RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LASP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000002834

Ensembl transcript IDs: ENST00000318008.11, ENST00000419929.1, ENST00000433206.6, ENST00000435347.7, ENST00000443937.7, ENST00000579123.1, ENST00000581485.1, ENST00000584106.1, ENST00000585841.5

Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGG +
Preference number: 1 (lower is better)
Translates to: PRGTASRHHLGRCAV*RLGLQAPCSHHRTG
Trigger: CCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CCA 90 bp GAAGACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTaGCCGGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGT +
Preference number: 1 (lower is better)
Translates to: EDRWGRCGFRWPPRS*PAASPCRRCAPPSR
Trigger: ACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR GCA 90 bp CTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: LPATTWGAALYGDWG*RLLVATIGLGHRLL
Trigger: CAGCAGCCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CCA 90 bp GTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGG +
Preference number: 1 (lower is better)
Translates to: VPLPATTWGAALYGD*GCRLLVATIGLGHR
Trigger: CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CCA 90 bp GCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTGCGGGTTCAGATaGCCTCCACGTAGTTGGCCGGCAGCATCCCCGTGTCGCCGGTGC +
Preference number: 1 (lower is better)
Translates to: AVECAEDRWGRCGFR*PPRSWPAASPCRRC
Trigger: GCACCGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR GCA 90 bp GGGGCAGGTGAGGCCCACAGGCCAACAGGTCTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAA +
Preference number: 1 (lower is better)
Translates to: GAGEAHRPTGLPFQP*LPQRGPCPFHPERK
Trigger: TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAGACCTGTTGGCCTGTGGGCCTCACCTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR CCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATaGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCA +
Preference number: 1 (lower is better)
Translates to: HAQDGCDAVECAEDR*GRCGFRWPPRSWPA
Trigger: TGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR TCA 90 bp GGGAGGAGCGGCCACCTAACCCAGATCCTGGGGGCTGAGGGAGGCTaGAGACCAAAAGGTCCTGAGGCACCCTTGCCCTACACTTCGGGA +
Preference number: 1 (lower is better)
Translates to: GRSGHLTQILGAEGG*RPKGPEAPLPYTSG
Trigger: TCCCGAAGTGTAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTTCAGCCTCCCTCAGCCCCCAGGATCTGGGTTAGGTGGCCGCTCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR TCA 90 bp GTGTTCCCAGGTAGCTGGGGTAAGGAAACCCCACCCAAAGCAGGGTaGGCAACCTGCCCATGGTACACCAGGGCTGGAACGCAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: VFPGSWGKETPPKAG*ATCPWYTRAGTQGP
Trigger: GGGGCCCTGCGTTCCAGCCCTGGTGTACCATGGGCAGGTTGCTCACCCTGCTTTGGGTGGGGTTTCCTTACCCCAGCTACCTGGGAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 90 bp GACCCAAGCTGTGCTTCCTCGGGAGCTCTTTGCCCGCTGCAGGTCTaGGTGGGCAGGAGGGCAAAATCACAGTGTGCGAAGGAACGCGCG +
Preference number: 1 (lower is better)
Translates to: DPSCASSGALCPLQV*VGRRAKSQCAKERA
Trigger: CGCGCGTTCCTTCGCACACTGTGATTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTCCCGAGGAAGCACAGCTTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR CCA 90 bp CAAGCTGTGCTTCCTCGGGAGCTCTTTGCCCGCTGCAGGTCTGCGTaGGCAGGAGGGCAAAATCACAGTGTGCGAAGGAACGCGCGGGGA +
Preference number: 1 (lower is better)
Translates to: QAVLPRELFARCRSA*AGGQNHSVRRNARG
Trigger: TCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTCCCGAGGAAGCACAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR TCA 90 bp TCCTGCTGGGCTTATTCACTTGCTCTAGGCCTGGCTCAGAGTAGGTaGACCAGACGGACGCTGCCAGGGTCCCCAGCCCAGCAGGGGACA +
Preference number: 1 (lower is better)
Translates to: SCWAYSLALGLAQSR*TRRTLPGSPAQQGT
Trigger: TGTCCCCTGCTGGGCTGGGGACCCTGGCAGCGTCCGTCTGGTTCACCTACTCTGAGCCAGGCCTAGAGCAAGTGAATAAGCCCAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR CCA 90 bp ACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTaGAATGTGCTGAAGACAGATGGGGGCGCTGCGGGTTCAGATGGC +
Preference number: 1 (lower is better)
Translates to: TLKNGRVTPRTDAMP*NVLKTDGGAAGSDG
Trigger: GCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR GCA 90 bp CCAACAGGTCTCCCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGG +
Preference number: 1 (lower is better)
Translates to: PTGLPFQPCLPQRGP*PFHPERKPRSRSRG
Trigger: CCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAGACCTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR CCA 90 bp ATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTGCCTaGAACCTTATACTTCAGACTAACTCTTGCGCCCACAGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: IQDRPIEEGGTGWAA*NLILQTNSCAHSAL
Trigger: CAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTATAAGGTTCCAGGCAGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 90 bp GTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTaGCAGAGGAGGGAGCCCGCAGAAGTGGCAGAAGAAGGCTTCAGT +
Preference number: 1 (lower is better)
Translates to: VPSREKTKKSIKGEA*QRREPAEVAEEGFS
Trigger: ACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR GCA 90 bp TGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTGTTTGTGTaGCCAGAGCATCAGACTCCAGCCAGCCATTATCTCAGGCGATTT +
Preference number: 1 (lower is better)
Translates to: CAHSALGSPNIPLFV*PEHQTPASHYLRRF
Trigger: AAATCGCCTGAGATAATGGCTGGCTGGAGTCTGATGCTCTGGGCACACAAACAAAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 90 bp GGGACTGGCTGGGCTGCCTGGAACCTTATACTTCAGACTAACTCTTaGGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTGTTTGTG +
Preference number: 1 (lower is better)
Translates to: GTGWAAWNLILQTNS*AHSALGSPNIPLFV
Trigger: CACAAACAAAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTATAAGGTTCCAGGCAGCCCAGCCAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 90 bp GATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTaGCACTACGCTGAAACCTTTGCCCTTGTTCTTCTCAAACTCCTC +
Preference number: 1 (lower is better)
Translates to: DLVLGLLDSLELGRV*HYAETFALVLLKLL
Trigger: GAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR CCA 90 bp AATGTAAGCCCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATaGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACT +
Preference number: 1 (lower is better)
Translates to: NVSPQRAERWLYIQR*TLHIQDRPIEEGGT
Trigger: AGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGGGCTTACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR TCA 90 bp GCTTTATATTCAGAGATGGACCCTACACATCCAGGACAGACCCATTaGGGAGGGAGGGACTGGCTGGGCTGCCTGGAACCTTATACTTCA +
Preference number: 1 (lower is better)
Translates to: ALYSEMDPTHPGQTH*GGRDWLGCLEPYTS
Trigger: TGAAGTATAAGGTTCCAGGCAGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTGAATATAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR TCA 90 bp ATCTCAGGCGATTTTATCTCTCTAAGTATCTGTTCTGCTCCTACGTaGGCTACTTTGAATTCCCAGGCACCCAGCCTGGAGGCGCTGAGC +
Preference number: 1 (lower is better)
Translates to: ISGDFISLSICSAPT*ATLNSQAPSLEALS
Trigger: GCTCAGCGCCTCCAGGCTGGGTGCCTGGGAATTCAAAGTAGCTCACGTAGGAGCAGAACAGATACTTAGAGAGATAAAATCGCCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR CCA 90 bp TGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCCACTACGCTGAAACCTTTGCCCTTG +
Preference number: 1 (lower is better)
Translates to: WYFMLLIWSWVFLIL*SSGVSATTLKPLPL
Trigger: CAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR GCA 90 bp GCCAGCCATTATCTCAGGCGATTTTATCTCTCTAAGTATCTGTTCTaGTCCTACGTGAGCTACTTTGAATTCCCAGGCACCCAGCCTGGA +
Preference number: 1 (lower is better)
Translates to: ASHYLRRFYLSKYLF*SYVSYFEFPGTQPG
Trigger: TCCAGGCTGGGTGCCTGGGAATTCAAAGTAGCTCACGTAGGAGCAGAACAGATACTTAGAGAGATAAAATCGCCTGAGATAATGGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 2 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGGCTGCTGCCGTCCTGTaGATCCCGACGCTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSAAAVL*IPTLWL
Trigger: GAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGC...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGGGTCCTGGGTCTTCTTaGTTCTCTGGAGCTCGGGCG +
Preference number: 2 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSGPGSS*FSGARA
Trigger: CGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACC...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGCACGCCCAGGACGGATaGGATGCCGTGGAATGTGCT +
Preference number: 2 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSHAQDG*DAVECA
Trigger: AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp GCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGTTGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: AASPCRRCAPPSRTSSRRCRGMC*RQMGAL
Trigger: CAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCA...ACGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCCCCGCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: WGRCGFRWPPRSWPAASPPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...CGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 2 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGATCCCCGTGTCGCCGGTaGGCTCCACCGTCCCGTACA +
Preference number: 2 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERSPCRR*APPSRT
Trigger: TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGA...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGCAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: ARYRFPPPPGALRCMETGQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...CCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGACTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERLPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp ACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: TDGGAAGSDGLHVVGRQHLPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...ATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGCCGCCGGTAGCTGCTaGCGTCCTGTGAATCCCGAC +
Preference number: 2 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRAAGSC*RPVNPD
Trigger: GTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCCCCGGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTA +
Preference number: 2 (lower is better)
Translates to: WGRCGFRWPPRSWPAASPALYGD*GCRLLV
Trigger: TACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGC...CGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp CACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGCTCCTTGTAGCTGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: HHLGRCAVWRLGLQAPCSCRGMC*RQMGAL
Trigger: CAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCA...GCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAGAGCTCTTTGCCCGCTaGAGGTCTGCGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERELFAR*RSAWAG
Trigger: TCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTC...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR CCA 90 bp CATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: HTPRGTASRHHLGRCAVWGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...CCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGGAGCTCTTTGCCCGCTaGAGGTCTGCGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRELFAR*RSAWAG
Trigger: TCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTC...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKGRCAV*RLGLQA
Trigger: AGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCC...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTTGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGACRGMC*RQMGAL
Trigger: CAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCA...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp CGTCGGCGGCGCTGTAGTCATACACCGCGCGGTACCGCTTCCCGCCACCACCTGTGTCTGCCACTACGCTaGAACCTTTGCCCTTGTTCT +
Preference number: 2 (lower is better)
Translates to: RRRRCSHTPRGTASRHHLCLPLR*NLCPCS
Trigger: AGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACA...CAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCGCCGCCGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR-3UTR TCA 90 bp CAGAGATGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCGGGCAGCCTGAGAGCTaGAGGATGTGGGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: QRWTLHIQDRPIEEGGTGGQPES*RMWGPS
Trigger: GGATGGCCCCCACATCCTTCAGCTCTCAGGCTGCCC...GCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTCTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: TEEWTGHAQDGCDAVECALPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAGTCCTGAGGCACCCTTaGCCTACACTTCGGGACCAT +
Preference number: 2 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERVLRHP*PTLRDH
Trigger: ATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTCACCACCTGGGGCGCTaGGCTGTATGGAGACTGGGG +
Preference number: 2 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAHHLGR*AVWRLG
Trigger: CCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGACAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GCTGAAGACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGCAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: AEDRWGRCGFRWPPRSWPQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...CGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTGGTAAACCGGGGCACTaGTCGGGATGTGGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAGKPGH*SGCGEA
Trigger: AGCCTCACCACATCCCGACCAGTGCCCCGGTTTACC...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp TGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTCTGGCTCAGAGTAGGTaGACCAGACGGACGCTGCCA +
Preference number: 2 (lower is better)
Translates to: WTLHIQDRPIEEGGTGWALAQSR*TRRTLP
Trigger: TGGCAGCGTCCGTCTGGTTCACCTACTCTGAGCCAG...AGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR CCA 90 bp CGTCGGCGGCGCTGTAGTCATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 2 (lower is better)
Translates to: RRRRCSHTPRGTASRHHLVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...CAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCGCCGCCGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTTGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: TEEWTGHAQDGCDAVECACRGMC*RQMGAL
Trigger: CAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCA...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGCGTGGGGAAAGGGGCTaGGGAAGAGAACTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRRGERG*GRELLV
Trigger: AACAAGGAGTTCTCTTCCGCAGCCCCTTTCCCCACG...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp CCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTACACATCCAGGAACCAGACGGACGCTaGCAGGGTCCCCAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: PQRAERWLYIQRWTLHIQEPDGR*QGPQPS
Trigger: GCTGGGCTGGGGACCCTGGCAGCGTCCGTCTGGTTC...CTGGATGTGTAGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR TCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGAGAAAGGCAAGAACCTaGCCCAAGCTGTGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRRKART*PKLCFL
Trigger: GAGGAAGCACAGCTTGGGTCAGGTTCTTGCCTTTCT...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR TCA 90 bp CCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTACACATCCAGTGGGGGCCATCCTCATaGAGCGAGGAGAGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: PQRAERWLYIQRWTLHIQWGPSS*SEESSA
Trigger: GGCGCTGCTCTCCTCGCTTCATGAGGATGGCCCCCA...CTGGATGTGTAGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAACTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: RPMPVPSREKTKKSIKGELPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGGCAAAATCACAGTGTaGGAAGGAACGCGCGGGGAG +
Preference number: 2 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEGKITV*EGTRGE
Trigger: CTCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCC...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGTGCCCGCTGCAGGTCTaGGTGGGCAGGAGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: PSREKTKKSIKGEACQRRCPLQV*VGRRAK
Trigger: TTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCA...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGAGCTCTTTGCCCGCTaGAGGTCTGCGTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PSREKTKKSIKGEACQRRELFAR*RSAWAG
Trigger: TCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR CCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAACGGATGCGATGCCGTaGAATGTGCTGAAGACAGAT +
Preference number: 2 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERTDAMP*NVLKTD
Trigger: ATCTGTCTTCAGCACATTCCACGGCATCGCATCCGT...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCACGGATGCGATGCCGTaGAATGTGCTGAAGACAGAT +
Preference number: 2 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRTDAMP*NVLKTD
Trigger: ATCTGTCTTCAGCACATTCCACGGCATCGCATCCGT...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTCCAGGAACCAAGAAGTaGATCCCACTCTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAPGTKK*IPLWGM
Trigger: CATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGG...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CAGAGATGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCGTGTTCCCAGGTAGCTaGGGTAAGGAAACCCCACCC +
Preference number: 2 (lower is better)
Translates to: QRWTLHIQDRPIEEGGTGVFPGS*GKETPP
Trigger: GGGTGGGGTTTCCTTACCCCAGCTACCTGGGAACAC...GCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR TCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATTGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: SPREAHARSIQRENQEVDCRGMC*RQMGAL
Trigger: CAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCA...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGAATGTAGGGAGCCCCTaGCCTGGGGTCCTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: RSIQRENQEVDQGGSLPENVGSP*PGVLAV
Trigger: GACTGCCAGGACCCCAGGTCAGGGGCTCCCTACATT...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
3UTR-3UTR TCA 90 bp CAGAGATGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTTGGAAAAAGTGCTCTaGAGGCAGCCAGCGGAGTCG +
Preference number: 2 (lower is better)
Translates to: QRWTLHIQDRPIEEGGTGLEKVL*RQPAES
Trigger: CGACTCCGCTGGCTGCCTTCAGAGCACTTTTTCCAA...GCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGACAGATGGGGGCGCTaGGGGTTCAGATGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: RPMPVPSREKTKKSIKGEDRWGR*GFRWPP
Trigger: TGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTC...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTGAGAGCAGCGCCCAGTaGTGGAAGGCCCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLESSAQ*WKAPCR
Trigger: TCTGCATGGGGCCTTCCAGCACTGGGCGCTGCTCTC...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR CCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: EEWTGHAQDGCDAVECAERDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 2 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp AAGACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 2 (lower is better)
Translates to: KTDGGAAGSDGLHVVGRQVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...CTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEVFLIL*SSGVSA
Trigger: GGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGAC...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGTTTATGTTACTGATCTaGTCCTGGGTCTTCTTGATT +
Preference number: 2 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSFMLLI*SWVFLI
Trigger: AATCAAGAAGACCCAGGACCAGATCAGTAACATAAA...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp AAAAAGTGCTCTGAAGGCAGCCAGCGGAGTCGAGTGATGCAAAGCATCAGGGTGATGGTACACCAGGGCTaGAACGCAGGGCCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: KKCSEGSQRSRVMQSIRVMVHQG*NAGPQS
Trigger: GGACTGGGGCCCTGCGTTCCAGCCCTGGTGTACCAT...CACCCTGATGCTTTGCATCACTCGACTCCGCTGGCTGCCTTCAGAGCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR TCA 90 bp TTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTGTCCGGGACTTCAGCTCTaGGGGCTCAGGAAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: FRLTLAPTVPWAVLTSLCPGLQL*GLRKPD
Trigger: ATCAGGCTTCCTGAGCCCTCAGAGCTGAAGTCCCGG...ACAAAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR GCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGGCAAAATCACAGTGTaGGAAGGAACGCGCGGGGAG +
Preference number: 2 (lower is better)
Translates to: PSREKTKKSIKGEACQRRGKITV*EGTRGE
Trigger: CTCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGTATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACC +
Preference number: 2 (lower is better)
Translates to: PSREKTKKSIKGEACQRRYGDWG*RLLVAT
Trigger: GGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAACCAGGAACCAAGAAGTaGATCCCACTCTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEPGTKK*IPLWGM
Trigger: CATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGG...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CGTCGGCGGCGCTGTAGTCATACACCGCGCGGTACCGCTTCCCGCCACCACCTGTTTATGTTACTGATCTaGTCCTGGGTCTTCTTGATT +
Preference number: 2 (lower is better)
Translates to: RRRRCSHTPRGTASRHHLFMLLI*SWVFLI
Trigger: AATCAAGAAGACCCAGGACCAGATCAGTAACATAAA...CAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCGCCGCCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGGTAAACCGGGGCACTaGTCGGGATGTGGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEGKPGH*SGCGEA
Trigger: AGCCTCACCACATCCCGACCAGTGCCCCGGTTTACC...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: PSREKTKKSIKGEACQRRRDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: AHARSIQRENQEVDQGGSGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAACAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PREAHARSIQRENQEVDQQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAACAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: RPMPVPSREKTKKSIKGEQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp GAATGTAAGCCCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTAGCAGCGCCCAGTGCTaGAAGGCCCCATGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: ECKPPEGREVALYSEMDPSSAQC*KAPCRK
Trigger: CTTTCTGCATGGGGCCTTCCAGCACTGGGCGCTGCT...AGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGGGCTTACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp CGGAGTCGAGTGATGCAAAGCATCAGGGTGATGCGCTTTACACGACATGGCTGGTGCTGGAAGGCCCCATaGAGAAAGTTGCCTTGTGTG +
Preference number: 2 (lower is better)
Translates to: RSRVMQSIRVMRFTRHGWCWKAP*RKLPCV
Trigger: CACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCA...CCAGCCATGTCGTGTAAAGCGCATCACCCTGATGCTTTGCATCACTCGACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAATTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKLLIWS*VFLILW
Trigger: CCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAA...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CAA 90 bp GGCTTTATATTCAGAGATGGACCCTACACATCCAGGACAGACCCATaGAGGAGGGAGGGACTGGCTGGGCTGCCTGGAACCTTATACTTC +
Preference number: 2 (lower is better)
Translates to: GFIFRDGPYTSRTDP*RREGLAGLPGTLYF
Trigger: GAAGTATAAGGTTCCAGGCAGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTGAATATAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR CCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAACCAGGAACCAAGAAGTaGATCCCACTCTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: RPMPVPSREKTKKSIKGEPGTKK*IPLWGM
Trigger: CATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGG...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
3UTR-3UTR CCA 90 bp TTTGTGTGCCCAGAGCATCAGACTCCAGCCAGCCATTATCTCAGGCGATTTTATGCGCTTTACACGACATaGCTGGGGAGGCCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: FVCPEHQTPASHYLRRFYALYTT*LGRPLR
Trigger: TCTGAGGGGCCTCCCCAGCCATGTCGTGTAAAGCGC...ATAAAATCGCCTGAGATAATGGCTGGCTGGAGTCTGATGCTCTGGGCACACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATTGCCCGCTGCAGGTCTaGGTGGGCAGGAGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDCPLQV*VGRRAK
Trigger: TTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCA...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGACACGCCCAGGACGGATaGGATGCCGTGGAATGTGCT +
Preference number: 2 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRHAQDG*DAVECA
Trigger: AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTATCTCACCCCATTCCTaGTGGGCTTATTCACTTGCT +
Preference number: 2 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLISPHS*WAYSLA
Trigger: AGCAAGTGAATAAGCCCAGCAGGAATGGGGTGAGAT...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR GCA 90 bp CAGAGATGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTCTAAGTATCTGTTCTaGTCCTACGTGAGCTACTTT +
Preference number: 2 (lower is better)
Translates to: QRWTLHIQDRPIEEGGTGSKYLF*SYVSYF
Trigger: AAAGTAGCTCACGTAGGAGCAGAACAGATACTTAGA...GCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR-3UTR CCA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 2 (lower is better)
Translates to: PREAHARSIQRENQEVDQVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR CAA 90 bp AACTCCTCATGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTaGATTCTCTGGAGCTCGGGCGTGTCTGCCACTACGCTGAAACCT +
Preference number: 2 (lower is better)
Translates to: NSSWYFMLLIWSWVF*ILWSSGVSATTLKP
Trigger: AGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCATGAGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGAACCTGCAGACATACATaGTCCTGCCTCCGCACACCA +
Preference number: 2 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRTCRHT*SCLRTP
Trigger: TGGTGTGCGGAGGCAGGAGCATGTATGTCTGCAGGT...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR GCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATACCTGCAGACATACATaGTCCTGCCTCCGCACACCA +
Preference number: 2 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDTCRHT*SCLRTP
Trigger: TGGTGTGCGGAGGCAGGAGCATGTATGTCTGCAGGT...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR CCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGAAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRRDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR-3UTR CCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGAGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR GCA 72 bp CCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTaGGCTGTATGGAGACTGGGGCTGCAGGCTCCTTGT +
Preference number: 3 (lower is better)
Translates to: PRGTASRHHLGR*AVWRLGLQAPC
Trigger: ACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CCA 72 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTaGCCGGCAGCATCCCCGTGTCGCCGGTGCGCTCCA +
Preference number: 3 (lower is better)
Translates to: WGRCGFRWPPRS*PAASPCRRCAP
Trigger: TGGAGCGCACCGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CCA 72 bp CCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTG +
Preference number: 3 (lower is better)
Translates to: PATTWGAALYGD*GCRLLVATIGL
Trigger: CAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CCA 72 bp ACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCAT +
Preference number: 3 (lower is better)
Translates to: TASRHHLGRCAV*RLGLQAPCSHH
Trigger: ATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR TCA 72 bp TCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTGCGGGTTCAGATGGCC +
Preference number: 3 (lower is better)
Translates to: SRPGRMRCRGMC*RQMGALRVQMA
Trigger: GGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CCA 72 bp AATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTaGAATGTGCTGAAGACAGATGGGGGCGCTGCGGGT +
Preference number: 3 (lower is better)
Translates to: NGRVTPRTDAMP*NVLKTDGGAAG
Trigger: ACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR TCA 72 bp GGCCACCTAACCCAGATCCTGGGGGCTGAGGGAGGCTaGAGACCAAAAGGTCCTGAGGCACCCTTGCCCTAC +
Preference number: 3 (lower is better)
Translates to: GHLTQILGAEGG*RPKGPEAPLPY
Trigger: GTAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTTCAGCCTCCCTCAGCCCCCAGGATCTGGGTTAGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR TCA 72 bp CTCTTCCTCAGTCCTGGAAGCCCTGGGCCAGCACGGTaGCTCTTAGTGGGAGGCCCTTTGGGAAGCGGGCAT +
Preference number: 3 (lower is better)
Translates to: LFLSPGSPGPAR*LLVGGPLGSGH
Trigger: ATGCCCGCTTCCCAAAGGGCCTCCCACTAAGAGTCACCGTGCTGGCCCAGGGCTTCCAGGACTGAGGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR GCA 72 bp GATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTaGGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCA +
Preference number: 3 (lower is better)
Translates to: DAVECAEDRWGR*GFRWPPRSWPA
Trigger: TGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CAA 90 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCCCCGCTGAAACCTTTGCCCTaGTTCTTCTCAAACTCCTCC +
Preference number: 3 (lower is better)
Translates to: WGRCGFRWPPRSWPAASPLKPLP*FFSNSS
Trigger: GGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAG...CGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR-3UTR CAA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGACTACGCTGAAACCTTaGCCCTTGTTCTTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSTTLKP*PLFFSN
Trigger: GTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGT...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR TCA 72 bp GCTTATTCACTTGCTCTAGGCCTGGCTCAGAGTAGGTaGACCAGACGGACGCTGCCAGGGTCCCCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: AYSLALGLAQSR*TRRTLPGSPAQ
Trigger: CTGGGCTGGGGACCCTGGCAGCGTCCGTCTGGTTCACCTACTCTGAGCCAGGCCTAGAGCAAGTGAATAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR TCA 72 bp TTGGTAAGGGTGGCTCAGCGGCACCCATGGGTGGAGTaGGTGGCAGGACTTACAGAGCCGGGACTTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LVRVAQRHPWVE*VAGLTEPGLQL
Trigger: GAGCTGAAGTCCCGGCTCTGTAAGTCCTGCCACTCACTCCACCCATGGGTGCCGCTGAGCCACCCTTACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 72 bp TGTGCTTCCTCGGGAGCTCTTTGCCCGCTGCAGGTCTaGGTGGGCAGGAGGGCAAAATCACAGTGTGCGAAG +
Preference number: 3 (lower is better)
Translates to: CASSGALCPLQV*VGRRAKSQCAK
Trigger: CTTCGCACACTGTGATTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTCCCGAGGAAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR CCA 72 bp GACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATaGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGT +
Preference number: 3 (lower is better)
Translates to: DGCDAVECAEDR*GRCGFRWPPRS
Trigger: ACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR-3UTR CAA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGTCCTGAGGCACCCTaGCCCTACACTTCGGGACCA +
Preference number: 3 (lower is better)
Translates to: PREAHARSIQRENQEVDQGPEAP*PYTSGP
Trigger: TGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGACC...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
3UTR TCA 72 bp AGAGCCGGGACTTCAGCTCTGAGGGCTCAGGAAGCCTaGTCTCACCCCATTCCTGCTGGGCTTATTCACTTG +
Preference number: 3 (lower is better)
Translates to: RAGTSALRAQEA*SHPIPAGLIHL
Trigger: CAAGTGAATAAGCCCAGCAGGAATGGGGTGAGATCAGGCTTCCTGAGCCCTCAGAGCTGAAGTCCCGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR CCA 72 bp AGACCCATTGAGGAGGGAGGGACTGGCTGGGCTGCCTaGAACCTTATACTTCAGACTAACTCTTGCGCCCAC +
Preference number: 3 (lower is better)
Translates to: RPIEEGGTGWAA*NLILQTNSCAH
Trigger: GTGGGCGCAAGAGTTAGTCTGAAGTATAAGGTTCCAGGCAGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 72 bp AGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTaGCAGAGGAGGGAGCCCGCAGAAGTGGCAGAAGAA +
Preference number: 3 (lower is better)
Translates to: REKTKKSIKGEA*QRREPAEVAEE
Trigger: TTCTTCTGCCACTTCTGCGGGCTCCCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
3UTR GCA 72 bp TGGGCTGCCTGGAACCTTATACTTCAGACTAACTCTTaGGCCCACAGTGCCCTGGGCAGTCCTAACATCCCT +
Preference number: 3 (lower is better)
Translates to: WAAWNLILQTNS*AHSALGSPNIP
Trigger: AGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTATAAGGTTCCAGGCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 72 bp CTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTaGCACTACGCTGAAACCTTTGCCCTTGTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: LGLLDSLELGRV*HYAETFALVLL
Trigger: GAGAAGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR CCA 72 bp CCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATaGACCCTACACATCCAGGACAGACCCATTGAGGAG +
Preference number: 3 (lower is better)
Translates to: PQRAERWLYIQR*TLHIQDRPIEE
Trigger: CTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR GCA 72 bp GTCTTAATCCAGCTGCTTTCTATCCATCCCTCACCCTaGTGTCTTTCTCTTCACAGCGTGTCACCGCTGACC +
Preference number: 3 (lower is better)
Translates to: VLIQLLSIHPSP*CLSLHSVSPLT
Trigger: GGTCAGCGGTGACACGCTGTGAAGAGAAAGACAGCAGGGTGAGGGATGGATAGAAAGCAGCTGGATTAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR CCA 72 bp ATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCCACTACGCTGAAACCT +
Preference number: 3 (lower is better)
Translates to: MLLIWSWVFLIL*SSGVSATTLKP
Trigger: AGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443937.7
3UTR CCA 72 bp CCTGACTGGAATGTAAGCCCCCAGAGGGCAGAGAGGTaGCTTTATATTCAGAGATGGACCCTACACATCCAG +
Preference number: 3 (lower is better)
Translates to: PDWNVSPQRAER*LYIQRWTLHIQ
Trigger: CTGGATGTGTAGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGGGCTTACATTCCAGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR TCA 72 bp GATTTTATCTCTCTAAGTATCTGTTCTGCTCCTACGTaGGCTACTTTGAATTCCCAGGCACCCAGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: DFISLSICSAPT*ATLNSQAPSLE
Trigger: CTCCAGGCTGGGTGCCTGGGAATTCAAAGTAGCTCACGTAGGAGCAGAACAGATACTTAGAGAGATAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR CCA 72 bp AACTCCTCATGGTATTTTATGTTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCT +
Preference number: 3 (lower is better)
Translates to: NSSWYFMLLIWS*VFLILWSSGVS
Trigger: AGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCATGAGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR GCA 72 bp TATCTCAGGCGATTTTATCTCTCTAAGTATCTGTTCTaGTCCTACGTGAGCTACTTTGAATTCCCAGGCACC +
Preference number: 3 (lower is better)
Translates to: YLRRFYLSKYLF*SYVSYFEFPGT
Trigger: GGTGCCTGGGAATTCAAAGTAGCTCACGTAGGAGCAGAACAGATACTTAGAGAGATAAAATCGCCTGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR TCA 72 bp CACCCTGCTGTCTTTCTCTTCACAGCGTGTCACCGCTaGCCTTATGTTATACACCTATTTTCTTATTGTTTT +
Preference number: 3 (lower is better)
Translates to: HPAVFLFTACHR*PYVIHLFSYCF
Trigger: AAAACAATAAGAAAATAGGTGTATAACATAAGGTCAGCGGTGACACGCTGTGAAGAGAAAGACAGCAGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp CATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGTGGGGCGGGGACGCCTaGGCTCACGCGCGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: HTPRGTASRHHLGRCAVWWGGDA*AHARPV
Trigger: AACAGGACGCGCGTGAGCTCAGGCGTCCCCGCCCCA...CCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp ACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGGAGGCGGCCGCGGCTaGAACTACACAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TASRHHLGRCAVWRLGLQGGGRG*NYTGSS
Trigger: GCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCC...CTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGCTCGGAGGCGGCCGCGGCTaGAACTACACAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPATTWGAALYGDWGCRLGGGRG*NYTGSS
Trigger: GCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCC...GAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCCCCGGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: WGRCGFRWPPRSWPAASPGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...CGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGCTTCCCGCCACCACCTaGGGCGCTGCGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSLPATT*GAALYG
Trigger: TCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CGTCGGCGGCGCTGTAGTCATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGCCGCCGGTAGCTGCTaGCGTCCTGTGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: RRRRCSHTPRGTASRHHLAAGSC*RPVNPD
Trigger: GTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGC...CAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCGCCGCCGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCCCCGGCCGCCGGTAGCTGCTaGCGTCCTGTGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: WGRCGFRWPPRSWPAASPAAGSC*RPVNPD
Trigger: GTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGC...CGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp ACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGCACCACCTGGGGCGCTaGGCTGTATGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: TASRHHLGRCAVWRLGLQHHLGR*AVWRLG
Trigger: CCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG...CTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTTCCCGCCACCACCTaGGGCGCTGCGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: TPRGTASRHHLGRCAVWRLPATT*GAALYG
Trigger: TCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG...TCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
3UTR CAA 72 bp GGCACCCAGCCTGGAGGCGCTGAGCCTGCCAGGAGCTaGGTAAGGGTGGCTCAGCGGCACCCATGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GTQPGGAEPARS*VRVAQRHPWVE
Trigger: CTCCACCCATGGGTGCCGCTGAGCCACCCTTACCAAGCTCCTGGCAGGCTCAGCGCCTCCAGGCTGGGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp ACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATTGGGGCGGGGACGCCTaGGCTCACGCGCGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TDGGAAGSDGLHVVGRQHWGGDA*AHARPV
Trigger: AACAGGACGCGCGTGAGCTCAGGCGTCCCCGCCCCA...ATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CGTAGTTGGCCGGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACAAATGTAGGGAGCCCCTaGCCTGGGGTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: RSWPAASPCRRCAPPSRTNVGSP*PGVLAV
Trigger: GACTGCCAGGACCCCAGGTCAGGGGCTCCCTACATT...TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCCGGCCAACTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585841.5
CDS-3UTR GCA 90 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCCCCGGACAGATGGGGGCGCTaGGGGTTCAGATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WGRCGFRWPPRSWPAASPDRWGR*GFRWPP
Trigger: TGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTC...CGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CGTAGTTGGCCGGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACAGACAGATGGGGGCGCTaGGGGTTCAGATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RSWPAASPCRRCAPPSRTDRWGR*GFRWPP
Trigger: TGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTC...TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCCGGCCAACTACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGGTAAACCGGGGCACTaGTCGGGATGTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARYRFPPPPGALRCMETGGKPGH*SGCGEA
Trigger: AGCCTCACCACATCCCGACCAGTGCCCCGGTTTACC...CCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGTAGTTGGCCGGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACACGCTGCGGGTTCAGATaGCCTCCACGTAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RSWPAASPCRRCAPPSRTRCGFR*PPRSWP
Trigger: CGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCG...TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCCGGCCAACTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGACGGCGGCTGGAGCTaGGGAACTGGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRDGGWS*GTGLRL
Trigger: GAGGCGGAGGCCAGTTCCCCAGCTCCAGCCGCCGTC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433206.6
ENST00000585841.5
CDS-3UTR TCA 90 bp ACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGGTCCTGGGTCTTCTTaGTTCTCTGGAGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: TASRHHLGRCAVWRLGLQGPGSS*FSGARA
Trigger: CGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACC...CTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CGCTGTAGTCATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RCSHTPRGTASRHHLGRCPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...GCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATCCCCGGGTAAACCGGGGCACTaGTCGGGATGTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: WGRCGFRWPPRSWPAASPGKPGH*SGCGEA
Trigger: AGCCTCACCACATCCCGACCAGTGCCCCGGTTTACC...CGGGGATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCCAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AVPLPATTWGAALYGDWGQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...GCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGGACGGCGGCTGGAGCTaGGGAACTGGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRDGGWS*GTGLRL
Trigger: GAGGCGGAGGCCAGTTCCCCAGCTCCAGCCGCCGTC...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433206.6
CDS-3UTR CCA 90 bp GCTGAAGACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGAGCAGCGACGGCGGCTaGAGCTGGGGAACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEDRWGRCGFRWPPRSWPSSDGG*SWGTGL
Trigger: GAGGCCAGTTCCCCAGCTCCAGCCGCCGTCGCTGCT...CGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAGCTGCTGCCGTCCTGTaGATCCCGACGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERAAAVL*IPTLWL
Trigger: GAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGC...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGACTGGTCGGGATGTGGTaGGGCTGCTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERLVGMW*GCCCSR
Trigger: CCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAG...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGGGAGGCGGCCGCGGCTaGAACTACACAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRGGGRG*NYTGSS
Trigger: GCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCC...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318008.11
ENST00000433206.6
CDS-3UTR GCA 90 bp GCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCGAGCTCGGGCGTGTCTaGCACTACGCTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: AVPLPATTWGAALYGDWGELGRV*HYAETF
Trigger: AAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTC...GCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGCGCAGTTGGGGTTCATaGTTCCGAGAAAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARYRFPPPPGALRCMETGRSWGS*FREKLG
Trigger: CCCCAGCTTTTCTCGGAACCATGAACCCCAACTGCG...CCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GGCAGCATCCCCGTGTCGCCGGTGCGCTCCACCGTCCCGTACATCCAGCCGTCGGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSIPVSPVRSTVPYIQPSVFLIL*SSGVSA
Trigger: GGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGAC...CGACGGCTGGATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: TASRHHLGRCAVWRLGLQALYGD*GCRLLV
Trigger: TACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGC...CTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCATGCCCTCGCCCCCGCTAGGGCCCATGCGGCTCTTCTCAAACTCCTCATGGGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SMPSPPLGPMRLFSNSSWGRCAV*RLGLQA
Trigger: AGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCC...CCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGACTTCCCGCCACCACCTaGGGCGCTGCGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERLPATT*GAALYG
Trigger: TCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGTGGGGCGGGGACGCCTaGGCTCACGCGCGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVWGGDA*AHARPV
Trigger: AACAGGACGCGCGTGAGCTCAGGCGTCCCCGCCCCA...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTGCTGCTGCCGTCCTGTaGATCCCGACGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAAAAVL*IPTLWL
Trigger: GAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGC...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTCACCACCTGGGGCGCTaGGCTGTATGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAHHLGR*AVWRLG
Trigger: CCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TATGGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGGCACCACCTGGGGCGCTaGGCTGTATGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: YGDWGCRLLVATIGLGHRHHLGR*AVWRLG
Trigger: CCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG...CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACTCCCCGTGTCGCCGGTaGGCTCCACCGTCCCGTACA +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDSPCRR*APPSRT
Trigger: TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGA...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAATCCCCGTGTCGCCGGTaGGCTCCACCGTCCCGTACA +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKSPCRR*APPSRT
Trigger: TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGA...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAGACAGATGGGGGCGCTaGGGGTTCAGATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERDRWGR*GFRWPP
Trigger: TGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTC...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGCTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRLPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGAGCTCTTTGCCCGCTaGAGGTCTGCGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRELFAR*RSAWAG
Trigger: TCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp CTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGCTCAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPATTWGAALYGDWGCRLRDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...GAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAGGTCCTGGGTCTTCTTaGTTCTCTGGAGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERGPGSS*FSGARA
Trigger: CGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACC...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACCTGGTCGGGATGTGGTaGGGCTGCTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDLVGMW*GCCCSR
Trigger: CCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAG...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TCCATGCCCTCGCCCCCGCTAGGGCCCATGCGGCTCTTCTCAAACTCCTCATGGCGATCTGCTGCACGTTaGCGATGGTGTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SMPSPPLGPMRLFSNSSWRSAAR*RWCPRP
Trigger: AGGACGGGGACACCATCGTCAACGTGCAGCAGATCG...CCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp AAGACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGTGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KTDGGAAGSDGLHVVGRQCRGMC*RQMGAL
Trigger: CAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCA...CTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTAATGTAGGGAGCCCCTaGCCTGGGGTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGANVGSP*PGVLAV
Trigger: GACTGCCAGGACCCCAGGTCAGGGGCTCCCTACATT...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGGAGGCGGCCGCGGCTaGAACTACACAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVGGGRG*NYTGSS
Trigger: GCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCC...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTGGGATACACGATCTTaGCGCACCGGGCGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRWDTRS*RTGRSW
Trigger: CCAACTGCGCCCGGTGCGGCAAGATCGTGTATCCCA...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTGACAGATGGGGGCGCTaGGGGTTCAGATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGADRWGR*GFRWPP
Trigger: TGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTC...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TCCATGCCCTCGCCCCCGCTAGGGCCCATGCGGCTCTTCTCAAACTCCTCATGGCACGCCCAGGACGGATaGGATGCCGTGGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: SMPSPPLGPMRLFSNSSWHAQDG*DAVECA
Trigger: AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG...CCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GATGCAAAGCATCAGGGTGATGCGCTTTACACGACATGGCTGGGGAGGCCCCTCGAACCAGACGGACGCTaGCAGGGTCCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DAKHQGDALYTTWLGRPLEPDGR*QGPQPS
Trigger: GCTGGGCTGGGGACCCTGGCAGCGTCCGTCTGGTTC...GAGGGGCCTCCCCAGCCATGTCGTGTAAAGCGCATCACCCTGATGCTTTGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp CTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGCTCAGTTCACCTTCTCCGTaGGATACACGATCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LPATTWGAALYGDWGCRLSSPSP*DTRSCR
Trigger: GCGGCAAGATCGTGTATCCCACGGAGAAGGTGAACT...GAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDGRCAV*RLGLQA
Trigger: AGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCC...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TATGGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGGTGGCCTCCACGTAGTTaGCCGGCAGCATCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: YGDWGCRLLVATIGLGHRWPPRS*PAASPC
Trigger: ACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA...CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TATGGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGGCGCTGCGGGTTCAGATaGCCTCCACGTAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: YGDWGCRLLVATIGLGHRRCGFR*PPRSWP
Trigger: CGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCG...CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGACGGATGCGATGCCGTaGAATGTGCTGAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: ARYRFPPPPGALRCMETGTDAMP*NVLKTD
Trigger: ATCTGTCTTCAGCACATTCCACGGCATCGCATCCGT...CCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAAGCAGCGACGGCGGCTaGAGCTGGGGAACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAESSDGG*SWGTGL
Trigger: GAGGCCAGTTCCCCAGCTCCAGCCGCCGTCGCTGCT...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433206.6
ENST00000585841.5
CDS-3UTR CCA 90 bp AGAGCAGCGCCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCACCCCGCCACCACCTaGGGCGCTGCGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: RAAPSAGRPHAESCLVCSHPATT*GAALYG
Trigger: TCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGGTG...GGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGGCGCTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGCTCACTCTGTTGCTTaGGGCGAAGGTTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRAHSVA*GEGFPG
Trigger: CCCCGGAAAACCTTCGCCTCAAGCAACAGAGTGAGC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR TCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCTGGTCGGGATGTGGTaGGGCTGCTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKLVGMW*GCCCSR
Trigger: CCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGGCCGCCGGTAGCTGCTaGCGTCCTGTGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKAAGSC*RPVNPD
Trigger: GTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGC...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGCCGCCGGTAGCTGCTaGCGTCCTGTGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAAAGSC*RPVNPD
Trigger: GTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGC...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRYGDWG*RLLVAT
Trigger: GGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCCCGTCGTCGATCTGCTaGACGTTGACGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRPSSIC*TLTMVS
Trigger: GGACACCATCGTCAACGTGCAGCAGATCGACGACGG...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAACTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAELPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTGCCACTACGCTGCTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WSWVFLILWSSGVSATTLLPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...CAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR GCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAATGCCCGCTGCAGGTCTaGGTGGGCAGGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKCPLQV*VGRRAK
Trigger: TTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCA...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACGCTGCGGGTTCAGATaGCCTCCACGTAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKRCGFR*PPRSWP
Trigger: CGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCG...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCCAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TATGGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGGCAGTCCTGGAAGCCCTaGGCCAGCACGGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: YGDWGCRLLVATIGLGHRQSWKP*ASTVTL
Trigger: AAGAGTCACCGTGCTGGCCCAGGGCTTCCAGGACTG...CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR TCA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAATGGGGCGGGGACGCCTaGGCTCACGCGCGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PREAHARSIQRENQEVDQWGGDA*AHARPV
Trigger: AACAGGACGCGCGTGAGCTCAGGCGTCCCCGCCCCA...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTGCTCACTCTGTTGCTTaGGGCGAAGGTTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAAHSVA*GEGFPG
Trigger: CCCCGGAAAACCTTCGCCTCAAGCAACAGAGTGAGC...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR TCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAAATGTAGGGAGCCCCTaGCCTGGGGTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAENVGSP*PGVLAV
Trigger: GACTGCCAGGACCCCAGGTCAGGGGCTCCCTACATT...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAGACCAAAAGGTCCTaGGGCACCCTTGCCCTACAC +
Preference number: 4 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERKTKRS*GTLALH
Trigger: GTGTAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTT...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp TGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTCCGGGACTTCAGCTCTaGGGGCTCAGGAAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: WTLHIQDRPIEEGGTGWAPGLQL*GLRKPD
Trigger: ATCAGGCTTCCTGAGCCCTCAGAGCTGAAGTCCCGG...AGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp CACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGGCTCCTTGTAGCTGGGGTAGTGTGCGTTaGAGTAGGGCTTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: HHLGRCAVWRLGLQAPCSWGSVR*SRASSR
Trigger: ACGAGAAGAAGCCCTACTGCAACGCACACTACCCCA...GCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR GCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTCAGCCGTCGTCGATCTaGTGCACGTTGACGATGGTG +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAQPSSI*CTLTMV
Trigger: CACCATCGTCAACGTGCAGCAGATCGACGACGGCTG...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTTGCCCGCTGCAGGTCTaGGTGGGCAGGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECACPLQV*VGRRAK
Trigger: TTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCA...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAGCTCTTTGCCCGCTaGAGGTCTGCGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVELFAR*RSAWAG
Trigger: TCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCTC...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AGTGAGTGGCAGGACTTACAGAGCCGGGACTTCAGCTCTGAGGGCTCAGGAAGCGAGAGCAGCGCCCAGTaGTGGAAGGCCCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SEWQDLQSRDFSSEGSGSESSAQ*WKAPCR
Trigger: TCTGCATGGGGCCTTCCAGCACTGGGCGCTGCTCTC...GCTTCCTGAGCCCTCAGAGCTGAAGTCCCGGCTCTGTAAGTCCTGCCACTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAATGGCCTCCACGTAGTTaGCCGGCAGCATCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEWPPRS*PAASPC
Trigger: ACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTTGTGCTGAAGACAGATaGGGGCGCTGCGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGACAEDR*GRCGFR
Trigger: TCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACA...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGCTGTAGTCATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: RCSHTPRGTASRHHLGRCVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...GCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGAGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: TPRGTASRHHLGRCAVWRVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...TCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTCAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTAGCAGCGCCCAGTGCTaGAAGGCCCCATGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: WTLHIQDRPIEEGGTGWASSAQC*KAPCRK
Trigger: CTTTCTGCATGGGGCCTTCCAGCACTGGGCGCTGCT...AGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGGTCCTGGGTCTTCTTaGTTCTCTGGAGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEGPGSS*FSGARA
Trigger: CGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACC...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCTGGTCGGGATGTGGTaGGGCTGCTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDLVGMW*GCCCSR
Trigger: CCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAG...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCGATCTGCTGCACGTTaGCGATGGTGTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKRSAAR*RWCPRP
Trigger: AGGACGGGGACACCATCGTCAACGTGCAGCAGATCG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGCGATCTGCTGCACGTTaGCGATGGTGTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVRSAAR*RWCPRP
Trigger: AGGACGGGGACACCATCGTCAACGTGCAGCAGATCG...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAGAAAGGCAAGAACCTaGCCCAAGCTGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERRKART*PKLCFL
Trigger: GAGGAAGCACAGCTTGGGTCAGGTTCTTGCCTTTCT...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp CCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCAGGTAGCTACTCCTGACCTCAAGTaGCCTGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSAGRPHAESCLVCSQVATPDLK*PARLGL
Trigger: GAGGCCAAGGCGGGCAGGTCACTTGAGGTCAGGAGT...AGCTACCTGGGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp TGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTTATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: WTLHIQDRPIEEGGTGWAYGDWG*RLLVAT
Trigger: GGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA...AGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACCCGTCGTCGATCTGCTaGACGTTGACGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDPSSIC*TLTMVS
Trigger: GGACACCATCGTCAACGTGCAGCAGATCGACGACGG...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCACGCCCAGGACGGATaGGATGCCGTGGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKHAQDG*DAVECA
Trigger: AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAACACGCCCAGGACGGATaGGATGCCGTGGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEHAQDG*DAVECA
Trigger: AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGACCTGCAGACATACATaGTCCTGCCTCCGCACACCA +
Preference number: 4 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRTCRHT*SCLRTP
Trigger: TGGTGTGCGGAGGCAGGAGCATGTATGTCTGCAGGT...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AAAAAGTGCTCTGAAGGCAGCCAGCGGAGTCGAGTGATGCAAAGCATCAGGGTGTCCCGAAGGACCCCCTaGCTCTGGCCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KKCSEGSQRSRVMQSIRVSRRTP*LWPLPS
Trigger: GGAGGGGAGAGGCCAGAGGCAGGGGGTCCTTCGGGA...CACCCTGATGCTTTGCATCACTCGACTCCGCTGGCTGCCTTCAGAGCACTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTCGCAGTTGGGGTTCATaGTTCCGAGAAAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGARSWGS*FREKLG
Trigger: CCCCAGCTTTTCTCGGAACCATGAACCCCAACTGCG...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGCGCACCGGGCGCAGTTaGGGTTCATGGTTCCGAGAA +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVRTGRS*GSWFRE
Trigger: TTCTCGGAACCATGAACCCCAACTGCGCCCGGTGCG...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGGTAAACCGGGGCACTaGTCGGGATGTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVGKPGH*SGCGEA
Trigger: AGCCTCACCACATCCCGACCAGTGCCCCGGTTTACC...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGGTAAACCGGGGCACTaGTCGGGATGTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAGKPGH*SGCGEA
Trigger: AGCCTCACCACATCCCGACCAGTGCCCCGGTTTACC...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKALYGD*GCRLLV
Trigger: TACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGC...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRGRCAV*RLGLQA
Trigger: AGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGGAGTCGAGTGATGCAAAGCATCAGGGTGATGCGCTTTACACGACATGGCTGGGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSRVMQSIRVMRFTRHGWGRCAV*RLGLQA
Trigger: AGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCC...CCAGCCATGTCGTGTAAAGCGCATCACCCTGATGCTTTGCATCACTCGACTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCTTCCCGCCACCACCTaGGGCGCTGCGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDLPATT*GAALYG
Trigger: TCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CTCTGGAGCTCGGGCGTGTCTGCCACTACGCTGAAACCTTTGCCCTTGTTCTTCTGGCCTCCACGTAGTTaGCCGGCAGCATCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: LWSSGVSATTLKPLPLFFWPPRS*PAASPC
Trigger: ACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA...GAAGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTTTTACACGACATGGCTaGGGAGGCCCCTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WTLHIQDRPIEEGGTGWAFTRHG*GGPSEA
Trigger: TGCCTCTGAGGGGCCTCCCCAGCCATGTCGTGTAAA...AGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp TCCATGCCCTCGCCCCCGCTAGGGCCCATGCGGCTCTTCTCAAACTCCTCATGGTGTCTGCCACTACGCTaGAACCTTTGCCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SMPSPPLGPMRLFSNSSWCLPLR*NLCPCS
Trigger: AGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACA...CCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGCTGCTGCCGTCCTGTaGATCCCGACGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEAAAVL*IPTLWL
Trigger: GAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGC...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAACTGGTCGGGATGTGGTaGGGCTGCTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PREAHARSIQRENQEVDQLVGMW*GCCCSR
Trigger: CCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAG...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTGTCTGGTCGGGATGTGGTaGGGCTGCTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FRLTLAPTVPWAVLTSLCLVGMW*GCCCSR
Trigger: CCTGGAGCAGCAGCAGCCTCACCACATCCCGACCAG...ACAAAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCAATGTAGGGAGCCCCTaGCCTGGGGTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSNVGSP*PGVLAV
Trigger: GACTGCCAGGACCCCAGGTCAGGGGCTCCCTACATT...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TCCATGCCCTCGCCCCCGCTAGGGCCCATGCGGCTCTTCTCAAACTCCTCATGGCTCGGTTTCTTCATCTaGCTCTGGAGCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: SMPSPPLGPMRLFSNSSWLGFFI*LWSSLC
Trigger: ACAGAGTGAGCTCCAGAGTCAGATGAAGAAACCGAG...CCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR TCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTGGGGGCCATCCTCATaGAGCGAGGAGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLWGPSS*SEESSA
Trigger: GGCGCTGCTCTCCTCGCTTCATGAGGATGGCCCCCA...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp CCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTACACATCCAGGGGCAGCCTGAGAGCTaGAGGATGTGGGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: PQRAERWLYIQRWTLHIQGQPES*RMWGPS
Trigger: GGATGGCCCCCACATCCTTCAGCTCTCAGGCTGCCC...CTGGATGTGTAGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAATATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEYGDWG*RLLVAT
Trigger: GGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGTATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKYGDWG*RLLVAT
Trigger: GGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGCACCACCTGGGGCGCTaGGCTGTATGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEHHLGR*AVWRLG
Trigger: CCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCCGTCGTCGATCTGCTaGACGTTGACGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKPSSIC*TLTMVS
Trigger: GGACACCATCGTCAACGTGCAGCAGATCGACGACGG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAACCGTCGTCGATCTGCTaGACGTTGACGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEPSSIC*TLTMVS
Trigger: GGACACCATCGTCAACGTGCAGCAGATCGACGACGG...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTCCGTCGTCGATCTGCTaGACGTTGACGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAPSSIC*TLTMVS
Trigger: GGACACCATCGTCAACGTGCAGCAGATCGACGACGG...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTCCCCGTGTCGCCGGTaGGCTCCACCGTCCCGTACA +
Preference number: 4 (lower is better)
Translates to: YVTDLVLGLLDSLELGRVSPCRR*APPSRT
Trigger: TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGA...GACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATGACAGATGGGGGCGCTaGGGGTTCAGATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDDRWGR*GFRWPP
Trigger: TGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTC...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGTCCTGAGGCACCCTTaGCCTACACTTCGGGACCAT +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVVLRHP*PTLRDH
Trigger: ATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAACTTCCCGCCACCACCTaGGGCGCTGCGCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGELPATT*GAALYG
Trigger: TCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAG...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATTGGCCTCCACGTAGTTaGCCGGCAGCATCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDWPPRS*PAASPC
Trigger: ACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCGCTGCGGGTTCAGATaGCCTCCACGTAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDRCGFR*PPRSWP
Trigger: CGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCG...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTTGTGCTGAAGACAGATaGGGGCGCTGCGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECACAEDR*GRCGFR
Trigger: TCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACA...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGTGTGCTGAAGACAGATaGGGGCGCTGCGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKCAEDR*GRCGFR
Trigger: TCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACA...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGTGTGCTGAAGACAGATaGGGGCGCTGCGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVCAEDR*GRCGFR
Trigger: TCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACA...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKRDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTCAGCCCTGGAATGTGTaGGTATGTGAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAQPWNV*VCEELG
Trigger: GCCCAGCTCCTCACATACCCACACATTCCAGGGCTG...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAATGGCAGGGCCTGGTTaGGCTCAGGATGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKMAGPG*AQDENG
Trigger: CCCATTTTCATCCTGAGCCCAACCAGGCCCTGCCAT...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp GATGCAAAGCATCAGGGTGATGCGCTTTACACGACATGGCTGGGGAGGCCCCTCGTGTTCCCAGGTAGCTaGGGTAAGGAAACCCCACCC +
Preference number: 4 (lower is better)
Translates to: DAKHQGDALYTTWLGRPLVFPGS*GKETPP
Trigger: GGGTGGGGTTTCCTTACCCCAGCTACCTGGGAACAC...GAGGGGCCTCCCCAGCCATGTCGTGTAAAGCGCATCACCCTGATGCTTTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp CCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCAGGTAGCTGCGCTTTACACGACATaGCTGGGGAGGCCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSAGRPHAESCLVCSQVAALYTT*LGRPLR
Trigger: TCTGAGGGGCCTCCCCAGCCATGTCGTGTAAAGCGC...AGCTACCTGGGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp CAGAGATGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCAGCGGCACCCATGGGTaGAGTGAGTGGCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: QRWTLHIQDRPIEEGGTGSGTHG*SEWQDL
Trigger: TAAGTCCTGCCACTCACTCCACCCATGGGTGCCGCT...GCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp TATGGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGGTGTCTGCCACTACGCTaGAACCTTTGCCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: YGDWGCRLLVATIGLGHRCLPLR*NLCPCS
Trigger: AGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACA...CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGGTCCTGGGTCTTCTTaGTTCTCTGGAGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRGPGSS*FSGARA
Trigger: CGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCGCTGCTGCCGTCCTGTaGATCCCGACGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YVTDLVLGLLDSLELGRVAAAVL*IPTLWL
Trigger: GAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGC...GACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGCGATCTGCTGCACGTTaGCGATGGTGTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRRSAAR*RWCPRP
Trigger: AGGACGGGGACACCATCGTCAACGTGCAGCAGATCG...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGAAGACCAAAAGGTCCTaGGGCACCCTTGCCCTACAC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKKTKRS*GTLALH
Trigger: GTGTAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTT...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCCCCCATATAAAAAGATaGACTGGCGGCTTCACACAC +
Preference number: 4 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRPHIKR*TGGFTH
Trigger: GTGTGTGAAGCCGCCAGTTCATCTTTTTATATGGGG...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp CAGAGATGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCCTGGTTTCGAACTCCTaGCCTCAGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QRWTLHIQDRPIEEGGTGLVSNS*PQVICP
Trigger: TGGGCAGATCACCTGAGGTCAGGAGTTCGAAACCAG...GCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCATCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACTGGGGTAGTGTGCGTTaGAGTAGGGCTTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDWGSVR*SRASSR
Trigger: ACGAGAAGAAGCCCTACTGCAACGCACACTACCCCA...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR GCA 90 bp GAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGAGCTCGGGCGTGTCTaGCACTACGCTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: EEWTGHAQDGCDAVECAEELGRV*HYAETF
Trigger: AAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTC...TTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGCACGCCCAGGACGGATaGGATGCCGTGGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRHAQDG*DAVECA
Trigger: AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGTGCCCGCTGCAGGTCTaGGTGGGCAGGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPECPLQV*VGRRAK
Trigger: TTTTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCA...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTCGTGGGGAAAGGGGCTaGGGAAGAGAACTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECARGERG*GRELLV
Trigger: AACAAGGAGTTCTCTTCCGCAGCCCCTTTCCCCACG...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAAGACATACATGCTCCTaGCTCCGCACACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKRHTCS*LRTPGL
Trigger: AAGACCTGGTGTGCGGAGGCAGGAGCATGTATGTCT...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACCTGCAGACATACATaGTCCTGCCTCCGCACACCA +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKTCRHT*SCLRTP
Trigger: TGGTGTGCGGAGGCAGGAGCATGTATGTCTGCAGGT...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGTTAGCCCCAGCAGGCTaGAGACCCTATGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPELAPAG*RPYGSP
Trigger: GGGGCTGCCATAGGGTCTGCAGCCTGCTGGGGCTAA...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318008.11
ENST00000433206.6
CDS-3UTR GCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAAATACCTTCAGGTCCTaGCCCTCACCTGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKNTFRS*PSPVGT
Trigger: TGTACCCACAGGTGAGGGGCAGGACCTGAAGGTATT...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp CCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCAGGTAGCTCTTCAGACTAACTCTTaGGCCCACAGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSAGRPHAESCLVCSQVALQTNS*AHSALG
Trigger: GCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAG...AGCTACCTGGGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCGCAGTTGGGGTTCATaGTTCCGAGAAAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKRSWGS*FREKLG
Trigger: CCCCAGCTTTTCTCGGAACCATGAACCCCAACTGCG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKVFLIL*SSGVSA
Trigger: GGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGAC...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAVFLIL*SSGVSA
Trigger: GGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGAC...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGGAGTCGAGTGATGCAAAGCATCAGGGTGATGCGCTTTACACGACATGGCTGGGGTAAACCGGGGCACTaGTCGGGATGTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSRVMQSIRVMRFTRHGWGKPGH*SGCGEA
Trigger: AGCCTCACCACATCCCGACCAGTGCCCCGGTTTACC...CCAGCCATGTCGTGTAAAGCGCATCACCCTGATGCTTTGCATCACTCGACTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAACGCTGCGGGTTCAGATaGCCTCCACGTAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGERCGFR*PPRSWP
Trigger: CGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCG...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECARDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCTGAAGGATGTGGGGGCCATCCTCATGAAGCGAGGAGAGCAGCGCCCAGTGCTAGCCTCCCGAGTAGCTaGGATTATGAACATGCACCA +
Preference number: 4 (lower is better)
Translates to: AEGCGGHPHEARRAAPSASLPSS*DYEHAP
Trigger: TGGTGCATGTTCATAATCCCAGCTACTCGGGAGGCT...AGCACTGGGCGCTGCTCTCCTCGCTTCATGAGGATGGCCCCCACATCCTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
3UTR CAA 72 bp AGCAGCGCCCAGTGCTGGAAGGCCCCATGCAGAAAGTaGCCTTGTGTGTTCCCAGGTAGCTGGGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SSAQCWKAPCRK*PCVFPGSWGKE
Trigger: TTCCTTACCCCAGCTACCTGGGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGGCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCGCTCACTCTGTTGCTTaGGGCGAAGGTTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSAHSVA*GEGFPG
Trigger: CCCCGGAAAACCTTCGCCTCAAGCAACAGAGTGAGC...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR TCA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGTCCTGGGTCTTCTTaGTTCTCTGGAGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: PREAHARSIQRENQEVDQGPGSS*FSGARA
Trigger: CGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACC...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGTGCCGTGGAATGTGCTaGAGACAGATGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPECRGMC*RQMGAL
Trigger: CAGCGCCCCCATCTGTCTTCAGCACATTCCACGGCA...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTTGCAAAGCATCAGGGTaGTGCGCTTTACACGACATG +
Preference number: 4 (lower is better)
Translates to: WTLHIQDRPIEEGGTGWACKASG*CALHDM
Trigger: CATGTCGTGTAAAGCGCATCACCCTGATGCTTTGCA...AGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GATGCAAAGCATCAGGGTGATGCGCTTTACACGACATGGCTGGGGAGGCCCCTCTCTTGTTTGTCCCCCTaGCTGGAATGTAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: DAKHQGDALYTTWLGRPLSCLSP*LECKPP
Trigger: TGGGGGCTTACATTCCAGTCAGGGGGACAAACAAGA...GAGGGGCCTCCCCAGCCATGTCGTGTAAAGCGCATCACCCTGATGCTTTGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp ACGCTCTGGCTCCATGCCCTCGCCCCCGCTAGGGCCCATGCGGCTCTTCTCAAATGGAAGCATGCTTTATaGCAGAACTTATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: TLWLHALAPARAHAALLKWKHAL*QNLSRQ
Trigger: CTGTCTGGATAAGTTCTGGCATAAAGCATGCTTCCA...TTTGAGAAGAGCCGCATGGGCCCTAGCGGGGGCGAGGGCATGGAGCCAGAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGTGGGGTAGTGTGCGTTaGAGTAGGGCTTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVWGSVR*SRASSR
Trigger: ACGAGAAGAAGCCCTACTGCAACGCACACTACCCCA...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR GCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATGGCAAAATCACAGTGTaGGAAGGAACGCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDGKITV*EGTRGE
Trigger: CTCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCC...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCGGCAAAATCACAGTGTaGGAAGGAACGCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSGKITV*EGTRGE
Trigger: CTCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCC...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCGTCCTGAGGCACCCTTaGCCTACACTTCGGGACCAT +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSVLRHP*PTLRDH
Trigger: ATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGAGACATACATGCTCCTaGCTCCGCACACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVRHTCS*LRTPGL
Trigger: AAGACCTGGTGTGCGGAGGCAGGAGCATGTATGTCT...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGAGTTCACCTTCTCCGTaGGATACACGATCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVSSPSP*DTRSCR
Trigger: GCGGCAAGATCGTGTATCCCACGGAGAAGGTGAACT...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCATTTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TDGGAAGSDGLHVVGRQHLLIWS*VFLILW
Trigger: CCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAA...ATGCTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRALYGD*GCRLLV
Trigger: TACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCTGTGCTGAAGACAGATaGGGGCGCTGCGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSCAEDR*GRCGFR
Trigger: TCTGAACCCGCAGCGCCCCCATCTGTCTTCAGCACA...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCCAGGAACCAAGAAGTaGATCCCACTCTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKPGTKK*IPLWGM
Trigger: CATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTGCGCCCACAGTGCCCTaGGCAGTCCTAACATCCCTT +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLAPTVP*AVLTSL
Trigger: AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGC...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAATGTCCGCCACCATGGTaGAGGACTGCTTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGECPPPW*RTAWGS
Trigger: ACTACCCCAAGCAGTCCTTCACCATGGTGGCGGACA...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGTGGAGCTCACTCTGTTaGTTGAGGCGAAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKWSSLC*LRRRFS
Trigger: GGAAAACCTTCGCCTCAAGCAACAGAGTGAGCTCCA...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR GCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATGAGCTCGGGCGTGTCTaGCACTACGCTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDELGRV*HYAETF
Trigger: AAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTC...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAATATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: PREAHARSIQRENQEVDQYGDWG*RLLVAT
Trigger: GGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGTATGGAGACTGGGGCTaGAGGCTCCTTGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEYGDWG*RLLVAT
Trigger: GGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TTTGTGTGCCCAGAGCATCAGACTCCAGCCAGCCATTATCTCAGGCGATTTTATCACCACCTGGGGCGCTaGGCTGTATGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: FVCPEHQTPASHYLRRFYHHLGR*AVWRLG
Trigger: CCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTG...ATAAAATCGCCTGAGATAATGGCTGGCTGGAGTCTGATGCTCTGGGCACACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGCAGCCGTCGTCGATCTaGTGCACGTTGACGATGGTG +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEQPSSI*CTLTMV
Trigger: CACCATCGTCAACGTGCAGCAGATCGACGACGGCTG...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCCCCCAGAGAGGCCCATaGCCGTTCCATCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: YVTDLVLGLLDSLELGRVPQRGP*PFHPER
Trigger: TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGG...GACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGGCAAAATCACAGTGTaGGAAGGAACGCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEGKITV*EGTRGE
Trigger: CTCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCC...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCGTGGGGAAAGGGGCTaGGGAAGAGAACTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSRGERG*GRELLV
Trigger: AACAAGGAGTTCTCTTCCGCAGCCCCTTTCCCCACG...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAATTGCAGGTCTCGCAATaGAAGCATGCTTTATGCCAG +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKLQVSQ*KHALCQ
Trigger: CTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAA...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGEALYGD*GCRLLV
Trigger: TACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGC...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEALYGD*GCRLLV
Trigger: TACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGC...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLALYGD*GCRLLV
Trigger: TACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGC...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDRDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCATGGCAGGGCCTGGTTaGGCTCAGGATGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSMAGPG*AQDENG
Trigger: CCCATTTTCATCCTGAGCCCAACCAGGCCCTGCCAT...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGATGGCAGGGCCTGGTTaGGCTCAGGATGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRMAGPG*AQDENG
Trigger: CCCATTTTCATCCTGAGCCCAACCAGGCCCTGCCAT...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp AGTGAGTGGCAGGACTTACAGAGCCGGGACTTCAGCTCTGAGGGCTCAGGAAGCACTGGCTGGGCTGCCTaGAACCTTATACTTCAGACT +
Preference number: 4 (lower is better)
Translates to: SEWQDLQSRDFSSEGSGSTGWAA*NLILQT
Trigger: AGTCTGAAGTATAAGGTTCCAGGCAGCCCAGCCAGT...GCTTCCTGAGCCCTCAGAGCTGAAGTCCCGGCTCTGTAAGTCCTGCCACTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGGGTATTTTATGTTACTaGTCTGGTCCTGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRGILCY*SGPGSS
Trigger: AGAAGACCCAGGACCAGATCAGTAACATAAAATACC...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp TATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGCTGCTGCCGTCCTGTaGATCCCGACGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YFMLLIWSWVFLILWSSGAAAVL*IPTLWL
Trigger: GAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGC...GCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACACACATACACACGGATaGAATGTTTGGACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDTHTHG*NVWTEA
Trigger: TGCCTCTGTCCAAACATTTCATCCGTGTGTATGTGT...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTCTACGTGAGCTACTTTaGATTCCCAGGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLLRELL*IPRHPA
Trigger: GGCTGGGTGCCTGGGAATTCAAAGTAGCTCACGTAG...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GAATGTAAGCCCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTCTGATCTCGAACTCCTaGCCTCAAGTGACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ECKPPEGREVALYSEMDPLISNS*PQVTCP
Trigger: CGGGCAGGTCACTTGAGGTCAGGAGTTCGAGATCAG...AGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGGGCTTACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGCTCGCAATGGAAGCATaGTTTATGCCAGAACTTATC +
Preference number: 4 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRLAMEA*FMPELI
Trigger: GATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAG...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGCTCGGGCGTGTCTaGCACTACGCTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEELGRV*HYAETF
Trigger: AAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTC...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp TGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGGGCCGCCGGTAGCTaGTGCCGTCCTGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: WYFMLLIWSWVFLILWSSGAAGS*CRPVNP
Trigger: GGGATTCACAGGACGGCAGCAGCTACCGGCGGCCCC...CGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATTCCCCGTGTCGCCGGTaGGCTCCACCGTCCCGTACA +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDSPCRR*APPSRT
Trigger: TGTACGGGACGGTGGAGCGCACCGGCGACACGGGGA...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCAGACATACATGCTCCTaGCTCCGCACACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSRHTCS*LRTPGL
Trigger: AAGACCTGGTGTGCGGAGGCAGGAGCATGTATGTCT...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCAATACCTTCAGGTCCTaGCCCTCACCTGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSNTFRS*PSPVGT
Trigger: TGTACCCACAGGTGAGGGGCAGGACCTGAAGGTATT...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp CCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCAGGTAGCTTCACCCAGGCTGGAGTaGAATAGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSAGRPHAESCLVCSQVASPRLE*NSAILA
Trigger: AGCCAAGATTGCACTATTGCACTCCAGCCTGGGTGA...AGCTACCTGGGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATAGTTCACCTTCTCCGTaGGATACACGATCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDSSPSP*DTRSCR
Trigger: GCGGCAAGATCGTGTATCCCACGGAGAAGGTGAACT...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACTTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDLLIWS*VFLILW
Trigger: CCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAA...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCGGCTCTTCTCAAACTCCTCATGGTATTTTATGTTACTGATCTGGTCCTGGGTGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AALLKLLMVFYVTDLVLGGRCAV*RLGLQA
Trigger: AGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCC...ACCCAGGACCAGATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCCAGGAACCAAGAAGTaGATCCCACTCTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSPGTKK*IPLWGM
Trigger: CATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGG...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGCCAGGAACCAAGAAGTaGATCCCACTCTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRPGTKK*IPLWGM
Trigger: CATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGG...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCCAGGAACCAAGAAGTaGATCCCACTCTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDPGTKK*IPLWGM
Trigger: CATTCCCCAGAGTGGGATCCACTTCTTGGTTCCTGG...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATTGCATCTCAAGCCCCTaGCCTCGGTTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDCISSP*PRFLHL
Trigger: CAGATGAAGAAACCGAGGCCAGGGGCTTGAGATGCA...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR CCA 90 bp AGTGAGTGGCAGGACTTACAGAGCCGGGACTTCAGCTCTGAGGGCTCAGGAAGCTCACCCCATTCCTGCTaGGCTTATTCACTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SEWQDLQSRDFSSEGSGSSPHSC*AYSLAL
Trigger: TAGAGCAAGTGAATAAGCCCAGCAGGAATGGGGTGA...GCTTCCTGAGCCCTCAGAGCTGAAGTCCCGGCTCTGTAAGTCCTGCCACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCTGTCTGCCACTACGCTaGAACCTTTGCCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSCLPLR*NLCPCS
Trigger: AGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACA...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATTGTCTGCCACTACGCTaGAACCTTTGCCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDCLPLR*NLCPCS
Trigger: AGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACA...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAAGAAAGGCAAGAACCTaGCCCAAGCTGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGERKART*PKLCFL
Trigger: GAGGAAGCACAGCTTGGGTCAGGTTCTTGCCTTTCT...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTACACATACACACGGATaGAATGTTTGGACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TEEWTGHAQDGCDAVECATHTHG*NVWTEA
Trigger: TGCCTCTGTCCAAACATTTCATCCGTGTGTATGTGT...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp TGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGCCTGGGCCAGCACGGTaGCTCTTAGTGGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WYFMLLIWSWVFLILWSSPGPAR*LLVGGP
Trigger: AGGGCCTCCCACTAAGAGTCACCGTGCTGGCCCAGG...CGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR TCA 90 bp CCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCAGGTAGCTCTCTGCTCACAAGGCTaGGATCCTTATCATCACACA +
Preference number: 4 (lower is better)
Translates to: PSAGRPHAESCLVCSQVALCSQG*DPYHHT
Trigger: TGTGTGATGATAAGGATCTCAGCCTTGTGAGCAGAG...AGCTACCTGGGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp GAATGTAAGCCCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTTTGGAAAAAGTGCTCTaGAGGCAGCCAGCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: ECKPPEGREVALYSEMDPLEKVL*RQPAES
Trigger: CGACTCCGCTGGCTGCCTTCAGAGCACTTTTTCCAA...AGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGGGCTTACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACCTCGCAATGGAAGCATaGTTTATGCCAGAACTTATC +
Preference number: 4 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDLAMEA*FMPELI
Trigger: GATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAG...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCTGGAGCTCACTCTGTTaGTTGAGGCGAAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSWSSLC*LRRRFS
Trigger: GGAAAACCTTCGCCTCAAGCAACAGAGTGAGCTCCA...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR GCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGTGGAGCTCACTCTGTTaGTTGAGGCGAAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRWSSLC*LRRRFS
Trigger: GGAAAACCTTCGCCTCAAGCAACAGAGTGAGCTCCA...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGAGCCGCCGGTAGCTGCTaGCGTCCTGTGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRAAGSC*RPVNPD
Trigger: GTCGGGATTCACAGGACGGCAGCAGCTACCGGCGGC...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGACTCCCATTCCAGCCCTaGCTCCCCCAGAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRLPFQP*LPQRGP
Trigger: TGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGGGAG...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AAAAAGTGCTCTGAAGGCAGCCAGCGGAGTCGAGTGATGCAAAGCATCAGGGTGTGCTGGAAGGCCCCATaGAGAAAGTTGCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: KKCSEGSQRSRVMQSIRVCWKAP*RKLPCV
Trigger: CACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCA...CACCCTGATGCTTTGCATCACTCGACTCCGCTGGCTGCCTTCAGAGCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTAGGGACTGGCTGGGCTaGCTGGAACCTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLRDWLG*LEPYTS
Trigger: TGAAGTATAAGGTTCCAGGCAGCCCAGCCAGTCCCT...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGAGTTCACCTTCTCCGTaGGATACACGATCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPESSPSP*DTRSCR
Trigger: GCGGCAAGATCGTGTATCCCACGGAGAAGGTGAACT...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATGGGCGCTGCGCTGTATaGAGACTGGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDGRCAV*RLGLQA
Trigger: AGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCC...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGACGGATGCGATGCCGTaGAATGTGCTGAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRTDAMP*NVLKTD
Trigger: ATCTGTCTTCAGCACATTCCACGGCATCGCATCCGT...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCAGGTAGCTCAGAGGGCAGAGAGGTaGCTTTATATTCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: PSAGRPHAESCLVCSQVAQRAER*LYIQRW
Trigger: CCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTG...AGCTACCTGGGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGGTATTTTATGTTACTaGTCTGGTCCTGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVGILCY*SGPGSS
Trigger: AGAAGACCCAGGACCAGATCAGTAACATAAAATACC...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp TGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTGCCACTACGCTGGGTATTTTATGTTACTaGTCTGGTCCTGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: WSWVFLILWSSGVSATTLGILCY*SGPGSS
Trigger: AGAAGACCCAGGACCAGATCAGTAACATAAAATACC...CAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR TCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGGGTATTTTATGTTACTaGTCTGGTCCTGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKGILCY*SGPGSS
Trigger: AGAAGACCCAGGACCAGATCAGTAACATAAAATACC...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGCCCCATATAAAAAGATaGACTGGCGGCTTCACACAC +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRPHIKR*TGGFTH
Trigger: GTGTGTGAAGCCGCCAGTTCATCTTTTTATATGGGG...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCCCCATATAAAAAGATaGACTGGCGGCTTCACACAC +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSPHIKR*TGGFTH
Trigger: GTGTGTGAAGCCGCCAGTTCATCTTTTTATATGGGG...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGGAGCTTTATGTAAGTaGGGAAACTCTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRGALCK*GNSQGK
Trigger: CTTCCCCTGAGAGTTTCCTCACTTACATAAAGCTCC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435347.7
CDS-3UTR TCA 90 bp TTTGTGTGCCCAGAGCATCAGACTCCAGCCAGCCATTATCTCAGGCGATTTTATAGGGCTCAGGAAGCCTaGTCTCACCCCATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FVCPEHQTPASHYLRRFYRAQEA*SHPIPA
Trigger: AGCAGGAATGGGGTGAGATCAGGCTTCCTGAGCCCT...ATAAAATCGCCTGAGATAATGGCTGGCTGGAGTCTGATGCTCTGGGCACACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGTGGAAGCATGCTTTATaGCAGAACTTATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKWKHAL*QNLSRQ
Trigger: CTGTCTGGATAAGTTCTGGCATAAAGCATGCTTCCA...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCTCGCAATGGAAGCATaGTTTATGCCAGAACTTATC +
Preference number: 4 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKLAMEA*FMPELI
Trigger: GATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGATTAGCCCCAGCAGGCTaGAGACCCTATGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRLAPAG*RPYGSP
Trigger: GGGGCTGCCATAGGGTCTGCAGCCTGCTGGGGCTAA...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318008.11
ENST00000433206.6
CDS-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTACAACAGAGGGTGGGTaGAAAGGTCAGGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLTTEGG*KGQENP
Trigger: TGGATTCTCCTGACCTTTGCACCCACCCTCTGTTGT...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTATCCATCCCTCACCCTaGTGTCTTTCTCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLIHPSP*CLSLHS
Trigger: GCTGTGAAGAGAAAGACAGCAGGGTGAGGGATGGAT...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp TATGGAGACTGGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGGTTTATGTTACTGATCTaGTCCTGGGTCTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: YGDWGCRLLVATIGLGHRFMLLI*SWVFLI
Trigger: AATCAAGAAGACCCAGGACCAGATCAGTAACATAAA...CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAACGGATGCGATGCCGTaGAATGTGCTGAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGETDAMP*NVLKTD
Trigger: ATCTGTCTTCAGCACATTCCACGGCATCGCATCCGT...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGACGGATGCGATGCCGTaGAATGTGCTGAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPETDAMP*NVLKTD
Trigger: ATCTGTCTTCAGCACATTCCACGGCATCGCATCCGT...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: PSREKTKKSIKGEACQRRVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTGTACACACAACAGAGGGTaGGTGCAAAGGTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: FRLTLAPTVPWAVLTSLCTHNRG*VQRSGE
Trigger: TTCTCCTGACCTTTGCACCCACCCTCTGTTGTGTGT...ACAAAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp TTTGTGTGCCCAGAGCATCAGACTCCAGCCAGCCATTATCTCAGGCGATTTTATGGTCAGGAGAATCCATaGGCTGTGTCCAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FVCPEHQTPASHYLRRFYGQENP*AVSKPS
Trigger: GGAAGGCTTGGACACAGCTCATGGATTCTCCTGACC...ATAAAATCGCCTGAGATAATGGCTGGCTGGAGTCTGATGCTCTGGGCACACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp GCGGCTCTTCTCAAACTCCTCATGGTATTTTATGTTACTGATCTGGTCCTGGGTCAGCCGTCGTCGATCTaGTGCACGTTGACGATGGTG +
Preference number: 4 (lower is better)
Translates to: AALLKLLMVFYVTDLVLGQPSSI*CTLTMV
Trigger: CACCATCGTCAACGTGCAGCAGATCGACGACGGCTG...ACCCAGGACCAGATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTATCCCTTTGTTTGTGTaGCCAGAGCATCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLIPLFV*PEHQTP
Trigger: TGGAGTCTGATGCTCTGGGCACACAAACAAAGGGAT...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCTTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSLLIWS*VFLILW
Trigger: CCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAA...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAATTTATGTTACTGATCTaGTCCTGGGTCTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKFMLLI*SWVFLI
Trigger: AATCAAGAAGACCCAGGACCAGATCAGTAACATAAA...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGTATAAAAAGATGAACTaGCGGCTTCACACACTCACA +
Preference number: 4 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVYKKMN*RLHTLT
Trigger: TGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTTATA...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp AGAGCAGCGCCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCAGAGCTCTTTTTAGTTaGAAAAAGTGCTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAAPSAGRPHAESCLVCSRALFS*KKCSEG
Trigger: GCCTTCAGAGCACTTTTTCCAACTAAAAAGAGCTCT...GGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGGCGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp TTTGTGTGCCCAGAGCATCAGACTCCAGCCAGCCATTATCTCAGGCGATTTTATGTTTGTCCCCCTGACTaGAATGTAAGCCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVCPEHQTPASHYLRRFYVCPPD*NVSPQR
Trigger: CCTCTGGGGGCTTACATTCCAGTCAGGGGGACAAAC...ATAAAATCGCCTGAGATAATGGCTGGCTGGAGTCTGATGCTCTGGGCACACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp GCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCTGGAAGCATGCTTTATaGCAGAACTTATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: AHARSIQRENQEVDQGGSWKHAL*QNLSRQ
Trigger: CTGTCTGGATAAGTTCTGGCATAAAGCATGCTTCCA...GCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCTCGCAATGGAAGCATaGTTTATGCCAGAACTTATC +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDLAMEA*FMPELI
Trigger: GATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAG...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGACAGCCGTCGTCGATCTaGTGCACGTTGACGATGGTG +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRQPSSI*CTLTMV
Trigger: CACCATCGTCAACGTGCAGCAGATCGACGACGGCTG...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGAGTCCTGAGGCACCCTTaGCCTACACTTCGGGACCAT +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRVLRHP*PTLRDH
Trigger: ATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp CGGCTCTTCTCAAACTCCTCATGGTATTTTATGTTACTGATCTGGTCCTGGGTCCAGATACAGAAGCCCTaGATCTCAAGCCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLFSNSSWYFMLLIWSWVQIQKP*ISSPWP
Trigger: AGGCCAGGGGCTTGAGATGCAGGGCTTCTGTATCTG...GACCCAGGACCAGATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR GCA 90 bp GAATGTAAGCCCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTATCTCACCCCATTCCTaGTGGGCTTATTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: ECKPPEGREVALYSEMDPISPHS*WAYSLA
Trigger: AGCAAGTGAATAAGCCCAGCAGGAATGGGGTGAGAT...AGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGGGCTTACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR GCA 90 bp TACTTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTTTCTTTGGAGATATTaGTCTGTCACCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: YFRLTLAPTVPWAVLTSLFLWRY*SVTQAG
Trigger: TCCAGCCTGGGTGACAGAGCAATATCTCCAAAGAAA...AAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp TATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTTGCAGGTCTCGCAATaGAAGCATGCTTTATGCCAG +
Preference number: 4 (lower is better)
Translates to: YVTDLVLGLLDSLELGRVLQVSQ*KHALCQ
Trigger: CTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAA...GACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAATTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGELLIWS*VFLILW
Trigger: CCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAA...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp CGGCTCTTCTCAAACTCCTCATGGTATTTTATGTTACTGATCTGGTCCTGGGTCAGAGACACTGAAGAATaGACGGGTCACGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RLFSNSSWYFMLLIWSWVRDTEE*TGHAQD
Trigger: GTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCT...GACCCAGGACCAGATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGGGAGCCCGCAGAAGTaGCAGAAGAAGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: YFMLLIWSWVFLILWSSGGSPQK*QKKASV
Trigger: AACTGAAGCCTTCTTCTGCCACTTCTGCGGGCTCCC...GCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGTATTTTATGTTACTaGTCTGGTCCTGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PREAHARSIQRENQEVDQGILCY*SGPGSS
Trigger: AGAAGACCCAGGACCAGATCAGTAACATAAAATACC...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATAAGACCAAAAGGTCCTaGGGCACCCTTGCCCTACAC +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDKTKRS*GTLALH
Trigger: GTGTAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTT...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAATGGAAGCATGCTTTATaGCAGAACTTATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: RPMPVPSREKTKKSIKGEWKHAL*QNLSRQ
Trigger: CTGTCTGGATAAGTTCTGGCATAAAGCATGCTTCCA...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GAGCTCGGGCGTGTCTGCCACTACGCTGAAACCTTTGCCCTTGTTCTTCTCAAATGGAAGCATGCTTTATaGCAGAACTTATCCAGACAG +
Preference number: 4 (lower is better)
Translates to: ELGRVCHYAETFALVLLKWKHAL*QNLSRQ
Trigger: CTGTCTGGATAAGTTCTGGCATAAAGCATGCTTCCA...TTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR GCA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGCTCGCAATGGAAGCATaGTTTATGCCAGAACTTATC +
Preference number: 4 (lower is better)
Translates to: RSIQRENQEVDQGGSLPELAMEA*FMPELI
Trigger: GATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAG...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGACGTGGGGAAAGGGGCTaGGGAAGAGAACTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRRGERG*GRELLV
Trigger: AACAAGGAGTTCTCTTCCGCAGCCCCTTTCCCCACG...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATTATAAAAAGATGAACTaGCGGCTTCACACACTCACA +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDYKKMN*RLHTLT
Trigger: TGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTTATA...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp TTTGTGTGCCCAGAGCATCAGACTCCAGCCAGCCATTATCTCAGGCGATTTTATAGGGTTTCACCATGTTaGCCAGGCTGGTTTCGAACT +
Preference number: 4 (lower is better)
Translates to: FVCPEHQTPASHYLRRFYRVSPC*PGWFRT
Trigger: AGTTCGAAACCAGCCTGGCCAACATGGTGAAACCCT...ATAAAATCGCCTGAGATAATGGCTGGCTGGAGTCTGATGCTCTGGGCACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR TCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATAGAAAGGCAAGAACCTaGCCCAAGCTGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDRKART*PKLCFL
Trigger: GAGGAAGCACAGCTTGGGTCAGGTTCTTGCCTTTCT...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp ATGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGAGCTCGGGCGTGTCTaGCACTACGCTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: MVFYVTDLVLGLLDSLELELGRV*HYAETF
Trigger: AAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTC...GAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR GCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATAATACCTTCAGGTCCTaGCCCTCACCTGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDNTFRS*PSPVGT
Trigger: TGTACCCACAGGTGAGGGGCAGGACCTGAAGGTATT...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp AAAAAGTGCTCTGAAGGCAGCCAGCGGAGTCGAGTGATGCAAAGCATCAGGGTGTCTAAGTATCTGTTCTaGTCCTACGTGAGCTACTTT +
Preference number: 4 (lower is better)
Translates to: KKCSEGSQRSRVMQSIRVSKYLF*SYVSYF
Trigger: AAAGTAGCTCACGTAGGAGCAGAACAGATACTTAGA...CACCCTGATGCTTTGCATCACTCGACTCCGCTGGCTGCCTTCAGAGCACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp ATGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCCGCAGTTGGGGTTCATaGTTCCGAGAAAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MVFYVTDLVLGLLDSLELRSWGS*FREKLG
Trigger: CCCCAGCTTTTCTCGGAACCATGAACCCCAACTGCG...GAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp ATGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: MVFYVTDLVLGLLDSLELVFLIL*SSGVSA
Trigger: GGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGAC...GAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATTTTATGTTACTGATCTaGTCCTGGGTCTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: SPREAHARSIQRENQEVDFMLLI*SWVFLI
Trigger: AATCAAGAAGACCCAGGACCAGATCAGTAACATAAA...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR TCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGATGTCTGCCACTACGCTaGAACCTTTGCCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRCLPLR*NLCPCS
Trigger: AGAACAAGGGCAAAGGTTTCAGCGTAGTGGCAGACA...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR GCA 90 bp CCCCAGAGGGCAGAGAGGTGGCTTTATATTCAGAGATGGACCCTACACATCCAGGAACATGCACCACCATaGCGAGCTAATTTTATATTT +
Preference number: 4 (lower is better)
Translates to: PQRAERWLYIQRWTLHIQEHAPP*RANFIF
Trigger: AAATATAAAATTAGCTCGGCATGGTGGTGCATGTTC...CTGGATGTGTAGGGTCCATCTCTGAATATAAAGCCACCTCTCTGCCCTCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CCA 90 bp TGGTATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGACGGATGCGATGCCGTaGAATGTGCTGAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: WYFMLLIWSWVFLILWSSTDAMP*NVLKTD
Trigger: ATCTGTCTTCAGCACATTCCACGGCATCGCATCCGT...CGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGATTGCAGGTCTCGCAATaGAAGCATGCTTTATGCCAG +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRLQVSQ*KHALCQ
Trigger: CTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAA...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATTTGCAGGTCTCGCAATaGAAGCATGCTTTATGCCAG +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDLQVSQ*KHALCQ
Trigger: CTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAA...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGAGTTGGCAAAAGAAGCTaGAAGAGGGGTAGGAATCAC +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRVGKRS*KRGRNH
Trigger: GTGATTCCTACCCCTCTTCCAGCTTCTTTTGCCAAC...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR TCA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATACACATACACACGGATaGAATGTTTGGACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDTHTHG*NVWTEA
Trigger: TGCCTCTGTCCAAACATTTCATCCGTGTGTATGTGT...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CCA 90 bp CCCATGCGGCTCTTCTCAAACTCCTCATGGTATTTTATGTTACTGATCTGGTCCTTTATGTTACTGATCTaGTCCTGGGTCTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: PMRLFSNSSWYFMLLIWSFMLLI*SWVFLI
Trigger: AATCAAGAAGACCCAGGACCAGATCAGTAACATAAA...GGACCAGATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCGCATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CCA 90 bp GGCTTCACACACTCACACACATACACATACACACGGATGAAATGTTTGGACAGATATAAAAAGATGAACTaGCGGCTTCACACACTCACA +
Preference number: 4 (lower is better)
Translates to: GFTHSHTYTYTRMKCLDRYKKMN*RLHTLT
Trigger: TGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTTATA...TCTGTCCAAACATTTCATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS CCA 90 bp GCGGGGACGCCTGAGCTCACGCGCGTCCTGTTCCCCGAGGCGAGCTaGCGGGAGGCGGCCGCGGCTGCAACTACACAGGCAGCAGCGACG +
Preference number: 5 (lower is better)
Translates to: AGTPELTRVLFPEAS*REAAAAATTQAAAT
Trigger: CGTCGCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCCCGCCAGCTCGCCTCGGGGAACAGGACGCGCGTGAGCTCAGGCGTCCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000443937.7
ENST00000584106.1
ENST00000585841.5
CDS CCA 90 bp GGAGGCGGCCGCGGCTGCAACTACACAGGCAGCAGCGACGGCGGCTaGAGCTGGGGAACTGGCCTCCGCCTCCGCCCTCCTTCCCCTAAT +
Preference number: 5 (lower is better)
Translates to: GGGRGCNYTGSSDGG*SWGTGLRLRPPSPN
Trigger: ATTAGGGGAAGGAGGGCGGAGGCGGAGGCCAGTTCCCCAGCTCCAGCCGCCGTCGCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433206.6
ENST00000585841.5
CDS-3UTR CAA 90 bp ACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTGGGGCTGCAGCCGCACCGGGCGCAGTaGGGGTTCATGGTTCCGAGA +
Preference number: 5 (lower is better)
Translates to: TASRHHLGRCAVWRLGLQPHRAQ*GFMVPR
Trigger: TCTCGGAACCATGAACCCCAACTGCGCCCGGTGCGG...CTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp CGCTGTAGTCATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCCCGCACCGGGCGCAGTaGGGGTTCATGGTTCCGAGA +
Preference number: 5 (lower is better)
Translates to: RCSHTPRGTASRHHLGRCPHRAQ*GFMVPR
Trigger: TCTCGGAACCATGAACCCCAACTGCGCCCGGTGCGG...GCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATGACTACAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS CCA 90 bp GGCCGCGGCTGCAACTACACAGGCAGCAGCGACGGCGGCTGGAGCTaGGGAACTGGCCTCCGCCTCCGCCCTCCTTCCCCTAATAAACAC +
Preference number: 5 (lower is better)
Translates to: GRGCNYTGSSDGGWS*GTGLRLRPPSPNKH
Trigger: GTGTTTATTAGGGGAAGGAGGGCGGAGGCGGAGGCCAGTTCCCCAGCTCCAGCCGCCGTCGCTGCTGCCTGTGTAGTTGCAGCCGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433206.6
CDS CCA 90 bp GTTACTCACCCCGCCACCACCTGGGGCGCTGCGCTGTATGGAGACTaGGGCTGCAGGCTCCTTGTAGCCACCATAGGACTGGGCCACCGG +
Preference number: 5 (lower is better)
Translates to: VTHPATTWGAALYGD*GCRLLVATIGLGHR
Trigger: CCGGTGGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAGTCTCCATACAGCGCAGCGCCCCAGGTGGTGGCGGGGTGAGTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS CCA 90 bp AGAGCATGCCCTCCTGGGAACTTCGTCCTATGCTTGGGCACGCCCTaGCCCGGCCCCACAGGAGGACTTCAGTGTCCACCACCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: RACPPGNFVLCLGTP*PGPTGGLQCPPPRP
Trigger: CGGCCTTGGTGGTGGACACTGAAGTCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS CCA 90 bp AGGCACTGGCCTCATTCACATCTGCCAGGCTTGCGTCTGCCAGGCTaGCAGGAAGGGGACCAAACAGAGGGCAGCAGGGATGCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: RHWPHSHLPGLRLPG*QEGDQTEGSRDAAG
Trigger: CCCTGCGGCATCCCTGCTGCCCTCTGTTTGGTCCCCTTCCTGCCAGCCTGGCAGACGCAAGCCTGGCAGATGTGAATGAGGCCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS CCA 90 bp GGGCTTCTCACAGAGCATGCCCTCCTGGGAACTTCGTCCTATGCTTaGGCACGCCCTGGCCCGGCCCCACAGGAGGACTTCAGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: GLLTEHALLGTSSYA*ARPGPAPQEDFSVH
Trigger: GTGGACACTGAAGTCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCTGTGAGAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS-3UTR CAA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCGGTCCTGAGGCACCCTaGCCCTACACTTCGGGACCA +
Preference number: 5 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRGPEAP*PYTSGP
Trigger: TGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGACC...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS TCA 90 bp GAAGAGCAGGCTGATGTGGGGGAGGAGGCCAAGGAAGGGCGGAAATaGCTGCAATGTCAGCACCCAGGCGCAGACCAGGGGAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: EEQADVGEEAKEGRK*LQCQHPGADQGRPG
Trigger: ACCTGGCCTCCCCTGGTCTGCGCCTGGGTGCTGACATTGCAGTCATTTCCGCCCTTCCTTGGCCTCCTCCCCCACATCAGCCTGCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS GCA 90 bp TCTGCCAGGCTGGCAGGAAGGGGACCAAACAGAGGGCAGCAGGGATaGCGCAGGGCAGGGCAAGAGCTCACGTTACTGATCTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SARLAGRGPNRGQQG*RRAGQELTLLIWSW
Trigger: CCAGGACCAGATCAGTAACGTGAGCTCTTGCCCTGCCCTGCGGCATCCCTGCTGCCCTCTGTTTGGTCCCCTTCCTGCCAGCCTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS GCA 90 bp CTCTGGGCTTCTCACAGAGCATGCCCTCCTGGGAACTTCGTCCTATaGTTGGGCACGCCCTGGCCCGGCCCCACAGGAGGACTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LWASHRACPPGNFVL*LGTPWPGPTGGLQC
Trigger: ACACTGAAGTCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCTGTGAGAAGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS-3UTR CAA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACCCGCACCGGGCGCAGTaGGGGTTCATGGTTCCGAGA +
Preference number: 5 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDPHRAQ*GFMVPR
Trigger: TCTCGGAACCATGAACCCCAACTGCGCCCGGTGCGG...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp GTCCTGAGGCACCCTTGCCCTACACTTCGGGACCATGGCTTCCAGCCTAGGAGGGGTCCTGAGGCACCCTaGCCCTACACTTCGGGACCA +
Preference number: 5 (lower is better)
Translates to: VLRHPCPTLRDHGFQPRRGPEAP*PYTSGP
Trigger: TGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGACC...CCTCCTAGGCTGGAAGCCATGGTCCCGAAGTGTAGGGCAAGGGTGCCTCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS GCA 90 bp GGTAGTGGAGGCACTGGCCTCATTCACATCTGCCAGGCTTGCGTCTaGCAGGCTGGCAGGAAGGGGACCAAACAGAGGGCAGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: GSGGTGLIHICQACV*QAGRKGTKQRAAGM
Trigger: CATCCCTGCTGCCCTCTGTTTGGTCCCCTTCCTGCCAGCCTGGCAGACGCAAGCCTGGCAGATGTGAATGAGGCCAGTGCCTCCACTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS-3UTR CAA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCCGCACCGGGCGCAGTaGGGGTTCATGGTTCCGAGA +
Preference number: 5 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKPHRAQ*GFMVPR
Trigger: TCTCGGAACCATGAACCCCAACTGCGCCCGGTGCGG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGCCGCACCGGGCGCAGTaGGGGTTCATGGTTCCGAGA +
Preference number: 5 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVPHRAQ*GFMVPR
Trigger: TCTCGGAACCATGAACCCCAACTGCGCCCGGTGCGG...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTTCGATCTGCTGCACGTaGACGATGGTGTCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGASICCT*TMVSPS
Trigger: GGACGGGGACACCATCGTCAACGTGCAGCAGATCGA...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS CCA 90 bp CAGCAGGGATGCCGCAGGGCAGGGCAAGAGCTCACGTTACTGATCTaGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: QQGCRRAGQELTLLI*SWVFLILWSSGVSA
Trigger: GGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACGTGAGCTCTTGCCCTGCCCTGCGGCATCCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS-3UTR CAA 90 bp CATACACCGCGCGGTACCGCTTCCCGCCACCACCTGGGGCGCTGCGCTGTATGGATGTTCAGTGTCATCTaGCAGGTCTCGCAATGGAAG +
Preference number: 5 (lower is better)
Translates to: HTPRGTASRHHLGRCAVWMFSVI*QVSQWK
Trigger: CTTCCATTGCGAGACCTGCAAGATGACACTGAACAT...CCATACAGCGCAGCGCCCCAGGTGGTGGCGGGAAGCGGTACCGCGCGGTGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTTTCCTCGGGAGCTCTTaGCCCGCTGCAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAFLGSS*PAAGLR
Trigger: ACGCAGACCTGCAGCGGGCAAAGAGCTCCCGAGGAA...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGTTCCTCGGGAGCTCTTaGCCCGCTGCAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVFLGSS*PAAGLR
Trigger: ACGCAGACCTGCAGCGGGCAAAGAGCTCCCGAGGAA...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTCAGCTCCAAGTCCACTaGGCATTGGGCTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAQLQVH*ALGWGG
Trigger: CCCTCCCCAGCCCAATGCCAAGTGGACTTGGAGCTG...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCAGCTCCAAGTCCACTaGGCATTGGGCTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKQLQVH*ALGWGG
Trigger: CCCTCCCCAGCCCAATGCCAAGTGGACTTGGAGCTG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS CCA 90 bp GGATGCCGCAGGGCAGGGCAAGAGCTCACGTTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCTGCCACTACG +
Preference number: 5 (lower is better)
Translates to: GCRRAGQELTLLIWS*VFLILWSSGVSATT
Trigger: CGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACGTGAGCTCTTGCCCTGCCCTGCGGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS-3UTR CAA 90 bp CCATTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGACTGGAGCTCACTCTGTaGCTTGAGGCGAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: PFQPCLPQRGPCPFHPERLELTL*LEAKVF
Trigger: GAAAACCTTCGCCTCAAGCAACAGAGTGAGCTCCAG...TCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR CAA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGTCGATCTGCTGCACGTaGACGATGGTGTCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKSICCT*TMVSPS
Trigger: GGACGGGGACACCATCGTCAACGTGCAGCAGATCGA...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGTCGATCTGCTGCACGTaGACGATGGTGTCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVSICCT*TMVSPS
Trigger: GGACGGGGACACCATCGTCAACGTGCAGCAGATCGA...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp ACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCTTGGTCCCTGCTGACTTaGTGCAGCTCCAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: TPRTDAMPWNVLKTDGGAWSLLT*CSSKST
Trigger: AGTGGACTTGGAGCTGCACAAAGTCAGCAGGGACCA...AGCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp CGGGCATCGGGGAAGGTAGGGCACTCAGAGGCAGAGAAATGTAGCTCCAGATACTTAGTGGGAGGCCCTTaGGGAAGCGGGCATCGGGGA +
Preference number: 5 (lower is better)
Translates to: RASGKVGHSEAEKCSSRYLVGGP*GSGHRG
Trigger: TCCCCGATGCCCGCTTCCCAAAGGGCCTCCCACTAA...GTATCTGGAGCTACATTTCTCTGCCTCTGAGTGCCCTACCTTCCCCGATGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR CAA 90 bp TTCCAGCCCTGCCTCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAAAGCTCACTCTGTTGCTaGAGGCGAAGGTTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: FQPCLPQRGPCPFHPERKSSLCC*RRRFSG
Trigger: CCCGGAAAACCTTCGCCTCAAGCAACAGAGTGAGCT...TTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGAGGCAGGGCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR CAA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGTTCCTCGGGAGCTCTTaGCCCGCTGCAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: PSREKTKKSIKGEACQRRFLGSS*PAAGLR
Trigger: ACGCAGACCTGCAGCGGGCAAAGAGCTCCCGAGGAA...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp GAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACTGGTCCCTGCTGACTTaGTGCAGCTCCAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: EWTGHAQDGCDAVECAEDWSLLT*CSSKST
Trigger: AGTGGACTTGGAGCTGCACAAAGTCAGCAGGGACCA...GTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp TTCAGACTAACTCTTGCGCCCACAGTGCCCTGGGCAGTCCTAACATCCCTTTGTGAGCCTGCCAGGAGCTaGGTAAGGGTGGCTCAGCGG +
Preference number: 5 (lower is better)
Translates to: FRLTLAPTVPWAVLTSLCEPARS*VRVAQR
Trigger: CCGCTGAGCCACCCTTACCAAGCTCCTGGCAGGCTC...ACAAAGGGATGTTAGGACTGCCCAGGGCACTGTGGGCGCAAGAGTTAGTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS TCA 90 bp TCATCACACACAACAGAGGGTGGGTGCAAAGGTCAGGAGAATCCATaGGCTGTGTCCAAGCCTTCCCGAAGGACCCCCTGCCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: SSHTTEGGCKGQENP*AVSKPSRRTPCLWP
Trigger: AGGCCAGAGGCAGGGGGTCCTTCGGGAAGGCTTGGACACAGCTCATGGATTCTCCTGACCTTTGCACCCACCCTCTGTTGTGTGTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CAA 90 bp AAGACAGATGGGGGCGCTGCGGGTTCAGATGGCCTCCACGTAGTTGGCCGGCAGCTGAAACCTTTGCCCTaGTTCTTCTCAAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: KTDGGAAGSDGLHVVGRQLKPLP*FFSNSS
Trigger: GGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAG...CTGCCGGCCAACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAACAGCTCCAAGTCCACTaGGCATTGGGCTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: RPMPVPSREKTKKSIKGEQLQVH*ALGWGG
Trigger: CCCTCCCCAGCCCAATGCCAAGTGGACTTGGAGCTG...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTTGGTCCCTGCTGACTTaGTGCAGCTCCAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: TEEWTGHAQDGCDAVECAWSLLT*CSSKST
Trigger: AGTGGACTTGGAGCTGCACAAAGTCAGCAGGGACCA...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGCTGGAGCTCACTCTGTaGCTTGAGGCGAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVLELTL*LEAKVF
Trigger: GAAAACCTTCGCCTCAAGCAACAGAGTGAGCTCCAG...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR CAA 90 bp CACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGACAGATGGGGGCGCACTACGCTGAAACCTTaGCCCTTGTTCTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HAQDGCDAVECAEDRWGRTTLKP*PLFFSN
Trigger: GTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGT...GCGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAATCGATCTGCTGCACGTaGACGATGGTGTCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: PREAHARSIQRENQEVDQSICCT*TMVSPS
Trigger: GGACGGGGACACCATCGTCAACGTGCAGCAGATCGA...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp AGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAATCGATCTGCTGCACGTaGACGATGGTGTCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: RPMPVPSREKTKKSIKGESICCT*TMVSPS
Trigger: GGACGGGGACACCATCGTCAACGTGCAGCAGATCGA...TTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp TCCCCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATAGCTCACTCTGTTGCTaGAGGCGAAGGTTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: SPREAHARSIQRENQEVDSSLCC*RRRFSG
Trigger: CCCGGAAAACCTTCGCCTCAAGCAACAGAGTGAGCT...ATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS CCA 90 bp AGCATGCTTTATGCCAGAACTTATCCAGACAGTTCACCTTCTCCGTaGGATACACGATCTTGCCGCACCGGGCGCAGTTGGGGTTCATGG +
Preference number: 5 (lower is better)
Translates to: SMLYARTYPDSSPSP*DTRSCRTGRSWGSW
Trigger: CCATGAACCCCAACTGCGCCCGGTGCGGCAAGATCGTGTATCCCACGGAGAAGGTGAACTGTCTGGATAAGTTCTGGCATAAAGCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000584106.1
ENST00000585841.5
CDS CCA 90 bp CAAGAGCTCACGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCCACTACGCTGAAACCTTTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QELTLLIWSWVFLIL*SSGVSATTLKPLPL
Trigger: CAAGGGCAAAGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACGTGAGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS-3UTR CAA 90 bp AAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTGAAGCTGAAACCTTTGCCCTaGTTCTTCTCAAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: KNGRVTPRTDAMPWNVLKLKPLP*FFSNSS
Trigger: GGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAG...CTTCAGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTCTGAAACCTTTGCCCTaGTTCTTCTCAAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: TEEWTGHAQDGCDAVECALKPLP*FFSNSS
Trigger: GGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAG...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp AGAGCAGCGCCCAGTGCTGGAAGGCCCCATGCAGAAAGTTGCCTTGTGTGTTCCCTAACATCCCTTTGTTaGTGTGCCCAGAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: RAAPSAGRPHAESCLVCSLTSLC*CAQSIR
Trigger: TCTGATGCTCTGGGCACACAAACAAAGGGATGTTAG...GGAACACACAAGGCAACTTTCTGCATGGGGCCTTCCAGCACTGGGCGCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS TCA 90 bp AGAGGCCTCTCAGCCTGGATCCGAGGCTCCAAGGCAGGGTCATCTTaGTCTTCCCTTGCCTACCTGCAACCCACTCTAAAGAAAGGTAAA +
Preference number: 5 (lower is better)
Translates to: RGLSAWIRGSKAGSS*SSLAYLQPTLKKGK
Trigger: TTTACCTTTCTTTAGAGTGGGTTGCAGGTAGGCAAGGGAAGATCAAGATGACCCTGCCTTGGAGCCTCGGATCCAGGCTGAGAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419929.1
CDS-3UTR CAA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAACTGGAGCTCACTCTGTaGCTTGAGGCGAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: PREAHARSIQRENQEVDQLELTL*LEAKVF
Trigger: GAAAACCTTCGCCTCAAGCAACAGAGTGAGCTCCAG...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000435347.7
ENST00000443937.7
CDS-3UTR CAA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTACTACGCTGAAACCTTaGCCCTTGTTCTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TEEWTGHAQDGCDAVECATTLKP*PLFFSN
Trigger: GTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGT...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp GAAACCTTTGCCCTTGTTCTTCTCAAACTCCTCCTTGTAGCGCACCTAGCACCAAGCTCACTCTGTTGCTaGAGGCGAAGGTTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: ETFALVLLKLLLVAHLAPSSLCC*RRRFSG
Trigger: CCCGGAAAACCTTCGCCTCAAGCAACAGAGTGAGCT...TGGTGCTAGGTGCGCTACAAGGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443937.7
CDS-3UTR CAA 90 bp AACAGAGACACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGTCACCACTGGGCTTCTaGTTATTCTTAGTATTGGTC +
Preference number: 5 (lower is better)
Translates to: NRDTEEWTGHAQDGCDAVSPLGF*LFLVLV
Trigger: GACCAATACTAAGAATAACAAGAAGCCCAGTGGTGA...CACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp ACTGAAGAATGGACGGGTCACGCCCAGGACGGATGCGATGCCGTGGAATGTGCTTCACCACTGGGCTTCTaGTTATTCTTAGTATTGGTC +
Preference number: 5 (lower is better)
Translates to: TEEWTGHAQDGCDAVECASPLGF*LFLVLV
Trigger: GACCAATACTAAGAATAACAAGAAGCCCAGTGGTGA...AGCACATTCCACGGCATCGCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp TGGACCCTACACATCCAGGACAGACCCATTGAGGAGGGAGGGACTGGCTGGGCTTTTCTTATTGTTTTCTaGTTTGTCCCCCTGACTGGA +
Preference number: 5 (lower is better)
Translates to: WTLHIQDRPIEEGGTGWAFLIVF*FVPLTG
Trigger: TCCAGTCAGGGGGACAAACAAGAAAACAATAAGAAA...AGCCCAGCCAGTCCCTCCCTCCTCAATGGGTCTGTCCTGGATGTGTAGGGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS CCA 90 bp TCTGCTCACAAGGCTGAGATCCTTATCATCACACACAACAGAGGGTaGGTGCAAAGGTCAGGAGAATCCATGAGCTGTGTCCAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SAHKAEILIITHNRG*VQRSGESMSCVQAF
Trigger: GAAGGCTTGGACACAGCTCATGGATTCTCCTGACCTTTGCACCCACCCTCTGTTGTGTGTGATGATAAGGATCTCAGCCTTGTGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS-3UTR CAA 90 bp CGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGATGTTCAGTGTCATCTaGCAGGTCTCGCAATGGAAG +
Preference number: 5 (lower is better)
Translates to: RSIQRENQEVDQGGSLPEMFSVI*QVSQWK
Trigger: CTTCCATTGCGAGACCTGCAAGATGACACTGAACAT...CTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp CCCAGAGAGGCCCATGCCCGTTCCATCCAGAGAGAAAACCAAGAAGTCGATCAACTGAAACCTTTGCCCTaGTTCTTCTCAAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: PREAHARSIQRENQEVDQLKPLP*FFSNSS
Trigger: GGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAG...TTGATCGACTTCTTGGTTTTCTCTCTGGATGGAACGGGCATGGGCCTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp CCATCCAGAGAGAAAACCAAGAAGTCGATCAAGGGGGAAGCCTGCCAGAGGAGGTCACCACTGGGCTTCTaGTTATTCTTAGTATTGGTC +
Preference number: 5 (lower is better)
Translates to: PSREKTKKSIKGEACQRRSPLGF*LFLVLV
Trigger: GACCAATACTAAGAATAACAAGAAGCCCAGTGGTGA...CCTCCTCTGGCAGGCTTCCCCCTTGATCGACTTCTTGGTTTTCTCTCTGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp TATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCACTACGCTGAAACCTTaGCCCTTGTTCTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: YVTDLVLGLLDSLELGRVTTLKP*PLFFSN
Trigger: GTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGT...GACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS GCA 90 bp GCTTCTTCTCGTAGCCCTTGTAGTTCTTCATGTTCAGTGTCATCTTaGAGGTCTCGCAATGGAAGCATGCTTTATGCCAGAACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: ASSRSPCSSSCSVSS*RSRNGSMLYARTLL
Trigger: CAGCAGAGTTCTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAACATGAAGAACTACAAGGGCTACGAGAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419929.1
CDS-3UTR CAA 90 bp TATTTTATGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGCATGTTCAGTGTCATCTaGCAGGTCTCGCAATGGAAG +
Preference number: 5 (lower is better)
Translates to: YFMLLIWSWVFLILWSSGMFSVI*QVSQWK
Trigger: CTTCCATTGCGAGACCTGCAAGATGACACTGAACAT...GCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACATAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp CCCATGCGGCTCTTCTCAAACTCCTCATGGTATTTTATGTTACTGATCTGGTCCCTGAAACCTTTGCCCTaGTTCTTCTCAAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: PMRLFSNSSWYFMLLIWSLKPLP*FFSNSS
Trigger: GGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAG...GGACCAGATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCGCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS GCA 90 bp GCTTCTTCTCGTAGCCCTTGTAGTTCTTCATGTTCAGTGTCATCTTaGAGGTCTCGCAATGGAAGCATGCTTTATGCCAGAACTTATCCA +
Preference number: 5 (lower is better)
Translates to: ASSRSPCSSSCSVSS*RSRNGSMLYARTYP
Trigger: TGGATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAACATGAAGAACTACAAGGGCTACGAGAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000584106.1
ENST00000585841.5
CDS-3UTR CAA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATATGTTCAGTGTCATCTaGCAGGTCTCGCAATGGAAG +
Preference number: 5 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDMFSVI*QVSQWK
Trigger: CTTCCATTGCGAGACCTGCAAGATGACACTGAACAT...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS-3UTR CAA 90 bp CTAGGGCCCATGCGGCTCTTCTCAAACTCCTCATGGTATTTTATGTTACTGATCACTACGCTGAAACCTTaGCCCTTGTTCTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LGPMRLFSNSSWYFMLLITTLKP*PLFFSN
Trigger: GTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGT...GATCAGTAACATAAAATACCATGAGGAGTTTGAGAAGAGCCGCATGGGCCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443937.7
ENST00000585841.5
CDS-3UTR CAA 90 bp AAAAAGATGAACTGGCGGCTTCACACACTCACACACATACACATACACACGGATACTACGCTGAAACCTTaGCCCTTGTTCTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KKMNWRLHTLTHIHIHTDTTLKP*PLFFSN
Trigger: GTTTGAGAAGAACAAGGGCAAAGGTTTCAGCGTAGT...ATCCGTGTGTATGTGTATGTGTGTGAGTGTGTGAAGCCGCCAGTTCATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
CDS GCA 72 bp GTTCCCCGAGGCGAGCTGGCGGGAGGCGGCCGCGGCTaGAACTACACAGGCAGCAGCGACGGCGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: VPRGELAGGGRG*NYTGSSDGGWS
Trigger: GCTCCAGCCGCCGTCGCTGCTGCCTGTGTAGTTGCAGCCGCGGCCGCCTCCCGCCAGCTCGCCTCGGGGAAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000443937.7
ENST00000584106.1
ENST00000585841.5
CDS CCA 72 bp CGCGGCTGCAACTACACAGGCAGCAGCGACGGCGGCTaGAGCTGGGGAACTGGCCTCCGCCTCCGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: RGCNYTGSSDGG*SWGTGLRLRPP
Trigger: AGGAGGGCGGAGGCGGAGGCCAGTTCCCCAGCTCCAGCCGCCGTCGCTGCTGCCTGTGTAGTTGCAGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433206.6
ENST00000585841.5
CDS GCA 72 bp TCTCACAGAGCATGCCCTCCTGGGAACTTCGTCCTATaGTTGGGCACGCCCTGGCCCGGCCCCACAGGAGGA +
Preference number: 6 (lower is better)
Translates to: SHRACPPGNFVL*LGTPWPGPTGG
Trigger: TCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCTGTGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS CCA 72 bp CCTCCTGGGAACTTCGTCCTATGCTTGGGCACGCCCTaGCCCGGCCCCACAGGAGGACTTCAGTGTCCACCA +
Preference number: 6 (lower is better)
Translates to: PPGNFVLCLGTP*PGPTGGLQCPP
Trigger: TGGTGGACACTGAAGTCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS CCA 72 bp ACAGAGCATGCCCTCCTGGGAACTTCGTCCTATGCTTaGGCACGCCCTGGCCCGGCCCCACAGGAGGACTTC +
Preference number: 6 (lower is better)
Translates to: TEHALLGTSSYA*ARPGPAPQEDF
Trigger: GAAGTCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS CAA 72 bp CACAGAGCATGCCCTCCTGGGAACTTCGTCCTATGCTaGGGCACGCCCTGGCCCGGCCCCACAGGAGGACTT +
Preference number: 6 (lower is better)
Translates to: HRACPPGNFVLC*GTPWPGPTGGL
Trigger: AAGTCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS GCA 72 bp GGGAGGGGCAGGAGCCTCTGGGCTTCTCACAGAGCATaGCCTCCTGGGAACTTCGTCCTATGCTTGGGCACG +
Preference number: 6 (lower is better)
Translates to: GRGRSLWASHRA*PPGNFVLCLGT
Trigger: CGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCTGTGAGAAGCCCAGAGGCTCCTGCCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS CAA 90 bp TGGGCTTCTCACAGAGCATGCCCTCCTGGGAACTTCGTCCTATGCTaGGGCACGCCCTGGCCCGGCCCCACAGGAGGACTTCAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: WASHRACPPGNFVLC*GTPWPGPTGGLQCP
Trigger: TGGACACTGAAGTCCTCCTGTGGGGCCGGGCCAGGGCGTGCCCAAGCATAGGACGAAGTTCCCAGGAGGGCATGCTCTGTGAGAAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581485.1
CDS GCA 72 bp GGCACTGGCCTCATTCACATCTGCCAGGCTTGCGTCTaGCAGGCTGGCAGGAAGGGGACCAAACAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: GTGLIHICQACV*QAGRKGTKQRA
Trigger: TGCCCTCTGTTTGGTCCCCTTCCTGCCAGCCTGGCAGACGCAAGCCTGGCAGATGTGAATGAGGCCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS CCA 72 bp CCTCATTCACATCTGCCAGGCTTGCGTCTGCCAGGCTaGCAGGAAGGGGACCAAACAGAGGGCAGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: PHSHLPGLRLPG*QEGDQTEGSRD
Trigger: ATCCCTGCTGCCCTCTGTTTGGTCCCCTTCCTGCCAGCCTGGCAGACGCAAGCCTGGCAGATGTGAATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS CCA 72 bp TGCCGCAGGGCAGGGCAAGAGCTCACGTTACTGATCTaGTCCTGGGTCTTCTTGATTCTCTGGAGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: CRRAGQELTLLI*SWVFLILWSSG
Trigger: GCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACGTGAGCTCTTGCCCTGCCCTGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS TCA 72 bp ACAACAGAGGGTGGGTGCAAAGGTCAGGAGAATCCATaGGCTGTGTCCAAGCCTTCCCGAAGGACCCCCTGC +
Preference number: 6 (lower is better)
Translates to: TTEGGCKGQENP*AVSKPSRRTPC
Trigger: GCAGGGGGTCCTTCGGGAAGGCTTGGACACAGCTCATGGATTCTCCTGACCTTTGCACCCACCCTCTGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579123.1
CDS CAA 90 bp AGGGCAGGGCAAGAGCTCACGTTACTGATCTGGTCCTGGGTCTTCTaGATTCTCTGGAGCTCGGGCGTGTCTGCCACTACGCTGAAACCT +
Preference number: 6 (lower is better)
Translates to: RAGQELTLLIWSWVF*ILWSSGVSATTLKP
Trigger: AGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACGTGAGCTCTTGCCCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS CCA 72 bp AGGGCAGGGCAAGAGCTCACGTTACTGATCTGGTCCTaGGTCTTCTTGATTCTCTGGAGCTCGGGCGTGTCT +
Preference number: 6 (lower is better)
Translates to: RAGQELTLLIWS*VFLILWSSGVS
Trigger: AGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACGTGAGCTCTTGCCCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS CCA 72 bp TATGCCAGAACTTATCCAGACAGTTCACCTTCTCCGTaGGATACACGATCTTGCCGCACCGGGCGCAGTTGG +
Preference number: 6 (lower is better)
Translates to: YARTYPDSSPSP*DTRSCRTGRSW
Trigger: CCAACTGCGCCCGGTGCGGCAAGATCGTGTATCCCACGGAGAAGGTGAACTGTCTGGATAAGTTCTGGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000584106.1
ENST00000585841.5
CDS CAA 72 bp CTCAGCCTGGATCCGAGGCTCCAAGGCAGGGTCATCTaGATCTTCCCTTGCCTACCTGCAACCCACTCTAAA +
Preference number: 6 (lower is better)
Translates to: LSLDPRLQGRVI*IFPCLPATHSK
Trigger: TTTAGAGTGGGTTGCAGGTAGGCAAGGGAAGATCAAGATGACCCTGCCTTGGAGCCTCGGATCCAGGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419929.1
CDS CCA 72 bp ACGTTACTGATCTGGTCCTGGGTCTTCTTGATTCTCTaGAGCTCGGGCGTGTCTGCCACTACGCTGAAACCT +
Preference number: 6 (lower is better)
Translates to: TLLIWSWVFLIL*SSGVSATTLKP
Trigger: AGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS GCA 72 bp GTTCAGTGTCATCTTGCAGGTCTCGCAATGGAAGCATaGTTTATGCCAGAACTCTGCTGCCTGTTAGAGGCC +
Preference number: 6 (lower is better)
Translates to: VQCHLAGLAMEA*FMPELCCLLEA
Trigger: GGCCTCTAACAGGCAGCAGAGTTCTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419929.1
CDS CCA 72 bp ACAGTCCCTTCAAGAAGAAAATGCTATGCGTGCTGGTaGTCTGGGGGTACACAGAGAAGAGGCATCTGGGAA +
Preference number: 6 (lower is better)
Translates to: TVPSRRKCYACW*SGGTQRRGIWE
Trigger: TTCCCAGATGCCTCTTCTCTGTGTACCCCCAGACCACCAGCACGCATAGCATTTTCTTCTTGAAGGGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584106.1
CDS GCA 72 bp CGTAGCCCTTGTAGTTCTTCATGTTCAGTGTCATCTTaGAGGTCTCGCAATGGAAGCATGCTTTATGCCAGA +
Preference number: 6 (lower is better)
Translates to: RSPCSSSCSVSS*RSRNGSMLYAR
Trigger: TCTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAACATGAAGAACTACAAGGGCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318008.11
ENST00000419929.1
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000584106.1
ENST00000585841.5
CDS CCA 72 bp TTCTTCATGTTCAGTGTCATCTTGCAGGTCTCGCAATaGAAGCATGCTTTATGCCAGAACTCTGCTGCCTGT +
Preference number: 6 (lower is better)
Translates to: FFMFSVILQVSQ*KHALCQNSAAC
Trigger: ACAGGCAGCAGAGTTCTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAACATGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419929.1
CDS CCA 72 bp TTCTTCATGTTCAGTGTCATCTTGCAGGTCTCGCAATaGAAGCATGCTTTATGCCAGAACTTATCCAGACAG +
Preference number: 6 (lower is better)
Translates to: FFMFSVILQVSQ*KHALCQNLSRQ
Trigger: CTGTCTGGATAAGTTCTGGCATAAAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAACATGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318008.11
ENST00000433206.6
ENST00000435347.7
ENST00000443937.7
ENST00000584106.1
ENST00000585841.5