RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAT (Homo sapiens)

Ensembl gene IDs: ENSG00000213658

Ensembl transcript IDs: ENST00000354453.7, ENST00000360872.9, ENST00000395456.7, ENST00000395461.7, ENST00000454369.6, ENST00000562472.5, ENST00000562701.5, ENST00000563964.5, ENST00000564277.5, ENST00000564447.5, ENST00000566270.5, ENST00000566415.1, ENST00000570232.2, ENST00000630764.2

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGGGCGGCAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTaGGACACATTCACATACTCCCGGCTGCCATCCAGAGACGCTTCT +
Preference number: 1 (lower is better)
Translates to: LRAAGSVLAAPGCSS*DTFTYSRLPSRDAS
Trigger: AGAAGCGTCTCTGGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR CCA 90 bp CTAAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTaGGACTGTCTCATGGGGCAATGTGTCCTCACCCCCAGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: LRMVKPLSQPAAAVF*DCLMGQCVLTPSSA
Trigger: GGCACTGCTGGGGGTGAGGACACATTGCCCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR GCA 90 bp ATCCCTTGGTCTAAGGATGGTGAAACCATTGTCACAGCCAGCAGCTaGCGTGTTCTGGGACTGTCTCATGGGGCAATGTGTCCTCACCCC +
Preference number: 1 (lower is better)
Translates to: IPWSKDGETIVTASS*RVLGLSHGAMCPHP
Trigger: GGGGTGAGGACACATTGCCCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAGACCAAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR-3UTR CCA 90 bp GCTGATGGGGCAGCAGTGCTAGTGGCCGGGGTGCTGTCAGGAAGCACCACCAGGATCCCGCCGGGAAGATaGCGTCCGGTGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: ADGAAVLVAGVLSGSTTRIPPGR*RPVGAP
Trigger: GGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGAT...CCTGGTGGTGCTTCCTGACAGCACCCCGGCCACTAGCACTGCTGCCCCATCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR-3UTR CCA 90 bp GCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGCGTCCCAGGCAAGCCTaGTTCCAGGACAGACTCGGC +
Preference number: 2 (lower is better)
Translates to: AGARAGHSQAASEGAERSRPRQA*FQDRLG
Trigger: GCCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACG...CGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
3UTR-3UTR CCA 90 bp AGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACACGTCCCAGGCAAGCCTaGTTCCAGGACAGACTCGGC +
Preference number: 2 (lower is better)
Translates to: RAGHSQAASEGAERSGDTRPRQA*FQDRLG
Trigger: GCCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACG...TGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
3UTR-3UTR CCA 90 bp TTAGCCGCTCCAGGATGCAGTTCCTGGGACACATTCACATACTCCCGGCTGCCAGAAGATGGCGTCCGGTaGGAGCCCCCAAGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: LAAPGCSSWDTFTYSRLPEDGVR*EPPRGC
Trigger: GCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTC...TGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR-3UTR TCA 90 bp GGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 2 (lower is better)
Translates to: GETIVTASSCRVLGLSHGGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...CCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR-3UTR TCA 90 bp TGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 2 (lower is better)
Translates to: CRAFGGHRPNPKVIISYGGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...CCCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
3UTR-3UTR TCA 90 bp AGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 2 (lower is better)
Translates to: RHTQAFILLHRVGLGPGQGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...CTGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
3UTR-3UTR CCA 90 bp GCATCCTCACAGGCTGGTTCTGGGGGTAACGACACAGGGGTCAGCCTAGTCCAGAGCTCGCCACACTGTTaGCACCATCAGAATCCCGCC +
Preference number: 2 (lower is better)
Translates to: ASSQAGSGGNDTGVSLVQSSPHC*HHQNPA
Trigger: GGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCT...CTGGACTAGGCTGACCCCTGTGTCGTTACCCCCAGAACCAGCCTGTGAGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR-3UTR GCA 90 bp GGTCTAAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACAC +
Preference number: 2 (lower is better)
Translates to: GLRMVKPLSQPAAAVFWDGCVRR*RAFGGH
Trigger: GTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC...GTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR-3UTR CCA 90 bp CTCCACTTCCTCTGCCTCCTGGGAACTCAGGGCGGCAGGCTCAGTCTTAGCCGCCCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 2 (lower is better)
Translates to: LHFLCLLGTQGGRLSLSRPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...GCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR-3UTR GCA 90 bp AGTTCAGCTCCTGCAGATTCTCGTAATCTGGAGCCCCCTCTTCCTCCACTTCCTATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 2 (lower is better)
Translates to: SSAPADSRNLEPPLPPLPIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...AGGAAGTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTGCAGGAGCTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR CAA 90 bp CCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGGTGAAACCATaGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGG +
Preference number: 2 (lower is better)
Translates to: PGHQVPSLGLRMVKP*SQPAAAVFWDCLMG
Trigger: CCCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAGACCAAGGGATGGGACCTGATGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR-3UTR TCA 90 bp CCACAAAAGGTAAGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGTCACAGCACCTGGCTaGGCCCCCATGGAGGATGGA +
Preference number: 2 (lower is better)
Translates to: PQKVRTKRVLPGHQVPSLVTAPG*APMEDG
Trigger: TCCATCCTCCATGGGGGCTCAGCCAGGTGCTGTGAC...AAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCTTACCTTTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR-3UTR CCA 90 bp CAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTACGTCCCAGGCAAGCCTaGTTCCAGGACAGACTCGGC +
Preference number: 2 (lower is better)
Translates to: QTHAQHRHTQAFILLHRVRPRQA*FQDRLG
Trigger: GCCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACG...TACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR-3UTR CCA 90 bp TCAGTTCAGCTCCTGCAGATTCTCGTAATCTGGAGCCCCCTCTTCCTCCACTTCCATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 2 (lower is better)
Translates to: SVQLLQILVIWSPLFLHFHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...GAAGTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTGCAGGAGCTGAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR-3UTR CCA 90 bp TCAGTTCAGCTCCTGCAGATTCTCGTAATCTGGAGCCCCCTCTTCCTCCACTTCTCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 2 (lower is better)
Translates to: SVQLLQILVIWSPLFLHFSRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...GAAGTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTGCAGGAGCTGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR GCA 72 bp GGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACACAGGCCGAACCCCAAA +
Preference number: 3 (lower is better)
Translates to: GQGRSFSGCVRR*RAFGGHRPNPK
Trigger: TTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
3UTR-3UTR CAA 90 bp CAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: QVILRLRQKVQSVRGTQAGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...GGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
3UTR GCA 72 bp CTCAGGGCGGCAGGCTCAGTCTTAGCCGCTCCAGGATaGAGTTCCTGGGACACATTCACATACTCCCGGCTG +
Preference number: 3 (lower is better)
Translates to: LRAAGSVLAAPG*SSWDTFTYSRL
Trigger: CAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR CCA 72 bp GTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTaGGACTGTCTCATGGGGCAATGTGTCCTCACCCCC +
Preference number: 3 (lower is better)
Translates to: VKPLSQPAAAVF*DCLMGQCVLTP
Trigger: GGGGGTGAGGACACATTGCCCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR CCA 72 bp GCAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTaGGACACATTCACATACTCCCGGCTGCCATCCAGA +
Preference number: 3 (lower is better)
Translates to: AGSVLAAPGCSS*DTFTYSRLPSR
Trigger: TCTGGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
3UTR-3UTR CAA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
3UTR-3UTR CAA 90 bp GATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: DGETIVTASSCRVLGLSHGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...ATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
3UTR GCA 72 bp TCTAAGGATGGTGAAACCATTGTCACAGCCAGCAGCTaGCGTGTTCTGGGACTGTCTCATGGGGCAATGTGT +
Preference number: 3 (lower is better)
Translates to: SKDGETIVTASS*RVLGLSHGAMC
Trigger: ACACATTGCCCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GGCACCATCAGAATCCCGCCGGGAAGATGGCGTCCGGTGGGAGCCCCCAAGGGGGTAGGAGGTGACAGGTaGGTAGGCAGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTIRIPPGRWRPVGAPKGVGGDR*VGRWPG
Trigger: CCCTGGCCACCTGCCTACCCACCTGTCACCTCCTAC...CCCCTTGGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGATTCTGATGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp CTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGATCCCGCCGGGAAGATaGCGTCCGGTGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LGPGQVILRLRQKVQSVRIPPGR*RPVGAP
Trigger: GGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGAT...CCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATCCCGCCGGGAAGATaGCGTCCGGTGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GCVRRCRAFGGHRPNPKVIPPGR*RPVGAP
Trigger: GGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGAT...CACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CTCCACTTCCTCTGCCTCCTGGGAACTCAGGGCGGCAGGCTCAGTCTTAGCCGCATCCCGCCGGGAAGATaGCGTCCGGTGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LHFLCLLGTQGGRLSLSRIPPGR*RPVGAP
Trigger: GGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGAT...GCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp GGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGCAGGTAGGCACCAGGTaGCAGGGGAGCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GCVRRCRAFGGHRPNPKVQVGTR*QGSPGG
Trigger: TCCTCCCGGGCTCCCCTGCCACCTGGTGCCTACCTG...CACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR CCA 90 bp AGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTCAGGTAGGCACCAGGTaGCAGGGGAGCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RAGARAGHSQAASEGAERQVGTR*QGSPGG
Trigger: TCCTCCCGGGCTCCCCTGCCACCTGGTGCCTACCTG...ACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR CCA 90 bp TGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGAAGATGGCGTCCGGTaGGAGCCCCCAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WGQGRSFSGCVRRCRAFGEDGVR*EPPRGC
Trigger: GCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTC...CCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR TCA 90 bp CTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGCAGATGAAGATGGGGTaGGGACCGGACCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGPGQVILRLRQKVQSVRQMKMG*GPDPAG
Trigger: CCCTGCCGGGTCCGGTCCTCACCCCATCTTCATCTG...CCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR TCA 90 bp GCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: AGARAGHSQAASEGAERSGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...CGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR TCA 90 bp TCCAGCTGCCCAGCTCAGCCGTCCCAGGCAAGCCTGGTTCCAGGACAGACTCGGGTCACAGCACCTGGCTaGGCCCCCATGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SSCPAQPSQASLVPGQTRVTAPG*APMEDG
Trigger: TCCATCCTCCATGGGGGCTCAGCCAGGTGCTGTGAC...CCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACGGCTGAGCTGGGCAGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGTCAGACCAGGGCCTaGGCTGAAGTCGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: LGPGQVILRLRQKVQSVRGQTRA*AEVGGS
Trigger: GGATCCCCCGACTTCAGCCCAGGCCCTGGTCTGACC...CCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGAGGTGGGTAGGCAGGTaGCCAGGGGGCAACCGTGTG +
Preference number: 4 (lower is better)
Translates to: GCVRRCRAFGGHRPNPKVRWVGR*PGGNRV
Trigger: CACACGGTTGCCCCCTGGCCACCTGCCTACCCACCT...CACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACAGGTGGGTAGGCAGGTaGCCAGGGGGCAACCGTGTG +
Preference number: 4 (lower is better)
Translates to: ARAGHSQAASEGAERSGDRWVGR*PGGNRV
Trigger: CACACGGTTGCCCCCTGGCCACCTGCCTACCCACCT...GTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACGCGGGGATCTTGGGATaGGGAGCAGGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ARAGHSQAASEGAERSGDAGILG*GAGLAG
Trigger: GCCAGCCAGACCTGCTCCCCATCCCAAGATCCCCGC...GTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGCTGCGGGGATCTTaGGATGGGGAGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGPGQVILRLRQKVQSVRGLRGS*DGEQVW
Trigger: CCAGACCTGCTCCCCATCCCAAGATCCCCGCAGCCC...CCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CTCCCGGCTGCCATCCAGAGACGCTTCTGCGCTCTCCCCGCTCTCCGGAACGTTACTTCCTCTGCCTCCTaGGAACTCAGGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPAAIQRRFCALPALRNVTSSAS*ELRAAG
Trigger: GCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGT...AACGTTCCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGATGGCAGCCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp TCCACTTCCTCTGCCTCCTGGGAACTCAGGGCGGCAGGCTCAGTCTTAGCCGCTGAAGATGGCGTCCGGTaGGAGCCCCCAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: STSSASWELRAAGSVLAAEDGVR*EPPRGC
Trigger: GCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTC...AGCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR TCA 90 bp GGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGACAGATGAAGATGGGGTaGGGACCGGACCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GHSQAASEGAERSGDTGRQMKMG*GPDPAG
Trigger: CCCTGCCGGGTCCGGTCCTCACCCCATCTTCATCTG...TCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp AGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTGTCACAGCACCTGGCTaGGCCCCCATGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: RAGARAGHSQAASEGAERVTAPG*APMEDG
Trigger: TCCATCCTCCATGGGGGCTCAGCCAGGTGCTGTGAC...ACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp CAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGATGGCCTCCTCCATCTaGAGGGGAGCTCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QAASEGAERSGDTGRTPKMASSI*RGARSR
Trigger: CCTGCTCCGAGCTCCCCTGCAGATGGAGGAGGCCAT...CTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp GGCACCATCAGAATCCCGCCGGGAAGATGGCGTCCGGTGGGAGCCCCCAAGGGGGGCAGTCTGTGGCAGTaGACACACAGTGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: GTIRIPPGRWRPVGAPKGGSLWQ*THSAIN
Trigger: GTTGATGGCACTGTGTGTGCACTGCCACAGACTGCC...CCCCTTGGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGATTCTGATGGTGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR GCA 90 bp CTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LGPGQVILRLRQKVQSVRIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...CCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR GCA 90 bp AGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RAGARAGHSQAASEGAERGCVRR*RAFGGH
Trigger: GTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC...ACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR GCA 90 bp GCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: AGARAGHSQAASEGAERSGCVRR*RAFGGH
Trigger: GTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC...CGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAGGTCAGACCAGGGCCTaGGCTGAAGTCGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: GHSQAASEGAERSGDTGRGQTRA*AEVGGS
Trigger: GGATCCCCCGACTTCAGCCCAGGCCCTGGTCTGACC...TCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR CCA 90 bp TCCAGCTGCCCAGCTCAGCCGTCCCAGGCAAGCCTGGTTCCAGGACAGACTCGGGCTGTCGTAGGAGCCTaGCAGTCTGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SSCPAQPSQASLVPGQTRAVVGA*QSVAVH
Trigger: GTGCACTGCCACAGACTGCCAGGCTCCTACGACAGC...CCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACGGCTGAGCTGGGCAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGGCTGTCGTAGGAGCCTaGCAGTCTGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: GPGQVILRLRQKVQSVRGAVVGA*QSVAVH
Trigger: GTGCACTGCCACAGACTGCCAGGCTCCTACGACAGC...CCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp TCCACTTCCTCTGCCTCCTGGGAACTCAGGGCGGCAGGCTCAGTCTTAGCCGCTAGGTGGGTAGGCAGGTaGCCAGGGGGCAACCGTGTG +
Preference number: 4 (lower is better)
Translates to: STSSASWELRAAGSVLAARWVGR*PGGNRV
Trigger: CACACGGTTGCCCCCTGGCCACCTGCCTACCCACCT...AGCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp GCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGATGGGGAGCAGGTCTaGCTGGCTCAGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: AGARAGHSQAASEGAERSDGEQV*LAQGWV
Trigger: TACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATC...CGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp AGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTGATGGGGAGCAGGTCTaGCTGGCTCAGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: RAGARAGHSQAASEGAERDGEQV*LAQGWV
Trigger: TACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATC...ACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp TGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGATGGGGAGCAGGTCTaGCTGGCTCAGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: WGQGRSFSGCVRRCRAFGDGEQV*LAQGWV
Trigger: TACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATC...CCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCACTTCCTCTGCCTCCTaGGAACTCAGGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GWGQGRSFSGCVRRCRAFTSSAS*ELRAAG
Trigger: GCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGT...GAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCCGTCCCAGGCAAGCCTaGTTCCAGGACAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSRPRQA*FQDRLG
Trigger: GCCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACG...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGCGTCCCAGGCAAGCCTaGTTCCAGGACAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: GCVRRCRAFGGHRPNPKVRPRQA*FQDRLG
Trigger: GCCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACG...CACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGCGTCCCAGGCAAGCCTaGTTCCAGGACAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: LGPGQVILRLRQKVQSVRRPRQA*FQDRLG
Trigger: GCCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACG...CCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp AGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTGGGTGTCACAGCACCTaGCTGAGCCCCCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: RAGARAGHSQAASEGAERGCHST*LSPHGG
Trigger: TCCTCCATGGGGGCTCAGCCAGGTGCTGTGACACCC...ACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCCAGCCACCTGCCAGCTaGCAGCCGTGGCCTCCATAT +
Preference number: 4 (lower is better)
Translates to: GWGQGRSFSGCVRRCRAFQPPAS*QPWPPY
Trigger: ATATGGAGGCCACGGCTGCCAGCTGGCAGGTGGCTG...GAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395461.7
CDS-3UTR TCA 90 bp ATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCGACCAGGGCCTGGGCTaGAGTCGGGGGATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: ILRLRQKVQSVRGTQAEPDQGLG*SRGIQL
Trigger: TAACTGGATCCCCCGACTTCAGCCCAGGCCCTGGTC...GGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp AGAGTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGGTCACAGCACCTGGCTaGGCCCCCATGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: RVGLGPGQVILRLRQKVQVTAPG*APMEDG
Trigger: TCCATCCTCCATGGGGGCTCAGCCAGGTGCTGTGAC...CTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp CAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCATGGCCTCCTCCATCTaGAGGGGAGCTCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVILRLRQKVQSVRGTQAMASSI*RGARSR
Trigger: CCTGCTCCGAGCTCCCCTGCAGATGGAGGAGGCCAT...GGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp AGAGTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RVGLGPGQVILRLRQKVQIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...CTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR GCA 90 bp GGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GHSQAASEGAERSGDTGRIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...TCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR GCA 90 bp GGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GQVILRLRQKVQSVRGTQIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...CTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR GCA 90 bp AGAGTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RVGLGPGQVILRLRQKVQGCVRR*RAFGGH
Trigger: GTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC...CTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR GCA 90 bp AGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RSFSGCVRRCRAFGGHRPGCVRR*RAFGGH
Trigger: GTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC...CGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGCTGTCGTAGGAGCCTaGCAGTCTGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGARAGHSQAASEGAERSAVVGA*QSVAVH
Trigger: GTGCACTGCCACAGACTGCCAGGCTCCTACGACAGC...CGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp ATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCGTAGGAGGTGACAGGTaGGTAGGCAGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILRLRQKVQSVRGTQAEPVGGDR*VGRWPG
Trigger: CCCTGGCCACCTGCCTACCCACCTGTCACCTCCTAC...GGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp AGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGGTAGGAGGTGACAGGTaGGTAGGCAGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSFSGCVRRCRAFGGHRPVGGDR*VGRWPG
Trigger: CCCTGGCCACCTGCCTACCCACCTGTCACCTCCTAC...CGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp AGAGTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGGTAGGAGGTGACAGGTaGGTAGGCAGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RVGLGPGQVILRLRQKVQVGGDR*VGRWPG
Trigger: CCCTGGCCACCTGCCTACCCACCTGTCACCTCCTAC...CTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp AGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGGCTGCGGGGATCTTaGGATGGGGAGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RAGHSQAASEGAERSGDTGLRGS*DGEQVW
Trigger: CCAGACCTGCTCCCCATCCCAAGATCCCCGCAGCCC...TGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCACTTCCTCTGCCTCCTaGGAACTCAGGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGHSQAASEGAERSGDTGTSSAS*ELRAAG
Trigger: GCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGT...GCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGGGTGTCACAGCACCTaGCTGAGCCCCCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: GQVILRLRQKVQSVRGTQGCHST*LSPHGG
Trigger: TCCTCCATGGGGGCTCAGCCAGGTGCTGTGACACCC...CTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR TCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGAGTGTGCGTCCAGCTaGCTGTGGAAAGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSECASS*LWKVPA
Trigger: AGCAGGGACTTTCCACAGTCAGCTGGACGCACACTC...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp GGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGAGTGTGCGTCCAGCTaGCTGTGGAAAGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GWGQGRSFSGCVRRCRAFECASS*LWKVPA
Trigger: AGCAGGGACTTTCCACAGTCAGCTGGACGCACACTC...GAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp GGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGCCTCTTTTACTGGGCTaGGTGTGCGTCCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: GPGQVILRLRQKVQSVRGPLLLG*VCVQLT
Trigger: AGTCAGCTGGACGCACACTCAGCCCAGTAAAAGAGG...CCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCAGAGTCAAGGCCAGATaGAGATGGGGTGAGGACCGG +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSRVKAR*RWGEDR
Trigger: CCGGTCCTCACCCCATCTTCATCTGGCCTTGACTCT...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp GGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCAGAGTCAAGGCCAGATaGAGATGGGGTGAGGACCGG +
Preference number: 4 (lower is better)
Translates to: GWGQGRSFSGCVRRCRAFRVKAR*RWGEDR
Trigger: CCGGTCCTCACCCCATCTTCATCTGGCCTTGACTCT...GAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR CCA 90 bp ACTCAGGGCGGCAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTGGGACACGAGCCTGGCAGTCTGTaGCAGTGCACACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQGGRLSLSRSRMQFLGHEPGSL*QCTHSA
Trigger: GGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTC...GTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp ACTCAGGGCGGCAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTGGGACACGCTGTCGTAGGAGCCTaGCAGTCTGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TQGGRLSLSRSRMQFLGHAVVGA*QSVAVH
Trigger: GTGCACTGCCACAGACTGCCAGGCTCCTACGACAGC...GTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp TGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAAGGTGGGTAGGCAGGTaGCCAGGGGGCAACCGTGTG +
Preference number: 4 (lower is better)
Translates to: CVRRCRAFGGHRPNPKVIRWVGR*PGGNRV
Trigger: CACACGGTTGCCCCCTGGCCACCTGCCTACCCACCT...TATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp CTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATGGGTGTCACAGCACCTaGCTGAGCCCCCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRQKVQSVRGTQAEPQSDGCHST*LSPHGG
Trigger: TCCTCCATGGGGGCTCAGCCAGGTGCTGTGACACCC...ATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGCAGCTGCCGTGTTCTaGGACTGTCTCATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSAAAVF*DCLMGQ
Trigger: TTGCCCCATGAGACAGTCCCAGAACACGGCAGCTGC...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGATCCCGCCGGGAAGATaGCGTCCGGTGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRIPPGR*RPVGAP
Trigger: GGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGAT...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGAGCTCGCCACACTGTTaGCACCATCAGAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: QAASEGAERSGDTGRTPKSSPHC*HHQNPA
Trigger: GGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCT...CTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR TCA 90 bp TGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAGACCAGGGCCTGGGCTaGAGTCGGGGGATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: CVRRCRAFGGHRPNPKVIDQGLG*SRGIQL
Trigger: TAACTGGATCCCCCGACTTCAGCCCAGGCCCTGGTC...TATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CTCCCGGCTGCCATCCAGAGACGCTTCTGCGCTCTCCCCGCTCTCCGGAACGTTGCAGTGCACACACAGTaGCATCAACATGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPAAIQRRFCALPALRNVAVHTQ*HQHGQD
Trigger: ATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGC...AACGTTCCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGATGGCAGCCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR GCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGGCAGTCTGTGGCAGTaGACACACAGTGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSGSLWQ*THSAIN
Trigger: GTTGATGGCACTGTGTGTGCACTGCCACAGACTGCC...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp GGTCTAAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTCGGAGCAGGCTGGCTaGACCCCTAGGCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GLRMVKPLSQPAAAVFWDSEQAG*TPRPQG
Trigger: CCCTTGGGGCCTAGGGGTGCAGCCAGCCTGCTCCGA...GTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395461.7
CDS-3UTR CCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCACAGTGCCATCAACATaGCCAGGATGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSTVPST*PGWAAA
Trigger: TGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGT...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGTGCCATCAACATaGCCAGGATGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ARAGHSQAASEGAERSGDTVPST*PGWAAA
Trigger: TGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGT...GTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp CTCCACTTCCTCTGCCTCCTGGGAACTCAGGGCGGCAGGCTCAGTCTTAGCCGCACAGTGCCATCAACATaGCCAGGATGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHFLCLLGTQGGRLSLSRTVPST*PGWAAA
Trigger: TGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGT...GCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp GCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACCACCACCAGGTAGCCTaGGTTGTGATAGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ARAGHSQAASEGAERSGDHHQVA*VVIVVL
Trigger: GAGGACGACTATCACAACCCAGGCTACCTGGTGGTG...GTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGAGCCCCCATGGAGGATaGAGACCCACAGATACACAC +
Preference number: 4 (lower is better)
Translates to: QAASEGAERSGDTGRTPKSPHGG*RPTDTH
Trigger: GTGTGTATCTGTGGGTCTCCATCCTCCATGGGGGCT...CTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp TGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGAAGATGGCGTCCGGTaGGAGCCCCCAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CRAFGGHRPNPKVIISYGEDGVR*EPPRGC
Trigger: GCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTC...CCCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GGTCTAAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACGAAGATGGCGTCCGGTaGGAGCCCCCAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRMVKPLSQPAAAVFWDEDGVR*EPPRGC
Trigger: GCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTC...GTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAGAAGATGGCGTCCGGTaGGAGCCCCCAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VRRCRAFGGHRPNPKVIIEDGVR*EPPRGC
Trigger: GCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTC...TATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp ATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCAGCTCGCCACACTGTTaGCACCATCAGAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: ILRLRQKVQSVRGTQAEPSSPHC*HHQNPA
Trigger: GGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCT...GGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGCTGCGGGGATGGGATaGGGAGCAGGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRAAGMG*GAGLAG
Trigger: GCCAGCCAGACCTGCTCCCCATCCCATCCCCGCAGC...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454369.6
CDS-3UTR CCA 90 bp TCCACTTCCTCTGCCTCCTGGGAACTCAGGGCGGCAGGCTCAGTCTTAGCCGCTGCTGCGGGGATCTTCTaGGAGTCAAAGGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: STSSASWELRAAGSVLAAAAGIF*ESKVRG
Trigger: ACCCCTGACCTTTGACTCCCAGAAGATCCCCGCAGC...AGCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR TCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGCAGATGAAGATGGGGTaGGGACCGGACCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRQMKMG*GPDPAG
Trigger: CCCTGCCGGGTCCGGTCCTCACCCCATCTTCATCTG...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp CAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: QTHAGLYSITQSRAGARAGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...TGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR TCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR GCA 90 bp GGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGCAGTGCACACACAGTaGCATCAACATGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GWGQGRSFSGCVRRCRAFAVHTQ*HQHGQD
Trigger: ATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGC...GAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CCACCAGGTAGCCTGGGTTGTGATAGTCGTCCTCATCCTCATCCGCATCCTCACATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PPGSLGCDSRPHPHPHPHIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...GTGAGGATGCGGATGAGGATGAGGACGACTATCACAACCCAGGCTACCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp GTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAGGTCAGACCAGGGCCTaGGCTGAAGTCGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: VRRCRAFGGHRPNPKVIIGQTRA*AEVGGS
Trigger: GGATCCCCCGACTTCAGCCCAGGCCCTGGTCTGACC...TATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCACAGTGCCATCAACATaGCCAGGATGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGHSQAASEGAERSGDTGTVPST*PGWAAA
Trigger: TGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGT...GCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp TGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAGAGCCTGGCAGTCTGTaGCAGTGCACACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: CVRRCRAFGGHRPNPKVIEPGSL*QCTHSA
Trigger: GGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTC...TATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp TCAATGGACTCCATGGAGAAGGCACTGTCTCGGATGCCAGGGGTGCTGAGTGCAGATGGGGAGCAGGTCTaGCTGGCTCAGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: SMDSMEKALSRMPGVLSADGEQV*LAQGWV
Trigger: TACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATC...TGCACTCAGCACCCCTGGCATCCGAGACAGTGCCTTCTCCATGGAGTCCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp AGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGGCGGGGATCTTGGGATaGGGAGCAGGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHTQAFILLHRVGLGPGQAGILG*GAGLAG
Trigger: GCCAGCCAGACCTGCTCCCCATCCCAAGATCCCCGC...CTGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGGCTGCGGGGATCTTaGGATGGGGAGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRGLRGS*DGEQVW
Trigger: CCAGACCTGCTCCCCATCCCAAGATCCCCGCAGCCC...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp ACTCAGGGCGGCAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTGGGACACCACCACCAGGTAGCCTaGGTTGTGATAGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TQGGRLSLSRSRMQFLGHHHQVA*VVIVVL
Trigger: GAGGACGACTATCACAACCCAGGCTACCTGGTGGTG...GTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp AGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTCAGATTCTCGTAATCTaGAGCCCCCTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RAGARAGHSQAASEGAERQILVI*SPLFLH
Trigger: GTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTG...ACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGCAGATTCTCGTAATCTaGAGCCCCCTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GCVRRCRAFGGHRPNPKVQILVI*SPLFLH
Trigger: GTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTG...CACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp ACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGAAGATGGCGTCCGGTaGGAGCCCCCAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQTHAGLYSITQSRAGAREDGVR*EPPRGC
Trigger: GCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTC...CCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS-3UTR CCA 90 bp ATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCGCATCCTCACAGGCTaGTTCCTCGTTCTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: ILRLRQKVQSVRGTQAEPRILTG*FLVLVA
Trigger: AGCTACGAGAACGAGGAACCAGCCTGTGAGGATGCG...GGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR TCA 90 bp TGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGACCAGGGCCTGGGCTaGAGTCGGGGGATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: CRAFGGHRPNPKVIISYGDQGLG*SRGIQL
Trigger: TAACTGGATCCCCCGACTTCAGCCCAGGCCCTGGTC...CCCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR GCA 90 bp TGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGATGGCCTCCTCCATCTaGAGGGGAGCTCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CRAFGGHRPNPKVIISYGMASSI*RGARSR
Trigger: CCTGCTCCGAGCTCCCCTGCAGATGGAGGAGGCCAT...CCCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGATGGCCTCCTCCATCTaGAGGGGAGCTCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRMASSI*RGARSR
Trigger: CCTGCTCCGAGCTCCCCTGCAGATGGAGGAGGCCAT...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp GGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAGCAGTGCACACACAGTaGCATCAACATGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GHSQAASEGAERSGDTGRAVHTQ*HQHGQD
Trigger: ATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGC...TCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp GCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCGCAGTGCACACACAGTaGCATCAACATGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: AGHSQAASEGAERSGDTGAVHTQ*HQHGQD
Trigger: ATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGC...GCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGAACTATCTGAGGATGTaGTGTCGTAGGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QAASEGAERSGDTGRTPKNYLRM*CRRSLA
Trigger: TGCCAGGCTCCTACGACAGCACATCCTCAGATAGTT...CTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGAACTATCTGAGGATGTaGTGTCGTAGGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGPGQVILRLRQKVQSVRNYLRM*CRRSLA
Trigger: TGCCAGGCTCCTACGACAGCACATCCTCAGATAGTT...CCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp CTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATACAGTGCCATCAACATaGCCAGGATGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRQKVQSVRGTQAEPQSDTVPST*PGWAAA
Trigger: TGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGT...ATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAGATGGGGAGCAGGTCTaGCTGGCTCAGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VRRCRAFGGHRPNPKVIIDGEQV*LAQGWV
Trigger: TACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATC...TATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp ACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCGGGGATCTTGGGATaGGGAGCAGGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQTHAGLYSITQSRAGARAGILG*GAGLAG
Trigger: GCCAGCCAGACCTGCTCCCCATCCCAAGATCCCCGC...CCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp AAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTGGGCTGCGGGGATCTTaGGATGGGGAGCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KDGETIVTASSCRVLGLSGLRGS*DGEQVW
Trigger: CCAGACCTGCTCCCCATCCCAAGATCCCCGCAGCCC...AGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp TGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGCATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: WGQGRSFSGCVRRCRAFGHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...CCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp AGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTCCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: RAGARAGHSQAASEGAERPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...ACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GTAGGGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCCCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: VGLGPGQVILRLRQKVQSPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...GCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGACTTCCTCTGCCTCCTaGGAACTCAGGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HRHTQAFILLHRVGLGPGTSSAS*ELRAAG
Trigger: GCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGT...CCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp AGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGACTTCCTCTGCCTCCTaGGAACTCAGGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RHTQAFILLHRVGLGPGQTSSAS*ELRAAG
Trigger: GCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGT...CTGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp GCTGCCATCCAGAGACGCTTCTGCGCTCTCCCCGCTCTCCGGAACGTTCACGTACAGATTCTCGTAATCTaGAGCCCCCTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AAIQRRFCALPALRNVHVQILVI*SPLFLH
Trigger: GTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTG...TACGTGAACGTTCCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGATGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp CAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCACGTCCCAGGCAAGCCTaGTTCCAGGACAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: QTHAGLYSITQSRAGARARPRQA*FQDRLG
Trigger: GCCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACG...TGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGGTGTCACAGCACCTaGCTGAGCCCCCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRGCHST*LSPHGG
Trigger: TCCTCCATGGGGGCTCAGCCAGGTGCTGTGACACCC...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCTCAGGTCCCATCCCTTaGTCTAAGGATGGTGAAACC +
Preference number: 4 (lower is better)
Translates to: GWGQGRSFSGCVRRCRAFSGPIP*SKDGET
Trigger: GGTTTCACCATCCTTAGACCAAGGGATGGGACCTGA...GAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp TGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGTCAGGTCCCATCCCTTaGTCTAAGGATGGTGAAACC +
Preference number: 4 (lower is better)
Translates to: WGQGRSFSGCVRRCRAFGSGPIP*SKDGET
Trigger: GGTTTCACCATCCTTAGACCAAGGGATGGGACCTGA...CCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp AGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTGCCAGCTGGCAGCCGTaGCCTCCATATCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: RRCRAFGGHRPNPKVIISASWQP*PPYPGP
Trigger: GGGTCCTGGATATGGAGGCCACGGCTGCCAGCTGGC...ACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395461.7
CDS-3UTR TCA 90 bp GCTGATGGGGCAGCAGTGCTAGTGGCCGGGGTGCTGTCAGGAAGCACCACCAGGTGGATACAAACTATCTaGGGATGTGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: ADGAAVLVAGVLSGSTTRWIQTI*GCAVVG
Trigger: TCCTACGACAGCACATCCTCAGATAGTTTGTATCCA...CCTGGTGGTGCTTCCTGACAGCACCCCGGCCACTAGCACTGCTGCCCCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR TCA 90 bp AGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: RTKRVLPGHQVPSLGLRMGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...CATCCTTAGACCAAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR TCA 90 bp CCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGGTGAAACCATTGTCACAGGGCAGGACGCCATGTaGGGACCCCAGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: PRSSGPIPWSKDGETIVTGQDAM*GPQSHF
Trigger: GAAGTGGCTCTGGGGTCCTCACATGGCGTCCTGCCC...TGTGACAATGGTTTCACCATCCTTAGACCAAGGGATGGGACCTGATGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp TGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAGGCAGTCTGTGGCAGTaGACACACAGTGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: CVRRCRAFGGHRPNPKVIGSLWQ*THSAIN
Trigger: GTTGATGGCACTGTGTGTGCACTGCCACAGACTGCC...TATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp AAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: KDGETIVTASSCRVLGLSGCVRR*RAFGGH
Trigger: GTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC...AGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp TGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGGGAGCCTGGCAGTCTGTaGCAGTGCACACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: CRAFGGHRPNPKVIISYGEPGSL*QCTHSA
Trigger: GGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTC...CCCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp CACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGGCTGTCGTAGGAGCCTaGCAGTCTGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: HRHTQAFILLHRVGLGPGAVVGA*QSVAVH
Trigger: GTGCACTGCCACAGACTGCCAGGCTCCTACGACAGC...CCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCCATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: QVILRLRQKVQSVRGTQAHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...GGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGACATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GHSQAASEGAERSGDTGRHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...TCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CACATACTCCCGGCTGCCATCCAGAGACGCTTCTGCGCTCTCCCCGCTCTCCGGTCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: HILPAAIQRRFCALPALRSRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGATGGCAGCCGGGAGTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp GCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: AGHSQAASEGAERSGDTGPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...GCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGCCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: GQVILRLRQKVQSVRGTQPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...CTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCTCAGGTCCCATCCCTTaGTCTAAGGATGGTGAAACC +
Preference number: 4 (lower is better)
Translates to: QVILRLRQKVQSVRGTQASGPIP*SKDGET
Trigger: GGTTTCACCATCCTTAGACCAAGGGATGGGACCTGA...GGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CCACCAGGTAGCCTGGGTTGTGATAGTCGTCCTCATCCTCATCCGCATCCTCACAGCTCGCCACACTGTTaGCACCATCAGAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: PPGSLGCDSRPHPHPHPHSSPHC*HHQNPA
Trigger: GGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCT...GTGAGGATGCGGATGAGGATGAGGACGACTATCACAACCCAGGCTACCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR TCA 90 bp GGCTGGGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCTGGATACAAACTATCTaGGGATGTGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GWGQGRSFSGCVRRCRAFWIQTI*GCAVVG
Trigger: TCCTACGACAGCACATCCTCAGATAGTTTGTATCCA...GAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGGTGAAACCATTGTCACAATGGCCTCCTCCATCTaGAGGGGAGCTCGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSSGPIPWSKDGETIVTMASSI*RGARSR
Trigger: CCTGCTCCGAGCTCCCCTGCAGATGGAGGAGGCCAT...TGTGACAATGGTTTCACCATCCTTAGACCAAGGGATGGGACCTGATGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp TGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAGCAGTGCACACACAGTaGCATCAACATGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CVRRCRAFGGHRPNPKVIAVHTQ*HQHGQD
Trigger: ATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGC...TATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp AGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RTKRVLPGHQVPSLGLRMIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...CATCCTTAGACCAAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp GGTCTAAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACGTCACAGCCAGCAGCTaGCGTGTTCTGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: GLRMVKPLSQPAAAVFWDVTASS*RVLGLS
Trigger: AGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGAC...GTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTTAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGAGGTGGGTAGGCAGGTaGCCAGGGGGCAACCGTGTG +
Preference number: 4 (lower is better)
Translates to: HRRTLNTDTRRPLFYYTERWVGR*PGGNRV
Trigger: CACACGGTTGCCCCCTGGCCACCTGCCTACCCACCT...CTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp ACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGGCGGGGATCTTGGGATaGGGAGCAGGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: THAQHRHTQAFILLHRVGAGILG*GAGLAG
Trigger: GCCAGCCAGACCTGCTCCCCATCCCAAGATCCCCGC...CCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGGCACCACCAGGTAGCCTaGGTTGTGATAGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VKPLSQPAAAVFWDCLMGHHQVA*VVIVVL
Trigger: GAGGACGACTATCACAACCCAGGCTACCTGGTGGTG...CCCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GCATCCTCACAGGCTGGTTCTGGGGGTAACGACACAGGGGTCAGCCTAGTCCAGCCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: ASSQAGSGGNDTGVSLVQPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...CTGGACTAGGCTGACCCCTGTGTCGTTACCCCCAGAACCAGCCTGTGAGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp AAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTAACTTCCTCTGCCTCCTaGGAACTCAGGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KVQSVRGTQAEPQSDNKLTSSAS*ELRAAG
Trigger: GCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGT...TAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR CCA 90 bp AGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGAGCTCGCCACACTGTTaGCACCATCAGAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: RHTQAFILLHRVGLGPGQSSPHC*HHQNPA
Trigger: GGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCT...CTGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR TCA 90 bp GGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGATGGATACAAACTATCTaGGGATGTGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GHSQAASEGAERSGDTGRWIQTI*GCAVVG
Trigger: TCCTACGACAGCACATCCTCAGATAGTTTGTATCCA...TCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR TCA 90 bp GACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGTCACAGCACCTGGCTaGGCCCCCATGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: DARSTQTHAGLYSITQSRVTAPG*APMEDG
Trigger: TCCATCCTCCATGGGGGCTCAGCCAGGTGCTGTGAC...CCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp CAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGGCAGTCTGTGGCAGTaGACACACAGTGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: QTHAGLYSITQSRAGARAGSLWQ*THSAIN
Trigger: GTTGATGGCACTGTGTGTGCACTGCCACAGACTGCC...TGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp AGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGGGCAGTCTGTGGCAGTaGACACACAGTGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: RHTQAFILLHRVGLGPGQGSLWQ*THSAIN
Trigger: GTTGATGGCACTGTGTGTGCACTGCCACAGACTGCC...CTGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGATCCAGAGACGCTTCTaGGCTCTCCCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HAQHRHTQAFILLHRVGLIQRRF*ALPALR
Trigger: CCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGAT...CAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS-3UTR GCA 90 bp CCACAAAAGGTAAGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGGCTGCGTCAGAAGGTaGAGAGCGTTCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PQKVRTKRVLPGHQVPSLGCVRR*RAFGGH
Trigger: GTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCC...AAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCTTACCTTTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp ACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGTCACAGCCAGCAGCTaGCGTGTTCTGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: TQTHAGLYSITQSRAGARVTASS*RVLGLS
Trigger: AGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGAC...CCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp TCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCGAGCCTGGCAGTCTGTaGCAGTGCACACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: STQTHAGLYSITQSRAGAEPGSL*QCTHSA
Trigger: GGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTC...GGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp AGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGGAGCCTGGCAGTCTGTaGCAGTGCACACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: RTKRVLPGHQVPSLGLRMEPGSL*QCTHSA
Trigger: GGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTC...CATCCTTAGACCAAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp ACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGTGGGTAGGCAGGTaGCCAGGGGGCAACCGTGTG +
Preference number: 4 (lower is better)
Translates to: TDARSTQTHAGLYSITQSRWVGR*PGGNRV
Trigger: CACACGGTTGCCCCCTGGCCACCTGCCTACCCACCT...ACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGGTAGGAGGTGACAGGTaGGTAGGCAGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HRRTLNTDTRRPLFYYTEVGGDR*VGRWPG
Trigger: CCCTGGCCACCTGCCTACCCACCTGTCACCTCCTAC...CTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CCACAAAAGGTAAGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGTAGGAGGTGACAGGTaGGTAGGCAGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PQKVRTKRVLPGHQVPSLVGGDR*VGRWPG
Trigger: CCCTGGCCACCTGCCTACCCACCTGTCACCTCCTAC...AAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCTTACCTTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGAGCTCGCCACACTGTTaGCACCATCAGAATCCCGCA +
Preference number: 4 (lower is better)
Translates to: HRHTQAFILLHRVGLGPGSSPHC*HHQNPA
Trigger: TGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCT...CCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354453.7
CDS-3UTR CCA 90 bp CACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCACCACCAGGTAGCCTaGGTTGTGATAGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: HRHTQAFILLHRVGLGPGHHQVA*VVIVVL
Trigger: GAGGACGACTATCACAACCCAGGCTACCTGGTGGTG...CCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS-3UTR CCA 90 bp AGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCAGCACCACCAGGTAGCCTaGGTTGTGATAGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RHTQAFILLHRVGLGPGQHHQVA*VVIVVL
Trigger: GAGGACGACTATCACAACCCAGGCTACCTGGTGGTG...CTGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCTCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QVILRLRQKVQSVRGTQASRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...GGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGCAGATTCTCGTAATCTaGAGCCCCCTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GETIVTASSCRVLGLSHGQILVI*SPLFLH
Trigger: GTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTG...CCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR TCA 90 bp ACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGCCTCTTTTACTGGGCTaGGTGTGCGTCCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: TQTHAGLYSITQSRAGARPLLLG*VCVQLT
Trigger: AGTCAGCTGGACGCACACTCAGCCCAGTAAAAGAGG...CCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354453.7
ENST00000395456.7
CDS-3UTR TCA 90 bp AGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTCCTCTTTTACTGGGCTaGGTGTGCGTCCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: RRCRAFGGHRPNPKVIISPLLLG*VCVQLT
Trigger: AGTCAGCTGGACGCACACTCAGCCCAGTAAAAGAGG...ACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
CDS-3UTR TCA 90 bp TCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGAGTCAAGGCCAGATaGAGATGGGGTGAGGACCGG +
Preference number: 4 (lower is better)
Translates to: STQTHAGLYSITQSRAGARVKAR*RWGEDR
Trigger: CCGGTCCTCACCCCATCTTCATCTGGCCTTGACTCT...GGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354453.7
ENST00000395456.7
CDS-3UTR GCA 90 bp AGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTGGCAGTCTGTGGCAGTaGACACACAGTGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: RRCRAFGGHRPNPKVIISGSLWQ*THSAIN
Trigger: GTTGATGGCACTGTGTGTGCACTGCCACAGACTGCC...ACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGGTGAAACCATTGTCACAGTCACAGCCAGCAGCTaGCGTGTTCTGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: PRSSGPIPWSKDGETIVTVTASS*RVLGLS
Trigger: AGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGAC...TGTGACAATGGTTTCACCATCCTTAGACCAAGGGATGGGACCTGATGACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp ACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGGAGCCTGGCAGTCTGTaGCAGTGCACACACAGTGCC +
Preference number: 4 (lower is better)
Translates to: THAQHRHTQAFILLHRVGEPGSL*QCTHSA
Trigger: GGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTC...CCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGGCATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: VKPLSQPAAAVFWDCLMGHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...CCCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp AGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTAGCCCCCATGGAGGATaGAGACCCACAGATACACAC +
Preference number: 4 (lower is better)
Translates to: RRCRAFGGHRPNPKVIISSPHGG*RPTDTH
Trigger: GTGTGTATCTGTGGGTCTCCATCCTCCATGGGGGCT...ACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGTCAGGTCCCATCCCTTaGTCTAAGGATGGTGAAACC +
Preference number: 4 (lower is better)
Translates to: GETIVTASSCRVLGLSHGSGPIP*SKDGET
Trigger: GGTTTCACCATCCTTAGACCAAGGGATGGGACCTGA...CCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp AGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTCGCATCCTCACAGGCTaGTTCCTCGTTCTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: RRCRAFGGHRPNPKVIISRILTG*FLVLVA
Trigger: AGCTACGAGAACGAGGAACCAGCCTGTGAGGATGCG...ACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp ACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTGCTGTCGTAGGAGCCTaGCAGTCTGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TDARSTQTHAGLYSITQSAVVGA*QSVAVH
Trigger: GTGCACTGCCACAGACTGCCAGGCTCCTACGACAGC...ACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCACATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: QTHAGLYSITQSRAGARAHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...TGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp GTCAGGAAGCACCACCAGGTAGCCTGGGTTGTGATAGTCGTCCTCATCCTCATCCATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: VRKHHQVAWVVIVVLILIHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...GATGAGGATGAGGACGACTATCACAACCCAGGCTACCTGGTGGTGCTTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR CCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGCCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp AAGGATGGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCAGATTCTCGTAATCTaGAGCCCCCTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KDGETIVTASSCRVLGLSQILVI*SPLFLH
Trigger: GTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTG...AGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CATCAGGTCCCATCCCTTGGTCTAAGGATGGTGAAACCATTGTCACAGCCAGCAAGCCCCCATGGAGGATaGAGACCCACAGATACACAC +
Preference number: 4 (lower is better)
Translates to: HQVPSLGLRMVKPLSQPASPHGG*RPTDTH
Trigger: GTGTGTATCTGTGGGTCTCCATCCTCCATGGGGGCT...TGCTGGCTGTGACAATGGTTTCACCATCCTTAGACCAAGGGATGGGACCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGGCAGCTGCCGTGTTCTaGGACTGTCTCATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HRRTLNTDTRRPLFYYTEAAAVF*DCLMGQ
Trigger: TTGCCCCATGAGACAGTCCCAGAACACGGCAGCTGC...CTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGAGCTCGCCACACTGTTaGCACCATCAGAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: HRRTLNTDTRRPLFYYTESSPHC*HHQNPA
Trigger: GGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCT...CTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS-3UTR CCA 90 bp AAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGCATCCTCACAGGCTaGTTCCTCGTTCTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: KVQSVRGTQAEPQSDNKLRILTG*FLVLVA
Trigger: AGCTACGAGAACGAGGAACCAGCCTGTGAGGATGCG...TAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp TCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCCGCATCCTCACAGGCTaGTTCCTCGTTCTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: STQTHAGLYSITQSRAGARILTG*FLVLVA
Trigger: AGCTACGAGAACGAGGAACCAGCCTGTGAGGATGCG...GGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS-3UTR GCA 90 bp AAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTAGCAGTGCACACACAGTaGCATCAACATGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: KVQSVRGTQAEPQSDNKLAVHTQ*HQHGQD
Trigger: ATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGC...TAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp AGTTCAGCTCCTGCAGATTCTCGTAATCTGGAGCCCCCTCTTCCTCCACTTCCTAACTATCTGAGGATGTaGTGTCGTAGGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSAPADSRNLEPPLPPLPNYLRM*CRRSLA
Trigger: TGCCAGGCTCCTACGACAGCACATCCTCAGATAGTT...AGGAAGTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTGCAGGAGCTGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562701.5
CDS-3UTR GCA 90 bp ACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTGTCACAGCCAGCAGCTaGCGTGTTCTGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: TDARSTQTHAGLYSITQSVTASS*RVLGLS
Trigger: AGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGAC...ACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGACAGTGCCATCAACATaGCCAGGATGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HRRTLNTDTRRPLFYYTETVPST*PGWAAA
Trigger: TGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGT...CTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGTCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GETIVTASSCRVLGLSHGSRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...CCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp AGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGCAGATTCTCGTAATCTaGAGCCCCCTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RTKRVLPGHQVPSLGLRMQILVI*SPLFLH
Trigger: GTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTG...CATCCTTAGACCAAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGCAGCTGCCGTGTTCTaGGACTGTCTCATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QTHAQHRHTQAFILLHRVAAAVF*DCLMGQ
Trigger: TTGCCCCATGAGACAGTCCCAGAACACGGCAGCTGC...TACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR TCA 90 bp CAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCATGGATACAAACTATCTaGGGATGTGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: QTHAGLYSITQSRAGARAWIQTI*GCAVVG
Trigger: TCCTACGACAGCACATCCTCAGATAGTTTGTATCCA...TGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR GCA 90 bp CATCAGGTCCCATCCCTTGGTCTAAGGATGGTGAAACCATTGTCACAGCCAGCAAACTATCTGAGGATGTaGTGTCGTAGGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HQVPSLGLRMVKPLSQPANYLRM*CRRSLA
Trigger: TGCCAGGCTCCTACGACAGCACATCCTCAGATAGTT...TGCTGGCTGTGACAATGGTTTCACCATCCTTAGACCAAGGGATGGGACCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR GCA 90 bp AGAACTAAGAGAGTCCTCCCAGGTCATCAGGTCCCATCCCTTGGTCTAAGGATGAACTATCTGAGGATGTaGTGTCGTAGGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RTKRVLPGHQVPSLGLRMNYLRM*CRRSLA
Trigger: TGCCAGGCTCCTACGACAGCACATCCTCAGATAGTT...CATCCTTAGACCAAGGGATGGGACCTGATGACCTGGGAGGACTCTCTTAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACGGTCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VQSVRGTQAEPQSDNKLRSRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...CCGTAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp CAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGCTGGGGCCAGGGCATCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QTHAGLYSITQSRAGARASRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...TGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp AAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTACCAGGATGCAGTTCCTaGGACACATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: KVQSVRGTQAEPQSDNKLPGCSS*DTFTYS
Trigger: GGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGG...TAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CCA 90 bp ACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGCCCCCATGGAGGATaGAGACCCACAGATACACAC +
Preference number: 4 (lower is better)
Translates to: TDARSTQTHAGLYSITQSSPHGG*RPTDTH
Trigger: GTGTGTATCTGTGGGTCTCCATCCTCCATGGGGGCT...ACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp CACAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGCATCAATGGACTCCATaGAGAAGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: HRRTLNTDTRRPLFYYTEHQWTP*RRHCLG
Trigger: TCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATG...CTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS-3UTR TCA 90 bp AAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTATGGATACAAACTATCTaGGGATGTGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: KVQSVRGTQAEPQSDNKLWIQTI*GCAVVG
Trigger: TCCTACGACAGCACATCCTCAGATAGTTTGTATCCA...TAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
CDS-3UTR TCA 90 bp ACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGTGGATACAAACTATCTaGGGATGTGCTGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: THAQHRHTQAFILLHRVGWIQTI*GCAVVG
Trigger: TCCTACGACAGCACATCCTCAGATAGTTTGTATCCA...CCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CCA 90 bp GACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGTCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: DARSTQTHAGLYSITQSRSRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...CCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS-3UTR CCA 90 bp ACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGGTCACGTAATCATCAATaGACTCCATGGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: THAQHRHTQAFILLHRVGSRNHQ*TPWRRH
Trigger: GTGCCTTCTCCATGGAGTCCATTGATGATTACGTGA...CCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000570232.2
CDS TCA 90 bp TGTGGAAAGTCCCTGCTCCCAGGGTGGTCAGACCAGGGCCTGGGCTaGAGTCGGGGGATCCAGTTACCCCTGCGTCCCAGCCCTACCTGC +
Preference number: 5 (lower is better)
Translates to: CGKSLLPGWSDQGLG*SRGIQLPLRPSPTC
Trigger: GCAGGTAGGGCTGGGACGCAGGGGTAACTGGATCCCCCGACTTCAGCCCAGGCCCTGGTCTGACCACCCTGGGAGCAGGGACTTTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000562472.5
ENST00000563964.5
ENST00000564277.5
ENST00000566270.5
ENST00000630764.2
CDS CCA 90 bp CTGACTGTGGAAAGTCCCTGCTCCCAGGGTGGTCAGACCAGGGCCTaGGCTGAAGTCGGGGGATCCAGTTACCCCTGCGTCCCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: LTVESPCSQGGQTRA*AEVGGSSYPCVPAL
Trigger: TAGGGCTGGGACGCAGGGGTAACTGGATCCCCCGACTTCAGCCCAGGCCCTGGTCTGACCACCCTGGGAGCAGGGACTTTCCACAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000562472.5
ENST00000563964.5
ENST00000564277.5
ENST00000566270.5
ENST00000630764.2
CDS CCA 90 bp AGGGATGTAGTGCGGCTCGGAGCAGTGGGAGTTTGGTGGCGTGTGTaGAGGGGACATGACACACTAGGCCCAGCAGGCACCTCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RDVVRLGAVGVWWRV*RGHDTLGPAGTSSP
Trigger: GGGGGAGGAGGTGCCTGCTGGGCCTAGTGTGTCATGTCCCCTCCACACACGCCACCAAACTCCCACTGCTCCGAGCCGCACTACATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 90 bp CTGGGGAGCAGGGATGTAGTGCGGCTCGGAGCAGTGGGAGTTTGGTaGCGTGTGTGGAGGGGACATGACACACTAGGCCCAGCAGGCACC +
Preference number: 5 (lower is better)
Translates to: LGSRDVVRLGAVGVW*RVWRGHDTLGPAGT
Trigger: GGTGCCTGCTGGGCCTAGTGTGTCATGTCCCCTCCACACACGCCACCAAACTCCCACTGCTCCGAGCCGCACTACATCCCTGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS TCA 90 bp CCCGGGATGGGTCCCCTCTTTTACTGGGCTGAGTGTGCGTCCAGCTaGCTGTGGAAAGTCCCTGCTCCCAGGGTGGTCAGACCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: PGMGPLFYWAECASS*LWKVPAPRVVRPGP
Trigger: AGGCCCTGGTCTGACCACCCTGGGAGCAGGGACTTTCCACAGTCAGCTGGACGCACACTCAGCCCAGTAAAAGAGGGGACCCATCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
ENST00000562472.5
ENST00000563964.5
ENST00000566270.5
ENST00000630764.2
CDS-3UTR CAA 90 bp GGGCCAGGGCAGGTCATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: GPGQVILRLRQKVQSVRGGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...CCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAATGACCTGCCCTGGCCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS CCA 90 bp CTGTGGAAAAGCCAGGCCCACCTCGGCACTGTGACCAGAGACCCTTaGCCACAGGTTCCCAGAGAACCCCCAACCTCAGCCATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LWKSQAHLGTVTRDP*PQVPREPPTSAMQS
Trigger: GCTCTGCATGGCTGAGGTTGGGGGTTCTCTGGGAACCTGTGGCCAAGGGTCTCTGGTCACAGTGCCGAGGTGGGCCTGGCTTTTCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS-3UTR CAA 90 bp TCCAGCTGCCCAGCTCAGCCGTCCCAGGCAAGCCTGGTTCCAGGACAGACTCGGAGGATGGTGAAACCATaGTCACAGCCAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSCPAQPSQASLVPGQTRRMVKP*SQPAAA
Trigger: GGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCT...CCGAGTCTGTCCTGGAACCAGGCTTGCCTGGGACGGCTGAGCTGGGCAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS CCA 90 bp CTCAGGGCGGCAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTaGGACACATTCACATACTCCCGGCTGCCATCTGTGGGGACAGAT +
Preference number: 5 (lower is better)
Translates to: LRAAGSVLAAPGCSS*DTFTYSRLPSVGTD
Trigger: ATCTGTCCCCACAGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566415.1
CDS-3UTR CAA 90 bp CTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LRQKVQSVRGTQAEPQSDGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...ATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CAA 90 bp ATTCTCAGGCTGCGTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCAGGATGGTGAAACCATaGTCACAGCCAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ILRLRQKVQSVRGTQAEPRMVKP*SQPAAA
Trigger: GGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCT...GGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGACGCAGCCTGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS TCA 90 bp ATCAATGGACTCCACTGTGGAAAAGCCAGGCCCACCTCGGCACTGTaGCCAGAGACCCTTGGCCACAGGTTCCCAGAGAACCCCCAACCT +
Preference number: 5 (lower is better)
Translates to: INGLHCGKARPTSAL*PETLGHRFPENPQP
Trigger: AGGTTGGGGGTTCTCTGGGAACCTGTGGCCAAGGGTCTCTGGTCACAGTGCCGAGGTGGGCCTGGCTTTTCCACAGTGGAGTCCATTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 90 bp CTTCTGCGCTCTCCCCGCTCTCCGGAACGTTCACGTAATCATCAATaGACTCCACTGTGGAAAAGCCAGGCCCACCTCGGCACTGTGACC +
Preference number: 5 (lower is better)
Translates to: LLRSPRSPERSRNHQ*TPLWKSQAHLGTVT
Trigger: GGTCACAGTGCCGAGGTGGGCCTGGCTTTTCCACAGTGGAGTCCATTGATGATTACGTGAACGTTCCGGAGAGCGGGGAGAGCGCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 90 bp TCGGCCTCCACAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTaGGACACATTCACATACTCCCGGCTGCCATCCAGAGACGCTTCT +
Preference number: 5 (lower is better)
Translates to: SASTGSVLAAPGCSS*DTFTYSRLPSRDAS
Trigger: AGAAGCGTCTCTGGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGTGGAGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570232.2
CDS TCA 90 bp TGGCATGATCTCGTCTCACTGCAACTTCCGCCTGCGGGGTTCAGATaGTCCGCCCATTTCAGCCTCCTGAGCAGCTGGGACTACAGGCAT +
Preference number: 5 (lower is better)
Translates to: WHDLVSLQLPPAGFR*SAHFSLLSSWDYRH
Trigger: ATGCCTGTAGTCCCAGCTGCTCAGGAGGCTGAAATGGGCGGATCATCTGAACCCCGCAGGCGGAAGTTGCAGTGAGACGAGATCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS-3UTR CAA 90 bp GGTGAAACCATTGTCACAGCCAGCAGCTGCCGTGTTCTGGGACTGTCTCATGGGGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: GETIVTASSCRVLGLSHGGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...CCCATGAGACAGTCCCAGAACACGGCAGCTGCTGGCTGTGACAATGGTTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CAA 90 bp GTCAGAAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: VRRCRAFGGHRPNPKVIIGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...TATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS TCA 90 bp GCAGGTGGCCAGGGGGCAACCGTGTCTGAGGACACAGAACCAAGTTaGAAGAAGGACTCCGGACATCGTCAAGGCCTCAAAGAACAGACT +
Preference number: 5 (lower is better)
Translates to: AGGQGATVSEDTEPS*KKDSGHRQGLKEQT
Trigger: AGTCTGTTCTTTGAGGCCTTGACGATGTCCGGAGTCCTTCTTTCAACTTGGTTCTGTGTCCTCAGACACGGTTGCCCCCTGGCCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS TCA 90 bp CTGGCACCCAAGGTAGGGGACCCTCCTTGTACTCACGAGGCCGTTTaGACTGGATGCCCCTTGGATACAAACTATCTGAGGATGTGCTGT +
Preference number: 5 (lower is better)
Translates to: LAPKVGDPPCTHEAV*TGCPLDTNYLRMCC
Trigger: ACAGCACATCCTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCGTGAGTACAAGGAGGGTCCCCTACCTTGGGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS-3UTR CAA 90 bp AAGGTGCAGAGCGTTCGGGGGACACAGGCCGAACCCCAAAGTGATAATAAGTTAGGATTTCTCAGGCTGTaGTCAGGCTGGAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: KVQSVRGTQAEPQSDNKLGFLRL*SGWSKG
Trigger: GCCCTTGCTCCAGCCTGACAACAGCCTGAGAAATCC...TAACTTATTATCACTTTGGGGTTCGGCCTGTGTCCCCCGAACGCTCTGCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
ENST00000454369.6
ENST00000570232.2
CDS-3UTR CAA 90 bp GACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAGGAGGATGGTGAAACCATaGTCACAGCCAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: DARSTQTHAGLYSITQSRRMVKP*SQPAAA
Trigger: GGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCT...CCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS-3UTR CAA 90 bp CAGACGCACGCTCAACACAGACACACGCAGGCCTTTATTCTATTACACAGAGTAAGGATGGTGAAACCATaGTCACAGCCAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: QTHAQHRHTQAFILLHRVRMVKP*SQPAAA
Trigger: GGCAGCTGCTGGCTGTGACAATGGTTTCACCATCCT...TACTCTGTGTAATAGAATAAAGGCCTGCGTGTGTCTGTGTTGAGCGTGCGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354453.7
ENST00000360872.9
ENST00000395456.7
ENST00000395461.7
CDS CCA 90 bp TGGATACAGTCTGGAGCTCAGGAGAGAGCAAACTGGGAATCTGGATaGCAAACAAAGCCAGGGTATAGAAGTGATAGCCCAGGACAAGTA +
Preference number: 5 (lower is better)
Translates to: WIQSGAQERANWESG*QTKPGYRSDSPGQV
Trigger: TACTTGTCCTGGGCTATCACTTCTATACCCTGGCTTTGTTTGCCATCCAGATTCCCAGTTTGCTCTCTCCTGAGCTCCAGACTGTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 90 bp AAAAGAAGTACTTGGATACAGTCTGGAGCTCAGGAGAGAGCAAACTaGGAATCTGGATGGCAAACAAAGCCAGGGTATAGAAGTGATAGC +
Preference number: 5 (lower is better)
Translates to: KRSTWIQSGAQERAN*ESGWQTKPGYRSDS
Trigger: GCTATCACTTCTATACCCTGGCTTTGTTTGCCATCCAGATTCCCAGTTTGCTCTCTCCTGAGCTCCAGACTGTATCCAAGTACTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 72 bp CCAAGACGGGGACAGCCACCTGCCAGCTGGCAGCCGTaGCCTCCATATCCAGGACCCGGGGAGGCAGCGAGC +
Preference number: 6 (lower is better)
Translates to: PRRGQPPASWQP*PPYPGPGEAAS
Trigger: GCTCGCTGCCTCCCCGGGTCCTGGATATGGAGGCCACGGCTGCCAGCTGGCAGGTGGCTGTCCCCGTCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395461.7
CDS TCA 72 bp TCCCTGCTCCCAGGGTGGTCAGACCAGGGCCTGGGCTaGAGTCGGGGGATCCAGTTACCCCTGCGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: SLLPGWSDQGLG*SRGIQLPLRPS
Trigger: GCTGGGACGCAGGGGTAACTGGATCCCCCGACTTCAGCCCAGGCCCTGGTCTGACCACCCTGGGAGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000562472.5
ENST00000563964.5
ENST00000564277.5
ENST00000566270.5
ENST00000630764.2
CDS CCA 72 bp GAAAGTCCCTGCTCCCAGGGTGGTCAGACCAGGGCCTaGGCTGAAGTCGGGGGATCCAGTTACCCCTGCGTC +
Preference number: 6 (lower is better)
Translates to: ESPCSQGGQTRA*AEVGGSSYPCV
Trigger: GACGCAGGGGTAACTGGATCCCCCGACTTCAGCCCAGGCCCTGGTCTGACCACCCTGGGAGCAGGGACTTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
ENST00000562472.5
ENST00000563964.5
ENST00000564277.5
ENST00000566270.5
ENST00000630764.2
CDS CCA 72 bp AGCCAGGCCCACCTCGGCACTGTGACCAGAGACCCTTaGCCACAGGTTCCCAGAGAACCCCCAACCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SQAHLGTVTRDP*PQVPREPPTSA
Trigger: GGCTGAGGTTGGGGGTTCTCTGGGAACCTGTGGCCAAGGGTCTCTGGTCACAGTGCCGAGGTGGGCCTGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 72 bp CCAGCTCAGGTCAAGGCCATGTGGGCAGCCCCAAGGTaGCAGGGGAAGTCTGAAGGTTCACGCTCACTCCCA +
Preference number: 6 (lower is better)
Translates to: PAQVKAMWAAPR*QGKSEGSRSLP
Trigger: TGGGAGTGAGCGTGAACCTTCAGACTTCCCCTGCCACCTTGGGGCTGCCCACATGGCCTTGACCTGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS CAA 90 bp ACTGTGGAAAAGCCAGGCCCACCTCGGCACTGTGACCAGAGACCCTaGGCCACAGGTTCCCAGAGAACCCCCAACCTCAGCCATGCAGAG +
Preference number: 6 (lower is better)
Translates to: TVEKPGPPRHCDQRP*ATGSQRTPNLSHAE
Trigger: CTCTGCATGGCTGAGGTTGGGGGTTCTCTGGGAACCTGTGGCCAAGGGTCTCTGGTCACAGTGCCGAGGTGGGCCTGGCTTTTCCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS TCA 72 bp CTCGTCTCACTGCAACTTCCGCCTGCGGGGTTCAGATaGTCCGCCCATTTCAGCCTCCTGAGCAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LVSLQLPPAGFR*SAHFSLLSSWD
Trigger: GTCCCAGCTGCTCAGGAGGCTGAAATGGGCGGATCATCTGAACCCCGCAGGCGGAAGTTGCAGTGAGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 72 bp AGGGATGTAGTGCGGCTCGGAGCAGTGGGAGTTTGGTaGCGTGTGTGGAGGGGACATGACACACTAGGCCCA +
Preference number: 6 (lower is better)
Translates to: RDVVRLGAVGVW*RVWRGHDTLGP
Trigger: TGGGCCTAGTGTGTCATGTCCCCTCCACACACGCCACCAAACTCCCACTGCTCCGAGCCGCACTACATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CAA 90 bp AGTCTCCCTCTGTCACCTAGAGGGCTGGAGGGCAGTGGGGTGATCTaGGCCCACTGCAACCTCTGCCTCCCGGTTCTAGCAATTCTCCTG +
Preference number: 6 (lower is better)
Translates to: SLPLSPRGLEGSGVI*AHCNLCLPVLAILL
Trigger: CAGGAGAATTGCTAGAACCGGGAGGCAGAGGTTGCAGTGGGCCAAGATCACCCCACTGCCCTCCAGCCCTCTAGGTGACAGAGGGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS TCA 72 bp GGTCCCCTCTTTTACTGGGCTGAGTGTGCGTCCAGCTaGCTGTGGAAAGTCCCTGCTCCCAGGGTGGTCAGA +
Preference number: 6 (lower is better)
Translates to: GPLFYWAECASS*LWKVPAPRVVR
Trigger: TCTGACCACCCTGGGAGCAGGGACTTTCCACAGTCAGCTGGACGCACACTCAGCCCAGTAAAAGAGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354453.7
ENST00000395456.7
ENST00000454369.6
ENST00000562472.5
ENST00000563964.5
ENST00000566270.5
ENST00000630764.2
CDS TCA 72 bp AGGTGGGTAGGCAGGTGGCCAGGGGGCAACCGTGTCTaGGGACACAGAACCAAGTTGAAAGAAGGACTCCGG +
Preference number: 6 (lower is better)
Translates to: RWVGRWPGGNRV*GHRTKLKEGLR
Trigger: CCGGAGTCCTTCTTTCAACTTGGTTCTGTGTCCTCAGACACGGTTGCCCCCTGGCCACCTGCCTACCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS GCA 72 bp TCGGCCTCCACAGGCTCAGTCTTAGCCGCTCCAGGATaGAGTTCCTGGGACACATTCACATACTCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: SASTGSVLAAPG*SSWDTFTYSRL
Trigger: CAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGTGGAGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570232.2
CDS CCA 72 bp TCTCCCCGCTCTCCGGAACGTTCACGTAATCATCAATaGACTCCACTGTGGAAAAGCCAGGCCCACCTCGGC +
Preference number: 6 (lower is better)
Translates to: SPRSPERSRNHQ*TPLWKSQAHLG
Trigger: GCCGAGGTGGGCCTGGCTTTTCCACAGTGGAGTCCATTGATGATTACGTGAACGTTCCGGAGAGCGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 72 bp ACAGGCTCAGTCTTAGCCGCTCCAGGATGCAGTTCCTaGGACACATTCACATACTCCCGGCTGCCATCCAGA +
Preference number: 6 (lower is better)
Translates to: TGSVLAAPGCSS*DTFTYSRLPSR
Trigger: TCTGGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570232.2
CDS CAA 90 bp CCTGGCACCCAAGGTAGGGGACCCTCCTTGTACTCACGAGGCCGTTaGAACTGGATGCCCCTTGGATACAAACTATCTGAGGATGTGCTG +
Preference number: 6 (lower is better)
Translates to: PGTQGRGPSLYSRGR*NWMPLGYKLSEDVL
Trigger: CAGCACATCCTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCGTGAGTACAAGGAGGGTCCCCTACCTTGGGTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS TCA 72 bp CAGGGGGCAACCGTGTCTGAGGACACAGAACCAAGTTaGAAGAAGGACTCCGGACATCGTCAAGGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: QGATVSEDTEPS*KKDSGHRQGLK
Trigger: TTTGAGGCCTTGACGATGTCCGGAGTCCTTCTTTCAACTTGGTTCTGTGTCCTCAGACACGGTTGCCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS TCA 72 bp AAGGTAGGGGACCCTCCTTGTACTCACGAGGCCGTTTaGACTGGATGCCCCTTGGATACAAACTATCTGAGG +
Preference number: 6 (lower is better)
Translates to: KVGDPPCTHEAV*TGCPLDTNYLR
Trigger: CCTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCGTGAGTACAAGGAGGGTCCCCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS CCA 72 bp CCACTGCCTATGTCTCACTCCCATGTCAGCCCTTCATaGCGCCTGTCACCATCCATGTTATTTGGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: PLPMSHSHVSPS*RLSPSMLFGSF
Trigger: AAAGCTCCCAAATAACATGGATGGTGACAGGCGCCATGAAGGGCTGACATGGGAGTGAGACATAGGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS CCA 72 bp AGGGGACCCTCCTTGTACTCACGAGGCCGTTTGAACTaGATGCCCCTTGGATACAAACTATCTGAGGATGTG +
Preference number: 6 (lower is better)
Translates to: RGPSLYSRGRLN*MPLGYKLSEDV
Trigger: CACATCCTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCGTGAGTACAAGGAGGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS CAA 72 bp CAAGGTAGGGGACCCTCCTTGTACTCACGAGGCCGTTaGAACTGGATGCCCCTTGGATACAAACTATCTGAG +
Preference number: 6 (lower is better)
Translates to: QGRGPSLYSRGR*NWMPLGYKLSE
Trigger: CTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCGTGAGTACAAGGAGGGTCCCCTACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566270.5
CDS CCA 72 bp TCTGGAGCTCAGGAGAGAGCAAACTGGGAATCTGGATaGCAAACAAAGCCAGGGTATAGAAGTGATAGCCCA +
Preference number: 6 (lower is better)
Translates to: SGAQERANWESG*QTKPGYRSDSP
Trigger: TGGGCTATCACTTCTATACCCTGGCTTTGTTTGCCATCCAGATTCCCAGTTTGCTCTCTCCTGAGCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564447.5
CDS GCA 72 bp CCACCATGCCCAGCCAGCTATTTTATCAGGACAGTCTaGCTCCTTAACTGTTATATCCACAGCATTAGCCCA +
Preference number: 6 (lower is better)
Translates to: PPCPASYFIRTV*LLNCYIHSISP
Trigger: TGGGCTAATGCTGTGGATATAACAGTTAAGGAGGCAGACTGTCCTGATAAAATAGCTGGCTGGGCATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564447.5