGAAGTACAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSTLTRVTNPLSDGFTAMFLCFF*KYRCCQ
Trigger: CTGACAACACCTGTACTTCCAGAAGAAACACAGGAA...CATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTGGAGAAGGGGAATGCTaGGGATTAGGATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCGEGEC*GLGCRP
Trigger: TGGCCTACATCCTAATCCCCAGCATTCCCCTTCTCC...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCGAGGAGAGGGCCAGATaGTGTGTTGCTTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: TPPHLVWGELINVIGHKSEERAR*CVASLC
Trigger: GCACAAAGAAGCAACACACCATCTGGCCCTCTCCTC...GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGACATGTCATCGGGAGTaGCTTCTCCCGAACACACTC +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLTCHRE*LLPNTL
Trigger: GAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGT...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGCCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTC +
Preference number: 4 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALPPHLV*GELINV
Trigger: GACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLQGKQR*FSKLHS
Trigger: GCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTG...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSQGKQR*FSKLHS
Trigger: GCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTG...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TRNEIFFRSGRVSAKSASQGKQR*FSKLHS
Trigger: GCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTG...CGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CTCTCCACGCTCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGCTGTGCTACCATATGTaGGCTTTGAAAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LSTLTRVTNPLSDGFTAMLCYHM*ALKRFW
Trigger: CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAG...CATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAGCGGGTGCCGATGGCTaGTGGTACATGACCACGCAG +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGAGADG*WYMTTQ
Trigger: CTGCGTGGTCATGTACCATCAGCCATCGGCACCCGC...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGAACATACAACTGTGGTaGCCACAAGGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKNIQLW*PQGGGE
Trigger: TTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTT...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGAAGGTCTGGAACTCCTaGACTCAAGCTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKKVWNS*TQAILQ
Trigger: TTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTT...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGGTCCTGGCAGGCTGTaGTATTGCTTTGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKGPGRL*YCFVSP
Trigger: AGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACC...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGACCACGCAGACCTCGCTaGCGCAGGATGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGPRRPR*RRMAHP
Trigger: TGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGG...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGGCCAGATGGTGTGTTaGTTCTTTGTGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKGQMVC*FFVLGS
Trigger: AGACCCTAGCACAAAGAAGCAACACACCATCTGGCC...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGGCCCATCTTTATCACTaGCAGGTAAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLAHLYH*QVKLCP
Trigger: GGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGC...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTGCCCATCTTTATCACTaGCAGGTAAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCAHLYH*QVKLCP
Trigger: GGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGC...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQNRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR CCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAATCCTGCAGGCTTCTTTaGCTTCCTCAAAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKSCRLL*LPQSSV
Trigger: GACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGA...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAATCCTGCAGGCTTCTTTaGCTTCCTCAAAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQSCRLL*LPQSSV
Trigger: GACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGA...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCTCGCTGCCGCAGGATaGCTCATCCACATACCAGTT +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFLAAAG*LIHIPV
Trigger: AACTGGTATGTGGATGAGCCATCCTGCGGCAGCGAG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCACTCATAAATGTCATTaGTCACAAATCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVTHKCH*SQIHSP
Trigger: TGGAGAGTGGATTTGTGACCAATGACATTTATGAGT...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCCCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTC +
Preference number: 4 (lower is better)
Translates to: AQASLCYHMWALKRFWIFPPHLV*GELINV
Trigger: GACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTATCCTCCAATCTTaGTCTCCCAAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKAILQS*SPKVLG
Trigger: TCCCAGAACCTTGGGAGACCAAGATTGGAGGATAGC...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR TCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCCAGTTCCTAAATTGTaGTATGCTGCCATCAGTCCA +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKPVPKL*YAAISP
Trigger: TGGACTGATGGCAGCATATCACAATTTAGGAACTGG...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAACCAGTTCCTAAATTGTaGTATGCTGCCATCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKPVPKL*YAAISP
Trigger: TGGACTGATGGCAGCATATCACAATTTAGGAACTGG...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTAACATACAACTGTGGTaGCCACAAGGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCNIQLW*PQGGGE
Trigger: TTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTT...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTAACATACAACTGTGGTaGCCACAAGGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPHLVWGELINVIGHKSTNIQLW*PQGGGE
Trigger: TTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTT...AGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCAACATACAACTGTGGTaGCCACAAGGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TPPHLVWGELINVIGHKSNIQLW*PQGGGE
Trigger: TTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTT...GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCGAACACACTCGGAATaGAATATTCTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKRTHSE*NILQVW
Trigger: CCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCG...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGCTTTGTTCACAAACCCACTTTCTaGTGGGTTCACAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: MKYSSGLAGSQLSQLRFVHKPTF*WVHSHV
Trigger: AACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTG...AACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAACTGGCTGCCCTCCTCTaGGGTCCAAATCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKLAALL*GPNPRH
Trigger: GTGCCTCGGATTTGGACCTCAGAGGAGGGCAGCCAG...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375615.7
ENST00000525126.5
CDS-3UTR GCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCGGAGGAGAAGGGGAATaGTGGGGATTAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFGGEGE*WGLGCR
Trigger: CCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCC...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTGGAGGAGAAGGGGAATaGTGGGGATTAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPGGEGE*WGLGCR
Trigger: CCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCC...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGTGCTAGGGTCTGGCTaGTCCCGTTTTCTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKVLGSG*SRFLFL
Trigger: TAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCAC...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLNRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR GCA 90 bp ACTCCTTACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCAAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPYSSPFGLGRTHKCHWSNRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...TGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000525866.5
CDS-3UTR GCA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTAACAGATATGAGAATTaGCGATGCACAGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSNRYEN*RCTGQP
Trigger: AGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTT...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR CCA 90 bp CCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: PPHLVWGELINVIGHKSTSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...AGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGCTTTGTTCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 4 (lower is better)
Translates to: MKYSSGLAGSQLSQLRFVLIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...AACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGCAAGGAAAACAGAGGTaGTTTTCCAAGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRQGKQR*FSKLHS
Trigger: GCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTG...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACCTGTGCTACCATATGTaGGCTTTGAAAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYLCYHM*ALKRFW
Trigger: CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAG...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGCTGTGCTACCATATGTaGGCTTTGAAAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: TRNEIFFRSGRVSAKSASLCYHM*ALKRFW
Trigger: CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAG...CGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGCCAGTTCCTAAATTGTaGTATGCTGCCATCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLPVPKL*YAAISP
Trigger: TGGACTGATGGCAGCATATCACAATTTAGGAACTGG...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACTCCTTACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACCAGTTCCTAAATTGTaGTATGCTGCCATCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TPYSSPFGLGRTHKCHWSPVPKL*YAAISP
Trigger: TGGACTGATGGCAGCATATCACAATTTAGGAACTGG...TGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCGAACACACTCGGAATaGAATATTCTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPHLVWGELINVIGHKSTRTHSE*NILQVW
Trigger: CCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCG...AGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAACTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGA +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKLIHRT*SKLVHR
Trigger: TCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAG...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGCTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGA +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRLIHRT*SKLVHR
Trigger: TCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAG...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAACCAAGTGACATTTATTaGGACTCTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKPSDIY*DSTMCQ
Trigger: CTGGCACATAGTAGAGTCTCAATAAATGTCACTTGG...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGAGTCTCACTATTTTGCCCAGGAAGGTCTGGAACTCCTGAACTCAAGCTATCCGAGGCCAAACACAATTaGAACAATGAGGTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: RVSLFCPGRSGTPELKLSEAKHN*NNEVCQ
Trigger: TTGACAGACCTCATTGTTTCAATTGTGTTTGGCCTC...GGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR GCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCGGTCCTGGCAGGCTGTaGTATTGCTTTGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFGPGRL*YCFVSP
Trigger: AGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACC...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGATCCGATGCCAGCGGGTaGCGATGGCTGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGSDASG*RWLMVH
Trigger: ATGTACCATCAGCCATCGGCACCCGCTGGCATCGGA...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTGCCCATCTTTATCACTaGCAGGTAAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPAHLYH*QVKLCP
Trigger: GGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGC...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTTATGAGAATTGCCGATaGACAGGCCAGCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPYENCR*TGQPVL
Trigger: TAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATA...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTAGAGTCTCACTATTTTaGCCAGGAAGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSRVSLF*PGRSGT
Trigger: AGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp CCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTAGAGTCTCACTATTTTaGCCAGGAAGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: PPHLVWGELINVIGHKSTRVSLF*PGRSGT
Trigger: AGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT...AGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525866.5
CDS-3UTR GCA 90 bp GCTGGTGATTTAAATAATGGCTTTCAGACCTCCAATGTGTATATGATTGATGCTGTGATCCTAGCTCACTaGAGCCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGDLNNGFQTSNVYMIDAVILAH*SLNLLG
Trigger: GCCCAGGAGGTTGAGGCTGCAGTGAGCTAGGATCAC...AGCATCAATCATATACACATTGGAGGTCTGAAAGCCATTATTTAAATCACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR CCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTTCCTGTGTTTCTTCTaGAAGTACAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: AQASLCYHMWALKRFWIFFLCFF*KYRCCQ
Trigger: CTGACAACACCTGTACTTCCAGAAGAAACACAGGAA...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAATTCCTGTGTTTCTTCTaGAAGTACAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQFLCFF*KYRCCQ
Trigger: CTGACAACACCTGTACTTCCAGAAGAAACACAGGAA...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTACTCATAAATGTCATTaGTCACAAATCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPEHTRNEIFFRSGRVSATHKCH*SQIHSP
Trigger: TGGAGAGTGGATTTGTGACCAATGACATTTATGAGT...AGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCGCTATCCTCCAATCTTaGTCTCCCAAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFAILQS*SPKVLG
Trigger: TCCCAGAACCTTGGGAGACCAAGATTGGAGGATAGC...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR TCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAAATGGCTGATGGTACATaGCCACGCAGACCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKMADGT*PRRPRC
Trigger: GCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCAT...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR TCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCACAAACCCACTTTCTaGTGGGTTCACAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFHKPTF*WVHSHV
Trigger: AACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGCCAAGTGACATTTATTaGGACTCTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRPSDIY*DSTMCQ
Trigger: CTGGCACATAGTAGAGTCTCAATAAATGTCACTTGG...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCCCAAGTGACATTTATTaGGACTCTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TPPHLVWGELINVIGHKSPSDIY*DSTMCQ
Trigger: CTGGCACATAGTAGAGTCTCAATAAATGTCACTTGG...GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCACACAATTGAAACAATaGGGTCTGTCAACAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSTQLKQ*GLSTKG
Trigger: ACCTTTTGTTGACAGACCTCATTGTTTCAATTGTGT...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR GCA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTTCTCTAGAAGGAACTaGTGGTTTCTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALFSRRN*WFLIRI
Trigger: TATTCTGATGAGAAACCAGCAGTTCCTTCTAGAGAA...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACCTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAGAAGTCACCATCAGATaGCAAGAGGTTTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQEVTIR*QEVFNE
Trigger: TTCATTGAAAACCTCTTGCCATCTGATGGTGACTTC...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTTCCTGTGTTTCTTCTaGAAGTACAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: TGQPVLPYVGFEKILDFLFLCFF*KYRCCQ
Trigger: CTGACAACACCTGTACTTCCAGAAGAAACACAGGAA...CAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTCTTTGTGCTAGGGTCTaGCTGCTCCCGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPLCARV*LLPFSF
Trigger: AAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAG...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CCA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGACTCATAAATGTCATTaGTCACAAATCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLTHKCH*SQIHSP
Trigger: TGGAGAGTGGATTTGTGACCAATGACATTTATGAGT...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCACTCATAAATGTCATTaGTCACAAATCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSTHKCH*SQIHSP
Trigger: TGGAGAGTGGATTTGTGACCAATGACATTTATGAGT...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTC +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFPPHLV*GELINV
Trigger: GACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCTCATAAGGTCGAGCTaGATGACTGGCTGGGATAAA +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFLIRSS*MTGWDK
Trigger: TTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTCTGTGCTACCATATGTaGGCTTTGAAAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCLCYHM*ALKRFW
Trigger: CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAG...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCTGTGCTACCATATGTaGGCTTTGAAAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: SPESQTHFLMGSQPCCHSLCYHM*ALKRFW
Trigger: CCAGAATCTTTTCAAAGCCCACATATGGTAGCACAG...ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTCGAACACACTCGGAATaGAATATTCTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPRTHSE*NILQVW
Trigger: CCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCG...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR TCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCGAACACACTCGGAATaGAATATTCTTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFRTHSE*NILQVW
Trigger: CCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCTCATCCACAGGACCTaGTCTAAGCTTGTTCATAGA +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFLIHRT*SKLVHR
Trigger: TCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGAGTCTCACTATTTTGCCCAGGAAGGTCTGGAACTCCTGAACTCAAGCTATCCACACAATTGAAACAATaGGGTCTGTCAACAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RVSLFCPGRSGTPELKLSTQLKQ*GLSTKG
Trigger: ACCTTTTGTTGACAGACCTCATTGTTTCAATTGTGT...GGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR GCA 90 bp AGAGTCTCACTATTTTGCCCAGGAAGGTCTGGAACTCCTGAACTCAAGCTATCCCTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RVSLFCPGRSGTPELKLSLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...GGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR GCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCCTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AQASLCYHMWALKRFWIFLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTGAAGTCACCATCAGATaGCAAGAGGTTTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: QASLCYHMWALKRFWIFCEVTIR*QEVFNE
Trigger: TTCATTGAAAACCTCTTGCCATCTGATGGTGACTTC...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGAAGTCACCATCAGATaGCAAGAGGTTTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKEVTIR*QEVFNE
Trigger: TTCATTGAAAACCTCTTGCCATCTGATGGTGACTTC...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCGAAGTCACCATCAGATaGCAAGAGGTTTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPREVTIR*QEVFNE
Trigger: TTCATTGAAAACCTCTTGCCATCTGATGGTGACTTC...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTGAAGTCACCATCAGATaGCAAGAGGTTTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSEVTIR*QEVFNE
Trigger: TTCATTGAAAACCTCTTGCCATCTGATGGTGACTTC...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp AGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCTCTAGAAGGAACTGCTaGTTTCTCATCAGAATATTT +
Preference number: 4 (lower is better)
Translates to: RYLLIRSSWMTGWDKGYSSRRNC*FLIRIF
Trigger: AAATATTCTGATGAGAAACCAGCAGTTCCTTCTAGA...GCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCTGGTGATTTAAATAATGGCTTTCAGACCTCCAATGTGTATATGATTGATGCTGGAGAAGGGGAATGCTaGGGATTAGGATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGDLNNGFQTSNVYMIDAGEGEC*GLGCRP
Trigger: TGGCCTACATCCTAATCCCCAGCATTCCCCTTCTCC...AGCATCAATCATATACACATTGGAGGTCTGAAAGCCATTATTTAAATCACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR CCA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGACTCATAAATGTCATTaGTCACAAATCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKTHKCH*SQIHSP
Trigger: TGGAGAGTGGATTTGTGACCAATGACATTTATGAGT...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAATCCAACAGGAGGTCGTaGGGACCACATGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKSNRRS*GPHAHP
Trigger: TGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGA...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCCAAGTGACATTTATTaGGACTCTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFPSDIY*DSTMCQ
Trigger: CTGGCACATAGTAGAGTCTCAATAAATGTCACTTGG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp ACAAACATGCAAACAGAACAACGTGTAGTATCAGGGATGGGAGTACATAAGCCTGAGGCCAAACACAATTaGAACAATGAGGTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TNMQTEQRVVSGMGVHKPEAKHN*NNEVCQ
Trigger: TTGACAGACCTCATTGTTTCAATTGTGTTTGGCCTC...AGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR GCA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCTTCTCTAGAAGGAACTaGTGGTTTCTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPRFSRRN*WFLIRI
Trigger: TATTCTGATGAGAAACCAGCAGTTCCTTCTAGAGAA...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SPESQTHFLMGSQPCCHSLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGCTGTATGATAATATGTaGTGCTGTATAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRLYDNM*CCIEQG
Trigger: TCCTTGCTCTATACAGCAGCACATATTATCATACAG...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGATATGAGAATTGCCGATaGACAGGCCAGCCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGYENCR*TGQPVL
Trigger: TAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATA...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTCTAGAAGGAACTGCTaGTTTCTCATCAGAATATTT +
Preference number: 4 (lower is better)
Translates to: AQASLCYHMWALKRFWIFSRRNC*FLIRIF
Trigger: AAATATTCTGATGAGAAACCAGCAGTTCCTTCTAGA...GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAATCTAGAAGGAACTGCTaGTTTCTCATCAGAATATTT +
Preference number: 4 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQSRRNC*FLIRIF
Trigger: AAATATTCTGATGAGAAACCAGCAGTTCCTTCTAGA...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCTTCCTGTGTTTCTTCTaGAAGTACAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFFLCFF*KYRCCQ
Trigger: CTGACAACACCTGTACTTCCAGAAGAAACACAGGAA...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAAGAGGAGAGGGCCAGATaGTGTGTTGCTTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKEERAR*CVASLC
Trigger: GCACAAAGAAGCAACACACCATCTGGCCCTCTCCTC...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CCA 90 bp TCACCAGAGTCACAAACCCACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTACTCATAAATGTCATTaGTCACAAATCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPESQTHFLMGSQPCCHSTHKCH*SQIHSP
Trigger: TGGAGAGTGGATTTGTGACCAATGACATTTATGAGT...ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR TCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAGGTCTGGAACTCCTaGACTCAAGCTATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGKVWNS*TQAILQ
Trigger: TTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTT...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR TCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGATTGGGGCTCCATATGTaGAGCAAAGTTGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGLGLHM*SKVAEL
Trigger: TAGCTCAGCAACTTTGCTTCACATATGGAGCCCCAA...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR CCA 90 bp ACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCTCTAGAAGGAACTGCTaGTTTCTCATCAGAATATTT +
Preference number: 4 (lower is better)
Translates to: TPPHLVWGELINVIGHKSSRRNC*FLIRIF
Trigger: AAATATTCTGATGAGAAACCAGCAGTTCCTTCTAGA...GGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CCA 90 bp GCTGGTGATTTAAATAATGGCTTTCAGACCTCCAATGTGTATATGATTGATGCTCCTCCCCATTTGGTCTaGGGAGAACTCATAAATGTC +
Preference number: 4 (lower is better)
Translates to: AGDLNNGFQTSNVYMIDAPPHLV*GELINV
Trigger: GACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG...AGCATCAATCATATACACATTGGAGGTCTGAAAGCCATTATTTAAATCACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR CCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAGCTGGATGACTGGCTaGGATAAAGGATACAGCCAA +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGSWMTG*DKGYSQ
Trigger: TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCT...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAAAGAGTCTCACTATTTTaGCCAGGAAGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKRVSLF*PGRSGT
Trigger: AGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCT...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CCA 90 bp GCTGGTGATTTAAATAATGGCTTTCAGACCTCCAATGTGTATATGATTGATGCTGAAGTCACCATCAGATaGCAAGAGGTTTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: AGDLNNGFQTSNVYMIDAEVTIR*QEVFNE
Trigger: TTCATTGAAAACCTCTTGCCATCTGATGGTGACTTC...AGCATCAATCATATACACATTGGAGGTCTGAAAGCCATTATTTAAATCACCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375614.7
ENST00000436913.6
CDS-3UTR GCA 90 bp AGATTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGATTCTCTAGAAGGAACTaGTGGTTTCTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: RFWIFCLYDNMCCCIEQGFSRRN*WFLIRI
Trigger: TATTCTGATGAGAAACCAGCAGTTCCTTCTAGAGAA...TCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR GCA 90 bp TTCTGGATTTTCTGTCTGTATGATAATATGTGCTGCTGTATAGAGCAAGGAAAATTCTCTAGAAGGAACTaGTGGTTTCTCATCAGAATA +
Preference number: 4 (lower is better)
Translates to: FWIFCLYDNMCCCIEQGKFSRRN*WFLIRI
Trigger: TATTCTGATGAGAAACCAGCAGTTCCTTCTAGAGAA...TTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS GCA 90 bp CTACGGCGGTGGAGCGGGCTGGCGGGCAGAGGCGTGCGCGACAACTaGAACCGCGGCAGCAGCATCTCTAGGCCACCGACGGACCGCACG +
Preference number: 5 (lower is better)
Translates to: LRRWSGLAGRGVRDN*NRGSSISRPPTDRT
Trigger: CGTGCGGTCCGTCGGTGGCCTAGAGATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCAGCCCGCTCCACCGCCGTAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
CDS GCA 90 bp ACACTCGGGCGCTACGGCGGTGGAGCGGGCTGGCGGGCAGAGGCGTaGGCGACAACTGCAACCGCGGCAGCAGCATCTCTAGGCCACCGA +
Preference number: 5 (lower is better)
Translates to: TLGRYGGGAGWRAEA*ATTATAAAASLGHR
Trigger: TCGGTGGCCTAGAGATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCAGCCCGCTCCACCGCCGTAGCGCCCGAGTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS TCA 90 bp TGTAGGGGCCTCCGATGCCAGCGGGTGCCGATGGCTGATGGTACATaGCCACGCAGACCTCGCTGCCGCAGGATGGCTCATCCACATACC +
Preference number: 5 (lower is better)
Translates to: CRGLRCQRVPMADGT*PRRPRCRRMAHPHT
Trigger: GGTATGTGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000528102.2
ENST00000530962.5
ENST00000533265.5
ENST00000533999.5
CDS CCA 90 bp ATTCCACTGGAACATGTAGGGGCCTCCGATGCCAGCGGGTGCCGATaGCTGATGGTACATGACCACGCAGACCTCGCTGCCGCAGGATGG +
Preference number: 5 (lower is better)
Translates to: IPLEHVGASDASGCR*LMVHDHADLAAAGW
Trigger: CCATCCTGCGGCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACATGTTCCAGTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000528102.2
ENST00000530962.5
ENST00000533265.5
ENST00000533999.5
CDS GCA 90 bp TCCCCGGCAGACTGGCTGCCCTCCTCTGAGGTCCAAATCCGAGGCTaGAGTGACACAACAGGAGGAAGGAAGCAGAGAGTCATTCCCCGG +
Preference number: 5 (lower is better)
Translates to: SPADWLPSSEVQIRG*SDTTGGRKQRVIPR
Trigger: CCGGGGAATGACTCTCTGCTTCCTTCCTCCTGTTGTGTCACTGCAGCCTCGGATTTGGACCTCAGAGGAGGGCAGCCAGTCTGCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528924.4
ENST00000530962.5
CDS CCA 90 bp AGAGAGTCATTCCCCGGAGTCAGGTGGGGCTCGTCCCACACTAACTaGAGTTCTTTCCCGATCTCTAAGCGCTCTCATACCGGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RESFPGVRWGSSHTN*SSFPISKRSHTGRS
Trigger: CGAGCGCCCGGTATGAGAGCGCTTAGAGATCGGGAAAGAACTCCAGTTAGTGTGGGACGAGCCCCACCTGACTCCGGGGAATGACTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528924.4
ENST00000530962.5
CDS-3UTR CAA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTCCTCCTCCAGCGAGGTaGGCGCCAGACACTCGGCCA +
Preference number: 5 (lower is better)
Translates to: QASLCYHMWALKRFWIFCPPPAR*APDTRP
Trigger: TGGCCGAGTGTCTGGCGCCAACCTCGCTGGAGGAGG...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436913.6
CDS CCA 90 bp ACACAACAGGAGGAAGGAAGCAGAGAGTCATTCCCCGGAGTCAGGTaGGGCTCGTCCCACACTAACTGGAGTTCTTTCCCGATCTCTAAG +
Preference number: 5 (lower is better)
Translates to: TQQEEGSRESFPGVR*GSSHTNWSSFPISK
Trigger: CTTAGAGATCGGGAAAGAACTCCAGTTAGTGTGGGACGAGCCCCACCTGACTCCGGGGAATGACTCTCTGCTTCCTTCCTCCTGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528924.4
ENST00000530962.5
CDS-3UTR CAA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTCAGGGTCTCATTCTGTaGCCCACGCAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: TDMRIADAQASLCYHMWAQGLIL*PTQESS
Trigger: ACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCTG...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CAA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGCTCCTGCAGGCTTCTTaGGCTTCCTCAAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVLLQAS*ASSKFS
Trigger: ACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAG...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCTGGAAGTACAGGTGTaGTCAGCTCTGTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: RSSWMTGWDKGYSQNVGVLEVQV*SALFPH
Trigger: GTGAGGAAACAGAGCTGACAACACCTGTACTTCCAG...GACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGAGGGCCAGATGGTGTGTaGCTTCTTTGTGCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGGPDGV*LLCARV
Trigger: GACCCTAGCACAAAGAAGCAACACACCATCTGGCCC...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TGGATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGCTCCTGCAGGCTTCTTaGGCTTCCTCAAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: WMTGWDKGYSQNVGVQQELLQAS*ASSKFS
Trigger: ACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAG...CTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTGGCAGGCTGTGCTATaGCTTTGTTTCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: TDMRIADAQASLCYHMWAWQAVL*LCFSSR
Trigger: GCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCCA...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR CAA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATGGGCCAGATGGTGTGTaGCTTCTTTGTGCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDGPDGV*LLCARV
Trigger: GACCCTAGCACAAAGAAGCAACACACCATCTGGCCC...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp GGAGTGGCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGCTTACTCCTCCCCATTaGGTCTGGGGAGAACTCATA +
Preference number: 5 (lower is better)
Translates to: GVASPEHTRNEIFFRSGRLTPPH*VWGELI
Trigger: TATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAG...CCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCAGGGTCTCATTCTGTaGCCCACGCAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKQGLIL*PTQESS
Trigger: ACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCTG...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CAA 90 bp GCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCACTCCTGCAGGCTTCTTaGGCTTCCTCAAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: ASPEHTRNEIFFRSGRVSLLQAS*ASSKFS
Trigger: ACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAG...TGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp CGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTGGCAGGCTGTGCTATaGCTTTGTTTCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: RCTGQPVLPYVGFEKILDWQAVL*LCFSSR
Trigger: GCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCCA...ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TGGGCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGACTGGAAGTACAGGTGTaGTCAGCTCTGTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: WARYLLIRSSWMTGWDKGLEVQV*SALFPH
Trigger: GTGAGGAAACAGAGCTGACAACACCTGTACTTCCAG...TCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAACAGGGTCTCATTCTGTaGCCCACGCAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKQGLIL*PTQESS
Trigger: ACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCTG...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000436913.6
ENST00000525866.5
CDS-3UTR CAA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAATGGCAGGCTGTGCTATaGCTTTGTTTCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKWQAVL*LCFSSR
Trigger: GCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCCA...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp ATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCAGCTTCGCTTTGTTGGGCCAGATGGTGTGTaGCTTCTTTGTGCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: MKYSSGLAGSQLSQLRFVGPDGV*LLCARV
Trigger: GACCCTAGCACAAAGAAGCAACACACCATCTGGCCC...AACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp CCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTGGGCCAGATGGTGTGTaGCTTCTTTGTGCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: PPHLVWGELINVIGHKSTGPDGV*LLCARV
Trigger: GACCCTAGCACAAAGAAGCAACACACCATCTGGCCC...AGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCGGGCCAGATGGTGTGTaGCTTCTTTGTGCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPRGPDGV*LLCARV
Trigger: GACCCTAGCACAAAGAAGCAACACACCATCTGGCCC...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGCTTACTCCTCCCCATTaGGTCTGGGGAGAACTCATA +
Preference number: 5 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALLTPPH*VWGELI
Trigger: TATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAG...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACCTTACTCCTCCCCATTaGGTCTGGGGAGAACTCATA +
Preference number: 5 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYLTPPH*VWGELI
Trigger: TATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAG...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp ATGACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: MTGWDKGYSQNVGVQQEVGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...GACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACAGCCAACTCCTGCAGGCTTCTTaGGCTTCCTCAAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: YLLIRSSWMTGWDKGYSQLLQAS*ASSKFS
Trigger: ACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAG...TTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp CCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTTGGCAGGCTGTGCTATaGCTTTGTTTCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: PPHLVWGELINVIGHKSTWQAVL*LCFSSR
Trigger: GCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCCA...AGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp GAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCAGCTAAGTCACTGGAAGTACAGGTGTaGTCAGCTCTGTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: EHTRNEIFFRSGRVSAKSLEVQV*SALFPH
Trigger: GTGAGGAAACAGAGCTGACAACACCTGTACTTCCAG...TGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAACTTACTCCTCCCCATTaGGTCTGGGGAGAACTCATA +
Preference number: 5 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKLTPPH*VWGELI
Trigger: TATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAG...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCCTCCTGCAGGCTTCTTaGGCTTCCTCAAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPRLLQAS*ASSKFS
Trigger: ACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAG...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AAACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAACTGGAAGTACAGGTGTaGTCAGCTCTGTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: KQRWFSKLHSPSLSLPGKLEVQV*SALFPH
Trigger: GTGAGGAAACAGAGCTGACAACACCTGTACTTCCAG...TTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp ACTCCTTACTCCTCCCCATTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACTTACTCCTCCCCATTaGGTCTGGGGAGAACTCATA +
Preference number: 5 (lower is better)
Translates to: TPYSSPFGLGRTHKCHWSLTPPH*VWGELI
Trigger: TATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAG...TGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp CACTTTCTGATGGGTTCACAGCCATGTTGTCATAGTCACAAGACATGTCATCGGCTTACTCCTCCCCATTaGGTCTGGGGAGAACTCATA +
Preference number: 5 (lower is better)
Translates to: HFLMGSQPCCHSHKTCHRLTPPH*VWGELI
Trigger: TATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAG...CCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: RWFSKLHSPSLSLPGKALGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...CAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp ACTGGCTGGGATAAAGGATACAGCCAAAACGTGGGGGTCCAACAGGAGGTCGTGTACCATATGTGGGCTTaGAAAAGATTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: TGWDKGYSQNVGVQQEVVYHMWA*KRFWIF
Trigger: GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTA...CACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCTGGCAGGCTGTGCTATaGCTTTGTTTCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFWQAVL*LCFSSR
Trigger: GCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCCA...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTGGCTGCTCCCGTTTTTaGCCTTTTTCTACAGATCCA +
Preference number: 5 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSGCSRF*PFSTDP
Trigger: TGGATCTGTAGAAAAAGGCAAAAAACGGGAGCAGCC...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TTTGGTCTGGGGAGAACTCATAAATGTCATTGGTCACAAATCCACTCTCCACGCGGCTGCTCCCGTTTTTaGCCTTTTTCTACAGATCCA +
Preference number: 5 (lower is better)
Translates to: FGLGRTHKCHWSQIHSPRGCSRF*PFSTDP
Trigger: TGGATCTGTAGAAAAAGGCAAAAAACGGGAGCAGCC...GCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CAA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTATTTGCAAATGAAATaGTTCTTCATGTTGCACCGG +
Preference number: 5 (lower is better)
Translates to: TDMRIADAQASLCYHMWAYLQMK*FFMLHR
Trigger: CCGGTGCAACATGAAGAACAATTTCATTTGCAAATA...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
CDS-3UTR CAA 90 bp GCTTCTCCCGAACACACTCGGAATGAAATATTCTTCAGGTCTGGCCGGGTCTCATATTTGCAAATGAAATaGTTCTTCATGTTGCACCGG +
Preference number: 5 (lower is better)
Translates to: ASPEHTRNEIFFRSGRVSYLQMK*FFMLHR
Trigger: CCGGTGCAACATGAAGAACAATTTCATTTGCAAATA...TGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCCTGGAAGTACAGGTGTaGTCAGCTCTGTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFLEVQV*SALFPH
Trigger: GTGAGGAAACAGAGCTGACAACACCTGTACTTCCAG...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp ACAGATATGAGAATTGCCGATGCACAGGCCAGCCTGTGCTACCATATGTGGGCTTACCATATGTGGGCTTaGAAAAGATTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: TDMRIADAQASLCYHMWAYHMWA*KRFWIF
Trigger: GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTA...AGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS-3UTR CAA 90 bp GGGACCACATGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTACCATATGTGGGCTTaGAAAAGATTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: GTTCSSTGPDLSLFIDLLYHMWA*KRFWIF
Trigger: GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTA...CAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp GCAAGGTACCTTCTCATAAGGTCGAGCTGGATGACTGGCTGGGATAAAGGATACTACCATATGTGGGCTTaGAAAAGATTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: ARYLLIRSSWMTGWDKGYYHMWA*KRFWIF
Trigger: GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTA...GTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp CCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAATATTTGCAAATGAAATaGTTCTTCATGTTGCACCGG +
Preference number: 5 (lower is better)
Translates to: PSSTAHLYHCQVKLCPLKYLQMK*FFMLHR
Trigger: CCGGTGCAACATGAAGAACAATTTCATTTGCAAATA...TTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CAA 90 bp TGCTCATCCACAGGACCTGATCTAAGCTTGTTCATAGACCTTCTGTGTATTTTCGGACCTGATCTAAGCTaGTTCATAGACCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: CSSTGPDLSLFIDLLCIFGPDLS*FIDLLC
Trigger: ACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCC...GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AACAGAGGTGGTTTTCCAAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGTACCATATGTGGGCTTaGAAAAGATTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: NRGGFPSSTAHLYHCQVKYHMWA*KRFWIF
Trigger: GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTA...CTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS-3UTR CAA 90 bp AAGCTCCACAGCCCATCTTTATCACTGCCAGGTAAAGCTCTGTCCCTTAAAAGTTATTTGCAAATGAAATaGTTCTTCATGTTGCACCGG +
Preference number: 5 (lower is better)
Translates to: KLHSPSLSLPGKALSLKSYLQMK*FFMLHR
Trigger: CCGGTGCAACATGAAGAACAATTTCATTTGCAAATA...ACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000533265.5
CDS-3UTR CAA 90 bp CAGGCCAGCCTGTGCTACCATATGTGGGCTTTGAAAAGATTCTGGATTTTCTGTTACCATATGTGGGCTTaGAAAAGATTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: QASLCYHMWALKRFWIFCYHMWA*KRFWIF
Trigger: GAAAATCCAGAATCTTTTCAAAGCCCACATATGGTA...ACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS CCA 72 bp CCCCCGACACTCGGGCGCTACGGCGGTGGAGCGGGCTaGCGGGCAGAGGCGTGCGCGACAACTGCAACCGCG +
Preference number: 6 (lower is better)
Translates to: PPTLGRYGGGAG*RAEACATTATA
Trigger: CGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCAGCCCGCTCCACCGCCGTAGCGCCCGAGTGTCGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
ENST00000533265.5
CDS GCA 72 bp TGGAGCGGGCTGGCGGGCAGAGGCGTGCGCGACAACTaGAACCGCGGCAGCAGCATCTCTAGGCCACCGACG +
Preference number: 6 (lower is better)
Translates to: WSGLAGRGVRDN*NRGSSISRPPT
Trigger: CGTCGGTGGCCTAGAGATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCCTCTGCCCGCCAGCCCGCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000436913.6
ENST00000525126.5
ENST00000525866.5
CDS TCA 72 bp TCTGTGTCCCTCCCCGGCAGACTGGCTGCCCTCCTCTaGGGTCCAAATCCGAGGCACTCAGCAGGCGACCCG +
Preference number: 6 (lower is better)
Translates to: SVSLPGRLAALL*GPNPRHSAGDP
Trigger: CGGGTCGCCTGCTGAGTGCCTCGGATTTGGACCTCAGAGGAGGGCAGCCAGTCTGCCGGGGAGGGACACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375615.7
ENST00000525126.5
CDS TCA 72 bp CTCCGATGCCAGCGGGTGCCGATGGCTGATGGTACATaGCCACGCAGACCTCGCTGCCGCAGGATGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LRCQRVPMADGT*PRRPRCRRMAH
Trigger: ATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCATCGGCACCCGCTGGCATCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000528102.2
ENST00000530962.5
ENST00000533265.5
ENST00000533999.5
CDS CCA 72 bp GAACATGTAGGGGCCTCCGATGCCAGCGGGTGCCGATaGCTGATGGTACATGACCACGCAGACCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: EHVGASDASGCR*LMVHDHADLAA
Trigger: GGCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACATGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000528102.2
ENST00000530962.5
ENST00000533265.5
ENST00000533999.5
CDS GCA 72 bp CCACTGGAACATGTAGGGGCCTCCGATGCCAGCGGGTaGCGATGGCTGATGGTACATGACCACGCAGACCTC +
Preference number: 6 (lower is better)
Translates to: PLEHVGASDASG*RWLMVHDHADL
Trigger: GAGGTCTGCGTGGTCATGTACCATCAGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACATGTTCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375614.7
ENST00000375615.7
ENST00000525126.5
ENST00000528102.2
ENST00000530962.5
ENST00000533265.5
ENST00000533999.5
CDS CCA 72 bp GAGGAAGGAAGCAGAGAGTCATTCCCCGGAGTCAGGTaGGGCTCGTCCCACACTAACTGGAGTTCTTTCCCG +
Preference number: 6 (lower is better)
Translates to: EEGSRESFPGVR*GSSHTNWSSFP
Trigger: CGGGAAAGAACTCCAGTTAGTGTGGGACGAGCCCCACCTGACTCCGGGGAATGACTCTCTGCTTCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528924.4
ENST00000530962.5
CDS CCA 72 bp TTCCCCGGAGTCAGGTGGGGCTCGTCCCACACTAACTaGAGTTCTTTCCCGATCTCTAAGCGCTCTCATACC +
Preference number: 6 (lower is better)
Translates to: FPGVRWGSSHTN*SSFPISKRSHT
Trigger: GGTATGAGAGCGCTTAGAGATCGGGAAAGAACTCCAGTTAGTGTGGGACGAGCCCCACCTGACTCCGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528924.4
ENST00000530962.5
CDS CAA 72 bp AGGTTGAGGTCTATAAACTGTTTCAATGGGGCTTCCTaGTTCCCTTGTTCTTTGGTCTCTGATTGGACATCA +
Preference number: 6 (lower is better)
Translates to: RLRSINCFNGAS*FPCSLVSDWTS
Trigger: TGATGTCCAATCAGAGACCAAAGAACAAGGGAACAAGGAAGCCCCATTGAAACAGTTTATAGACCTCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528102.2
CDS CAA 72 bp AACTGTTTCAATGGGGCTTCCTTGTTCCCTTGTTCTTaGGTCTCTGATTGGACATCAGAATATTTGCAAATG +
Preference number: 6 (lower is better)
Translates to: NCFNGASLFPCS*VSDWTSEYLQM
Trigger: CATTTGCAAATATTCTGATGTCCAATCAGAGACCAAAGAACAAGGGAACAAGGAAGCCCCATTGAAACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528102.2