RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAS1L (Homo sapiens)

Ensembl gene IDs: ENSG00000001497

Ensembl transcript IDs: ENST00000374804.9, ENST00000374807.9, ENST00000374811.8, ENST00000469091.1, ENST00000484069.1, ENST00000676986.1, ENST00000677056.1, ENST00000677087.1, ENST00000677154.1, ENST00000677834.1, ENST00000677969.1, ENST00000677986.1, ENST00000678074.1, ENST00000678173.1, ENST00000678547.1, ENST00000678570.1, ENST00000678602.1, ENST00000678705.1, ENST00000678823.1, ENST00000678848.1, ENST00000678956.1, ENST00000679056.1, ENST00000679116.1, ENST00000679261.1, ENST00000679277.1

Found 1388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCTGGACCTCAGGTCGAGGGGGCCCTGCCGGATGCCTCCATGTaGTCGAGGAAGCTCTGCAGTGGCAGCAATCCGCAGGGCTATGTG +
Preference number: 1 (lower is better)
Translates to: RAGPQVEGALPDASM*SRKLCSGSNPQGYV
Trigger: CACATAGCCCTGCGGATTGCTGCCACTGCAGAGCTTCCTCGAGCACATGGAGGCATCCGGCAGGGCCCCCTCGACCTGAGGTCCAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678956.1
3UTR CCA 90 bp AGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTaGCAGAGGTGGCTCCAGAGCACAGGTGGAGGAGCAGGCTTTGAG +
Preference number: 1 (lower is better)
Translates to: SQQSKVEAGVRPQRC*QRWLQSTGGGAGFE
Trigger: CTCAAAGCCTGCTCCTCCACCTGTGCTCTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 90 bp AAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATaGTGGCAGAGGTGGCTCCAGAGCACAGGTGGAGGAGCAGGCTTT +
Preference number: 1 (lower is better)
Translates to: KSQQSKVEAGVRPQR*WQRWLQSTGGGAGF
Trigger: AAAGCCTGCTCCTCCACCTGTGCTCTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 90 bp CATGCAGCTGCCCCTGGCTCCAGAGAAGGCCCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGCCACTGCCGACACCACAGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: HAAAPGSREGPRSCC*CCCCSCHCRHHSSG
Trigger: GCCTGAGCTGTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 90 bp GCCCATGCAGCTGCCCCTGGCTCCAGAGAAGGCCCTCGAAGTTGCTaGTGCTGCTGTTGCTGCAGTTGCCACTGCCGACACCACAGCTCA +
Preference number: 1 (lower is better)
Translates to: AHAAAPGSREGPRSC*CCCCCSCHCRHHSS
Trigger: TGAGCTGTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 90 bp TCAAGAGACTTACATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: SRDLHPKELGAGPAR*AQAGLNHPGPVKGG
Trigger: GCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTAAGTCTCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR GCA 90 bp GAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATGCCAAGTGAGCCGCTGTTACTGCCG +
Preference number: 1 (lower is better)
Translates to: EQMRSSFSCSSSGRP*PMALKMPSEPLLLP
Trigger: CGGCAGTAACAGCGGCTCACTTGGCATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 90 bp ACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCATaGAGCTGCCCCTGGCTCCAGAGAAGGCCCTCGAAGTTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: TRDGHQKSCRPVLSP*SCPWLQRRPSKLLL
Trigger: CAGCAGCAACTTCGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 90 bp CCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGAAAATCGGCGAGCATTCCGTCCAGT +
Preference number: 1 (lower is better)
Translates to: PVKGGGAVEQPPAPS*FPLACRKSASIPSS
Trigger: ACTGGACGGAATGCTCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR GCA 90 bp CACGGCTGGATGAACACTTGCACCAGGGATGGCCATCAGAAGAGCTaGAGGCCAGTTTTGAGCCCATGCAGCTGCCCCTGGCTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: HGWMNTCTRDGHQKS*RPVLSPCSCPWLQR
Trigger: TCTCTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTaGACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGC +
Preference number: 1 (lower is better)
Translates to: VLGGGLLPWHGWMNT*TRDGHQKSCRPVLS
Trigger: GCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 90 bp TGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATaGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCATGCAGCTG +
Preference number: 1 (lower is better)
Translates to: WAVALARLDEHLHQG*PSEELQASFEPMQL
Trigger: CAGCTGCATGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GASVVLGGGLLPWHG*MNTCTRDGHQKSCR
Trigger: CCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 90 bp GGAGCAGTTGAACAGCCTCCAGCCCCTTCTTGCTTCCCACTGGCCTaGAGAAAATCGGCGAGCATTCCGTCCAGTCTTGGTGTTGGCCAC +
Preference number: 1 (lower is better)
Translates to: GAVEQPPAPSCFPLA*RKSASIPSSLGVGH
Trigger: GTGGCCAACACCAAGACTGGACGGAATGCTCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGGCTGTTCAACTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR CCA 90 bp GAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGAGCATTCCGTCCAGTCTTGGTGTTG +
Preference number: 1 (lower is better)
Translates to: EAEQLNSLQPLLASH*PAENRRAFRPVLVL
Trigger: CAACACCAAGACTGGACGGAATGCTCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR CCA 90 bp TACCGGATGGAATTCAAGAGACTTACATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCC +
Preference number: 1 (lower is better)
Translates to: YRMEFKRLTSEGVGG*PSKVSPSRTQPSGA
Trigger: GGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTAAGTCTCTTGAATTCCATCCGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 90 bp GGCAGTGTGGCCCTGAGGCTTGAAGGGCCTCACCCTCTTACCGGATaGAATTCAAGAGACTTACATCCGAAGGAGTTGGGGGCTGGCCCA +
Preference number: 1 (lower is better)
Translates to: GSVALRLEGPHPLTG*NSRDLHPKELGAGP
Trigger: TGGGCCAGCCCCCAACTCCTTCGGATGTAAGTCTCTTGAATTCCATCCGGTAAGAGGGTGAGGCCCTTCAAGCCTCAGGGCCACACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR TCA 90 bp GTGAAGTTCTGGGAGTGCAGGCCCCTGAGCAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACGTTT +
Preference number: 1 (lower is better)
Translates to: VKFWECRPLSRGCQN*ENGFGTRTSFKSTF
Trigger: AAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR GCA 90 bp CCTCCTGACAGTTGGGGTCCTCCTCAGTGTCAGTCTCAACATGGCTaGAACTGGGGATCCTTCCGGAGTCTCTTCCTTGGCATCTGGCTC +
Preference number: 1 (lower is better)
Translates to: PPDSWGPPQCQSQHG*NWGSFRSLFLGIWL
Trigger: GAGCCAGATGCCAAGGAAGAGACTCCGGAAGGATCCCCAGTTGCAGCCATGTTGAGACTGACACTGAGGAGGACCCCAACTGTCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTaGGTTGGGAGAAGATCTCTGTGGTCCAGACTTCTCCGAGACCAG +
Preference number: 1 (lower is better)
Translates to: EPLLLPACVASLWYA*VGRRSLWSRLLRDQ
Trigger: CTGGTCTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR CCA 90 bp CAGAGCCCTCCTGCACCAGGCTGTTTTCTCCACTCTGGGTATAAATaGAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: QSPPAPGCFLHSGYK*NRCAAASPAPRLAG
Trigger: GCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATACCCAGAGTGGAGAAAACAGCCTGGTGCAGGAGGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 90 bp TCTGAGCTAACCTGCCATGCAGAGCCCTGCAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCT +
Preference number: 1 (lower is better)
Translates to: SELTCHAEPCKAPLF*ARSLAFSAVGDSCP
Trigger: AGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 90 bp TTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACTTGCACCAGGGATGGCCATCAGAAG +
Preference number: 1 (lower is better)
Translates to: LSQGASVVLGGGLLP*HGWMNTCTRDGHQK
Trigger: CTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 90 bp TGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTaGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCAC +
Preference number: 1 (lower is better)
Translates to: CVASLWYAWVGRRSL*SRLLRDQQLPLCRH
Trigger: GTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR CCA 90 bp GCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTaGGAGAAGATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCT +
Preference number: 1 (lower is better)
Translates to: AVTAGMCRIPLVCLG*EKISVVQTSPRPAA
Trigger: AGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR TCA 90 bp GCACAGGCTGGTCCAAAAGATACATGGTGTCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGGTCTGACCTGGCATTCGGCCTAGGG +
Preference number: 1 (lower is better)
Translates to: AQAGPKDTWCHNSPA*ALLGPRSDLAFGLG
Trigger: CCCTAGGCCGAATGCCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTTTTGGACCAGCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 90 bp ACCCTCTTACCGGATGGAATTCAAGAGACTTACATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCATC +
Preference number: 1 (lower is better)
Translates to: TLLPDGIQETYIRRS*GLAQQGEPKQDSTI
Trigger: GATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTAAGTCTCTTGAATTCCATCCGGTAAGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 90 bp ATGCCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGACTTCTC +
Preference number: 1 (lower is better)
Translates to: MPSEPLLLPACVASL*YAWVGRRSLWSRLL
Trigger: GAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 90 bp TACCCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGACTTCTC +
Preference number: 1 (lower is better)
Translates to: YPSEPLLLPACVASL*YAWVGRRSLWSRLL
Trigger: GAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CCA 90 bp TTGGTGGTATCCAAATCGGCTGTTGATTTTGGCATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCATC +
Preference number: 1 (lower is better)
Translates to: LVVSKSAVDFGIRRS*GLAQQGEPKQDSTI
Trigger: GATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 90 bp CAGGATCTGTGCACAAGAAATCGTACCCAAGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAA +
Preference number: 1 (lower is better)
Translates to: QDLCTRNRTQVSRCY*RHVSHPSGMLGLGE
Trigger: TTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGGTACGATTTCTTGTGCACAGATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CCA 90 bp GACAGTTGGGGTCCTCCTCAGTGTCAGTCTCAACATGGCTGCAACTaGGGATCCTTCCGGAGTCTCTTCCTTGGCATCTGGCTCATGATA +
Preference number: 1 (lower is better)
Translates to: DSWGPPQCQSQHGCN*GSFRSLFLGIWLMI
Trigger: TATCATGAGCCAGATGCCAAGGAAGAGACTCCGGAAGGATCCCCAGTTGCAGCCATGTTGAGACTGACACTGAGGAGGACCCCAACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR TCA 90 bp GGCCCTTCTAACTCAGTCATTCTAGGGCAGTGTGGCCCTGAGGCTTaGAGGGCCTCACCCTCTTACCGGATGGAATTCAAGAGACTTACA +
Preference number: 1 (lower is better)
Translates to: GPSNSVILGQCGPEA*RASPSYRMEFKRLT
Trigger: TGTAAGTCTCTTGAATTCCATCCGGTAAGAGGGTGAGGCCCTTCAAGCCTCAGGGCCACACTGCCCTAGAATGACTGAGTTAGAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR TCA 90 bp GAGATCTGGATGCAGGCAAAGAGCAGATGTCATGGGATGCAAGGGTaGGAACTAGAAGGACGAGAAGTGGTGGTCACCGAGTGGGATGCT +
Preference number: 1 (lower is better)
Translates to: EIWMQAKSRCHGMQG*ELEGREVVVTEWDA
Trigger: AGCATCCCACTCGGTGACCACCACTTCTCGTCCTTCTAGTTCTCACCCTTGCATCCCATGACATCTGCTCTTTGCCTGCATCCAGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR TCA 90 bp TTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTaGGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGC +
Preference number: 1 (lower is better)
Translates to: LSGKGRICAQEIVPK*AAVTAGMCRIPLVC
Trigger: GCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR TCA 90 bp CTAGAAGGACGAGAAGTGGTGGTCACCGAGTGGGATGCTGGGATGTaGGCTTTCAGAGGTGGAATAGCTCCGAATGATGGAAATGGGTTG +
Preference number: 1 (lower is better)
Translates to: LEGREVVVTEWDAGM*AFRGGIAPNDGNGL
Trigger: CAACCCATTTCCATCATTCGGAGCTATTCCACCTCTGAAAGCTCACATCCCAGCATCCCACTCGGTGACCACCACTTCTCGTCCTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR TCA 90 bp CAAAGGATGGGCAAAGCTGAAGGTGCTGATGATGAGTGGCCGAACTaGGCAACCACAGACAGGATAGAGAGGAAGCAAGGTCAAGGGATG +
Preference number: 1 (lower is better)
Translates to: QRMGKAEGADDEWPN*ATTDRIERKQGQGM
Trigger: CATCCCTTGACCTTGCTTCCTCTCTATCCTGTCTGTGGTTGCTCAGTTCGGCCACTCATCATCAGCACCTTCAGCTTTGCCCATCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR GCA 90 bp CTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTaGCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGC +
Preference number: 1 (lower is better)
Translates to: LETLTHPGPFGSPPN*PPIHITSSLEHTSG
Trigger: GCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR GCA 90 bp AGATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTaGAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCA +
Preference number: 1 (lower is better)
Translates to: RSLWSRLLRDQQLPL*RHLGLESTLKATYP
Trigger: TGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CCA 90 bp TTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTaGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGG +
Preference number: 1 (lower is better)
Translates to: LVLLPIAHPSTSLLV*STHLAMWLFSSNSW
Trigger: CCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CCA 90 bp AGGATAGAGAGGAAGCAAGGTCAAGGGATGCAGGAAATGGAGGGATaGAGATCTGGATGCAGGCAAAGAGCAGATGTCATGGGATGCAAG +
Preference number: 1 (lower is better)
Translates to: RIERKQGQGMQEMEG*RSGCRQRADVMGCK
Trigger: CTTGCATCCCATGACATCTGCTCTTTGCCTGCATCCAGATCTCCATCCCTCCATTTCCTGCATCCCTTGACCTTGCTTCCTCTCTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 90 bp GGAGACACTAAGGGAAGTAGACACGGCAACACAAAACCTCAGATTTaGGAAGTATTCGAGAGTCAACAGGACAGGGTAGATGGTGCCGCC +
Preference number: 1 (lower is better)
Translates to: GDTKGSRHGNTKPQI*EVFESQQDRVDGAA
Trigger: GGCGGCACCATCTACCCTGTCCTGTTGACTCTCGAATACTTCCCAAATCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTTAGTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 90 bp GGGCCCACTGATTTGGTAATTAGGAGGTCAAAGCAACTCTGGGGGTaGATGTCAAATTGCAGCAGGTTGAGGAGTAAGAGGGTAGTGAGG +
Preference number: 1 (lower is better)
Translates to: GPTDLVIRRSKQLWG*MSNCSRLRSKRVVR
Trigger: CCTCACTACCCTCTTACTCCTCAACCTGCTGCAATTTGACATTCACCCCCAGAGTTGCTTTGACCTCCTAATTACCAAATCAGTGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 90 bp GTATTCGAGAGTCAACAGGACAGGGTAGATGGTGCCGCCACCAAGTaGGATAGGGAACAGAGGAGGAAGATCACTTTAGAGTTGAGATGG +
Preference number: 1 (lower is better)
Translates to: VFESQQDRVDGAATK*DREQRRKITLELRW
Trigger: CCATCTCAACTCTAAAGTGATCTTCCTCCTCTGTTCCCTATCTCACTTGGTGGCGGCACCATCTACCCTGTCCTGTTGACTCTCGAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 90 bp AATACCTGGGCAAACCCCCTCTGTTCTCCACTCTGTGTAACGGGGTaGTTAGGACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTG +
Preference number: 1 (lower is better)
Translates to: NTWANPLCSPLCVTG*LGLDSLLIWERQDL
Trigger: CAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGTCCTAATCACCCCGTTACACAGAGTGGAGAACAGAGGGGGTTTGCCCAGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676986.1
ENST00000678823.1
3UTR GCA 90 bp GACTCAGGGCCTTTTTGCAATGAGAATCCACCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTACATCTGACTCCGTACTTTTCCCAT +
Preference number: 1 (lower is better)
Translates to: DSGPFCNENPPLRCL*CLHRPLHLTPYFSH
Trigger: ATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 90 bp CTCTTCCTTGGCATCTGGCTCATGATAAGGTTTCAGGTGTCTTGGTaGTATCCAAATCGGCTGTTGATTTTGGCATCCGAAGGAGTTGGG +
Preference number: 1 (lower is better)
Translates to: LFLGIWLMIRFQVSW*YPNRLLILASEGVG
Trigger: CCCAACTCCTTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACCTTATCATGAGCCAGATGCCAAGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 90 bp CTTTATGACTCAGGGCCTTTTTGCAATGAGAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGGCCTTTACATCTGACTCCGTACTTT +
Preference number: 1 (lower is better)
Translates to: LYDSGPFCNENPPLR*LCCLHRPLHLTPYF
Trigger: AAAGTACGGAGTCAGATGTAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTCATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR TCA 90 bp TCTCCATCGGCCTTTACATCTGACTCCGTACTTTTCCCATCATCCTaGGGCTCTGGTTTCTGTTCTGTGATGTCATCAACAACAATGTTC +
Preference number: 1 (lower is better)
Translates to: SPSAFTSDSVLFPSS*GSGFCSVMSSTTMF
Trigger: GAACATTGTTGTTGATGACATCACAGAACAGAAACCAGAGCCTCAGGATGATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 90 bp ACTGTGCTAAGCACTCTAGGGGGATTGTCTTATCCATTCCCACACTaGACTCAGTTCAGTCAGGTCTTAAGCTGTATGATCTTAGGTAAG +
Preference number: 1 (lower is better)
Translates to: TVLSTLGGLSYPFPH*TQFSQVLSCMILGK
Trigger: CTTACCTAAGATCATACAGCTTAAGACCTGACTGAACTGAGTCCAGTGTGGGAATGGATAAGACAATCCCCCTAGAGTGCTTAGCACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 90 bp CGTTTTCTTCATATTCTATCTGCAAAGCTGCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCATCCAGAAAAGCATCCAGCACAGCCT +
Preference number: 1 (lower is better)
Translates to: RFLHILSAKLPTVQM*GQGSHHPEKHPAQP
Trigger: AGGCTGTGCTGGATGCTTTTCTGGATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 90 bp TATGGCCATTATGGACATGTTACATTGCTGCAGAGATTGTATTTATaGCCAGTTTTGGGGCCAGTTTATGGCCAGACTTTGGGAGGCTTG +
Preference number: 1 (lower is better)
Translates to: YGHYGHVTLLQRLYL*PVLGPVYGQTLGGL
Trigger: CAAGCCTCCCAAAGTCTGGCCATAAACTGGCCCCAAAACTGGCCATAAATACAATCTCTGCAGCAATGTAACATGTCCATAATGGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 90 bp CAACCTTCCAGCTTGGACATTATGGCCATTATGGACATGTTACATTaGTGCAGAGATTGTATTTATGGCCAGTTTTGGGGCCAGTTTATG +
Preference number: 1 (lower is better)
Translates to: QPSSLDIMAIMDMLH*CRDCIYGQFWGQFM
Trigger: CATAAACTGGCCCCAAAACTGGCCATAAATACAATCTCTGCAGCAATGTAACATGTCCATAATGGCCATAATGTCCAAGCTGGAAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 90 bp CTAAAAGTATCCCTTAAGGGAAATGAAAGGATGGGCCAAATTAATTaGAGCAGGAACACGCCCTTAAGACACAGATCGCTCAGGATTTTG +
Preference number: 1 (lower is better)
Translates to: LKVSLKGNERMGQIN*SRNTPLRHRSLRIL
Trigger: CAAAATCCTGAGCGATCTGTGTCTTAAGGGCGTGTTCCTGCTGCAATTAATTTGGCCCATCCTTTCATTTCCCTTAAGGGATACTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 90 bp CTTTGTCATGGTGAGCTACTTTTCTCAGGAGTCGGGATCCACATCTaGAGACTATACAAAGACAAACAACAGAGATTAAAAGCACAGTCA +
Preference number: 1 (lower is better)
Translates to: LCHGELLFSGVGIHI*RLYKDKQQRLKAQS
Trigger: TGACTGTGCTTTTAATCTCTGTTGTTTGTCTTTGTATAGTCTGCAGATGTGGATCCCGACTCCTGAGAAAAGTAGCTCACCATGACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp GGTAGGCCGGATCCCGCTGATCCCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: GRPDPADPQGWQFREHPLACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...GAGAGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGATCCGGCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCCTGGCACGGCTGGATaGACACTTGCACCAGGGATG +
Preference number: 2 (lower is better)
Translates to: VVSGSISCTRGWAVALARPGTAG*TLAPGM
Trigger: CATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR-3UTR TCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCAGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: GAARTERTALAPGRHSSPGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR CAA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCCTGGCTCCAGAGAAGGCCCTCGAAG +
Preference number: 2 (lower is better)
Translates to: NTCTRDGHQKSCRPV*SPCSCPWLQRRPSK
Trigger: CTTCGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 90 bp CCCAGGTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCCAT +
Preference number: 2 (lower is better)
Translates to: PRLSQGASVVLGGGL*PWHGWMNTCTRDGH
Trigger: ATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAACCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR GCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCAGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GAARTERTALAPGRHSSPVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR-3UTR CCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 2 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR-3UTR CCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTGAGCAGGCTTTGAGGTaGGGCAAGGCCACCTCATCC +
Preference number: 2 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSEQALR*GKATSS
Trigger: GGATGAGGTGGCCTTGCCCCACCTCAAAGCCTGCTC...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 90 bp TGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTaGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAG +
Preference number: 2 (lower is better)
Translates to: CTRGWAVALARLDEH*HQGWPSEELQASFE
Trigger: CTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR TCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR TCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: GAARTERTALAPGRHSSPPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR-3UTR TCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTGGTGCCGCCACCAAGTaGGATAGGGAACAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTGAATK*DREQRR
Trigger: CCTCCTCTGTTCCCTATCTCACTTGGTGGCGGCACC...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR GCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: LPACVASLWYAWVGRRSLPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTCTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 2 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR CAA 90 bp CGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTaGGGAGAAGATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RCYCRHVSHPSGMLG*GEDLCGPDFSETSS
Trigger: GCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR-3UTR GCA 90 bp TCGGCTGTTGATTTTGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTGAGCTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: SAVDFGIRRSWGLAQQGELSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...CTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGACGTCTGAGCTAACCTaGCATGCAGAGCCCTGCAAA +
Preference number: 2 (lower is better)
Translates to: VVSGSISCTRGWAVALARTSELT*HAEPCK
Trigger: TTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGACGT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678956.1
3UTR-3UTR CCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCATTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 2 (lower is better)
Translates to: GAARTERTALAPGRHSSPLPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CCA 90 bp GACCCGAAGCTGGAGCTGGCTGGCTTGACGCTCCAATACAGGCTGTCTAGTGTAATGGAGACTTCCCAATaGGGGAGGCCTCAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: DPKLELAGLTLQYRLSSVMETSQ*GRPQSP
Trigger: AGGGCTCTGAGGCCTCCCCCATTGGGAAGTCTCCAT...TACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp GGTAGGCCGGATCCCGCTGATCCCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCTGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: GRPDPADPQGWQFREHPLWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...GAGAGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGATCCGGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACCCTGCCCCATGGCTTTaGAGATGCCAAGTGAGCCGC +
Preference number: 2 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYPAPWL*RCQVSR
Trigger: GCGGCTCACTTGGCATCTTCAAAGCCATGGGGCAGG...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 2 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCLPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACT +
Preference number: 2 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSGGLLP*HGWMNT
Trigger: AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 2 (lower is better)
Translates to: SPRPAASTLQALRIGKYLSCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CCA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGACAACTGAGTTGATGTaGCTGATCCAGGCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: PSEPLLLPACVASLWYAWTTELM*LIQAVS
Trigger: GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGT...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 90 bp TGTTGCTGGGCCTTTGCTTCAGACCCGAAGCTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTGTCTAGTGTATATGGAGACTTCCCA +
Preference number: 2 (lower is better)
Translates to: CCWAFASDPKLELAG*TLQYRLSSVYGDFP
Trigger: TGGGAAGTCTCCATATACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 90 bp CCTGAACTCCTCCAACTCCCAGGTCTCTCTCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTTCTGGAGCCAATCCAGGACAAAGTA +
Preference number: 2 (lower is better)
Translates to: PELLQLPGLSQAVLQ*AAPIGLLEPIQDKV
Trigger: TACTTTGTCCTGGATTGGCTCCAGAAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTGAGAGAGACCTGGGAGTTGGAGGAGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGACCTGTGGTGGACAACTaGGTTGATGTGGCTGATCCA +
Preference number: 2 (lower is better)
Translates to: LLLPACVASLWYAWVGRRPVVDN*VDVADP
Trigger: TGGATCAGCCACATCAACTCAGTTGTCCACCACAGG...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR TCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCTCCTCTTGAAACTCTaGCTCATCCAGGCCCTTTTG +
Preference number: 2 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTLLLKL*LIQALL
Trigger: CAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGGAG...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR-3UTR TCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGG +
Preference number: 2 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYHNSPA*ALLGPR
Trigger: CCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATG...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR TCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTCTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 2 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPLVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCAAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 2 (lower is better)
Translates to: GAARTERTALAPGRHSSPRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 2 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACAGCCTCCCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 2 (lower is better)
Translates to: GAARTERTALAPGRHSSPQPPVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTG...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 2 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSLPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGACAACTGAGTTGATGTaGCTGATCCAGGCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: LPACVASLWYAWVGRRSLTTELM*LIQAVS
Trigger: GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGT...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGAAAATTCCCCTGTGGTaGACAACTGAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: VVSGSISCTRGWAVALARKIPLW*TTELMW
Trigger: CCACATCAACTCAGTTGTCCACCACAGGGGAATTTT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCAGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: LLICLQLLQALQFLALRSACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 90 bp ATAAGGTTTCAGGTGTCTTGGTGGTATCCAAATCGGCTGTTGATTTaGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: IRFQVSWWYPNRLLI*ASEGVGGWPSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCCTGTGGTGGACAACTaGGTTGATGTGGCTGATCCA +
Preference number: 2 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHPVVDN*VDVADP
Trigger: TGGATCAGCCACATCAACTCAGTTGTCCACCACAGG...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR TCA 90 bp GTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACATGGTGGAAAGTCACTGGAGTTaGGGAGCTGTAGAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: VEGSSRCSSTGWSKRYMVESHWS*GAVECQ
Trigger: CTGACACTCTACAGCTCCTCAACTCCAGTGACTTTC...CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR GCA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTAGGTCACCGAGTGGGATaGTGGGATGTGAGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: AASTLQALRIGKYLEGHLGHRVG*WDVSFQ
Trigger: CTGAAAGCTCACATCCCAGCATCCCACTCGGTGACC...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR GCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGGCCTCAGAGCCCTCCTaGACCAGGCTGTTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: KIHGVIILQHELCWVLGLASEPS*TRLFSP
Trigger: TGGAGAAAACAGCCTGGTGCAGGAGGGCTCTGAGGC...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp GATAGAGGGAAGGAGACACTAAGGGAAGTAGACACGGCAACACAAAACCTCAGAAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 2 (lower is better)
Translates to: DRGKETLREVDTATQNLRSCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...TCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTTAGTGTCTCCTTCCCTCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTTCAAAATTCCCCTGTaGTGGACAACTGAGTTGATG +
Preference number: 2 (lower is better)
Translates to: VVSGSISCTRGWAVALARFKIPL*WTTELM
Trigger: CATCAACTCAGTTGTCCACCACAGGGGAATTTTGAA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR CAA 90 bp GAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGCCTGTTaGGTGCCTAGACTTGTGTGGTGTGCTAGGGCACGGACAGCTGAT +
Preference number: 2 (lower is better)
Translates to: ESRARFNSTTFTEAC*VPRLVWCARARTAD
Trigger: ATCAGCTGTCCGTGCCCTAGCACACCACACAAGTCTAGGCACCAAACAGGCCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 90 bp GACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTaGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTC +
Preference number: 2 (lower is better)
Translates to: DQQLPLCRHLGLEST*KATYPNLSMLLLSL
Trigger: GAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CAA 90 bp AGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATaGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTG +
Preference number: 2 (lower is better)
Translates to: RLLRDQQLPLCRHLG*ESTLKATYPNLSML
Trigger: CAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CAA 90 bp CTCATGATAAGGTTTCAGGTGTCTTGGTGGTATCCAAATCGGCTGTaGATTTTGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTG +
Preference number: 2 (lower is better)
Translates to: LMIRFQVSWWYPNRL*ILASEGVGGWPSKV
Trigger: CACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACCTTATCATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTAAGTCTTGCCTTGACTaGCTTTGTCTACAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTKSCLD*LCLQSH
Trigger: GTGGCTTTGTAGACAAAGTCAGTCAAGGCAAGACTT...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR-3UTR TCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGCCATCGCACGTCTTCTaGGCTAACCTGCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: KIHGVIILQHELCWVLGLPSHVF*ANLPCR
Trigger: TCTGCATGGCAGGTTAGCTCAGAAGACGTGCGATGG...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR GCA 90 bp TCTATCCCTTCCCTGAACTCCTCCAACTCCCAGGTCTCTCTCAGGCTGTTCTCCCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 2 (lower is better)
Translates to: SIPSLNSSNSQVSLRLFSQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...GGAGAACAGCCTGAGAGAGACCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp GAAAAGCATCCAGCACAGCCTCCCGTAAACTGCTCCTCTTCGTATGATACCAGCAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 2 (lower is better)
Translates to: EKHPAQPPVNCSSSYDTSNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...GCTGGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTGTGCTGGATGCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGAAAATTCCCCTGTGGTaGACAACTGAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: LPACVASLWYAWVGRRSLKIPLW*TTELMW
Trigger: CCACATCAACTCAGTTGTCCACCACAGGGGAATTTT...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACCTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 2 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 2 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 2 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR TCA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTGGGATGCTGGGATGTaGGCTTTCAGAGGTGGAATA +
Preference number: 2 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPWDAGM*AFRGGI
Trigger: TATTCCACCTCTGAAAGCTCACATCCCAGCATCCCA...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTTCAAAATTCCCCTGTaGTGGACAACTGAGTTGATG +
Preference number: 2 (lower is better)
Translates to: PACVASLWYAWVGRRSLWFKIPL*WTTELM
Trigger: CATCAACTCAGTTGTCCACCACAGGGGAATTTTGAA...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp TCTATCCCTTCCCTGAACTCCTCCAACTCCCAGGTCTCTCTCAGGCTGTTCTCCTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 2 (lower is better)
Translates to: SIPSLNSSNSQVSLRLFSLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...GGAGAACAGCCTGAGAGAGACCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCGGCATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSGIRRS*GLAQQG
Trigger: ACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCC...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 90 bp GATCACTTTAGAGTTGAGATGGGGACTGAGACGACCAATTCTCTTTaGGTCACAGTAAGGTGCCTGTGGGCCATCCAAGGGGAGATGTCT +
Preference number: 2 (lower is better)
Translates to: DHFRVEMGTETTNSL*VTVRCLWAIQGEMS
Trigger: AGACATCTCCCCTTGGATGGCCCACAGGCACCTTACTGTGACCAAAAGAGAATTGGTCGTCTCAGTCCCCATCTCAACTCTAAAGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR TCA 90 bp GAAAAGCATCCAGCACAGCCTCCCGTAAACTGCTCCTCTTCGTATGATACCAGCATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: EKHPAQPPVNCSSSYDTSIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...GCTGGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTGTGCTGGATGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCGGATGGAGATCTGGATaGAGGCAAAGAGCAGATGTC +
Preference number: 2 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASGWRSG*RQRADV
Trigger: GACATCTGCTCTTTGCCTGCATCCAGATCTCCATCC...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR GCA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTGGGCCAGGTGTTCCTTaGCCTCATCCCCATAAACCC +
Preference number: 2 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFGPGVP*PHPHKP
Trigger: GGGTTTATGGGGATGAGGGCAAGGAACACCTGGCCC...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAAAATTCCCCTGTGGTaGACAACTGAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWKIPLW*TTELMW
Trigger: CCACATCAACTCAGTTGTCCACCACAGGGGAATTTT...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR TCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCACAGTGGCACGCAGACTaGGAGGTGCAATTCAATCTA +
Preference number: 2 (lower is better)
Translates to: LLICLQLLQALQFLALRSQWHAD*EVQFNL
Trigger: TAGATTGAATTGCACCTCTCAGTCTGCGTGCCACTG...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTGAAAGGCAGGATCTGTaGACAAGAAATCGTACCCAA +
Preference number: 2 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPERQDL*TRNRTQ
Trigger: TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTC...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR-3UTR CCA 90 bp ATATTGCTCAAGAAAGCAAGAAGGGAATCAGGCGCTAAAGGCTTCCATGATTATGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACT +
Preference number: 2 (lower is better)
Translates to: ILLKKARRESGAKGFHDYGGLLP*HGWMNT
Trigger: AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACC...ATAATCATGGAAGCCTTTAGCGCCTGATTCCCTTCTTGCTTTCTTGAGCAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGTTCAAAATTCCCCTGTaGTGGACAACTGAGTTGATG +
Preference number: 2 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQFKIPL*WTTELM
Trigger: CATCAACTCAGTTGTCCACCACAGGGGAATTTTGAA...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATGAGCAAGGTAGAGGCTaGGGTGAGGCCCCAGCGATG +
Preference number: 2 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHEQGRG*GEAPAM
Trigger: CATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTC...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTC +
Preference number: 2 (lower is better)
Translates to: KIHGVIILQHELCWVLGLKAPLF*ARSLAF
Trigger: GAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTT...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCACCGGAGTCTCTTCCTTaGCATCTGGCTCATGATAAG +
Preference number: 2 (lower is better)
Translates to: LLICLQLLQALQFLALRSPESLP*HLAHDK
Trigger: CTTATCATGAGCCAGATGCCAAGGAAGAGACTCCGG...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp GAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTCTAGAGTGTCAGTCTCAACATaGCTGCAACTGGGGATCCTT +
Preference number: 2 (lower is better)
Translates to: EPAISFEVEVPLYHHGSRVSVST*LQLGIL
Trigger: AAGGATCCCCAGTTGCAGCCATGTTGAGACTGACAC...TCTAGAACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 90 bp CCAGACTTTGGGAGGCTTGCTCCCAACATGTCTCCCTTCTTTGATTaGCAAAGAGATAAAAGCAAGGGCAGCTTTGTCATGGTGAGCTAC +
Preference number: 2 (lower is better)
Translates to: PDFGRLAPNMSPFFD*QRDKSKGSFVMVSY
Trigger: GTAGCTCACCATGACAAAGCTGCCCTTGCTTTTATCTCTTTGCAAATCAAAGAAGGGAGACATGTTGGGAGCAAGCCTCCCAAAGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp CTGAGGCTCTGGTTTCTGTTCTGTGATGTCATCAACAACAATGTTCTTATCTTCCCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LRLWFLFCDVINNNVLIFPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...GAAGATAAGAACATTGTTGTTGATGACATCACAGAACAGAAACCAGAGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR TCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCCTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGAGCTACCATTTATTGTaGACTTACTCTGTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: KIHGVIILQHELCWVLGLSYHLL*TYSVQA
Trigger: GGCCTGCACAGAGTAAGTGCACAATAAATGGTAGCT...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR GCA 90 bp GAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTCTAGATTTGTGCAGCACCTCTaGCTGTTCTGCAAAGCAATC +
Preference number: 2 (lower is better)
Translates to: EPAISFEVEVPLYHHGSRFVQHL*LFCKAI
Trigger: GATTGCTTTGCAGAACAGGCAGAGGTGCTGCACAAA...TCTAGAACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 2 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 90 bp AGGAAAGGGAGACAACCACAGGTATTTACCAGTGCAATATTCAGTTaGACCATAGAACCCAGGGTGGATAGGGTAAAGGAGACTCACAGG +
Preference number: 2 (lower is better)
Translates to: RKGRQPQVFTSAIFS*TIEPRVDRVKETHR
Trigger: CCTGTGAGTCTCCTTTACCCTATCCACCCTGGGTTCTATGGTCAAACTGAATATTGCACTGGTAAATACCTGTGGTTGTCTCCCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR TCA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGCTCTGGACCTCAGTCTaGCCATCTTCATATTCTATC +
Preference number: 2 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRLWTSV*PSSYSI
Trigger: GATAGAATATGAAGATGGTCAGACTGAGGTCCAGAG...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR TCA 90 bp CACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGAAGTCTTGCCTTGACTaGCTTTGTCTACAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: HLGLESTLKATYPNLSMLKSCLD*LCLQSH
Trigger: GTGGCTTTGTAGACAAAGTCAGTCAAGGCAAGACTT...CAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR-3UTR CCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCAATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 2 (lower is better)
Translates to: LLICLQLLQALQFLALRSIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 90 bp TTATGGCCAGTTTTGGGGCCAGTTTATGGCCAGACTTTGGGAGGCTaGCTCCCAACATGTCTCCCTTCTTTGATTTGCAAAGAGATAAAA +
Preference number: 2 (lower is better)
Translates to: LWPVLGPVYGQTLGG*LPTCLPSLICKEIK
Trigger: TTTTATCTCTTTGCAAATCAAAGAAGGGAGACATGTTGGGAGCAAGCCTCCCAAAGTCTGGCCATAAACTGGCCCCAAAACTGGCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 90 bp AGATTGTATTTATGGCCAGTTTTGGGGCCAGTTTATGGCCAGACTTaGGGAGGCTTGCTCCCAACATGTCTCCCTTCTTTGATTTGCAAA +
Preference number: 2 (lower is better)
Translates to: RLYLWPVLGPVYGQT*GGLLPTCLPSLICK
Trigger: TTTGCAAATCAAAGAAGGGAGACATGTTGGGAGCAAGCCTCCCAAAGTCTGGCCATAAACTGGCCCCAAAACTGGCCATAAATACAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 2 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 2 (lower is better)
Translates to: KIHGVIILQHELCWVLGLSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR GCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCATTTTTGAGGGCAGTATaGCTCAATTATAGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LLICLQLLQALQFLALRSFLRAV*LNYRSR
Trigger: TCTGCTCCTATAATTGAGGCATACTGCCCTCAAAAA...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTCACCTCTGCCTGTTCTaGAAAGCAATCTTCCTAAAC +
Preference number: 2 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFHLCLF*KAIFLN
Trigger: GTTTAGGAAGATTGCTTTGCAGAACAGGCAGAGGTG...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CCA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATGCAGGGGAAGCAGAATaGGGAGGATCAATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHAGEAE*GGSIPA
Trigger: AGCTGGAATTGATCCTCCCCATTCTGCTTCCCCTGC...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACAAAACCTCAGATTTaGGAAGTATTCGAGAGTCAA +
Preference number: 2 (lower is better)
Translates to: KIHGVIILQHELCWVLGLTKPQI*EVFESQ
Trigger: TTGACTCTCGAATACTTCCCAAATCTGAGGTTTTGT...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR GCA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTTCAGTGTGCCTGGGATaGTTTAAATATTTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFSVCLG*FKYLFF
Trigger: AAAGAACAAATATTTAAAGCATCCCAGGCACACTGA...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR GCA 90 bp GCACAGTCATTGAAATCACAGAGCTTCCAAGTGTTTTTATCCATTTTAATAGGTTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 2 (lower is better)
Translates to: AQSLKSQSFQVFLSILIGSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...ACCTATTAAAATGGATAAAAACACTTGGAAGCTCTGTGATTTCAATGACTGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp GAGGGCTGGACCTCAGGTCGAGGGGGCCCTGCCGGATaGCTCCATGTGCTCGAGGAAGCTCTGCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: EGWTSGRGGPAG*LHVLEEALQWQ
Trigger: CTGCCACTGCAGAGCTTCCTCGAGCACATGGAGGCATCCGGCAGGGCCCCCTCGACCTGAGGTCCAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678956.1
3UTR TCA 72 bp TGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 3 (lower is better)
Translates to: WHPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp GAGGGCTGGACCTCAGGTCGAGGGGGCCCTGCCGGATaGCTCCATGTGCTCGAGGAAGCTAGGGTGAAATGG +
Preference number: 3 (lower is better)
Translates to: EGWTSGRGGPAG*LHVLEEARVKW
Trigger: CCATTTCACCCTAGCTTCCTCGAGCACATGGAGGCATCCGGCAGGGCCCCCTCGACCTGAGGTCCAGCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR GCA 72 bp CAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATaGTGGCAGAGGTGGCTCCAGAGCACAGGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: QSKVEAGVRPQR*WQRWLQSTGGG
Trigger: TCCTCCACCTGTGCTCTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 72 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTaGCAGAGGTGGCTCCAGAGCACAGGTGGAGGAGCA +
Preference number: 3 (lower is better)
Translates to: SKVEAGVRPQRC*QRWLQSTGGGA
Trigger: TGCTCCTCCACCTGTGCTCTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp CGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATGCCAAGTGAGCCGCTG +
Preference number: 3 (lower is better)
Translates to: RSSFSCSSSGRP*PMALKMPSEPL
Trigger: CAGCGGCTCACTTGGCATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp GCCCCTGGCTCCAGAGAAGGCCCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGCCACTGCCGACACCAC +
Preference number: 3 (lower is better)
Translates to: APGSREGPRSCC*CCCCSCHCRHH
Trigger: GTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCTCTGGAGCCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp GCTGCCCCTGGCTCCAGAGAAGGCCCTCGAAGTTGCTaGTGCTGCTGTTGCTGCAGTTGCCACTGCCGACAC +
Preference number: 3 (lower is better)
Translates to: AAPGSREGPRSC*CCCCCSCHCRH
Trigger: GTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCTCTGGAGCCAGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp GCAGCTGCCCCTGGCTCCAGAGAAGGCCCTCGAAGTTaGTGCTGCTGCTGTTGCTGCAGTTGCCACTGCCGA +
Preference number: 3 (lower is better)
Translates to: AAAPGSREGPRS*CCCCCCSCHCR
Trigger: TCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATG +
Preference number: 3 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVLGGGL*PWHGWM
Trigger: CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAACTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATG +
Preference number: 3 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKLGGGL*PWHGWM
Trigger: CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAG...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 72 bp TTACATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 3 (lower is better)
Translates to: LHPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR GCA 72 bp GGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTaGACCAGGGATGGCCATCAGAAGAGCTGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: GGLLPWHGWMNT*TRDGHQKSCRP
Trigger: TGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 72 bp AGCTGCAGGCCAGTTTTGAGCCCATGCAGCTGCCCCTaGCTCCAGAGAAGGCCCTCGAAGTTGCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SCRPVLSPCSCP*LQRRPSKLLLL
Trigger: CAGCAGCAGCAACTTCGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 72 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACTTGCACCAGGGATGGC +
Preference number: 3 (lower is better)
Translates to: GASVVLGGGLLP*HGWMNTCTRDG
Trigger: GCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR CCA 72 bp GCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATaGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCC +
Preference number: 3 (lower is better)
Translates to: ALARLDEHLHQG*PSEELQASFEP
Trigger: GGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 3 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CAA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGTTACATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: PSEPLLLPACVASLWYAWLHPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTAA...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp GTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGGGATGGCCATCAGAAG +
Preference number: 3 (lower is better)
Translates to: VVLGGGLLPWHG*MNTCTRDGHQK
Trigger: CTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 72 bp CGGCTGTTGATTTTGGCATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 3 (lower is better)
Translates to: RLLILASEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 3 (lower is better)
Translates to: VVSGSISCTRGWAVALARWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp TCGGCTGTTGATTTTGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTGAGGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 3 (lower is better)
Translates to: SAVDFGIRRSWGLAQQGEAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...CTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp ATTAACACTGCCCTGCTCCTCCTGTTGCTGGGCCTTTaGTTCAGACCCGAAGCTGGAGCTGGCTGGCTTGAC +
Preference number: 3 (lower is better)
Translates to: INTALLLLLLGL*FRPEAGAGWLD
Trigger: GTCAAGCCAGCCAGCTCCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp GCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTaGCCTGTAGAGAAAGGCCCCACCTCCATTCTGTCT +
Preference number: 3 (lower is better)
Translates to: ARSLAFSAVGDS*PVEKGPTSILS
Trigger: AGACAGAATGGAGGTGGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp ATGAACACTTGCACCAGGGATGGCCATCAGAAGAGCTaGAGGCCAGTTTTGAGCCCATGCAGCTGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: MNTCTRDGHQKS*RPVLSPCSCPW
Trigger: CCAGGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 72 bp CAGGTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGGCTGGATGAACACTTG +
Preference number: 3 (lower is better)
Translates to: QVVSGSISCTRG*AVALARLDEHL
Trigger: CAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR CCA 72 bp CAGTTGAACAGCCTCCAGCCCCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGAGCATTCCGTCCAGTC +
Preference number: 3 (lower is better)
Translates to: QLNSLQPLLASH*PAENRRAFRPV
Trigger: GACTGGACGGAATGCTCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGGCTGTTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
3UTR CCA 72 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCC +
Preference number: 3 (lower is better)
Translates to: EPLLLPACVASL*YAWVGRRSLWS
Trigger: GGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp CCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCAATAGGGCCTGCGTGAAGTTCCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 3 (lower is better)
Translates to: PKAGSSESILSNRACVKFQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...GAACTTCACGCAGGCCCTATTGGAGAGGATGCTCTCTGAACTGCCAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 72 bp GCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTaGGAGAAGATCTCTGTGGTCCAGACTTCTCCGAGA +
Preference number: 3 (lower is better)
Translates to: AGMCRIPLVCLG*EKISVVQTSPR
Trigger: TCTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR CCA 72 bp TGTGGCTTAAGAATGCCTTTAAGCGGTTTTCCGCCCTaGGCGGGCCAGGTGTTCCTTGCCCTCATCCCCATA +
Preference number: 3 (lower is better)
Translates to: CGLRMPLSGFPP*AGQVFLALIPI
Trigger: TATGGGGATGAGGGCAAGGAACACCTGGCCCGCCCAGGGCGGAAAACCGCTTAAAGGCATTCTTAAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CAA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGGGCAGTGGGGGACTCTaGCCCTGTAGAGAAAGGCCC +
Preference number: 3 (lower is better)
Translates to: KIHGVIILQHELCWVLGLGSGGL*PCRERP
Trigger: GGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCC...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 72 bp CTTAGGTGGGTGGCTGTGTTCGACAGGTGTTCCTCCTaGCAGTTGGGGTCCTCCTCAGTGTCAGTCTCAACA +
Preference number: 3 (lower is better)
Translates to: LRWVAVFDRCSS*QLGSSSVSVST
Trigger: TGTTGAGACTGACACTGAGGAGGACCCCAACTGTCAGGAGGAACACCTGTCGAACACAGCCACCCACCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp GGACAGGCTATCTGGATTCTGGCCCCAGCTCTGACTTaGAGCATAATACCTGGGCAAACCCCCTCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: GQAIWILAPALT*SIIPGQTPSVL
Trigger: GAGAACAGAGGGGGTTTGCCCAGGTATTATGCTGCAAGTCAGAGCTGGGGCCAGAATCCAGATAGCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469091.1
ENST00000676986.1
ENST00000678823.1
3UTR GCA 72 bp GCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATaGTTGGGTTGGGAGAAGATCTCTGTGGTCCAGACT +
Preference number: 3 (lower is better)
Translates to: AVTAGMCRIPLV*LGWEKISVVQT
Trigger: AGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR GCA 72 bp TGCACAAGAAATCGTACCCAAGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCCTCTGGTATGCTTGGG +
Preference number: 3 (lower is better)
Translates to: CTRNRTQVSRCY*RHVSHPSGMLG
Trigger: CCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGGTACGATTTCTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CCA 72 bp CCTGAGCAGGGGCTGCCAGAACTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAAGTCCACGTTTTTGTG +
Preference number: 3 (lower is better)
Translates to: PEQGLPELRERL*HQDVIQVHVFV
Trigger: CACAAAAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCTGCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp GAATTCAAGAGACTTACATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 3 (lower is better)
Translates to: EFKRLTSEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTAAGTCTCTTGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp GCCCTGAGGCTTGAAGGGCCTCACCCTCTTACCGGATaGAATTCAAGAGACTTACATCCGAAGGAGTTGGGG +
Preference number: 3 (lower is better)
Translates to: ALRLEGPHPLTG*NSRDLHPKELG
Trigger: CCCCAACTCCTTCGGATGTAAGTCTCTTGAATTCCATCCGGTAAGAGGGTGAGGCCCTTCAAGCCTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp CCTGAGCAGGGGCTGCCAGAACTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAAGTCCACGTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: PEQGLPELRERL*HQDVIQVHVFF
Trigger: GAAGAAAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCTGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR TCA 72 bp AACTCAGTCATTCTAGGGCAGTGTGGCCCTGAGGCTTaGAGGGCCTCACCCTCTTACCGGATGGAATTCAAG +
Preference number: 3 (lower is better)
Translates to: NSVILGQCGPEA*RASPSYRMEFK
Trigger: CTTGAATTCCATCCGGTAAGAGGGTGAGGCCCTTCAAGCCTCAGGGCCACACTGCCCTAGAATGACTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR TCA 72 bp AAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTaGGCCGCTGTTACTGCCGGCATGTGTCGCATCCCT +
Preference number: 3 (lower is better)
Translates to: KGRICAQEIVPK*AAVTAGMCRIP
Trigger: AGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR TCA 72 bp GGTTTCAGGTGTCTTGGTGGTATCCAAATCGGCTGTTaGTTTTGGCATCCGAAGGAGTTGGGGGCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: GFRCLGGIQIGC*FWHPKELGAGP
Trigger: TGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp CTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTaGCCACCCATCCACATCACTTCTAGTCTGGAGCAC +
Preference number: 3 (lower is better)
Translates to: LTHPGPFGSPPN*PPIHITSSLEH
Trigger: GTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR GCA 72 bp TGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTaGAGGCACTTAGGATTGGAAAGTACCTTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: WSRLLRDQQLPL*RHLGLESTLKA
Trigger: GGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR GCA 72 bp TCCTTCTCCTCTTCCTTGACATCATTAACACTGCCCTaGTCCTCCTGTTGCTGGGCCTTTGCTTCAGACCCG +
Preference number: 3 (lower is better)
Translates to: SFSSSLTSLTLP*SSCCWAFASDP
Trigger: CGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAATGATGTCAAGGAAGAGGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 72 bp AGAAGGACGAGAAGTGGTGGTCACCGAGTGGGATGCTaGGATGTGAGCTTTCAGAGGTGGAATAGCTCCGAA +
Preference number: 3 (lower is better)
Translates to: RRTRSGGHRVGC*DVSFQRWNSSE
Trigger: TTCGGAGCTATTCCACCTCTGAAAGCTCACATCCCAGCATCCCACTCGGTGACCACCACTTCTCGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp CCTGCACCAGGCTGTTTTCTCCACTCTGGGTATAAATaGAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGT +
Preference number: 3 (lower is better)
Translates to: PAPGCFLHSGYK*NRCAAASPAPR
Trigger: ACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATACCCAGAGTGGAGAAAACAGCCTGGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 3 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CAA 90 bp CCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCAATAGGGCCTGCGTGAAGTTCATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 3 (lower is better)
Translates to: PKAGSSESILSNRACVKFIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...GAACTTCACGCAGGCCCTATTGGAGAGGATGCTCTCTGAACTGCCAGCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR TCA 72 bp GGCAAAGCTGAAGGTGCTGATGATGAGTGGCCGAACTaGGCAACCACAGACAGGATAGAGAGGAAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: GKAEGADDEWPN*ATTDRIERKQG
Trigger: ACCTTGCTTCCTCTCTATCCTGTCTGTGGTTGCTCAGTTCGGCCACTCATCATCAGCACCTTCAGCTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp AGCTCAGGGGTTTGCAAGTCAGATATGGCCAAAGGATaGGCAAAGCTGAAGGTGCTGATGATGAGTGGCCGA +
Preference number: 3 (lower is better)
Translates to: SSGVCKSDMAKG*AKLKVLMMSGR
Trigger: TCGGCCACTCATCATCAGCACCTTCAGCTTTGCCCATCCTTTGGCCATATCTGACTTGCAAACCCCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTaGAGCACACATCTGGCAATGTGGCTGTTCAGTTCC +
Preference number: 3 (lower is better)
Translates to: LPIAHPSTSLLV*STHLAMWLFSS
Trigger: GGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR-3UTR CAA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 3 (lower is better)
Translates to: SPRPAASTLQALRIGKYLTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CAA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 3 (lower is better)
Translates to: KIHGVIILQHELCWVLGLRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR-3UTR CAA 90 bp GAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACGTTTTCTTCCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 3 (lower is better)
Translates to: ELRERLWHQDVIQVHVFFRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...GAAGAAAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CAA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGAATGATGGAAATGGGTaGCTGAGTGTAGTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLNDGNG*LSVVEN
Trigger: ATTCTCCACTACACTCAGCAACCCATTTCCATCATT...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR TCA 72 bp GGTCCAAAAGATACATGGTGTCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGGTCTGACCTGGCATTC +
Preference number: 3 (lower is better)
Translates to: GPKDTWCHNSPA*ALLGPRSDLAF
Trigger: GAATGCCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTTTTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 72 bp TCCTCAGGTTTTCTTCTGCCATCTGTGACAGCTTCTTaGTCTGTCCTTAGGTGGGTGGCTGTGTTCGACAGG +
Preference number: 3 (lower is better)
Translates to: SSGFLLPSVTAS*SVLRWVAVFDR
Trigger: CCTGTCGAACACAGCCACCCACCTAAGGACAGATCAAGAAGCTGTCACAGATGGCAGAAGAAAACCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 72 bp CACGGTTCAATTCAACGACATTTACTGAGGCCTGTTTaGTGCCTAGACTTGTGTGGTGTGCTAGGGCACGGA +
Preference number: 3 (lower is better)
Translates to: HGSIQRHLLRPV*CLDLCGVLGHG
Trigger: TCCGTGCCCTAGCACACCACACAAGTCTAGGCACCAAACAGGCCTCAGTAAATGTCGTTGAATTGAACCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGATCCCTCTGGTATGCTaGGGTTGGGAGAAGATCTCT +
Preference number: 3 (lower is better)
Translates to: KIHGVIILQHELCWVLGLIPLVC*GWEKIS
Trigger: AGAGATCTTCTCCCAACCCAAGCATACCAGAGGGAT...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 72 bp GCAAACCCCCTCTGTTCTCCACTCTGTGTAACGGGGTaGTTAGGACTAGATTCACTGCTTATCTGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: ANPLCSPLCVTG*LGLDSLLIWER
Trigger: CCTTTCCCAGATAAGCAGTGAATCTAGTCCTAATCACCCCGTTACACAGAGTGGAGAACAGAGGGGGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676986.1
ENST00000678823.1
3UTR GCA 72 bp CCTTTTTGCAATGAGAATCCACCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTACATCTGACTCCGTAC +
Preference number: 3 (lower is better)
Translates to: PFCNENPPLRCL*CLHRPLHLTPY
Trigger: GTACGGAGTCAGATGTAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATTCTCATTGCAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp TCAGGGCCTTTTTGCAATGAGAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGGCCTTTACATCTGACT +
Preference number: 3 (lower is better)
Translates to: SGPFCNENPPLR*LCCLHRPLHLT
Trigger: AGTCAGATGTAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CAA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACGGGTCAAAGGAGATTTaGCTTGTGTTGCTGTTATTG +
Preference number: 3 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYGSKEI*LVLLLL
Trigger: CAATAACAGCAACACAAGCAAAATCTCCTTTGACCC...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTACCTGGAAGTCTTGCCTaGACTGACTTTGTCTACAAA +
Preference number: 3 (lower is better)
Translates to: AASTLQALRIGKYLEGHLPGSLA*TDFVYK
Trigger: TTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAGG...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR TCA 72 bp GGTGGTAAACAGCATCAATGCAGCAGACACAGAGACTaGCAAGGGCCCACTGATTTGGTAATTAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: GGKQHQCSRHRD*QGPTDLVIRRS
Trigger: TGACCTCCTAATTACCAAATCAGTGGGCCCTTGTCAGTCTCTGTGTCTGCTGCATTGATGCTGTTTACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp CTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTaGACAAGAAATCGTACCCAAGTGAGCCGCTGTTAC +
Preference number: 3 (lower is better)
Translates to: LDSLLIWERQDL*TRNRTQVSRCY
Trigger: GTAACAGCGGCTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CCA 72 bp ACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTaGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: TSLLVWSTHLAM*LFSSNSWKSCL
Trigger: AAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR-3UTR CAA 90 bp GCACAGTCATTGAAATCACAGAGCTTCCAAGTGTTTTTATCCATTTTAATAGGTTGGCATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: AQSLKSQSFQVFLSILIGWHPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCA...ACCTATTAAAATGGATAAAAACACTTGGAAGCTCTGTGATTTCAATGACTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CAA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 3 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR TCA 72 bp GATCATCTGAACATAGTGTGGCAGTGGCACGCAGACTaGGAGGTGCAATTCAATCTAAACATCCCCTTATGG +
Preference number: 3 (lower is better)
Translates to: DHLNIVWQWHAD*EVQFNLNIPLW
Trigger: CCATAAGGGGATGTTTAGATTGAATTGCACCTCTCAGTCTGCGTGCCACTGCCACACTATGTTCAGATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR TCA 72 bp TGCAAAGAGATAAAAGCAAGGGCAGCTTTGTCATGGTaGGCTACTTTTCTCAGGAGTCGGGATCCACATCTG +
Preference number: 3 (lower is better)
Translates to: CKEIKARAALSW*ATFLRSRDPHL
Trigger: CAGATGTGGATCCCGACTCCTGAGAAAAGTAGCTCACCATGACAAAGCTGCCCTTGCTTTTATCTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp TCCCTTAAGGGAAATGAAAGGATGGGCCAAATTAATTaGAGCAGGAACACGCCCTTAAGACACAGATCGCTC +
Preference number: 3 (lower is better)
Translates to: SLKGNERMGQIN*SRNTPLRHRSL
Trigger: GAGCGATCTGTGTCTTAAGGGCGTGTTCCTGCTGCAATTAATTTGGCCCATCCTTTCATTTCCCTTAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 72 bp AGCACTCTAGGGGGATTGTCTTATCCATTCCCACACTaGACTCAGTTCAGTCAGGTCTTAAGCTGTATGATC +
Preference number: 3 (lower is better)
Translates to: STLGGLSYPFPH*TQFSQVLSCMI
Trigger: GATCATACAGCTTAAGACCTGACTGAACTGAGTCCAGTGTGGGAATGGATAAGACAATCCCCCTAGAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CCA 72 bp GGCATCTGGCTCATGATAAGGTTTCAGGTGTCTTGGTaGTATCCAAATCGGCTGTTGATTTTGGCATCCGAA +
Preference number: 3 (lower is better)
Translates to: GIWLMIRFQVSW*YPNRLLILASE
Trigger: TTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACCTTATCATGAGCCAGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 72 bp CTTGGCATCTGGCTCATGATAAGGTTTCAGGTGTCTTaGTGGTATCCAAATCGGCTGTTGATTTTGGCATCC +
Preference number: 3 (lower is better)
Translates to: LGIWLMIRFQVS*WYPNRLLILAS
Trigger: GGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACCTTATCATGAGCCAGATGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CAA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATAGGCACGTTCCTAGGTaGAAGAGCAAGAGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHRHVPR*KSKSQQ
Trigger: CTGCTGGCTCTTGCTCTTCAACCTAGGAACGTGCCT...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR TCA 72 bp GCCTTTACATCTGACTCCGTACTTTTCCCATCATCCTaGGGCTCTGGTTTCTGTTCTGTGATGTCATCAACA +
Preference number: 3 (lower is better)
Translates to: AFTSDSVLFPSS*GSGFCSVMSST
Trigger: TGTTGATGACATCACAGAACAGAAACCAGAGCCTCAGGATGATGGGAAAAGTACGGAGTCAGATGTAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 72 bp TGCAGCAGGTTGAGGAGTAAGAGGGTAGTGAGGAAATaGAGAGTGTTGAGTGTAGACTACTCTTTTGAGATG +
Preference number: 3 (lower is better)
Translates to: CSRLRSKRVVRK*RVLSVDYSFEM
Trigger: CATCTCAAAAGAGTAGTCTACACTCAACACTCTCCATTTCCTCACTACCCTCTTACTCCTCAACCTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CCA 72 bp AAGGGAAGTAGACACGGCAACACAAAACCTCAGATTTaGGAAGTATTCGAGAGTCAACAGGACAGGGTAGAT +
Preference number: 3 (lower is better)
Translates to: KGSRHGNTKPQI*EVFESQQDRVD
Trigger: ATCTACCCTGTCCTGTTGACTCTCGAATACTTCCCAAATCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR-3UTR CAA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 3 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR GCA 72 bp AGCTTGGACATTATGGCCATTATGGACATGTTACATTaGTGCAGAGATTGTATTTATGGCCAGTTTTGGGGC +
Preference number: 3 (lower is better)
Translates to: SLDIMAIMDMLH*CRDCIYGQFWG
Trigger: GCCCCAAAACTGGCCATAAATACAATCTCTGCAGCAATGTAACATGTCCATAATGGCCATAATGTCCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CCA 72 bp TATGGACATGTTACATTGCTGCAGAGATTGTATTTATaGCCAGTTTTGGGGCCAGTTTATGGCCAGACTTTG +
Preference number: 3 (lower is better)
Translates to: YGHVTLLQRLYL*PVLGPVYGQTL
Trigger: CAAAGTCTGGCCATAAACTGGCCCCAAAACTGGCCATAAATACAATCTCTGCAGCAATGTAACATGTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR GCA 72 bp GGTGAGCTACTTTTCTCAGGAGTCGGGATCCACATCTaGAGACTATACAAAGACAAACAACAGAGATTAAAA +
Preference number: 3 (lower is better)
Translates to: GELLFSGVGIHI*RLYKDKQQRLK
Trigger: TTTTAATCTCTGTTGTTTGTCTTTGTATAGTCTGCAGATGTGGATCCCGACTCCTGAGAAAAGTAGCTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR TCA 72 bp TTGAGGAGCTGTAGAGTGTCAGATGAGTCATCCAAATaGAACAGATATTGCTCAAGAAAGCAAGAAGGGAAT +
Preference number: 3 (lower is better)
Translates to: LRSCRVSDESSK*NRYCSRKQEGN
Trigger: ATTCCCTTCTTGCTTTCTTGAGCAATATCTGTTTCATTTGGATGACTCATCTGACACTCTACAGCTCCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR TCA 72 bp TCTAACTGGGTCCAATCCTGTTTCCAAATAGGTTTTTaGGGGCAGTATGCCTCAATTATAGGAGCAGATTTA +
Preference number: 3 (lower is better)
Translates to: SNWVQSCFQIGF*GQYASIIGADL
Trigger: TAAATCTGCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGGACCCAGTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR-3UTR CAA 90 bp GCACAGTCATTGAAATCACAGAGCTTCCAAGTGTTTTTATCCATTTTAATAGGTTATTACCAGCCCTTATaGAAGGAATACTCATGGCAG +
Preference number: 3 (lower is better)
Translates to: AQSLKSQSFQVFLSILIGYYQPL*KEYSWQ
Trigger: CTGCCATGAGTATTCCTTCAATAAGGGCTGGTAATA...ACCTATTAAAATGGATAAAAACACTTGGAAGCTCTGTGATTTCAATGACTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp GAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCACAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: EQGRGWGEAPAMLAEVAPQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...TGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGCTGGGTCCTCGGTCTaGCCTGGCATTCGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWAGSSV*PGIRPR
Trigger: CCTAGGCCGAATGCCAGGTCAGACCGAGGACCCAGC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCTCCTGCTCCTCGTCTaGCAGGCCCTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMLLLLV*QALPHG
Trigger: GCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAGGAGCAAGGTAGAGGCTaGGGTGAGGCCCCAGCGATG +
Preference number: 4 (lower is better)
Translates to: SKVEAGVRPQRCWQRWLQEQGRG*GEAPAM
Trigger: CATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTC...CTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGCTGGGTCCTCGGTCTaGCCTGGCATTCGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRAGSSV*PGIRPR
Trigger: CCTAGGCCGAATGCCAGGTCAGACCGAGGACCCAGC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLAVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAGGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCC +
Preference number: 4 (lower is better)
Translates to: SKVEAGVRPQRCWQRWLQVSRCY*RHVSHP
Trigger: GGGATGCGACACATGCCGGCAGTAACAGCGGCTCAC...CTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAGGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SKVEAGVRPQRCWQRWLQAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...CTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLAEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTCCTGCTCCTCGTCTaGCAGGCCCTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDELLLLV*QALPHG
Trigger: GCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCCATGCAGCTGCCCCTaGCTCCAGAGAAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRPCSCP*LQRRPS
Trigger: CGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGTAGGCCGGATCCCGCTGATCCCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCCATGCAGCTGCCCCTaGCTCCAGAGAAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GRPDPADPQGWQFREHPLPCSCP*LQRRPS
Trigger: CGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGG...GAGAGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGATCCGGCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CAA 72 bp GGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTaGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GWAVALARLDEH*HQGWPSEELQA
Trigger: GGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCCTGGCACGGCTGGATaGACACTTGCACCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWPGTAG*TLAPGM
Trigger: CATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCACCTGCCCCATGGCTTTaGAGATGCCAAGTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLAPAPWL*RCQVSR
Trigger: GCGGCTCACTTGGCATCTTCAAAGCCATGGGGCAGG...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCCAGGCGACCACGATaGCGTGGGCCGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCARRPR*RGPRVA
Trigger: TGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTGCCAGGCGACCACGATaGCGTGGGCCGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSARRPR*RGPRVA
Trigger: TGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGC...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTGCTGCAGTTGCCACTaGCGACACCACAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWCCSCH*RHHSSG
Trigger: GCCTGAGCTGTGGTGTCGGCAGTGGCAACTGCAGCA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCATGCTGCAGTTGCCACTaGCGACACCACAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLACCSCH*RHHSSG
Trigger: GCCTGAGCTGTGGTGTCGGCAGTGGCAACTGCAGCA...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGACGAGATCCATCCCCTaGGAACCTAGACCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWTRSIP*EPRPGP
Trigger: CGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTREGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCTCCTGCTCCTCGTCTaGCAGGCCCTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLLLLV*QALPHG
Trigger: GCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCAGCATGAGCTCTGCTaGGTCCTCGGTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWQHELC*VLGLTW
Trigger: CCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCCATGCAGCTGCCCCTaGCTCCAGAGAAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARPCSCP*LQRRPS
Trigger: CGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACT +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWGGLLP*HGWMNT
Trigger: AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCTGGGTCCTCGGTCTaGCCTGGCATTCGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCAGSSV*PGIRPR
Trigger: CCTAGGCCGAATGCCAGGTCAGACCGAGGACCCAGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCTGGCACGGCTGGATaGACACTTGCACCAGGGATG +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPGTAG*TLAPGM
Trigger: CATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTGACAGGTGTTCCTCCTaGCAGTTGGGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPDRCSS*QLGSSS
Trigger: TGAGGAGGACCCCAACTGTCAGGAGGAACACCTGTC...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGCCAGGCGACCACGATaGCGTGGGCCGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVARRPR*RGPRVA
Trigger: TGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGCCTCAGAGCCCTCCTaGACCAGGCTGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWASEPS*TRLFSP
Trigger: TGGAGAAAACAGCCTGGTGCAGGAGGGCTCTGAGGC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGCAGTGGGGGACTCTTaGCCTGTAGAGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRAVGDS*PVEKGP
Trigger: GGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGCAGTGGGGGACTCTTaGCCTGTAGAGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMAVGDS*PVEKGP
Trigger: GGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCTCCAGCATGAGCTCTaGTGGGTCCTCGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMLQHEL*WVLGLT
Trigger: GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTGCTGCTGCTGTTGCTaGAGTTGCCACTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWCCCCC*SCHCRH
Trigger: GTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGGCCCTCGAAGTTGCTaGTGCTGCTGTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWGPRSC*CCCCCS
Trigger: ACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCCAGTTTTGAGCCCATaGAGCTGCCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRPVLSP*SCPWLQ
Trigger: CTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGATGATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWMIRRS*GLAQQG
Trigger: ACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCAT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CCA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAACTCCTGCTCCTCGTCTaGCAGGCCCTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKLLLLV*QALPHG
Trigger: GCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAG...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAGGAAGCTGGAGCTGGCTaGCTTGACGCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: SKVEAGVRPQRCWQRWLQEAGAG*LDAPIQ
Trigger: CTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTC...CTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWLPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACT +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRGGLLP*HGWMNT
Trigger: AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRSCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGGGATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEGIRRS*GLAQQG
Trigger: ACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCC...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR TCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCCTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDERGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTGGAGCTGGCTGGCTTaGCGCTCCAATACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMWSWLA*RSNTGC
Trigger: ACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGTCAGTCTTGCATGTTaGGGGTTCCAGCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRVSLAC*GFQPLL
Trigger: GAGCAGCGGCTGGAACCCTCAACATGCAAGACTGAC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGTCAGTCTTGCATGTTaGGGGTTCCAGCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMVSLAC*GFQPLL
Trigger: GAGCAGCGGCTGGAACCCTCAACATGCAAGACTGAC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCTGGCACGGCTGGATaGACACTTGCACCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPGTAG*TLAPGM
Trigger: CATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTGGCACGGCTGGATaGACACTTGCACCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPGTAG*TLAPGM
Trigger: CATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCAATAGGGCCTGCGTGAAGTTCAGGGCAGTGTGGCCCTaGGGCTTGAAGGGCCTCACC +
Preference number: 4 (lower is better)
Translates to: PKAGSSESILSNRACVKFRAVWP*GLKGLT
Trigger: GGTGAGGCCCTTCAAGCCTCAGGGCCACACTGCCCT...GAACTTCACGCAGGCCCTATTGGAGAGGATGCTCTCTGAACTGCCAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGGGTGCCGCCACCAAGTaGGATAGGGAACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGGAATK*DREQRR
Trigger: CCTCCTCTGTTCCCTATCTCACTTGGTGGCGGCACC...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PSEPLLLPACVASLWYAWVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGCCTCAGAGCCCTCCTaGACCAGGCTGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMASEPS*TRLFSP
Trigger: TGGAGAAAACAGCCTGGTGCAGGAGGGCTCTGAGGC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCCTGCTCCTCCTGTTaGTGGGCCTTTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPCSSC*WAFASD
Trigger: GTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGCAGTGGGGGACTCTTaGCCTGTAGAGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEAVGDS*PVEKGP
Trigger: GGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGC...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTCCAGCATGAGCTCTaGTGGGTCCTCGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARLQHEL*WVLGLT
Trigger: GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTCCAGCATGAGCTCTaGTGGGTCCTCGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDELQHEL*WVLGLT
Trigger: GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTGCTGCAGTTGCCACTaGCGACACCACAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNCCSCH*RHHSSG
Trigger: GCCTGAGCTGTGGTGTCGGCAGTGGCAACTGCAGCA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTGCTGCTGCTGCTGTTaGTGCAGTTGCCACTGCCGA +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMCCCCC*CSCHCR
Trigger: TCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCCAGTTTTGAGCCCATaGAGCTGCCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARPVLSP*SCPWLQ
Trigger: CTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGGCCTTCAGCTCAGCGTaGTACCCTCACTCCGAACCG +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGAFSSA*YPHSEP
Trigger: CGGTTCGGAGTGAGGGTAGCACGCTGAGCTGAAGGC...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACGAGATCCATCCCCTaGGAACCTAGACCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNTRSIP*EPRPGP
Trigger: CGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAACGAGATCCATCCCCTaGGAACCTAGACCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDETRSIP*EPRPGP
Trigger: CGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGAAGCTGGAGCTGGCTaGCTTGACGCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWEAGAG*LDAPIQ
Trigger: CTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGTGCTCCTCCTGTTGCTaGGCCTTTGCTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRCSSCC*AFASDP
Trigger: CGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCA...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACAGCATGAGCTCTGCTaGGTCCTCGGTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEQHELC*VLGLTW
Trigger: CCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCATGCAGCTGCCCCTaGCTCCAGAGAAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPCSCP*LQRRPS
Trigger: CGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGTATAAATGGAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCCCATGCAGCTGCCCCTaGCTCCAGAGAAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GINGTDAQQLLLLLVWQAPCSCP*LQRRPS
Trigger: CGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGG...GGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTCACTTGCACCAGGGATaGCCATCAGAAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPHLHQG*PSEELQ
Trigger: CTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTG...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACT +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNGGLLP*HGWMNT
Trigger: AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACC...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARSCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDESCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGACAGGACAGGGTAGATaGTGCCGCCACCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWTGQGR*CRHQVR
Trigger: TCTCACTTGGTGGCGGCACCATCTACCCTGTCCTGT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 72 bp ACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCCTGGCTCCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TRDGHQKSCRPV*SPCSCPWLQRR
Trigger: CCTTCTCTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: PSEPLLLPACVASLWYAWREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GATCAGTTCAACGGTCCATCTGAGGATGTAGGTAGGCCGGATCCCGCTGATCCCGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: DQFNGPSEDVGRPDPADPAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...GGGATCAGCGGGATCCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTGGAGCTGGCTGGCTTaGCGCTCCAATACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNWSWLA*RSNTGC
Trigger: ACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATGGAGCTGGCTGGCTTaGCGCTCCAATACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEWSWLA*RSNTGC
Trigger: ACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGTCAGTCTTGCATGTTaGGGGTTCCAGCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARVSLAC*GFQPLL
Trigger: GAGCAGCGGCTGGAACCCTCAACATGCAAGACTGAC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTCCTGGCACGGCTGGATaGACACTTGCACCAGGGATG +
Preference number: 4 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSPGTAG*TLAPGM
Trigger: CATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGG...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCCTGTGGTGGACAACTaGGTTGATGTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWPVVDN*VDVADP
Trigger: TGGATCAGCCACATCAACTCAGTTGTCCACCACAGG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GACCCGAAGCTGGAGCTGGCTGGCTTGACGCTCCAATACAGGCTGTCTAGTGTATGGAGGAGCAGGCTTTaGGGTGGGGCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: DPKLELAGLTLQYRLSSVWRSRL*GGARPP
Trigger: AGGTGGCCTTGCCCCACCTCAAAGCCTGCTCCTCCA...TACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGGTGCCGCCACCAAGTaGGATAGGGAACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTGAATK*DREQRR
Trigger: CCTCCTCTGTTCCCTATCTCACTTGGTGGCGGCACC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACAGCACTGCTGGGAATaGGAGAGCAGAGCACGGTTC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEQHCWE*ESRARF
Trigger: GAACCGTGCTCTGCTCTCTCATTCCCAGCAGTGCTG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCCTGCCCCATGGCTTTaGAGATGCCAAGTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCPAPWL*RCQVSR
Trigger: GCGGCTCACTTGGCATCTTCAAAGCCATGGGGCAGG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARSSGRP*PMALKM
Trigger: CATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNSSGRP*PMALKM
Trigger: CATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCTGCTCCTCCTGTTaGTGGGCCTTTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPCSSC*WAFASD
Trigger: GTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCCTGCTCCTCCTGTTaGTGGGCCTTTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPCSSC*WAFASD
Trigger: GTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCCCTGCTCCTCCTGTTaGTGGGCCTTTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARPCSSC*WAFASD
Trigger: GTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTCATTAACACTGCCCTaGTCCTCCTGTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMSLTLP*SSCCWA
Trigger: GGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAATGA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGCAGTGGGGGACTCTTaGCCTGTAGAGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTAVGDS*PVEKGP
Trigger: GGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGCAGTTGCCACTaGCGACACCACAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTCCSCH*RHHSSG
Trigger: GCCTGAGCTGTGGTGTCGGCAGTGGCAACTGCAGCA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTGCTGCTGCTGCTGTTaGTGCAGTTGCCACTGCCGA +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARCCCCC*CSCHCR
Trigger: TCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATGCTGCTGCTGCTGTTaGTGCAGTTGCCACTGCCGA +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDECCCCC*CSCHCR
Trigger: TCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGGCCATCAGAAGAGCTaGAGGCCAGTTTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRGHQKS*RPVLSP
Trigger: TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGGCTGGATGAACACTTaGACCAGGGATGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMGWMNT*TRDGHQ
Trigger: CTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGGCTGGATGAACACTTaGACCAGGGATGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRGWMNT*TRDGHQ
Trigger: CTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTGCCTTCAGCTCAGCGTaGTACCCTCACTCCGAACCG +
Preference number: 4 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSAFSSA*YPHSEP
Trigger: CGGTTCGGAGTGAGGGTAGCACGCTGAGCTGAAGGC...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR CCA 90 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAGCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 4 (lower is better)
Translates to: SKVEAGVRPQRCWQRWLQHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...CTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACATGATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNMIRRS*GLAQQG
Trigger: ACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCAT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAATGGAGACTTCCCAATaGGGGAGGCCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEMETSQ*GRPQSP
Trigger: AGGGCTCTGAGGCCTCCCCCATTGGGAAGTCTCCAT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGATGGAGACTTCCCAATaGGGGAGGCCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARMETSQ*GRPQSP
Trigger: AGGGCTCTGAGGCCTCCCCCATTGGGAAGTCTCCAT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCAGCATGAGCTCTGCTaGGTCCTCGGTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCQHELC*VLGLTW
Trigger: CCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDELPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARLPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCSCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGAGCAGGCTTTGAGGTaGGGCAAGGCCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCEQALR*GKATSS
Trigger: GGATGAGGTGGCCTTGCCCCACCTCAAAGCCTGCTC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGTATAAATGGAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCGAGCAAGGTAGAGGCTaGGGTGAGGCCCCAGCGATG +
Preference number: 4 (lower is better)
Translates to: GINGTDAQQLLLLLVWQAEQGRG*GEAPAM
Trigger: CATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTC...GGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 72 bp TCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATGAACACTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SQGASVVLGGGL*PWHGWMNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR CAA 72 bp GGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTaGCCCTGTAGAGAAAGGCCCCACCTCCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: GQKPSILGSGGL*PCRERPHLHSV
Trigger: GACAGAATGGAGGTGGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 72 bp CACCACAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTaGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HHSSGPRCQSCM*RVPAAALAQAG
Trigger: ACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAATTCCCACGACATACTaGGCTCAACAACAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLAIPTTY*AQQQAL
Trigger: CAGAGCCTGTTGTTGAGCTCAGTATGTCGTGGGAAT...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SRLLRDQQLPLCRHLGLEGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARHNSPA*ALLGPR
Trigger: CCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTCAGTCTTGCATGTTaGGGGTTCCAGCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSEPLLLPACVASLWYAWVSLAC*GFQPLL
Trigger: GAGCAGCGGCTGGAACCCTCAACATGCAAGACTGAC...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCGAGTACAGGAGGCTaGATCTTGGGGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWSSTGG*ILGEGP
Trigger: TGGCCCCTCCCCCAAGATTCAGCCTCCTGTACTCGA...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCCTCCTCTTGAAACTCTaGCTCATCCAGGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSLLLKL*LIQALL
Trigger: CAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGGAG...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCCAGTGGCACGCAGACTaGGAGGTGCAATTCAATCTA +
Preference number: 4 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSQWHAD*EVQFNL
Trigger: TAGATTGAATTGCACCTCTCAGTCTGCGTGCCACTG...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGCCAGGCGACCACGATaGCGTGGGCCGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSARRPR*RGPRVA
Trigger: TGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCGGCTGTTGATTTTGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTGAGCCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SAVDFGIRRSWGLAQQGEPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...CTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGTAGGCCGGATCCCGCTGATCCCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: GRPDPADPQGWQFREHPLPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...GAGAGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGATCCGGCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDELSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GATCAGTTCAACGGTCCATCTGAGGATGTAGGTAGGCCGGATCCCGCTGATCCCCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DQFNGPSEDVGRPDPADPPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...GGGATCAGCGGGATCCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR GCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTSSGRP*PMALKM
Trigger: CATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCCTCAGAGCCCTCCTaGACCAGGCTGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCASEPS*TRLFSP
Trigger: TGGAGAAAACAGCCTGGTGCAGGAGGGCTCTGAGGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATCATTAACACTGCCCTaGTCCTCCTGTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDESLTLP*SSCCWA
Trigger: GGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAATGA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTCATTAACACTGCCCTaGTCCTCCTGTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNSLTLP*SSCCWA
Trigger: GGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAATGA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGCAGTGGGGGACTCTTaGCCTGTAGAGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVAVGDS*PVEKGP
Trigger: GGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTCTTCTGAGCTAACCTaGCATGCAGAGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWSSELT*HAEPCK
Trigger: TTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGAAGA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
CDS-3UTR GCA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCTCCAGCATGAGCTCTaGTGGGTCCTCGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLLQHEL*WVLGLT
Trigger: GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAG...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCAAGGTGTCAGTCTTaGATGTTGAGGGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPRCQS*MLRVPA
Trigger: GGCTGGAACCCTCAACATGCAAGACTGACACCTTGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGCTGCTGTTGCTaGAGTTGCCACTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTCCCCC*SCHCRH
Trigger: GTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGCTGCTGCTGTTaGTGCAGTTGCCACTGCCGA +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTCCCCC*CSCHCR
Trigger: TCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPRSCC*CCCCSC
Trigger: GCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPRSCC*CCCCSC
Trigger: GCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGGCCCTCGAAGTTGCTaGTGCTGCTGTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTGPRSC*CCCCCS
Trigger: ACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCAGTTTTGAGCCCATaGAGCTGCCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPVLSP*SCPWLQ
Trigger: CTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGGCCATCAGAAGAGCTaGAGGCCAGTTTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEGHQKS*RPVLSP
Trigger: TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCC...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACGGCTGGATGAACACTTaGACCAGGGATGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNGWMNT*TRDGHQ
Trigger: CTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCC...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGCAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGTTGGTCACAGTAAGGTaGCTGTGGGCCATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGLVTVR*LWAIQG
Trigger: CCCTTGGATGGCCCACAGGCACCTTACTGTGACCAA...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGACTTTGGGAGGCTTaGTCCCAACATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSRLWEA*SQHVSL
Trigger: AAGGGAGACATGTTGGGAGCAAGCCTCCCAAAGTCT...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGACGAGATCCATCCCCTaGGAACCTAGACCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLTRSIP*EPRPGP
Trigger: CGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGT...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGACACATTCTACACGTaGGGACGGGTTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRDTFYT*GRVIPR
Trigger: GCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCAGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NTCTRDGHQKSCRPVLSPACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCACATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 4 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLAHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TLKATYPNLSMLLLSLPPEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...GGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCTCCTGCTCCTCGTCTaGCAGGCCCTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSLLLLV*QALPHG
Trigger: GCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGCTCCTCCTGTTGCTaGGCCTTTGCTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCCSSCC*AFASDP
Trigger: CGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGTGCTCCTCCTGTTGCTaGGCCTTTGCTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: PSEPLLLPACVASLWYAWCSSCC*AFASDP
Trigger: CGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCA...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTCCTCCTCCTCTACCTaGTCTGGCAAGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMSSSST*SGKTSF
Trigger: GAAAGAGGTCTTGCCAGACCAGGTAGAGGAGGAGGA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCAGCATGAGCTCTGCTaGGTCCTCGGTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVQHELC*VLGLTW
Trigger: CCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCAGCATGAGCTCTGCTaGGTCCTCGGTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLQHELC*VLGLTW
Trigger: CCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTG...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATaGCCATCAGAAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEHLHQG*PSEELQ
Trigger: CTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCACTTGCACCAGGGATaGCCATCAGAAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNHLHQG*PSEELQ
Trigger: CTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GATCAGTTCAACGGTCCATCTGAGGATGTAGGTAGGCCGGATCCCGCTGATCCCGGTGGGCTGTTGCCCTaGCACGGCTGGATGAACACT +
Preference number: 4 (lower is better)
Translates to: DQFNGPSEDVGRPDPADPGGLLP*HGWMNT
Trigger: AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACC...GGGATCAGCGGGATCCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVSCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGTGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRCVASL*YAWVGR
Trigger: TCTCCCAACCCAAGCATACCAGAGGGATGCGACACA...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GACCCGAAGCTGGAGCTGGCTGGCTTGACGCTCCAATACAGGCTGTCTAGTGTAGAGCAGGCTTTGAGGTaGGGCAAGGCCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: DPKLELAGLTLQYRLSSVEQALR*GKATSS
Trigger: GGATGAGGTGGCCTTGCCCCACCTCAAAGCCTGCTC...TACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCAGCAGTTCTCGGGCTCTTTCATATAGCTCTTTATGACTCAGGGCCTTTTTGCCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: PAVLGLFHIALYDSGPFCPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...GCAAAAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATACCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGC +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIPTRPC*ARRPRC
Trigger: GCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGG...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGGGAATATTTACCTCTTaGGCCAGACACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMGIFTS*ARHLRG
Trigger: CCCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCC...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCAAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: NTCTRDGHQKSCRPVLSPRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCTCTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCAGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PLETLTHPGPFGSPPNCPGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...TGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: PAASTLQALRIGKYLEGHAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...GTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTGGAGCTGGCTGGCTTaGCGCTCCAATACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTWSWLA*RSNTGC
Trigger: ACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCA...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCATCGCACGTCTTCTaGGCTAACCTGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPSHVF*ANLPCR
Trigger: TCTGCATGGCAGGTTAGCTCAGAAGACGTGCGATGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCCATCGCACGTCTTCTaGGCTAACCTGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCPSHVF*ANLPCR
Trigger: TCTGCATGGCAGGTTAGCTCAGAAGACGTGCGATGG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
CDS-3UTR TCA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTAGCTGGGTCCTCGGTCTaGCCTGGCATTCGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: AASTLQALRIGKYLEGHLAGSSV*PGIRPR
Trigger: CCTAGGCCGAATGCCAGGTCAGACCGAGGACCCAGC...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTHNSPA*ALLGPR
Trigger: CCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTGTGGTGGACAACTaGGTTGATGTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPVVDN*VDVADP
Trigger: TGGATCAGCCACATCAACTCAGTTGTCCACCACAGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCTGTGGTGGACAACTaGGTTGATGTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPVVDN*VDVADP
Trigger: TGGATCAGCCACATCAACTCAGTTGTCCACCACAGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTTTGAAGATGCCAAGTaGGCCGCTGTTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTFEDAK*AAVTAG
Trigger: GCCGGCAGTAACAGCGGCTCACTTGGCATCTTCAAA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGCCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDENPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDENALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNNALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCTGTTGCTGGGCCTTTaGTTCAGACCCGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCLLLGL*FRPEAG
Trigger: TCCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCCAAGGTGTCAGTCTTaGATGTTGAGGGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARPRCQS*MLRVPA
Trigger: GGCTGGAACCCTCAACATGCAAGACTGACACCTTGG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAATGCTGCTGCTGCTGTTaGTGCAGTTGCCACTGCCGA +
Preference number: 4 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKCCCCC*CSCHCR
Trigger: TCGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCA...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCPRSCC*CCCCSC
Trigger: GCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPRSCC*CCCCSC
Trigger: GCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGGCCCTCGAAGTTGCTaGTGCTGCTGTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVGPRSC*CCCCCS
Trigger: ACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGGCCATCAGAAGAGCTaGAGGCCAGTTTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTGHQKS*RPVLSP
Trigger: TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGGCTGGATGAACACTTaGACCAGGGATGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCGWMNT*TRDGHQ
Trigger: CTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GAAAAGCATCCAGCACAGCCTCCCGTAAACTGCTCCTCTTCGTATGATACCAGCCAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: EKHPAQPPVNCSSSYDTSQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...GCTGGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTGTGCTGGATGCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp CCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCAGCAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: PIHITSSLEHTSGNVAVQQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...CTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATGCCTTCAGCTCAGCGTaGTACCCTCACTCCGAACCG +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHAFSSA*YPHSEP
Trigger: CGGTTCGGAGTGAGGGTAGCACGCTGAGCTGAAGGC...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTTTTGTGCAGCACCTCTaGCTGTTCTGCAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPFVQHL*LFCKAI
Trigger: GATTGCTTTGCAGAACAGGCAGAGGTGCTGCACAAA...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGACACATTCTACACGTaGGGACGGGTTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARDTFYT*GRVIPR
Trigger: GCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLAACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRLLRDQQLPLCRHLGLEEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTATGATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVMIRRS*GLAQQG
Trigger: ACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCAT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTATGGAGACTTCCCAATaGGGGAGGCCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVMETSQ*GRPQSP
Trigger: AGGGCTCTGAGGCCTCCCCCATTGGGAAGTCTCCAT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGAAGCTGGAGCTGGCTaGCTTGACGCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTEAGAG*LDAPIQ
Trigger: CTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GACCCGAAGCTGGAGCTGGCTGGCTTGACGCTCCAATACAGGCTGTCTAGTGTATGCTCCTCCTGTTGCTaGGCCTTTGCTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: DPKLELAGLTLQYRLSSVCSSCC*AFASDP
Trigger: CGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCA...TACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTGCTCCTCCTGTTGCTaGGCCTTTGCTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVCSSCC*AFASDP
Trigger: CGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATCCTCCTCCTCTACCTaGTCTGGCAAGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDESSSST*SGKTSF
Trigger: GAAAGAGGTCTTGCCAGACCAGGTAGAGGAGGAGGA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTCCTCCTCCTCTACCTaGTCTGGCAAGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARSSSST*SGKTSF
Trigger: GAAAGAGGTCTTGCCAGACCAGGTAGAGGAGGAGGA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTGCTCTAGCACAGGCTaGTCCAAAAGATACATGGTG +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWCSSTG*SKRYMV
Trigger: CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGACAACTGAGTTGATGTaGCTGATCCAGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRTTELM*LIQAVS
Trigger: GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGT...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCTGGTATGCTTGGGTTaGGAGAAGATCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRLVCLG*EKISVV
Trigger: GACCACAGAGATCTTCTCCCAACCCAAGCATACCAG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTGGCCCTGAGGCTTGAAGGGCCTCACCCTCTTACCGGATGGAATTCAAGAGACTACATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: VALRLEGPHPLTGWNSRDYIRRS*GLAQQG
Trigger: ACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTA...GTCTCTTGAATTCCATCCGGTAAGAGGGTGAGGCCCTTCAAGCCTCAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAAAAGAGCAGATGTCATaGGATGCAAGGGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: EQGRGWGEAPAMLAEVAPKEQMS*DARVRT
Trigger: AGTTCTCACCCTTGCATCCCATGACATCTGCTCTTT...TGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTGAAGCTAGGGTGAAATaGGAGAGGGGGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTEARVK*ERGRGL
Trigger: CAAGCCCCTCCCCCTCTCCCATTTCACCCTAGCTTC...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTACAGGACAGGGTAGATaGTGCCGCCACCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTTGQGR*CRHQVR
Trigger: TCTCACTTGGTGGCGGCACCATCTACCCTGTCCTGT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTAGGTTTCAGGTGTCTTaGTGGTATCCAAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPRFQVS*WYPNRL
Trigger: CAGCCGATTTGGATACCACCAAGACACCTGAAACCT...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGATTCCCACGACATACTaGGCTCAACAACAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARIPTTY*AQQQAL
Trigger: CAGAGCCTGTTGTTGAGCTCAGTATGTCGTGGGAAT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAATTCCCACGACATACTaGGCTCAACAACAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEIPTTY*AQQQAL
Trigger: CAGAGCCTGTTGTTGAGCTCAGTATGTCGTGGGAAT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGGAATATTTACCTCTTaGGCCAGACACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARGIFTS*ARHLRG
Trigger: CCCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATCCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGACCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDERAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTAGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: AASTLQALRIGKYLEGHLAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCATCGCACGTCTTCTaGGCTAACCTGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPSHVF*ANLPCR
Trigger: TCTGCATGGCAGGTTAGCTCAGAAGACGTGCGATGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVHNSPA*ALLGPR
Trigger: CCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCTCTGGACCTCAGTCTaGCCATCTTCATATTCTATC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWLWTSV*PSSYSI
Trigger: GATAGAATATGAAGATGGTCAGACTGAGGTCCAGAG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTCTCAGCTACCCGGGCTaGGGAGCAGGGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SPPNCPPIHITSSLEHTSLSYPG*GAGEAE
Trigger: TTCTGCTTCCCCTGCTCCTCAGCCCGGGTAGCTGAG...AGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCGGCTGTTGATTTTGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTGAGAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: SAVDFGIRRSWGLAQQGENPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...CTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGTCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTNALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCNALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: PSEPLLLPACVASLWYAWNALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GAARTERTALAPGRHSSPLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR GCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATGCCTCAGAGCCCTCCTaGACCAGGCTGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHASEPS*TRLFSP
Trigger: TGGAGAAAACAGCCTGGTGCAGGAGGGCTCTGAGGC...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGCCTCAGAGCCCTCCTaGACCAGGCTGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCASEPS*TRLFSP
Trigger: TGGAGAAAACAGCCTGGTGCAGGAGGGCTCTGAGGC...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATCTTCTGAGCTAACCTaGCATGCAGAGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDESSELT*HAEPCK
Trigger: TTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGAAGA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
CDS-3UTR GCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGCTCCAGCATGAGCTCTaGTGGGTCCTCGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQLQHEL*WVLGLT
Trigger: GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAG...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCAAGGTGTCAGTCTTaGATGTTGAGGGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPRCQS*MLRVPA
Trigger: GGCTGGAACCCTCAACATGCAAGACTGACACCTTGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCCAAGGTGTCAGTCTTaGATGTTGAGGGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCPRCQS*MLRVPA
Trigger: GGCTGGAACCCTCAACATGCAAGACTGACACCTTGG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCAGGCCCTCGAAGTTGCTaGTGCTGCTGTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: NTCTRDGHQKSCRPVLSPGPRSC*CCCCCS
Trigger: ACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCC...TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTGGCCATCAGAAGAGCTaGAGGCCAGTTTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTGHQKS*RPVLSP
Trigger: TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCC...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGGGCTGGATGAACACTTaGACCAGGGATGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLGWMNT*TRDGHQ
Trigger: CTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCC...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCC +
Preference number: 4 (lower is better)
Translates to: PAASTLQALRIGKYLEGHVSRCY*RHVSHP
Trigger: GGGATGCGACACATGCCGGCAGTAACAGCGGCTCAC...GTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGACGAGATCCATCCCCTaGGAACCTAGACCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQTRSIP*EPRPGP
Trigger: CGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGT...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDELRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGTATAAATGGAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: GINGTDAQQLLLLLVWQAADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...GGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCAGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: GAARTERTALAPGRHSSPADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GAAAAGCATCCAGCACAGCCTCCCGTAAACTGCTCCTCTTCGTATGATACCAGCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EKHPAQPPVNCSSSYDTSEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...GCTGGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTGTGCTGGATGCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGAAGCTGGAGCTGGCTaGCTTGACGCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVEAGAG*LDAPIQ
Trigger: CTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCTCCTCTACCTGGTCTaGCAAGACCTCTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCLLYLV*QDLFLL
Trigger: GAGGAGAAAGAGGTCTTGCCAGACCAGGTAGAGGAG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCTCCTCTACCTGGTCTaGCAAGACCTCTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLLYLV*QDLFLL
Trigger: GAGGAGAAAGAGGTCTTGCCAGACCAGGTAGAGGAG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTTGCCCTGGCACGGCTaGATGAACACTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TLKATYPNLSMLLLSLPPLPWHG*MNTCTR
Trigger: CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAA...GGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGACAACTGAGTTGATGTaGCTGATCCAGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARTTELM*LIQAVS
Trigger: GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCGCTACCATGGTAAGTTaGGCCAGAATCAGAAAGATC +
Preference number: 4 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSATMVS*ARIRKI
Trigger: GATCTTTCTGATTCTGGCCCAACTTACCATGGTAGC...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGCGATGCTGGCAGAGGTaGCTCCAGAGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQRCWQR*LQSTGG
Trigger: TCCACCTGTGCTCTGGAGCCACCTCTGCCAGCATCG...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGGACTAAGAGGGTCTTaGCATCCAGACTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTGLRGS*HPDSHF
Trigger: GAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 72 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTaGGGAGAAGATCTCTGTGGTCCAGACTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLG*GEDLCGPDFSE
Trigger: CTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR CAA 72 bp CTCCAACTCCCAGGTCTCTCTCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTTCTGGAGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: LQLPGLSQAVLQ*AAPIGLLEPIQ
Trigger: CTGGATTGGCTCCAGAAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTGAGAGAGACCTGGGAGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTAAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: AASTLQALRIGKYLEGHLREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGGAATATTTACCTCTTaGGCCAGACACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCGIFTS*ARHLRG
Trigger: CCCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGCCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGACTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: PFGSPPNCPPIHITSSLERGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...CTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GATAGAGGGAAGGAGACACTAAGGGAAGTAGACACGGCAACACAAAACCTCAGAGCTGGGTCCTCGGTCTaGCCTGGCATTCGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: DRGKETLREVDTATQNLRAGSSV*PGIRPR
Trigger: CCTAGGCCGAATGCCAGGTCAGACCGAGGACCCAGC...TCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTTAGTGTCTCCTTCCCTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCTGTGGTGGACAACTaGGTTGATGTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPVVDN*VDVADP
Trigger: TGGATCAGCCACATCAACTCAGTTGTCCACCACAGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATGAAATCGTACCCAAGTaGGCCGCTGTTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHEIVPK*AAVTAG
Trigger: GCCGGCAGTAACAGCGGCTCACTTGGGTACGATTTC...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCGAAATCGTACCCAAGTaGGCCGCTGTTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSEIVPK*AAVTAG
Trigger: GCCGGCAGTAACAGCGGCTCACTTGGGTACGATTTC...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTGTCGAGGAAGCTAGGGTaGAATGGGAGAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AHIWQCGCSVPTPGSLALSRKLG*NGRGGG
Trigger: CCCTCCCCCTCTCCCATTTCACCCTAGCTTCCTCGA...CAAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGTCAAATGCCTCCTCTTaGAACTCTGACTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGSNASS*NSDSSR
Trigger: CCTGGATGAGTCAGAGTTTCAAGAGGAGGCATTTGA...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAACCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SRLLRDQQLPLCRHLGLEPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACATGGTGCTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VEGSSRCSSTGWSKRYMVLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSSSGRP*PMALKM
Trigger: CATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGA...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGTATAAATGGAACAGATaGGCAGCAGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRYKWNR*AAASPA
Trigger: AGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATA...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCATTAACACTGCCCTaGTCCTCCTGTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRSLTLP*SSCCWA
Trigger: GGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAATGA...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTCTTCTGAGCTAACCTaGCATGCAGAGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTSSELT*HAEPCK
Trigger: TTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGAAGA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCAAGGTGTCAGTCTTaGATGTTGAGGGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPRCQS*MLRVPA
Trigger: GGCTGGAACCCTCAACATGCAAGACTGACACCTTGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTGCTGCAGTTGCCACTaGCGACACCACAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSCCSCH*RHHSSG
Trigger: GCCTGAGCTGTGGTGTCGGCAGTGGCAACTGCAGCA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGGGCCCTCGAAGTTGCTaGTGCTGCTGTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQGPRSC*CCCCCS
Trigger: ACTGCAGCAACAGCAGCAGCAGCAACTTCGAGGGCC...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCCAGTTTTGAGCCCATaGAGCTGCCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSPVLSP*SCPWLQ
Trigger: CTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCAGTTTTGAGCCCATaGAGCTGCCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLPVLSP*SCPWLQ
Trigger: CTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGG...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGCCATCAGAAGAGCTaGAGGCCAGTTTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCGHQKS*RPVLSP
Trigger: TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCC...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATACAACAACAGGCTCTGTaGCGCGCCGCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIQQQAL*RAAPHS
Trigger: GCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTG...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCTGTGTCGCATCCCTCTGGTATaGTTGGGTTGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: CGPDFSETSSFHSAGTLCRIPLV*LGWEKI
Trigger: GATCTTCTCCCAACCCAAGCATACCAGAGGGATGCG...ACACAGAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCC +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLVSRCY*RHVSHP
Trigger: GGGATGCGACACATGCCGGCAGTAACAGCGGCTCAC...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGGGTTCTCCTCCCAATTaGCCACCCATCCACATCACT +
Preference number: 4 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLGSPPN*PPIHIT
Trigger: AGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACC...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCACAGCAGCTTCCACTCTaGAGGCACTCTGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: NTCTRDGHQKSCRPVLSPQQLPL*RHSVSQ
Trigger: TTGGGACACAGAGTGCCTGCAGAGTGGAAGCTGCTG...TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CCA 90 bp CCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PFGSPPNCPPIHITSSLEAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...CTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTGGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: AHIWQCGCSVPTPGSLALAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...CAAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATAGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTGAGGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: TAYLGKAGSVHKKSYPSEATTMP*AESGND
Trigger: GTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGC...CTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGGACACATTCTACACGTaGGGACGGGTTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWDTFYT*GRVIPR
Trigger: GCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTC...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGTATAAATGGAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: GINGTDAQQLLLLLVWQAVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...GGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAACTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCTGTGTCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: CGPDFSETSSFHSAGTLCLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...ACACAGAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KIHGVIILQHELCWVLGLEGVGG*PSKVSP
Trigger: TGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTC...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGGAGACTTCCCAATaGGGGAGGCCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLAMETSQ*GRPQSP
Trigger: AGGGCTCTGAGGCCTCCCCCATTGGGAAGTCTCCAT...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAACTCCTCTACCTGGTCTaGCAAGACCTCTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKLLYLV*QDLFLL
Trigger: GAGGAGAAAGAGGTCTTGCCAGACCAGGTAGAGGAG...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEKAPLF*ARSLAF
Trigger: GAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGCATGAGCTCTGCTaGGTCCTCGGTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSQHELC*VLGLTW
Trigger: CCAGGTCAGACCGAGGACCCAGCAGAGCTCATGCTG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATGCTCTAGCACAGGCTaGTCCAAAAGATACATGGTG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDECSSTG*SKRYMV
Trigger: CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTACAACTGAGTTGATGTaGCTGATCCAGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSTTELM*LIQAVS
Trigger: GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGT...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGAAAATTCCCCTGTGGTaGACAACTGAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRKIPLW*TTELMW
Trigger: CCACATCAACTCAGTTGTCCACCACAGGGGAATTTT...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGTAGGCCGGATCCCGCTGATCCCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCAAAATTCCCCTGTGGTaGACAACTGAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: GRPDPADPQGWQFREHPLKIPLW*TTELMW
Trigger: CCACATCAACTCAGTTGTCCACCACAGGGGAATTTT...GAGAGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGATCCGGCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTCCCTCTGGTATGCTTaGGTTGGGAGAAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCSLWYA*VGRRSL
Trigger: CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCACACCGAGTGGGATGCTaGGATGTGAGCTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: NTCTRDGHQKSCRPVLSPHRVGC*DVSFQR
Trigger: CCTCTGAAAGCTCACATCCCAGCATCCCACTCGGTG...TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGGCAGGGGAAGCAGAATaGGGAGGATCAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLAGEAE*GGSIPA
Trigger: AGCTGGAATTGATCCTCCCCATTCTGCTTCCCCTGC...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCCGATGCTGGCAGAGGTaGCTCCAGAGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTRCWQR*LQSTGG
Trigger: TCCACCTGTGCTCTGGAGCCACCTCTGCCAGCATCG...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTGGCATCCGAAGGAGTTaGGGGCTGGCCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGGIRRS*GLAQQG
Trigger: ACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCC...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTCCAGCTTGGACATTATaGCCATTATGGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPPAWTL*PLWTCY
Trigger: GTAACATGTCCATAATGGCCATAATGTCCAAGCTGG...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 72 bp CAGGTGTCTTGGTGGTATCCAAATCGGCTGTTGATTTaGGCATCCGAAGGAGTTGGGGGCTGGCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QVSWWYPNRLLI*ASEGVGGWPSK
Trigger: CTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTATTCCCACGACATACTaGGCTCAACAACAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVIPTTY*AQQQAL
Trigger: CAGAGCCTGTTGTTGAGCTCAGTATGTCGTGGGAAT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGGGAATATTTACCTCTTaGGCCAGACACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLGIFTS*ARHLRG
Trigger: CCCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCC...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCACTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLALVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCACTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLALLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACGTTTTCTTCAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: ELRERLWHQDVIQVHVFFRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...GAAGAAAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GGACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTGGGAGGCGGAGCAGTTaGACAGCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GLDSLLIWERQDLCTRNRGRRSS*TASSPF
Trigger: GAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCC...ACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTGGAGCTGGCTGGCTTaGCGCTCCAATACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSWSWLA*RSNTGC
Trigger: ACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGGTCAGTCTTGCATGTTaGGGGTTCCAGCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLVSLAC*GFQPLL
Trigger: GAGCAGCGGCTGGAACCCTCAACATGCAAGACTGAC...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp TCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGAAATCGTACCCAAGTaGGCCGCTGTTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SPPNCPPIHITSSLEHTSEIVPK*AAVTAG
Trigger: GCCGGCAGTAACAGCGGCTCACTTGGGTACGATTTC...AGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGGAAAGTCACTGGAGTTaGGGAGCTGTAGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLESHWS*GAVECQ
Trigger: CTGACACTCTACAGCTCCTCAACTCCAGTGACTTTC...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp CACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGTGGAGGAGCAGGCTTTaGGGTGGGGCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: HLGLESTLKATYPNLSMLWRSRL*GGARPP
Trigger: AGGTGGCCTTGCCCCACCTCAAAGCCTGCTCCTCCA...CAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGTTTGAAGATGCCAAGTaGGCCGCTGTTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQFEDAK*AAVTAG
Trigger: GCCGGCAGTAACAGCGGCTCACTTGGCATCTTCAAA...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCAGCACAGCCTCCCTGTaGTCCCAGCACTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASSTASL*SQHFGR
Trigger: CCTCCCAAAGTGCTGGGATCACAGGGAGGCTGTGCT...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678570.1
CDS-3UTR GCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGCCAGGCGACCACGATaGCGTGGGCCGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGARRPR*RGPRVA
Trigger: TGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGC...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp CCTCTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PLETLTHPGPFGSPPNCPPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...TGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGAAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: EPLLLPACVASLWYAWVGDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTTCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR GCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHNALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KIHGVIILQHELCWVLGLPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTSSGRP*PMALKM
Trigger: CATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGA...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTATAAATGGAACAGATaGGCAGCAGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNYKWNR*AAASPA
Trigger: AGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTATAAATGGAACAGATaGGCAGCAGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARYKWNR*AAASPA
Trigger: AGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGCCTCAGAGCCCTCCTaGACCAGGCTGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSASEPS*TRLFSP
Trigger: TGGAGAAAACAGCCTGGTGCAGGAGGGCTCTGAGGC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGCTGTTGCTGGGCCTTTaGTTCAGACCCGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWLLLGL*FRPEAG
Trigger: TCCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAG...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCCCTGCTCCTCCTGTTaGTGGGCCTTTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSPCSSC*WAFASD
Trigger: GTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTCCCTGCTCCTCCTGTTaGTGGGCCTTTGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SPPNCPPIHITSSLEHTSPCSSC*WAFASD
Trigger: GTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGG...AGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp CCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACTCATTAACACTGCCCTaGTCCTCCTGTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PAASTLQALRIGKYLEGHSLTLP*SSCCWA
Trigger: GGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAATGA...GTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGTGCTGCTGCTGTTGCTaGAGTTGCCACTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLCCCCC*SCHCRH
Trigger: GTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCA...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTGCTGCTGCTGTTGCTaGAGTTGCCACTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSCCCCC*SCHCRH
Trigger: GTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCC +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTVSRCY*RHVSHP
Trigger: GGGATGCGACACATGCCGGCAGTAACAGCGGCTCAC...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACAGCTACCATTTATTGTaGACTTACTCTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNSYHLL*TYSVQA
Trigger: GGCCTGCACAGAGTAAGTGCACAATAAATGGTAGCT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATGGTTCTCCTCCCAATTaGCCACCCATCCACATCACT +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHGSPPN*PPIHIT
Trigger: AGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACC...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAACAGCAGCTTCCACTCTaGAGGCACTTAGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKQQLPL*RHLGLE
Trigger: TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTG...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KIHGVIILQHELCWVLGLAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGACTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGCTCCTGCTCCTCGTCTaGCAGGCCCTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLLLLLV*QALPHG
Trigger: GCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAG...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTGCTCCTCCTGTTGCTaGGCCTTTGCTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSCSSCC*AFASDP
Trigger: CGGGTCTGAAGCAAAGGCCCAGCAACAGGAGGAGCA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTKAPLF*ARSLAF
Trigger: GAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCKAPLF*ARSLAF
Trigger: GAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTT...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGCTCTAGCACAGGCTaGTCCAAAAGATACATGGTG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCCSSTG*SKRYMV
Trigger: CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTACAACTGAGTTGATGTaGCTGATCCAGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVTTELM*LIQAVS
Trigger: GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAACAGGAAATGGAGGGATaGAGATCTGGATGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKQEMEG*RSGCRQ
Trigger: TTGCCTGCATCCAGATCTCCATCCCTCCATTTCCTG...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATGGACTAAGAGGGTCTTaGCATCCAGACTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHGLRGS*HPDSHF
Trigger: GAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCC...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTTCTGGAGCACACATCTaGCAATGTGGCTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSSGAHI*QCGCSV
Trigger: AACTGAACAGCCACATTGCCAGATGTGTGCTCCAGA...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CAA 72 bp AGGACAGGCTATCTGGATTCTGGCCCCAGCTCTGACTaGCAGCATAATACCTGGGCAAACCCCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RTGYLDSGPSSD*QHNTWANPLCS
Trigger: AGAACAGAGGGGGTTTGCCCAGGTATTATGCTGCAAGTCAGAGCTGGGGCCAGAATCCAGATAGCCTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469091.1
ENST00000676986.1
ENST00000678823.1
3UTR CAA 72 bp GCCTTTGCTTCAGACCCGAAGCTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTGTCTAGTGTATATGGA +
Preference number: 4 (lower is better)
Translates to: AFASDPKLELAG*TLQYRLSSVYG
Trigger: TCCATATACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTCTGAAGCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
3UTR CAA 72 bp AGGTTTCAGGTGTCTTGGTGGTATCCAAATCGGCTGTaGATTTTGGCATCCGAAGGAGTTGGGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RFQVSWWYPNRL*ILASEGVGGWP
Trigger: GGGCCAGCCCCCAACTCCTTCGGATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTATTCCCACGACATACTaGGCTCAACAACAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCIPTTY*AQQQAL
Trigger: CAGAGCCTGTTGTTGAGCTCAGTATGTCGTGGGAAT...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: HLGLESTLKATYPNLSMLREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...CAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRLCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp ACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCGGAATATTTACCTCTTaGGCCAGACACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TLKATYPNLSMLLLSLPPGIFTS*ARHLRG
Trigger: CCCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCC...GGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRLVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMLVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGAAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CCTCTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PLETLTHPGPFGSPPNCPLLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...TGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp ACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTGAGCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TAYLGKAGSVHKKSYPSEPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...CTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFHNSPA*ALLGPR
Trigger: CCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATG...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCATAATTCTCCAGCATaGGCTCTGCTGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSHNSPA*ALLGPR
Trigger: CCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCTCTGGACCTCAGTCTaGCCATCTTCATATTCTATC +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCLWTSV*PSSYSI
Trigger: GATAGAATATGAAGATGGTCAGACTGAGGTCCAGAG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTTGTGGCCCTGAGGCTTaGAGGGCCTCACCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: RIGKYLEGHLSKPLHAALCGPEA*RASPSY
Trigger: GTAAGAGGGTGAGGCCCTTCAAGCCTCAGGGCCACA...AAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATCATGGGATGCAAGGGTaGGAACTAGAAGGACGAGAA +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHHGMQG*ELEGRE
Trigger: TTCTCGTCCTTCTAGTTCTCACCCTTGCATCCCATG...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp CCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCAATAGGGCCTGCGTGAAGTTCGCAGCTTTGTCATGGTaGGCTACTTTTCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PKAGSSESILSNRACVKFAALSW*ATFLRS
Trigger: ACTCCTGAGAAAAGTAGCTCACCATGACAAAGCTGC...GAACTTCACGCAGGCCCTATTGGAGAGGATGCTCTCTGAACTGCCAGCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGCACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPACVASLWYAWVGRRSLHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GATCAGTTCAACGGTCCATCTGAGGATGTAGGTAGGCCGGATCCCGCTGATCCCCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: DQFNGPSEDVGRPDPADPQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...GGGATCAGCGGGATCCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR GCA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: RGWAVALARLDEHLHQGWSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCCTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTCCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RIGKYLEGHLSKPLHAALPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...AAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCTGTTGCTGGGCCTTTaGTTCAGACCCGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSLLLGL*FRPEAG
Trigger: TCCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTCTGTTGCTGGGCCTTTaGTTCAGACCCGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPPNCPPIHITSSLEHTSLLLGL*FRPEAG
Trigger: TCCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAG...AGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp CCTCTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PLETLTHPGPFGSPPNCPPRSCC*CCCCSC
Trigger: GCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGG...TGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCCCTCGAAGTTGCTGCTaGTGCTGTTGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTPRSCC*CCCCSC
Trigger: GCAACTGCAGCAACAGCAGCAGCAGCAACTTCGAGG...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCGCATCCCTCTGGTATaGTTGGGTTGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHRIPLV*LGWEKI
Trigger: GATCTTCTCCCAACCCAAGCATACCAGAGGGATGCG...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCGCATCCCTCTGGTATaGTTGGGTTGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSRIPLV*LGWEKI
Trigger: GATCTTCTCCCAACCCAAGCATACCAGAGGGATGCG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCC +
Preference number: 4 (lower is better)
Translates to: RIGKYLEGHLSKPLHAALVSRCY*RHVSHP
Trigger: GGGATGCGACACATGCCGGCAGTAACAGCGGCTCAC...AAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCGGTCAAAGGAGATTTTaGTTGTGTTGCTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSGQRRF*LCCCYC
Trigger: ACAATAACAGCAACACAAGCAAAATCTCCTTTGACC...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTCTAGAGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EPAISFEVEVPLYHHGSRAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...TCTAGAACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp ACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTGAGGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TAYLGKAGSVHKKSYPSEAVGRE*QRPFPF
Trigger: AAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGC...CTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATCTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GGATTGTCTTATCCATTCCCACACTGGACTCAGTTCAGTCAGGTCTTAAGCTGTGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLSYPFPHWTQFSQVLSCACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...ACAGCTTAAGACCTGACTGAACTGAGTCCAGTGTGGGAATGGATAAGACAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCACTCTGGGTATAAATaGAACAGATGCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVHSGYK*NRCAAA
Trigger: AGCTGCTGCGCATCTGTTCCATTTATACCCAGAGTG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCACTCTGGGTATAAATaGAACAGATGCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLHSGYK*NRCAAA
Trigger: AGCTGCTGCGCATCTGTTCCATTTATACCCAGAGTG...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACTCCTCCTCCTCTACCTaGTCTGGCAAGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYSSSST*SGKTSF
Trigger: GAAAGAGGTCTTGCCAGACCAGGTAGAGGAGGAGGA...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GACCCGAAGCTGGAGCTGGCTGGCTTGACGCTCCAATACAGGCTGTCTAGTGTAAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: DPKLELAGLTLQYRLSSVKAPLF*ARSLAF
Trigger: GAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTT...TACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGGTCCAAAAGATACATaGTGTCATAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRGPKDT*CHNSPA
Trigger: TGCTGGAGAATTATGACACCATGTATCTTTTGGACC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTGCTCTAGCACAGGCTaGTCCAAAAGATACATGGTG +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVCSSTG*SKRYMV
Trigger: CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCACTTGCACCAGGGATaGCCATCAGAAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSHLHQG*PSEELQ
Trigger: CTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCAAAATTCCCCTGTGGTaGACAACTGAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCKIPLW*TTELMW
Trigger: CCACATCAACTCAGTTGTCCACCACAGGGGAATTTT...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATTCAAAATTCCCCTGTaGTGGACAACTGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEFKIPL*WTTELM
Trigger: CATCAACTCAGTTGTCCACCACAGGGGAATTTTGAA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATCTGGTATGCTTGGGTTaGGAGAAGATCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHLVCLG*EKISVV
Trigger: GACCACAGAGATCTTCTCCCAACCCAAGCATACCAG...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCCCTCTGGTATGCTTaGGTTGGGAGAAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRSLWYA*VGRRSL
Trigger: CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGA...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTTCCCTCTGGTATGCTTaGGTTGGGAGAAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCSLWYA*VGRRSL
Trigger: CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGA...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACCCTCTTACCGGATaGAATTCAAGAGACTTACAT +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDEHPLTG*NSRDLH
Trigger: ATGTAAGTCTCTTGAATTCCATCCGGTAAGAGGGTG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GATCAGTTCAACGGTCCATCTGAGGATGTAGGTAGGCCGGATCCCGCTGATCCCTATCCATTCCCACACTaGACTCAGTTCAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DQFNGPSEDVGRPDPADPYPFPH*TQFSQV
Trigger: GACCTGACTGAACTGAGTCCAGTGTGGGAATGGATA...GGGATCAGCGGGATCCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CAA 72 bp TTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTaGGCATCCAGACTCCCACTTCATTCATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LDSIGGSGTKRV*ASRLPLHSFPR
Trigger: CCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
3UTR CAA 72 bp CGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATaGGAAAGTACCTTGAAGGCCACCTATCCAAACCTC +
Preference number: 4 (lower is better)
Translates to: RDQQLPLCRHLG*ESTLKATYPNL
Trigger: GAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDELCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: GSISCTRGWAVALARLDELVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTAGPAR*AQAGLN
Trigger: GTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGC...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACTCTGGACCTCAGTCTaGCCATCTTCATATTCTATC +
Preference number: 4 (lower is better)
Translates to: GAARTERTALAPGRHSSPLWTSV*PSSYSI
Trigger: GATAGAATATGAAGATGGTCAGACTGAGGTCCAGAG...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCTCTGGACCTCAGTCTaGCCATCTTCATATTCTATC +
Preference number: 4 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTLWTSV*PSSYSI
Trigger: GATAGAATATGAAGATGGTCAGACTGAGGTCCAGAG...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000484069.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCTCCTCTTGAAACTCTaGCTCATCCAGGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHLLLKL*LIQALL
Trigger: CAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGGAG...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGCCAGAGGGAGTTCGTTaGCTGACCTGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRPEGVR*LTCSST
Trigger: TGTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGG...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp CCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCAGAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: PIHITSSLEHTSGNVAVQNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...CTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCACCTCCAGCCCCTTCTTaGTTCCCACTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RFTAYLGKAGSVHKKSYPPPAPS*FPLACR
Trigger: TCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGG...TGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGTGCTGCTGCTGTTGCTaGAGTTGCCACTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRCCCCC*SCHCRH
Trigger: GTGTCGGCAGTGGCAACTGCAGCAACAGCAGCAGCA...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGCAGCAGCTTCCACTCTaGAGGCACTTAGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWQQLPL*RHLGLE
Trigger: TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTG...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp TCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCTTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: SLWSRLLRDQQLPLCRHSLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...AGAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCTGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCAATAGGGCCTGCGTGAAGTTCATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PKAGSSESILSNRACVKFIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...GAACTTCACGCAGGCCCTATTGGAGAGGATGCTCTCTGAACTGCCAGCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGACACATTCTACACGTaGGGACGGGTTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSDTFYT*GRVIPR
Trigger: GCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCTCTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCAGACACATTCTACACGTaGGGACGGGTTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: PLETLTHPGPFGSPPNCPDTFYT*GRVIPR
Trigger: GCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTC...TGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGCTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCTCCTCTACCTGGTCTaGCAAGACCTCTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSLLYLV*QDLFLL
Trigger: GAGGAGAAAGAGGTCTTGCCAGACCAGGTAGAGGAG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTCCTCCTCCTCTACCTaGTCTGGCAAGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSSSSST*SGKTSF
Trigger: GAAAGAGGTCTTGCCAGACCAGGTAGAGGAGGAGGA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGGTCCAAAAGATACATaGTGTCATAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARGPKDT*CHNSPA
Trigger: TGCTGGAGAATTATGACACCATGTATCTTTTGGACC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGATTGTCTTATCCATTCCCACACTGGACTCAGTTCAGTCAGGTCTTAAGCTGTAGTTGTACTAGGGGGTaGGCTGTTGCCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: GLSYPFPHWTQFSQVLSCSCTRG*AVALAR
Trigger: CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACT...ACAGCTTAAGACCTGACTGAACTGAGTCCAGTGTGGGAATGGATAAGACAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTTCAAAATTCCCCTGTaGTGGACAACTGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCFKIPL*WTTELM
Trigger: CATCAACTCAGTTGTCCACCACAGGGGAATTTTGAA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGTCCCTCTGGTATGCTTaGGTTGGGAGAAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWSLWYA*VGRRSL
Trigger: CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGA...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCAGTGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PIHITSSLEHTSGNVAVQCVASL*YAWVGR
Trigger: TCTCCCAACCCAAGCATACCAGAGGGATGCGACACA...CTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGACAAAACCTCAGATTTaGGAAGTATTCGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRTKPQI*EVFESQ
Trigger: TTGACTCTCGAATACTTCCCAAATCTGAGGTTTTGT...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGGGACTAAGAGGGTCTTaGCATCCAGACTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLGLRGS*HPDSHF
Trigger: GAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCC...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGGGACTAAGAGGGTCTTaGCATCCAGACTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: PFGSPPNCPPIHITSSLEGLRGS*HPDSHF
Trigger: GAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCC...CTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GATCAGTTCAACGGTCCATCTGAGGATGTAGGTAGGCCGGATCCCGCTGATCCCCACAACCTTCCAGCTTaGACATTATGGCCATTATGG +
Preference number: 4 (lower is better)
Translates to: DQFNGPSEDVGRPDPADPHNLPA*TLWPLW
Trigger: CCATAATGGCCATAATGTCCAAGCTGGAAGGTTGTG...GGGATCAGCGGGATCCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCGGAATATTTACCTCTTaGGCCAGACACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTGIFTS*ARHLRG
Trigger: CCCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCC...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATACTGCTCCTCTTCGTATaGTACCAGCAGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYILLLFV*YQQFSG
Trigger: GCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp ACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACAGGGGCTGCCAGAACTaGGAGAACGGCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: TRFTAYLGKAGSVHKKSYRGCQN*ENGFGT
Trigger: GGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCT...GTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTCCAATAGGGCCTGCGTaGAGTTCTGGGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFPIGPA*SSGSAG
Trigger: GCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGG...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCTGTGGTGGACAACTaGGTTGATGTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTPVVDN*VDVADP
Trigger: TGGATCAGCCACATCAACTCAGTTGTCCACCACAGG...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTCTCTGGACCTCAGTCTaGCCATCTTCATATTCTATC +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCLWTSV*PSSYSI
Trigger: GATAGAATATGAAGATGGTCAGACTGAGGTCCAGAG...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000484069.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTTGGGATGCTGGGATGTaGGCTTTCAGAGGTGGAATA +
Preference number: 4 (lower is better)
Translates to: SPRPAASTLQALRIGKYLWDAGM*AFRGGI
Trigger: TATTCCACCTCTGAAAGCTCACATCCCAGCATCCCA...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCAAGCAACTCTGGGGGTaGATGTCAAATTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSKQLWG*MSNCSR
Trigger: CCTGCTGCAATTTGACATTCACCCCCAGAGTTGCTT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGTCGAGTACAGGAGGCTaGATCTTGGGGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLSSTGG*ILGEGP
Trigger: TGGCCCCTCCCCCAAGATTCAGCCTCCTGTACTCGA...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCTCAAATGCCTCCTCTTaGAACTCTGACTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSSNASS*NSDSSR
Trigger: CCTGGATGAGTCAGAGTTTCAAGAGGAGGCATTTGA...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATTCAAATGCCTCCTCTTaGAACTCTGACTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHSNASS*NSDSSR
Trigger: CCTGGATGAGTCAGAGTTTCAAGAGGAGGCATTTGA...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACCACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCTCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: VVSGSISCTRGWAVALARSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCGTGAAGTTCTGGGAGTaGAGGCCCCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSVKFWE*RPLSRG
Trigger: GCCCCTGCTCAGGGGCCTGCACTCCCAGAACTTCAC...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGCTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp TTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCTCCAATAGGGCCTaGGTGAAGTTCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LESTLKATYPNLSMLLLSLSNRA*VKFWEC
Trigger: GCACTCCCAGAACTTCACGCAGGCCCTATTGGAGAG...TGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTTATAAATGGAACAGATaGGCAGCAGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCYKWNR*AAASPA
Trigger: AGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATA...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTGCAGTGGGGGACTCTTaGCCTGTAGAGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTAVGDS*PVEKGP
Trigger: GGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGC...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTCTTCTGAGCTAACCTaGCATGCAGAGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSSSELT*HAEPCK
Trigger: TTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGAAGA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
CDS-3UTR GCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCCGCATCCCTCTGGTATaGTTGGGTTGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASRIPLV*LGWEKI
Trigger: GATCTTCTCCCAACCCAAGCATACCAGAGGGATGCG...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCCAGCCTCCCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFQPPVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTG...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp GATAGAGGGAAGGAGACACTAAGGGAAGTAGACACGGCAACACAAAACCTCAGAGGTCACCGAGTGGGATaGTGGGATGTGAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: DRGKETLREVDTATQNLRGHRVG*WDVSFQ
Trigger: CTGAAAGCTCACATCCCAGCATCCCACTCGGTGACC...TCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTTAGTGTCTCCTTCCCTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGAGCAAGGTCAAGGGATaGAGGAAATGGAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLSKVKG*RKWRDG
Trigger: TCCATCCCTCCATTTCCTGCATCCCTTGACCTTGCT...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGCCTTCAGCTCAGCGTaGTACCCTCACTCCGAACCG +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGAFSSA*YPHSEP
Trigger: CGGTTCGGAGTGAGGGTAGCACGCTGAGCTGAAGGC...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: TLKATYPNLSMLLLSLPPLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...GGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGACCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCAGCTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: PIHITSSLEHTSGNVAVQLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...CTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCGCCTGCGTGAAGTTCTaGGAGTGCAGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSACVKF*ECRPLS
Trigger: GCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGC...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp TTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCAGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LESTLKATYPNLSMLLLSADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...TGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GATAGAGGGAAGGAGACACTAAGGGAAGTAGACACGGCAACACAAAACCTCAGAGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: DRGKETLREVDTATQNLRADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...TCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTTAGTGTCTCCTTCCCTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 4 (lower is better)
Translates to: SPRPAASTLQALRIGKYLHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGA +
Preference number: 4 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGLLASH*PAENRR
Trigger: TCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAG...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACCACTCTGGGTATAAATaGAACAGATGCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYHSGYK*NRCAAA
Trigger: AGCTGCTGCGCATCTGTTCCATTTATACCCAGAGTG...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GATAGAGGGAAGGAGACACTAAGGGAAGTAGACACGGCAACACAAAACCTCAGAGAAGCTGGAGCTGGCTaGCTTGACGCTCCAATACAG +
Preference number: 4 (lower is better)
Translates to: DRGKETLREVDTATQNLREAGAG*LDAPIQ
Trigger: CTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTC...TCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTTAGTGTCTCCTTCCCTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCTCCTCCTCCTCTACCTaGTCTGGCAAGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASSSSST*SGKTSF
Trigger: GAAAGAGGTCTTGCCAGACCAGGTAGAGGAGGAGGA...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGGTCCAAAAGATACATaGTGTCATAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTGPKDT*CHNSPA
Trigger: TGCTGGAGAATTATGACACCATGTATCTTTTGGACC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCCTGGTATGCTTGGGTTaGGAGAAGATCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFLVCLG*EKISVV
Trigger: GACCACAGAGATCTTCTCCCAACCCAAGCATACCAG...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGATCCGCAGGGCTATGTaGTTTTCTCCAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KIHGVIILQHELCWVLGLIRRAM*FSPAEL
Trigger: GAGCTCTGCTGGAGAAAACCACATAGCCCTGCGGAT...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCAAGGGCTAGACAGATTTaGGTTTCAGCACTTTATAGG +
Preference number: 4 (lower is better)
Translates to: GAARTERTALAPGRHSSPRARQI*VSALYR
Trigger: CCTATAAAGTGCTGAAACCCAAATCTGTCTAGCCCT...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGACACATCTGGCAATGTaGCTGTTCAGTTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWTHLAM*LFSSNS
Trigger: GGAGTTGGAACTGAACAGCCACATTGCCAGATGTGT...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGTCTGGAGCACACATCTaGCAATGTGGCTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWSGAHI*QCGCSV
Trigger: AACTGAACAGCCACATTGCCAGATGTGTGCTCCAGA...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATACATCACTTCTAGTCTaGAGCACACATCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHTSLLV*STHLAM
Trigger: CATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGT...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CAA 72 bp TCTGTGCAGGCCACTGTGCTAAGCACTCTAGGGGGATaGTCTTATCCATTCCCACACTGGACTCAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SVQATVLSTLGG*SYPFPHWTQFS
Trigger: ACTGAACTGAGTCCAGTGTGGGAATGGATAAGACAATCCCCCTAGAGTGCTTAGCACAGTGGCCTGCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CAA 72 bp CTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTaGAAGGCCACCTATCCAAACCTCTCCATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPLCRHLGLEST*KATYPNLSMLL
Trigger: GAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVLCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVLVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCAATAGGGCCTGCGTGAAGTTCCTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: PKAGSSESILSNRACVKFLVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...GAACTTCACGCAGGCCCTATTGGAGAGGATGCTCTCTGAACTGCCAGCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR TCA 90 bp CCTCTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCAATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: PLETLTHPGPFGSPPNCPIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...TGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: SPPNCPPIHITSSLEHTSIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...AGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCACAGCACTGCTGGGAATaGGAGAGCAGAGCACGGTTC +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSQHCWE*ESRARF
Trigger: GAACCGTGCTCTGCTCTCTCATTCCCAGCAGTGCTG...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAAGTCTTGCCTTGACTaGCTTTGTCTACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SRLLRDQQLPLCRHLGLEKSCLD*LCLQSH
Trigger: GTGGCTTTGTAGACAAAGTCAGTCAAGGCAAGACTT...TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAAAGTCTTGCCTTGACTaGCTTTGTCTACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLAKSCLD*LCLQSH
Trigger: GTGGCTTTGTAGACAAAGTCAGTCAAGGCAAGACTT...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATAAGTCTTGCCTTGACTaGCTTTGTCTACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHKSCLD*LCLQSH
Trigger: GTGGCTTTGTAGACAAAGTCAGTCAAGGCAAGACTT...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCTCCTCTTGAAACTCTaGCTCATCCAGGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTLLLKL*LIQALL
Trigger: CAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGGAG...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGATTCTTTCTCCTGCTTaGATTGTTCAAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PACVASLWYAWVGRRSLWILSPA*IVQMPP
Trigger: AGGAGGCATTTGAACAATTCAAGCAGGAGAAAGAAT...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCATTGAATCCCAAAACTTaGAACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLALNPKT*NQPGQH
Trigger: ATGTTGCCCAGGCTGGTTTCAAGTTTTGGGATTCAA...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678570.1
CDS-3UTR GCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCCACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: AASTLQALRIGKYLEGHLSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGGAAAGGCAGGATCTGTaGACAAGAAATCGTACCCAA +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQERQDL*TRNRTQ
Trigger: TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTC...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTCAGCCTCCCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGQPPVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTG...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGGTCAAAGGAGATTTTaGTTGTGTTGCTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTGQRRF*LCCCYC
Trigger: ACAATAACAGCAACACAAGCAAAATCTCCTTTGACC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGATTGTCTTATCCATTCCCACACTGGACTCAGTTCAGTCAGGTCTTAAGCTGTTTGGTCACAGTAAGGTaGCTGTGGGCCATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GLSYPFPHWTQFSQVLSCLVTVR*LWAIQG
Trigger: CCCTTGGATGGCCCACAGGCACCTTACTGTGACCAA...ACAGCTTAAGACCTGACTGAACTGAGTCCAGTGTGGGAATGGATAAGACAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp ACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTGAGGGTTCTCCTCCCAATTaGCCACCCATCCACATCACT +
Preference number: 4 (lower is better)
Translates to: TAYLGKAGSVHKKSYPSEGSPPN*PPIHIT
Trigger: AGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACC...CTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TCTATCCCTTCCCTGAACTCCTCCAACTCCCAGGTCTCTCTCAGGCTGTTCTCCGTCGGGATCCACATCTaGAGACTATACAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: SIPSLNSSNSQVSLRLFSVGIHI*RLYKDK
Trigger: TTTGTCTTTGTATAGTCTGCAGATGTGGATCCCGAC...GGAGAACAGCCTGAGAGAGACCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp GATAGAGGGAAGGAGACACTAAGGGAAGTAGACACGGCAACACAAAACCTCAGAACGTCTGAGCTAACCTaGCATGCAGAGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DRGKETLREVDTATQNLRTSELT*HAEPCK
Trigger: TTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGACGT...TCTGAGGTTTTGTGTTGCCGTGTCTACTTCCCTTAGTGTCTCCTTCCCTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: DSLLIWERQDLCTRNRTQADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCACTCTGGGTATAAATaGAACAGATGCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSHSGYK*NRCAAA
Trigger: AGCTGCTGCGCATCTGTTCCATTTATACCCAGAGTG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGTGCTCTAGCACAGGCTaGTCCAAAAGATACATGGTG +
Preference number: 4 (lower is better)
Translates to: PFGSPPNCPPIHITSSLECSSTG*SKRYMV
Trigger: CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCA...CTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATTCAAAATTCCCCTGTaGTGGACAACTGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRFKIPL*WTTELM
Trigger: CATCAACTCAGTTGTCCACCACAGGGGAATTTTGAA...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCTGGTATGCTTGGGTTaGGAGAAGATCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTLVCLG*EKISVV
Trigger: GACCACAGAGATCTTCTCCCAACCCAAGCATACCAG...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGTGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HLGLESTLKATYPNLSMLCVASL*YAWVGR
Trigger: TCTCCCAACCCAAGCATACCAGAGGGATGCGACACA...CAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp TTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCAATCCGCAGGGCTATGTaGTTTTCTCCAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LESTLKATYPNLSMLLLSIRRAM*FSPAEL
Trigger: GAGCTCTGCTGGAGAAAACCACATAGCCCTGCGGAT...TGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCAAGGGCTAGACAGATTTaGGTTTCAGCACTTTATAGG +
Preference number: 4 (lower is better)
Translates to: NTCTRDGHQKSCRPVLSPRARQI*VSALYR
Trigger: CCTATAAAGTGCTGAAACCCAAATCTGTCTAGCCCT...TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTGACACATCTGGCAATGTaGCTGTTCAGTTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: AHIWQCGCSVPTPGSLALTHLAM*LFSSNS
Trigger: GGAGTTGGAACTGAACAGCCACATTGCCAGATGTGT...CAAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGACATCACTTCTAGTCTaGAGCACACATCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQTSLLV*STHLAM
Trigger: CATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGT...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGACATCACTTCTAGTCTaGAGCACACATCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWTSLLV*STHLAM
Trigger: CATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGT...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
3UTR CAA 72 bp AAGACATTCAAAATTCCCCTGTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: KTFKIPLWWTTE*MWLIQAVSQVV
Trigger: GACAACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTTGAATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
3UTR CAA 72 bp TTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTaGTCACTCCCTCCCTCCCATTATATACACATGCCA +
Preference number: 4 (lower is better)
Translates to: LKATYPNLSMLL*SLPPSHYIHMP
Trigger: TGGCATGTGTATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGACTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRLCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATAGGAATATTTACCTCTTaGGCCAGACACTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIGIFTS*ARHLRG
Trigger: CCCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCC...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTCTAGAAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: EPAISFEVEVPLYHHGSRRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...TCTAGAACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTCCATCGCACGTCTTCTaGGCTAACCTGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTPSHVF*ANLPCR
Trigger: TCTGCATGGCAGGTTAGCTCAGAAGACGTGCGATGG...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCCTGGAAGTCTTGCCTTaGCTGACTTTGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTLEVLP*LTLSTK
Trigger: CTTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAG...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTCTGGAAGTCTTGCCTTaGCTGACTTTGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPLEVLP*LTLSTK
Trigger: CTTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAG...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTCTGGAAGTCTTGCCTTaGCTGACTTTGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: SPPNCPPIHITSSLEHTSLEVLP*LTLSTK
Trigger: CTTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAG...AGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCTCTTGAAACTCTaGCTCATCCAGGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LESTLKATYPNLSMLLLSLLLKL*LIQALL
Trigger: CAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGGAG...TGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGAATTCTTTCTCCTGCTTaGATTGTTCAAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRILSPA*IVQMPP
Trigger: AGGAGGCATTTGAACAATTCAAGCAGGAGAAAGAAT...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCATACTGTGTCATAGAATaGTTGCATCCAGGCATTATT +
Preference number: 4 (lower is better)
Translates to: GAARTERTALAPGRHSSPYCVIE*LHPGII
Trigger: AATAATGCCTGGATGCAATCATTCTATGACACAGTA...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACGTTTTCTTCCATAGCCTTCAGAGCTaGAAGCCCCAAACAGAGATT +
Preference number: 4 (lower is better)
Translates to: ELRERLWHQDVIQVHVFFHSLQS*KPQTEI
Trigger: AATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATG...GAAGAAAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp ACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTGAGTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: TAYLGKAGSVHKKSYPSELSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...CTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCTATAAATGGAACAGATaGGCAGCAGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFYKWNR*AAASPA
Trigger: AGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATA...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTATAAATGGAACAGATaGGCAGCAGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSYKWNR*AAASPA
Trigger: AGCAGGAGAAGCTGCTGCGCATCTGTTCCATTTATA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR GCA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGGGATGGAGATCTGGATaGAGGCAAAGAGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRGWRSG*RQRADV
Trigger: GACATCTGCTCTTTGCCTGCATCCAGATCTCCATCC...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCAACCCAACAGAGGGATaGAGGGTCAAAGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSNPTEG*RVKGDF
Trigger: AAAATCTCCTTTGACCCTGCATCCCTCTGTTGGGTT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTGTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: AHIWQCGCSVPTPGSLALLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...CAAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: SPRPAASTLQALRIGKYLLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCATGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLICLQLLQALQFLALRSWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATATGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCTCTTGAAACTCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCAATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PLETLTHPGPFGSPPNCPIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...TGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAGACACATTCTACACGTaGGGACGGGTTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: RFTAYLGKAGSVHKKSYPDTFYT*GRVIPR
Trigger: GCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTC...TGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCTGATCCCCAAGGCTaGCAGTTCAGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLADPQG*QFREHP
Trigger: AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGC...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: DSLLIWERQDLCTRNRTQVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCGGTCCAAAAGATACATaGTGTCATAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TLKATYPNLSMLLLSLPPGPKDT*CHNSPA
Trigger: TGCTGGAGAATTATGACACCATGTATCTTTTGGACC...GGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCACACTTGCACCAGGGATaGCCATCAGAAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSHLHQG*PSEELQ
Trigger: CTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTG...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCAAAATTCCCCTGTGGTaGACAACTGAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSKIPLW*TTELMW
Trigger: CCACATCAACTCAGTTGTCCACCACAGGGGAATTTT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATAGATATGGCCAAAGGATaGGCAAAGCTGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIDMAKG*AKLKVL
Trigger: CAGCACCTTCAGCTTTGCCCATCCTTTGGCCATATC...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTTTTGCAAGTCAGATATaGCCAAAGGATGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPRPAASTLQALRIGKYLFASQI*PKDGQS
Trigger: GCTTTGCCCATCCTTTGGCCATATCTGACTTGCAAA...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTATGCCATGTTCCTTCTaGACTTTGAAACTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTMPCSF*TLKLAL
Trigger: TAAAGCAAGTTTCAAAGTCCAGAAGGAACATGGCAT...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCAGCAGTTCTCGGGCTCTTTCATATAGCTCTTTATGACTCAGGGCCTTTTTGCGTGTCAGTCTCAACATaGCTGCAACTGGGGATCCTT +
Preference number: 4 (lower is better)
Translates to: PAVLGLFHIALYDSGPFCVSVST*LQLGIL
Trigger: AAGGATCCCCAGTTGCAGCCATGTTGAGACTGACAC...GCAAAAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp GGGGCTGCCAGAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCAACATTATGGCCATTATaGACATGTTACATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GAARTERTALAPGRHSSPTLWPL*TCYIAA
Trigger: TGCAGCAATGTAACATGTCCATAATGGCCATAATGT...TGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 72 bp GTTTTGGGGCCAGTTTATGGCCAGACTTTGGGAGGCTaGCTCCCAACATGTCTCCCTTCTTTGATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: VLGPVYGQTLGG*LPTCLPSLICK
Trigger: TTTGCAAATCAAAGAAGGGAGACATGTTGGGAGCAAGCCTCCCAAAGTCTGGCCATAAACTGGCCCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCACTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLALCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSLCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHLCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACCTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCT +
Preference number: 4 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYLCLPL*DKIHKP
Trigger: AGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAG...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp TCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAACTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: SRLLRDQQLPLCRHLGLELVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSLVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCCTGGAAGTCTTGCCTTaGCTGACTTTGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASLEVLP*LTLSTK
Trigger: CTTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAG...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LESTLKATYPNLSMLLLSHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...TGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTCCTCTTCGCTGCCTTTaGTGTCTCCATCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTPLRCL*CLHRPL
Trigger: TAAAGGCCGATGGAGACAGCAAAGGCAGCGAAGAGG...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAATCCACCTCTTCGCTaGCTTTGCTGTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTNPPLR*LCCLHR
Trigger: CCGATGGAGACAGCAAAGGCAGCGAAGAGGTGGATT...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLNALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGAACGCCCTTGAGCTCTaGCAGGACACATTCTACACG +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGNALEL*QDTFYT
Trigger: CGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLPACVASLWYAWVGRRSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGCCAAGGTGTCAGTCTTaGATGTTGAGGGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLPRCQS*MLRVPA
Trigger: GGCTGGAACCCTCAACATGCAAGACTGACACCTTGG...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGTTCTCCTCCCAATTaGCCACCCATCCACATCACT +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGGSPPN*PPIHIT
Trigger: AGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACC...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GGACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTCAGCAGCTTCCACTCTaGAGGCACTTAGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: GLDSLLIWERQDLCTRNRQQLPL*RHLGLE
Trigger: TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTG...ACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp CCAGCAGTTCTCGGGCTCTTTCATATAGCTCTTTATGACTCAGGGCCTTTTTGCCATAGGAATCGTTTGTaGAGCACCTCTGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PAVLGLFHIALYDSGPFCHRNRL*STSACS
Trigger: AGAACAGGCAGAGGTGCTGCACAAACGATTCCTATG...GCAAAAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTTTGTGGGTCAACTCATaGCGAAGGTCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTLWVNS*RRSTIQ
Trigger: TTGGATTGTTGACCTTCGCCATGAGTTGACCCACAA...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAATGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: DSLLIWERQDLCTRNRTQWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGACACATTCTACACGTaGGGACGGGTTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLDTFYT*GRVIPR
Trigger: GCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTC...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCACTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: RFTAYLGKAGSVHKKSYPLRERL*HQDVIQ
Trigger: TTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAG...TGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGTCCAGTCTTGGTGTTaGCCACGATCAGTTCAACGG +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGVQSWC*PRSVQR
Trigger: CCGTTGAACTGATCGTGGCCAACACCAAGACTGGAC...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp CACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: HLGLESTLKATYPNLSMLKAPLF*ARSLAF
Trigger: GAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTT...CAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCATGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSCVASL*YAWVGR
Trigger: TCTCCCAACCCAAGCATACCAGAGGGATGCGACACA...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGTGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLCVASL*YAWVGR
Trigger: TCTCCCAACCCAAGCATACCAGAGGGATGCGACACA...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGACTAAGAGGGTCTTaGCATCCAGACTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSGLRGS*HPDSHF
Trigger: GAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCC...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTCTGGTTTCTGTTCTGTaGTGTCATCAACAACAATGT +
Preference number: 4 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPLVSVL*CHQQQC
Trigger: ACATTGTTGTTGATGACATCACAGAACAGAAACCAG...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGAGGGCCTTTTTGCAATaGGAATCCACCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLRAFLQ*ESTSSL
Trigger: CAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCT...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGAAGCAACTCTGGGGGTaGATGTCAAATTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGKQLWG*MSNCSR
Trigger: CCTGCTGCAATTTGACATTCACCCCCAGAGTTGCTT...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGATTCTTTCTCCTGCTTaGATTGTTCAAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLILSPA*IVQMPP
Trigger: AGGAGGCATTTGAACAATTCAAGCAGGAGAAAGAAT...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTTTAAGCGCGTACCGCTaGAACTTATGGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTLSAYR*NLWSSQ
Trigger: CTGTGACGACCATAAGTTGCAGCGGTACGCGCTTAA...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATAGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCAGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: LLICLQLLQALQFLALRSDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp AGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCATCCAGCACCGTAAACTaGTCCTCTTCGTATGATACC +
Preference number: 4 (lower is better)
Translates to: RFTAYLGKAGSVHKKSYPSSTVN*SSSYDT
Trigger: GGTATCATACGAAGAGGAGCAGTTTACGGTGCTGGA...TGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTTGGGGCATTTTCTTGTaGGTCAACTCATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTWGIFL*VNSWRR
Trigger: CCTTCGCCATGAGTTGACCCACAAGAAAATGCCCCA...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGTGAGCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: TAYLGKAGSVHKKSYPSEPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...CTCACTTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp ACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCATTCCGTCCAGTCTTaGTGTTGGCCACGATCAGTT +
Preference number: 4 (lower is better)
Translates to: TRFTAYLGKAGSVHKKSYHSVQS*CWPRSV
Trigger: AACTGATCGTGGCCAACACCAAGACTGGACGGAATG...GTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGGTCCAAAAGATACATaGTGTCATAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSGPKDT*CHNSPA
Trigger: TGCTGGAGAATTATGACACCATGTATCTTTTGGACC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCGGTCCAAAAGATACATaGTGTCATAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTGPKDT*CHNSPA
Trigger: TGCTGGAGAATTATGACACCATGTATCTTTTGGACC...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAACAACTGAGTTGATGTaGCTGATCCAGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSTTELM*LIQAVS
Trigger: GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGT...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCTTCAAAATTCCCCTGTaGTGGACAACTGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASFKIPL*WTTELM
Trigger: CATCAACTCAGTTGTCCACCACAGGGGAATTTTGAA...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCACTGGTATGCTTGGGTTaGGAGAAGATCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSLVCLG*EKISVV
Trigger: GACCACAGAGATCTTCTCCCAACCCAAGCATACCAG...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTACATCACTTCTAGTCTaGAGCACACATCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: RIGKYLEGHLSKPLHAALTSLLV*STHLAM
Trigger: CATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGT...AAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCATTTCAGGTGTCTTGGTaGTATCCAAATCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLICLQLLQALQFLALRSFQVSW*YPNRLL
Trigger: CAACAGCCGATTTGGATACCACCAAGACACCTGAAA...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTCCGGAGTCTCTTCCTTaGCATCTGGCTCATGATAAG +
Preference number: 4 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFPESLP*HLAHDK
Trigger: CTTATCATGAGCCAGATGCCAAGGAAGAGACTCCGG...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 72 bp CCTTGGCATCTGGCTCATGATAAGGTTTCAGGTGTCTaGGTGGTATCCAAATCGGCTGTTGATTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: PWHLAHDKVSGV*VVSKSAVDFGI
Trigger: GATGCCAAAATCAACAGCCGATTTGGATACCACCAAGACACCTGAAACCTTATCATGAGCCAGATGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 72 bp GTTACATTGCTGCAGAGATTGTATTTATGGCCAGTTTaGGGGCCAGTTTATGGCCAGACTTTGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VTLLQRLYLWPV*GPVYGQTLGGL
Trigger: CAAGCCTCCCAAAGTCTGGCCATAAACTGGCCCCAAAACTGGCCATAAATACAATCTCTGCAGCAATGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
3UTR CAA 72 bp CTTGCCCTCATCCCCATAAACCCACAACCTTCCAGCTaGGACATTATGGCCATTATGGACATGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: LALIPINPQPSS*DIMAIMDMLHC
Trigger: GCAATGTAACATGTCCATAATGGCCATAATGTCCAAGCTGGAAGGTTGTGGGTTTATGGGGATGAGGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GCACAGTCATTGAAATCACAGAGCTTCCAAGTGTTTTTATCCATTTTAATAGGTAGGGAGTTCGTTGCCTaGCCTGCTCCTCCACACCGT +
Preference number: 4 (lower is better)
Translates to: AQSLKSQSFQVFLSILIGREFVA*PAPPHR
Trigger: ACGGTGTGGAGGAGCAGGTCAGGCAACGAACTCCCT...ACCTATTAAAATGGATAAAAACACTTGGAAGCTCTGTGATTTCAATGACTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCTGTAGACTACTCTTTTaGGATGTTTTGATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASCRLLF*DVLMGR
Trigger: CCTTCCCATCAAAACATCTCAAAAGAGTAGTCTACA...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR TCA 90 bp GGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTATTCTTTCTCCTGCTTaGATTGTTCAAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKYLEGHLSKPLHAALVTILSPA*IVQMPP
Trigger: AGGAGGCATTTGAACAATTCAAGCAGGAGAAAGAAT...AGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGCACAAACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLHKPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTTTGTG...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGCAAAGTAGCAGCCTCTaGGGCAGTCATTTATATGGG +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGQSSSL*GSHLYG
Trigger: CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTG...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GGATTGTCTTATCCATTCCCACACTGGACTCAGTTCAGTCAGGTCTTAAGCTGTGACTCAGGGCCTTTTTaGAATGAGAATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GLSYPFPHWTQFSQVLSCDSGPF*NENPPL
Trigger: AAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTC...ACAGCTTAAGACCTGACTGAACTGAGTCCAGTGTGGGAATGGATAAGACAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp CTGGAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: LEHTSGNVAVQFQLLEVLSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...CAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SPRPAASTLQALRIGKYLSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAAGAAAGGCAGGATCTGTaGACAAGAAATCGTACCCAA +
Preference number: 4 (lower is better)
Translates to: DSLLIWERQDLCTRNRTQERQDL*TRNRTQ
Trigger: TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTC...TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GAACTGAGAGAACGGCTTTGGCACCAGGACGTCATTCAAGTCCACGTTTTCTTCGCATTAAGGTCAGTGTaGCTGGGATGCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: ELRERLWHQDVIQVHVFFALRSV*LGCFKY
Trigger: ATATTTAAAGCATCCCAGGCACACTGACCTTAATGC...GAAGAAAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp GAAAAGCATCCAGCACAGCCTCCCGTAAACTGCTCCTCTTCGTATGATACCAGCGACATGTTACATTGCTaGAGAGATTGTATTTATGGC +
Preference number: 4 (lower is better)
Translates to: EKHPAQPPVNCSSSYDTSDMLHC*RDCIYG
Trigger: GCCATAAATACAATCTCTGCAGCAATGTAACATGTC...GCTGGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTGTGCTGGATGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGTGCTCTAGCACAGGCTaGTCCAAAAGATACATGGTG +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGCSSTG*SKRYMV
Trigger: CACCATGTATCTTTTGGACCAGCCTGTGCTAGAGCA...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCACAAAACCTCAGATTTaGGAAGTATTCGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: IHGVIILQHELCWVLGLTTKPQI*EVFESQ
Trigger: TTGACTCTCGAATACTTCCCAAATCTGAGGTTTTGT...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CCA 90 bp ACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACACACATCTGGCAATGTaGCTGTTCAGTTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: TRFTAYLGKAGSVHKKSYTHLAM*LFSSNS
Trigger: GGAGTTGGAACTGAACAGCCACATTGCCAGATGTGT...GTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCATCTGGAGCACACATCTaGCAATGTGGCTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSSGAHI*QCGCSV
Trigger: AACTGAACAGCCACATTGCCAGATGTGTGCTCCAGA...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGTCTGGAGCACACATCTaGCAATGTGGCTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGSGAHI*QCGCSV
Trigger: AACTGAACAGCCACATTGCCAGATGTGTGCTCCAGA...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp GCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTGATGCCATGTTCCTTCTaGACTTTGAAACTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: AHIWQCGCSVPTPGSLALMPCSF*TLKLAL
Trigger: TAAAGCAAGTTTCAAAGTCCAGAAGGAACATGGCAT...CAAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCATGCCATGTTCCTTCTaGACTTTGAAACTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFMPCSF*TLKLAL
Trigger: TAAAGCAAGTTTCAAAGTCCAGAAGGAACATGGCAT...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCTTTGGGGCCAGTTTATaGCCAGACTTTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSFGASL*PDFGRL
Trigger: AAGCCTCCCAAAGTCTGGCCATAAACTGGCCCCAAA...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp GCACAGTCATTGAAATCACAGAGCTTCCAAGTGTTTTTATCCATTTTAATAGGTCCTCTATCCCTTCCCTaGACTCCTCCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQSLKSQSFQVFLSILIGPLSLP*TPPTPR
Trigger: CCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGAGG...ACCTATTAAAATGGATAAAAACACTTGGAAGCTCTGTGATTTCAATGACTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp ACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACAAGTCTTGCCTTGACTaGCTTTGTCTACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TRFTAYLGKAGSVHKKSYKSCLD*LCLQSH
Trigger: GTGGCTTTGTAGACAAAGTCAGTCAAGGCAAGACTT...GTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp ATATTGCTCAAGAAAGCAAGAAGGGAATCAGGCGCTAAAGGCTTCCATGATTATTCTTCTGAGCTAACCTaGCATGCAGAGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ILLKKARRESGAKGFHDYSSELT*HAEPCK
Trigger: TTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGAAGA...ATAATCATGGAAGCCTTTAGCGCCTGATTCCCTTCTTGCTTTCTTGAGCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR GCA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGAAAGGCAGGATCTGTaGACAAGAAATCGTACCCAA +
Preference number: 4 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLERQDL*TRNRTQ
Trigger: TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTC...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGAACCCAACAGAGGGATaGAGGGTCAAAGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGNPTEG*RVKGDF
Trigger: AAAATCTCCTTTGACCCTGCATCCCTCTGTTGGGTT...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR GCA 90 bp GCACAGTCATTGAAATCACAGAGCTTCCAAGTGTTTTTATCCATTTTAATAGGTGGGCCAGGTGTTCCTTaGCCTCATCCCCATAAACCC +
Preference number: 4 (lower is better)
Translates to: AQSLKSQSFQVFLSILIGGPGVP*PHPHKP
Trigger: GGGTTTATGGGGATGAGGGCAAGGAACACCTGGCCC...ACCTATTAAAATGGATAAAAACACTTGGAAGCTCTGTGATTTCAATGACTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAATCATCCTGAGGCTCTaGTTTCTGTTCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSIILRL*FLFCDV
Trigger: GACATCACAGAACAGAAACCAGAGCCTCAGGATGAT...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CCA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFPTVQM*GQGSHH
Trigger: ATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGG...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATGGAGGGATGGAGATCTaGATGCAGGCAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHGGMEI*MQAKSR
Trigger: TCTGCTCTTTGCCTGCATCCAGATCTCCATCCCTCC...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
3UTR CAA 72 bp AGACAACCACAGGTATTTACCAGTGCAATATTCAGTTaGACCATAGAACCCAGGGTGGATAGGGTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RQPQVFTSAIFS*TIEPRVDRVKE
Trigger: CTCCTTTACCCTATCCACCCTGGGTTCTATGGTCAAACTGAATATTGCACTGGTAAATACCTGTGGTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp CTGAGGCTCTGGTTTCTGTTCTGTGATGTCATCAACAACAATGTTCTTATCTTCATCGGCCTTTACATCTaGCTCCGTACTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: LRLWFLFCDVINNNVLIFIGLYI*LRTFPI
Trigger: GATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGAT...GAAGATAAGAACATTGTTGTTGATGACATCACAGAACAGAAACCAGAGCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCTCCGGAATATTTACCTaGCCAATGCCATGCCATAGA +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSSGIFT*PMPCHR
Trigger: TCTATGGCATGGCATTGGTCAGGTAAATATTCCGGA...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATATCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYISSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR GCA 90 bp GAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGGCATCCACAGGTATTTACCAGTaGAATATTCAGTTTGACCAT +
Preference number: 4 (lower is better)
Translates to: ERLLDSIGGSGTKRVLASTGIYQ*NIQFDH
Trigger: ATGGTCAAACTGAATATTGCACTGGTAAATACCTGT...GGATGCCAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp ATATTGCTCAAGAAAGCAAGAAGGGAATCAGGCGCTAAAGGCTTCCATGATTATAAGGGATGCAGGAAATaGAGGGATGGAGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: ILLKKARRESGAKGFHDYKGCRK*RDGDLD
Trigger: ATCCAGATCTCCATCCCTCCATTTCCTGCATCCCTT...ATAATCATGGAAGCCTTTAGCGCCTGATTCCCTTCTTGCTTTCTTGAGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CCA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATAATGCCATGTTCCTTCTaGACTTTGAAACTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIMPCSF*TLKLAL
Trigger: TAAAGCAAGTTTCAAAGTCCAGAAGGAACATGGCAT...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR TCA 90 bp AATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: NAIRVKERLLDSIGGSGTSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...AGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR TCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCATTACCAGCCCTTATTaGAGGAATACTCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSITSPY*RNTHGS
Trigger: ACTGCCATGAGTATTCCTTCAATAAGGGCTGGTAAT...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCTATTTACCTGACCAATaGCATGCCATAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSYLPDQ*HAIEQS
Trigger: AGACTGCTCTATGGCATGGCATTGGTCAGGTAAATA...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp GAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTCTAGATCAGTGTGCCTGGGATaGTTTAAATATTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: EPAISFEVEVPLYHHGSRSVCLG*FKYLFF
Trigger: AAAGAACAAATATTTAAAGCATCCCAGGCACACTGA...TCTAGAACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATACACATCTGGCAATGTaGCTGTTCAGTTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHTHLAM*LFSSNS
Trigger: GGAGTTGGAACTGAACAGCCACATTGCCAGATGTGT...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCTCATATAGCTCTTTATaGCTCAGGGCCTTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSSYSSL*LRAFLQ
Trigger: TTGCAAAAAGGCCCTGAGTCATAAAGAGCTATATGA...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR GCA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTTCTTCATATTCTATCTaGAAAGCTGCCAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFSSYSI*KAANCS
Trigger: TGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGA...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CCA 90 bp CCAATCCTGTTTCCAAATAGGTTTTTGAGGGCAGTATGCCTCAATTATAGGAGCAGGGAAATGAAAGGATaGGCCAAATTAATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PILFPNRFLRAVCLNYRSREMKG*AKLIAA
Trigger: TGCTGCAATTAATTTGGCCCATCCTTTCATTTCCCT...GCTCCTATAATTGAGGCATACTGCCCTCAAAAACCTATTTGGAAACAGGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR TCA 90 bp ATATTGCTCAAGAAAGCAAGAAGGGAATCAGGCGCTAAAGGCTTCCATGATTATTGTAGACTACTCTTTTaGGATGTTTTGATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ILLKKARRESGAKGFHDYCRLLF*DVLMGR
Trigger: CCTTCCCATCAAAACATCTCAAAAGAGTAGTCTACA...ATAATCATGGAAGCCTTTAGCGCCTGATTCCCTTCTTGCTTTCTTGAGCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR TCA 90 bp CTGAGGCTCTGGTTTCTGTTCTGTGATGTCATCAACAACAATGTTCTTATCTTCTTAAATTATTCATTGTaGCTGGTTGTCCCGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LRLWFLFCDVINNNVLIFLNYSL*LVVPLS
Trigger: GGAAAGCGGGACAACCAGTCACAATGAATAATTTAA...GAAGATAAGAACATTGTTGTTGATGACATCACAGAACAGAAACCAGAGCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS TCA 90 bp CCTGGGAACCTAGACCTGGCCCGGCCCCGGATTCCCACGACATACTaGGCTCAACAACAGGCTCTGTGCCGCGCCGCTCCGCACAGCCTT +
Preference number: 5 (lower is better)
Translates to: PGNLDLARPRIPTTY*AQQQALCRAAPHSL
Trigger: AAGGCTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGTTGAGCTCAGTATGTCGTGGGAATCCGGGGCCGGGCCAGGTCTAGGTTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS TCA 90 bp TCAGCTACCCGGGATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SATRDPKELGAGPAR*AQAGLNHPGPVKGG
Trigger: GCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCCGGGTAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000678074.1
ENST00000678173.1
ENST00000678705.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679277.1
CDS CCA 90 bp TCTCCAGCAGAGCTCAGCTACCCGGGATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: SPAELSYPGSEGVGG*PSKVSPSRTQPSGA
Trigger: GGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCCGGGTAGCTGAGCTCTGCTGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000678074.1
ENST00000678173.1
ENST00000678705.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679277.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRLGGGL*PWHGWM
Trigger: CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS TCA 90 bp CGTCACAGAACAGATAAACCGTCACCTGGTCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGCCGTGGGCCGAGAGTGGCAACGACC +
Preference number: 5 (lower is better)
Translates to: RHRTDKPSPGPTRPC*ARRPRCRGPRVATT
Trigger: GGTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGGACCAGGTGACGGTTTATCTGTTCTGTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS TCA 90 bp CACTCTGCAGGCAATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HSAGNPKELGAGPAR*AQAGLNHPGPVKGG
Trigger: GCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCCTGCAGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677986.1
CDS TCA 90 bp CAGGCGCTAAAGGATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QALKDPKELGAGPAR*AQAGLNHPGPVKGG
Trigger: GCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCTTTAGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678547.1
CDS CCA 90 bp ACCTGGTCCCACTCGGCCCTGCTGAGCCAGGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGACCCTTTCCCTTTAACGCACTTTCCG +
Preference number: 5 (lower is better)
Translates to: TWSHSALLSQATTMP*AESGNDPFPLTHFP
Trigger: CGGAAAGTGCGTTAAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGGACCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGCCAGAGGGAGTTCGTaGCCTGACCTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWARGSS*PDLLLH
Trigger: GTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGGC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGATGATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWDDPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCATC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGGCAGTGGGGGACTCTaGCCCTGTAGAGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWGSGGL*PCRERP
Trigger: GGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNLGGGL*PWHGWM
Trigger: CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDELGGGL*PWHGWM
Trigger: CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS TCA 90 bp ACCAAGGACAGCAATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TKDSNPKELGAGPAR*AQAGLNHPGPVKGG
Trigger: GCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCTGTCCTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS TCA 90 bp ATGAGTGGCCGAAATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: MSGRNPKELGAGPAR*AQAGLNHPGPVKGG
Trigger: GCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTTCGGCCACTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677154.1
CDS CCA 90 bp CTCGGCCCTGCTGAGCCAGGCGACCACGATGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTTAACGCACTTTCCGTACCACGCACT +
Preference number: 5 (lower is better)
Translates to: LGPAEPGDHDAVGRE*QRPFPFNALSVPRT
Trigger: AGTGCGTGGTACGGAAAGTGCGTTAAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAGCAGGGCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRDDPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCATC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCCTGTTGCTGGGCCTTaGCTTCAGACCCGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWPVAGP*LQTRSW
Trigger: CCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAGG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGCCCTGCTCCTCCTGTaGCTGGGCCTTTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWALLLL*LGLCFR
Trigger: TCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGGCAGTGGGGGACTCTaGCCCTGTAGAGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRGSGGL*PCRERP
Trigger: GGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCTGCTGTTGCTGCAGTaGCCACTGCCGACACCACAG +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWLLLLQ*PLPTPQ
Trigger: CTGTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTTGCTGCTGCTGCTGTaGCTGCAGTTGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWLLLLL*LQLPLP
Trigger: CGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRSCRPV*SPCSCP
Trigger: GGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCT...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTLGGGL*PWHGWM
Trigger: CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS TCA 90 bp GGCTTTGAAGATGATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GFEDDPKELGAGPAR*AQAGLNHPGPVKGG
Trigger: GCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCATCTTCAAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000677834.1
ENST00000677969.1
CDS CCA 90 bp GAAGGTGCTGATGATGAGTGGCCGAAATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: EGADDEWPKSEGVGG*PSKVSPSRTQPSGA
Trigger: GGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTTCGGCCACTCATCATCAGCACCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677154.1
CDS CCA 90 bp GCAAGAAGGGAATCAGGCGCTAAAGGATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: ARRESGAKGSEGVGG*PSKVSPSRTQPSGA
Trigger: GGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCTTTAGCGCCTGATTCCCTTCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678547.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGGATGATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARDDPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCATC...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRLELAG*TLQYRL
Trigger: CAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCCTGTTGCTGGGCCTTaGCTTCAGACCCGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMPVAGP*LQTRSW
Trigger: CCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAGG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGCCCTGCTCCTCCTGTaGCTGGGCCTTTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRALLLL*LGLCFR
Trigger: TCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACGGCAGTGGGGGACTCTaGCCCTGTAGAGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNGSGGL*PCRERP
Trigger: GGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCC...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARSCRPV*SPCSCP
Trigger: GGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCGGCTGGATGAACACTaGCACCAGGGATGGCCATCA +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWRLDEH*HQGWPS
Trigger: TGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: PSEPLLLPACVASLWYAWREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTG +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDELELAG*TLQYRL
Trigger: CAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTG +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNLELAG*TLQYRL
Trigger: CAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARLELAG*TLQYRL
Trigger: CAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCTGTTGCTGGGCCTTaGCTTCAGACCCGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPVAGP*LQTRSW
Trigger: CCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGCCCTGCTCCTCCTGTaGCTGGGCCTTTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDEALLLL*LGLCFR
Trigger: TCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGC...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTGCTGTTGCTGCAGTaGCCACTGCCGACACCACAG +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDELLLLQ*PLPTPQ
Trigger: CTGTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CAAGAGCCAGCAGAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAAGGCACGTTCCTAGGTaGAAGAGCAAGAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: QEPAEQGRGWGEAPAMLARHVPR*KSKSQQ
Trigger: CTGCTGGCTCTTGCTCTTCAACCTAGGAACGTGCCT...TGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS GCA 90 bp GAACAGATGCGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATGCTGAGCAAAGGGAGGGATGGGGTA +
Preference number: 5 (lower is better)
Translates to: EQMRSSFSCSSSGRP*PMALKMLSKGRDGV
Trigger: TACCCCATCCCTCCCTTTGCTCAGCATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCGCATCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000677154.1
ENST00000678547.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS GCA 90 bp AAGCTCTTGGGCCCCATCTACTGGTCAGCTGCGGAATTGCAGGGCTaGGCAACTACCCATTCCCAGTTGTTCCCTACCACCCAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: KLLGPIYWSAAELQG*ATTHSQLFPTTQWG
Trigger: GCCCCACTGGGTGGTAGGGAACAACTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS CCA 90 bp TTAACGCACTTTCCGTACCACGCACTCCACACGAGATCCATCCCCTaGGAACCTAGACCTGGCCCGGCCCCGGATTCCCACGACATACTG +
Preference number: 5 (lower is better)
Translates to: LTHFPYHALHTRSIP*EPRPGPAPDSHDIL
Trigger: CAGTATGTCGTGGGAATCCGGGGCCGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGTGTGGAGTGCGTGGTACGGAAAGTGCGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS-3UTR CAA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGATGATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVDDPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCATC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCCCTGCCCCATGGCTTaGAAGATGATCCGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRPCPMA*KMIRRS
Trigger: ACTCCTTCGGATCATCTTCAAAGCCATGGGGCAGGG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTCTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTG +
Preference number: 5 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSLELAG*TLQYRL
Trigger: CAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAG...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCCTGTTGCTGGGCCTTaGCTTCAGACCCGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCPVAGP*LQTRSW
Trigger: CCAGCTTCGGGTCTGAAGCAAAGGCCCAGCAACAGG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCCCTGCTCCTCCTGTaGCTGGGCCTTTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCALLLL*LGLCFR
Trigger: TCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GACCCGAAGCTGGAGCTGGCTGGCTTGACGCTCCAATACAGGCTGTCTAGTGTAGGCAGTGGGGGACTCTaGCCCTGTAGAGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: DPKLELAGLTLQYRLSSVGSGGL*PCRERP
Trigger: GGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCC...TACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGTGTCAGTCTTGCATGTaGAGGGTTCCAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMCQSCM*RVPAAA
Trigger: AGCAGCGGCTGGAACCCTCAACATGCAAGACTGACA...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGTGTCAGTCTTGCATGTaGAGGGTTCCAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRCQSCM*RVPAAA
Trigger: AGCAGCGGCTGGAACCCTCAACATGCAAGACTGACA...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCTGCTGTTGCTGCAGTaGCCACTGCCGACACCACAG +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCLLLLQ*PLPTPQ
Trigger: CTGTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTTGCTGCTGCTGCTGTaGCTGCAGTTGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCLLLLL*LQLPLP
Trigger: CGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACAGAAGGCCCTCGAAGTaGCTGCTGCTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNRRPSK*LLLLLL
Trigger: CAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAAGAAGGCCCTCGAAGTaGCTGCTGCTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDERRPSK*LLLLLL
Trigger: CAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGGCCCTCGAAGTaGCTGCTGCTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: EPLLLPACVASLWYAWVGRRPSK*LLLLLL
Trigger: CAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCT...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVSCRPV*SPCSCP
Trigger: GGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS CCA 90 bp CCCTCCAGCTCACCTGATTTAGGGAAGCTCTTGGGCCCCATCTACTaGTCAGCTGCGGAATTGCAGGGCTGCGCAACTACCCATTCCCAG +
Preference number: 5 (lower is better)
Translates to: PSSSPDLGKLLGPIY*SAAELQGCATTHSQ
Trigger: CTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTTCCCTAAATCAGGTGAGCTGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677986.1
ENST00000678848.1
CDS CCA 90 bp GAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGAGCATTCCGTCCTGAGAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: EAEQLNSLQPLLASH*PAENRRAFRPEREE
Trigger: CTCTTCTCTCTCAGGACGGAATGCTCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678074.1
ENST00000678705.1
ENST00000678848.1
ENST00000679277.1
CDS CCA 90 bp TCTGAGCTAACCTGCCATGCAGAGCCCTGCAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: SELTCHAEPCKAPLF*ARSLAFSAVGDSCP
Trigger: GGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678173.1
CDS CCA 90 bp CCTGAGCTAACCTGCCATGCAGAGCCCTGCAAAGCTCCTCTTTTCTaGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: PELTCHAEPCKAPLF*ARSLAFSAVGDSCP
Trigger: AGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677969.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDEAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: KATYPNLSMLLLSLPPSHREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCTGCCCCATGGCTTaGAAGATGATCCGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDEPCPMA*KMIRRS
Trigger: ACTCCTTCGGATCATCTTCAAAGCCATGGGGCAGGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCCCTGCCCCATGGCTTaGAAGATGATCCGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARPCPMA*KMIRRS
Trigger: ACTCCTTCGGATCATCTTCAAAGCCATGGGGCAGGG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAGTCCTTCTCCTCTTCCTaGACATCATTAACACTGCCC +
Preference number: 5 (lower is better)
Translates to: SKVEAGVRPQRCWQRWLQSFSSS*TSLTLP
Trigger: GGGCAGTGTTAATGATGTCAAGGAAGAGGAGAAGGA...CTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCAAGGTGTCAGTCTaGCATGTTGAGGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDEPKVSV*HVEGSS
Trigger: GCTGGAACCCTCAACATGCAAGACTGACACCTTGGG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACCCCAAGGTGTCAGTCTaGCATGTTGAGGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNPKVSV*HVEGSS
Trigger: GCTGGAACCCTCAACATGCAAGACTGACACCTTGGG...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCTGCTGTTGCTGCAGTaGCCACTGCCGACACCACAG +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVLLLLQ*PLPTPQ
Trigger: CTGTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTTGCTGCTGCTGCTGTaGCTGCAGTTGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVLLLLL*LQLPLP
Trigger: CGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCGGCTGGATGAACACTaGCACCAGGGATGGCCATCA +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCRLDEH*HQGWPS
Trigger: TGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTCTCTCCATGCTGCTCTaGTCACTCCCTCCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSLSMLL*SLPPSH
Trigger: ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAG...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS GCA 90 bp AAGACTGGAGAACAGGGCCTTATAGAAACTCGACAAAGGAAGAGGTaGAGCGCCACCAGCACGCAGGCAAAAGGGCCGAACCCGCCACCT +
Preference number: 5 (lower is better)
Translates to: KTGEQGLIETRQRKR*SATSTQAKGPNPPP
Trigger: AGGTGGCGGGTTCGGCCCTTTTGCCTGCGTGCTGGTGGCGCTGCACCTCTTCCTTTGTCGAGTTTCTATAAGGCCCTGTTCTCCAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CCA 90 bp GCCCCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTaGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: APSEPLLLPACVASL*YAWVGRRSLWSRLL
Trigger: GAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678173.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGCGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRRNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGCGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMRNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCAAGTGAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: PSEPLLLPACVASLWYAWRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...CCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCCTGCCCCATGGCTTaGAAGATGATCCGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPCPMA*KMIRRS
Trigger: ACTCCTTCGGATCATCTTCAAAGCCATGGGGCAGGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
CDS-3UTR CAA 90 bp AGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGGATGGTCCTTCTCCTCTTCCTaGACATCATTAACACTGCCC +
Preference number: 5 (lower is better)
Translates to: RGWAVALARLDEHLHQGWSFSSS*TSLTLP
Trigger: GGGCAGTGTTAATGATGTCAAGGAAGAGGAGAAGGA...CCATCCCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGTCAGTCTTGCATGTaGAGGGTTCCAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCCQSCM*RVPAAA
Trigger: AGCAGCGGCTGGAACCCTCAACATGCAAGACTGACA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCCCAAGGTGTCAGTCTaGCATGTTGAGGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCPKVSV*HVEGSS
Trigger: GCTGGAACCCTCAACATGCAAGACTGACACCTTGGG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTCCCAAGGTGTCAGTCTaGCATGTTGAGGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTPKVSV*HVEGSS
Trigger: GCTGGAACCCTCAACATGCAAGACTGACACCTTGGG...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTCTGCTGTTGCTGCAGTaGCCACTGCCGACACCACAG +
Preference number: 5 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCLLLLQ*PLPTPQ
Trigger: CTGTGGTGTCGGCAGTGGCAACTGCAGCAACAGCAG...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTAGAAGGCCCTCGAAGTaGCTGCTGCTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVRRPSK*LLLLLL
Trigger: CAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCGGCTGGATGAACACTaGCACCAGGGATGGCCATCA +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVRLDEH*HQGWPS
Trigger: TGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGCGGCTGGATGAACACTaGCACCAGGGATGGCCATCA +
Preference number: 5 (lower is better)
Translates to: PACVASLWYAWVGRRSLWRLDEH*HQGWPS
Trigger: TGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCG...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: GASVVLGGGLLPWHGWMNWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...GTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GAGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAAGCAGCTACCATTTATaGTGCACTTACTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: EQGRGWGEAPAMLAEVAPSSYHL*CTYSVQ
Trigger: CTGCACAGAGTAAGTGCACAATAAATGGTAGCTGCT...TGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp CAGCTCAGGCCCAAGGTGTCAGTCTTGCATGTTGAGGGTTCCAGCCGCTGCTCTGGGACTAAGAGGGTCTaGGCATCCAGACTCCCACTT +
Preference number: 5 (lower is better)
Translates to: QLRPKVSVLHVEGSSRCSGTKRV*ASRLPL
Trigger: AAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCCC...AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AAGGTGAGCCCAAGCAGGACTCAACCATCCGGGGCCAGTCAAGGGAGGCGGAGCTATTTATGGCCAGTTTaGGGGCCAGTTTATGGCCAG +
Preference number: 5 (lower is better)
Translates to: KVSPSRTQPSGASQGRRSYLWPV*GPVYGQ
Trigger: CTGGCCATAAACTGGCCCCAAAACTGGCCATAAATA...GCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS GCA 90 bp ATCCAGCACAGCCTCCCTGTTCTCGCATGTAACGCCCTTGAGCTCTaGCAGGACACATTCTACACGTGGGGACGGGTTATTCCACGCCTT +
Preference number: 5 (lower is better)
Translates to: IQHSLPVLACNALEL*QDTFYTWGRVIPRL
Trigger: AAGGCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGAGAACAGGGAGGCTGTGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000676986.1
ENST00000677087.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679261.1
ENST00000679277.1
CDS GCA 90 bp CCCCTTACTTTCCATTCCGCTAACGGGATTAGCGCAAGAGATGGCTaGCGCGTTCCCCCAGGCATTTGGGAGAGGGACAACTTTAGGCGA +
Preference number: 5 (lower is better)
Translates to: PLTFHSANGISARDG*RVPPGIWERDNFRR
Trigger: TCGCCTAAAGTTGTCCCTCTCCCAAATGCCTGGGGGAACGCGGCAGCCATCTCTTGCGCTAATCCCGTTAGCGGAATGGAAAGTAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS-3UTR CAA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGCCAGAGGGAGTTCGTaGCCTGACCTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSARGSS*PDLLLH
Trigger: GTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGGC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCGCCAGAGGGAGTTCGTaGCCTGACCTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: IHGVIILQHELCWVLGLTARGSS*PDLLLH
Trigger: GTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGGC...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTAGCCAGAGGGAGTTCGTaGCCTGACCTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: AASTLQALRIGKYLEGHLARGSS*PDLLLH
Trigger: GTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGGC...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARRNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDERNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GACCCGAAGCTGGAGCTGGCTGGCTTGACGCTCCAATACAGGCTGTCTAGTGTACAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: DPKLELAGLTLQYRLSSVQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...TACACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: PACVASLWYAWVGRRSLWRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...CCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GATCAGTTCAACGGTCCATCTGAGGATGTAGGTAGGCCGGATCCCGCTGATCCCCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: DQFNGPSEDVGRPDPADPRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...GGGATCAGCGGGATCCGGCCTACCTACATCCTCAGATGGACCGTTGAACTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000677056.1
CDS-3UTR CAA 90 bp GCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTGAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: AHIWQCGCSVPTPGSLALREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...CAAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCACCAGGTCCTTCTCCTCTTCCTaGACATCATTAACACTGCCC +
Preference number: 5 (lower is better)
Translates to: VLGGGLLPWHGWMNTCTRSFSSS*TSLTLP
Trigger: GGGCAGTGTTAATGATGTCAAGGAAGAGGAGAAGGA...CCTGGTGCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTGTCAGTCTTGCATGTaGAGGGTTCCAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVCQSCM*RVPAAA
Trigger: AGCAGCGGCTGGAACCCTCAACATGCAAGACTGACA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GATCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCCCAAGGTGTCAGTCTaGCATGTTGAGGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: DLCGPDFSETSSFHSAGTPKVSV*HVEGSS
Trigger: GCTGGAACCCTCAACATGCAAGACTGACACCTTGGG...AGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGTTGCTGCTGCTGCTGTaGCTGCAGTTGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWLLLLL*LQLPLP
Trigger: CGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAA...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSSCRPV*SPCSCP
Trigger: GGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: IHGVIILQHELCWVLGLTSCRPV*SPCSCP
Trigger: GGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCT...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGCTAGGGGGTGGGCTGTaGCCCTGGCACGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRLGGGL*PWHGWM
Trigger: CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAG...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATTCCAGCTCAGGGGTTaGCAAGTCAGATATGGCCAA +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDEFQLRG*QVRYGQ
Trigger: TTGGCCATATCTGACTTGCAAACCCCTGAGCTGGAA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp AGCAAGGTAGAGGCTGGGGTGAGGCCCCAGCGATGCTGGCAGAGGTGGCTCCAGGGGTCAAAGGAGATTTaGCTTGTGTTGCTGTTATTG +
Preference number: 5 (lower is better)
Translates to: SKVEAGVRPQRCWQRWLQGSKEI*LVLLLL
Trigger: CAATAACAGCAACACAAGCAAAATCTCCTTTGACCC...CTGGAGCCACCTCTGCCAGCATCGCTGGGGCCTCACCCCAGCCTCTACCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTGGGACTAAGAGGGTCTaGGCATCCAGACTCCCACTT +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVGTKRV*ASRLPL
Trigger: AAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCCC...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGCTCATCCAGGCCCTTTaGGTTCTCCTCCCAATTGCC +
Preference number: 5 (lower is better)
Translates to: LPACVASLWYAWVGRRSLLIQAL*VLLPIA
Trigger: GGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAG...CAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GGTAGGCCGGATCCCGCTGATCCCCAAGGCTGGCAGTTCAGAGAGCATCCTCTCCCACAACCTTCCAGCTaGGACATTATGGCCATTATG +
Preference number: 5 (lower is better)
Translates to: GRPDPADPQGWQFREHPLPQPSS*DIMAIM
Trigger: CATAATGGCCATAATGTCCAAGCTGGAAGGTTGTGG...GAGAGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGATCCGGCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS CCA 90 bp TGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTaGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: CVASLWYAWVGRRSL*SRLLRDQQLPLCRQ
Trigger: TTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469091.1
ENST00000677986.1
CDS CCA 90 bp ATTTCTCCAGCACCTGATTTAGGGAAGCTCTTGGGCCCCATCTACTaGTCAGCTGCGGAATTGCAGGGCTGCGCAACTACCCATTCCCAG +
Preference number: 5 (lower is better)
Translates to: ISPAPDLGKLLGPIY*SAAELQGCATTHSQ
Trigger: CTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTTCCCTAAATCAGGTGCTGGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678705.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDEIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: TLKATYPNLSMLLLSLPPQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...GGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp AAGATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: KIHGVIILQHELCWVLGLREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...CAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCGCCCTGCTCCTCCTGTaGCTGGGCCTTTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSALLLL*LGLCFR
Trigger: TCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGC...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGTCCTTCTCCTCTTCCTaGACATCATTAACACTGCCC +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARSFSSS*TSLTLP
Trigger: GGGCAGTGTTAATGATGTCAAGGAAGAGGAGAAGGA...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAATCCTTCTCCTCTTCCTaGACATCATTAACACTGCCC +
Preference number: 5 (lower is better)
Translates to: GSISCTRGWAVALARLDESFSSS*TSLTLP
Trigger: GGGCAGTGTTAATGATGTCAAGGAAGAGGAGAAGGA...TTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCTTGCTGCTGCTGCTGTaGCTGCAGTTGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSLLLLL*LQLPLP
Trigger: CGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAA...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ATACATGGTGTCATAATTCTCCAGCATGAGCTCTGCTGGGTCCTCGGTCTGACCTTGCTGCTGCTGCTGTaGCTGCAGTTGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: IHGVIILQHELCWVLGLTLLLLL*LQLPLP
Trigger: CGGCAGTGGCAACTGCAGCAACAGCAGCAGCAGCAA...GGTCAGACCGAGGACCCAGCAGAGCTCATGCTGGAGAATTATGACACCATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCTCTGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCTTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SLWSRLLRDQQLPLCRHSWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...AGAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CAA 90 bp CAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAAGATCACTTTAGAGTaGAGATGGGGACTGAGACGA +
Preference number: 5 (lower is better)
Translates to: QGASVVLGGGLLPWHGWMKITLE*RWGLRR
Trigger: TCGTCTCAGTCCCCATCTCAACTCTAAAGTGATCTT...CATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTTGGTTCTCCTCCCAATaGCCCACCCATCCACATCAC +
Preference number: 5 (lower is better)
Translates to: CRHVSHPSGMLGLGEDLCWFSSQ*PTHPHH
Trigger: GTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCA...ACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTCTAGATGGCATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: EPAISFEVEVPLYHHGSRWHPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGCCA...TCTAGAACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp AACCATCCGGGGCCAGTCAAGGGAGGCGGAGCAGTTGAACAGCCTCCAGCCCCTCGCTCAGGATTTTGTTaGTGGCTTAAGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: NHPGPVKGGGAVEQPPAPRSGFC*WLKNAF
Trigger: AAAGGCATTCTTAAGCCACAAACAAAATCCTGAGCG...AGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS TCA 90 bp CACCCCAGCTGTTTCCACCCAGGAATCAGAACCCTAAGGGTGCAGTaGGCCCCCAGAACCCTACCTTCATATTCTATCTGCAAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: HPSCFHPGIRTLRVQ*APRTLPSYSICKAA
Trigger: GGCAGCTTTGCAGATAGAATATGAAGGTAGGGTTCTGGGGGCTCACTGCACCCTTAGGGTTCTGATTCCTGGGTGGAAACAGCTGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678602.1
CDS CCA 90 bp CAGGGCTGCGCAACTACCCATTCCCAGTTGTTCCCTACCACCCAGTaGGGCAGATTATCCGCAAACTTCATCATCTGTTCCCTTCCATCG +
Preference number: 5 (lower is better)
Translates to: QGCATTHSQLFPTTQ*GRLSANFIICSLPS
Trigger: CGATGGAAGGGAACAGATGATGAAGTTTGCGGATAATCTGCCCCACTGGGTGGTAGGGAACAACTGGGAATGGGTAGTTGCGCAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS-3UTR CAA 90 bp CCAGCAGTTCTCGGGCTCTTTCATATAGCTCTTTATGACTCAGGGCCTTTTTGCGCCAGAGGGAGTTCGTaGCCTGACCTGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PAVLGLFHIALYDSGPFCARGSS*PDLLLH
Trigger: GTGGAGGAGCAGGTCAGGCAACGAACTCCCTCTGGC...GCAAAAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp AACACTTGCACCAGGGATGGCCATCAGAAGAGCTGCAGGCCAGTTTTGAGCCCAACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: NTCTRDGHQKSCRPVLSPTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...TGGGCTCAAAACTGGCCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCTATCCCTTCCCTGAACTCCTCCAACTCCCAGGTCTCTCTCAGGCTGTTCTCCACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: SIPSLNSSNSQVSLRLFSTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...GGAGAACAGCCTGAGAGAGACCTGGGAGTTGGAGGAGTTCAGGGAAGGGATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp CTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGAACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: LLLPACVASLWYAWVGRRTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...TCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLAAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CTGCTAATTTGTCTGCAGCTCCTTCAAGCACTCCAGTTCCTGGCATTAAGGTCAAGGGAGGCGGAGCAGTaGAACAGCCTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LLICLQLLQALQFLALRSREAEQ*NSLQPL
Trigger: AAGGGGCTGGAGGCTGTTCAACTGCTCCGCCTCCCT...TGACCTTAATGCCAGGAACTGGAGTGCTTGAAGGAGCTGCAGACAAATTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp CCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACTGTCAGTCTTGCATGTaGAGGGTTCCAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: PAASTLQALRIGKYLEGHCQSCM*RVPAAA
Trigger: AGCAGCGGCTGGAACCCTCAACATGCAAGACTGACA...GTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp ATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGAGAAGATCTCTGTGGTCCAGTGTCAGTCTTGCATGTaGAGGGTTCCAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: MCRIPLVCLGWEKISVVQCQSCM*RVPAAA
Trigger: AGCAGCGGCTGGAACCCTCAACATGCAAGACTGACA...CTGGACCACAGAGATCTTCTCCCAACCCAAGCATACCAGAGGGATGCGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTAGAAGGCCCTCGAAGTaGCTGCTGCTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPRRPSK*LLLLLL
Trigger: CAGCAACAGCAGCAGCAGCAACTTCGAGGGCCTTCT...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGAGCTGCAGGCCAGTTTaGAGCCCATGCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRSCRPV*SPCSCP
Trigger: GGGGCAGCTGCATGGGCTCAAAACTGGCCTGCAGCT...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp CACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCCGGCTGGATGAACACTaGCACCAGGGATGGCCATCA +
Preference number: 5 (lower is better)
Translates to: HPSTSLLVWSTHLAMWLFRLDEH*HQGWPS
Trigger: TGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCG...GAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp TGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAAATCCCTCTGGTATGCTaGGGTTGGGAGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: WARSLAFSAVGDSCPVEKIPLVC*GWEKIS
Trigger: AGAGATCTTCTCCCAACCCAAGCATACCAGAGGGAT...TTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTTGTCTCAGGGAGCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGAGTGCAATATTCAGTTaGACCATAGAACCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VVSGSISCTRGWAVALARSAIFS*TIEPRV
Trigger: CACCCTGGGTTCTATGGTCAAACTGAATATTGCACT...CCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGCTCCCTGAGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTTTTACTGAGGCCTGTTaGGTGCCTAGACTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVFTEAC*VPRLVW
Trigger: CCACACAAGTCTAGGCACCAAACAGGCCTCAGTAAA...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GAGCCGCTGTTACTGCCGGCATGTGTCGCATCCCTCTGGTATGCTTGGGTTGGGCCTGGAAGTCTTGCCTaGACTGACTTTGTCTACAAA +
Preference number: 5 (lower is better)
Translates to: EPLLLPACVASLWYAWVGPGSLA*TDFVYK
Trigger: TTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAGG...CCCAACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCATCCAGGCCCTTTaGGTTCTCCTCCCAATTGCC +
Preference number: 5 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSLIQAL*VLLPIA
Trigger: GGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAG...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTCATCCAGGCCCTTTaGGTTCTCCTCCCAATTGCC +
Preference number: 5 (lower is better)
Translates to: PAASTLQALRIGKYLEGHLIQAL*VLLPIA
Trigger: GGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAG...GTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATGTGGCTGTTCAGCTCTCCATGCTGCTCTaGTCACTCCCTCCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: PIHITSSLEHTSGNVAVQLSMLL*SLPPSH
Trigger: ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAG...CTGAACAGCCACATTGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTACTCTCCATGCTGCTCTaGTCACTCCCTCCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: AASTLQALRIGKYLEGHLLSMLL*SLPPSH
Trigger: ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAG...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATAAGCAATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYISNPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCT...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCACGGGATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSRDPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCCG...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CAA 90 bp ACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCCGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: TLKATYPNLSMLLLSLPPRNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...GGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCAGGTTATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: PLWWTTELMWLIQAVSQVIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...AACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: SPRPAASTLQALRIGKYLQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp TCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: SRLLRDQQLPLCRHLGLETERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...TTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: ALLVLLPIAHPSTSLLVWTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...CCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp TCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: SPRPAASTLQALRIGKYLRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...AAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGGCCCTGCTCCTCCTGTaGCTGGGCCTTTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRALLLL*LGLCFR
Trigger: TCTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGC...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCCCCAAGGTGTCAGTCTaGCATGTTGAGGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSPKVSV*HVEGSS
Trigger: GCTGGAACCCTCAACATGCAAGACTGACACCTTGGG...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGTGGTGGACAACTGAGTaGATGTGGCTGATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWWWTTE*MWLIQA
Trigger: AGCCTGGATCAGCCACATCAACTCAGTTGTCCACCA...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTGGGACTAAGAGGGTCTaGGCATCCAGACTCCCACTT +
Preference number: 5 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPGTKRV*ASRLPL
Trigger: AAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCCC...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp ACTGCTGGGAATGAGAGAGCAGAGCACGGTTCAATTCAACGACATTTACTGAGGCCCTGCCCCATGGCTTaGAAGATGCCAAGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: TAGNERAEHGSIQRHLLRPCPMA*KMPSEP
Trigger: CGGCTCACTTGGCATCTTCAAAGCCATGGGGCAGGG...CCTCAGTAAATGTCGTTGAATTGAACCGTGCTCTGCTCTCTCATTCCCAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTAGCAATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GLDSLLIWERQDLCTRNRSNPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCT...ACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS TCA 90 bp TTATCCCTTGTAAGTCGGCTCCCAACTCAATCTTACCAACTGGACTaGGGCGCCCCACTCAAACACTGTCTTGCAGGCAAGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSLVSRLPTQSYQLD*GAPLKHCLAGKTSS
Trigger: GGAGGAAGTCTTGCCTGCAAGACAGTGTTTGAGTGGGGCGCCTCAGTCCAGTTGGTAAGATTGAGTTGGGAGCCGACTTACAAGGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS TCA 90 bp TATCAGGTCAGCAGTAGAAGCCACTGCCAGAGGGAGTTCGTTGCCTaGCCTAAAGGGTCACAGTCCAGCACCATCATAAAGAGCCCTTAC +
Preference number: 5 (lower is better)
Translates to: YQVSSRSHCQREFVA*PKGSQSSTIIKSPY
Trigger: GTAAGGGCTCTTTATGATGGTGCTGGACTGTGACCCTTTAGGTCAGGCAACGAACTCCCTCTGGCAGTGGCTTCTACTGCTGACCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS-3UTR CAA 90 bp CCAGCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: PAASTLQALRIGKYLEGHRNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...GTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGCAGTGGGGGACTCTaGCCCTGTAGAGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSGSGGL*PCRERP
Trigger: GGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCC...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCATCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTGGGTCAAAGGAGATTTaGCTTGTGTTGCTGTTATTG +
Preference number: 5 (lower is better)
Translates to: ASVVLGGGLLPWHGWMNTGSKEI*LVLLLL
Trigger: CAATAACAGCAACACAAGCAAAATCTCCTTTGACCC...AGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp AGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGAAGATCACTTTAGAGTaGAGATGGGGACTGAGACGA +
Preference number: 5 (lower is better)
Translates to: SSSFLGQKPSILGSGGLLKITLE*RWGLRR
Trigger: TCGTCTCAGTCCCCATCTCAACTCTAAAGTGATCTT...CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACTTTACTGAGGCCTGTTaGGTGCCTAGACTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYFTEAC*VPRLVW
Trigger: CCACACAAGTCTAGGCACCAAACAGGCCTCAGTAAA...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACAGCAATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: TRFTAYLGKAGSVHKKSYSNPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCT...GTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS TCA 90 bp CAAGCCACTTCATACCCCAACACTCCAGGGTTTGAACTTGGTCTCTaGACTTCCAGACCTGCCTCTGAAAGGCAGTGTAGTAGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: QATSYPNTPGFELGL*TSRPASERQCSRAD
Trigger: GTCTGCTCTACTACACTGCCTTTCAGAGGCAGGTCTGGAAGTTCAGAGACCAAGTTCAAACCCTGGAGTGTTGGGGTATGAAGTGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000677154.1
ENST00000678547.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS CCA 90 bp CAGGCATTTGGGAGAGGGACAACTTTAGGCGACTTAGGGGAAGACTaGAGAACAGGGCCTTATAGAAACTCGACAAAGGAAGAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QAFGRGTTLGDLGED*RTGPYRNSTKEEVQ
Trigger: CTGCACCTCTTCCTTTGTCGAGTTTCTATAAGGCCCTGTTCTCCAGTCTTCCCCTAAGTCGCCTAAAGTTGTCCCTCTCCCAAATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS-3UTR CAA 90 bp TACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: YLEGHLSKPLHAALVTPSIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...GGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGCACACATCTGGCAATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: LPIAHPSTSLLVWSTHLAIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...TGCCAGATGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATACAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp TTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGTCATCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: LESTLKATYPNLSMLLLSSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...TGACAAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp AGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: RIGKYLEGHLSKPLHAALAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...AAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CCAGCAGTTCTCGGGCTCTTTCATATAGCTCTTTATGACTCAGGGCCTTTTTGCGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: PAVLGLFHIALYDSGPFCAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...GCAAAAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp GTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTTGCTGGAGCTGGCTGGCTaGACGCTCCAATACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VKERLLDSIGGSGTKRVLLELAG*TLQYRL
Trigger: CAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAG...CAAGACCCTCTTAGTCCCTGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GCAGCTTCCACTCTGCAGGCACTTAGGATTGGAAAGTACCTTGAAGGCCACCTAATCCCTCTGGTATGCTaGGGTTGGGAGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: AASTLQALRIGKYLEGHLIPLVC*GWEKIS
Trigger: AGAGATCTTCTCCCAACCCAAGCATACCAGAGGGAT...TAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGAGTGGAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCATTACATCCGAAGGAGTaGGGGGCTGGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSLHPKE*GAGPAR
Trigger: CCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGTAA...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp CCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCACTTCTAGTCTGGAGAGCACTCTAGGGGGATaGTCTTATCCATTCCCACAC +
Preference number: 5 (lower is better)
Translates to: PFGSPPNCPPIHITSSLESTLGG*SYPFPH
Trigger: GTGTGGGAATGGATAAGACAATCCCCCTAGAGTGCT...CTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp ACTAAGAGGGTCTTGGCATCCAGACTCCCACTTCATTCATTCCCCAGGCACTGGTCAAATTGCAGCAGGTaGAGGAGTAAGAGGGTAGTG +
Preference number: 5 (lower is better)
Translates to: TKRVLASRLPLHSFPRHWSNCSR*RSKRVV
Trigger: CACTACCCTCTTACTCCTCAACCTGCTGCAATTTGA...CCAGTGCCTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TTGCATGTTGAGGGTTCCAGCCGCTGCTCTAGCACAGGCTGGTCCAAAAGATACTCAAATTGCAGCAGGTaGAGGAGTAAGAGGGTAGTG +
Preference number: 5 (lower is better)
Translates to: LHVEGSSRCSSTGWSKRYSNCSR*RSKRVV
Trigger: CACTACCCTCTTACTCCTCAACCTGCTGCAATTTGA...GTATCTTTTGGACCAGCCTGTGCTAGAGCAGCGGCTGGAACCCTCAACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATAGGGACTAAGAGGGTCTaGGCATCCAGACTCCCACTT +
Preference number: 5 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIGTKRV*ASRLPL
Trigger: AAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCCC...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATATGGTTCTCCTCCCAATaGCCCACCCATCCACATCAC +
Preference number: 5 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIWFSSQ*PTHPHH
Trigger: GTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCA...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp AGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTCTCATCCAGGCCCTTTaGGTTCTCCTCCCAATTGCC +
Preference number: 5 (lower is better)
Translates to: RIGKYLEGHLSKPLHAALLIQAL*VLLPIA
Trigger: GGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAG...AAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp AGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCACTCTCCATGCTGCTCTaGTCACTCCCTCCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: RFTAYLGKAGSVHKKSYPLSMLL*SLPPSH
Trigger: ATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAG...TGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp TCTGACTCATCCAGGCCCTTTTGGTTCTCCTCCCAATTGCCCACCCATCCACATCTTGAATCCCAAAACTaGAAACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: SDSSRPFWFSSQLPTHPHLESQN*KPAWAT
Trigger: TGTTGCCCAGGCTGGTTTCAAGTTTTGGGATTCAAG...ATGTGGATGGGTGGGCAATTGGGAGGAGAACCAAAAGGGCCTGGATGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678570.1
CDS GCA 90 bp CACGCCTTAATGGCCTTAGGTAAATACCTAAATTTCTCCAGCACCTaGCAGCAAAGAGGGTCCCATCAGAAGGCTGGTTCAGCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: HALMALGKYLNFSST*QQRGSHQKAGSAKQ
Trigger: TTGCTTGGCTGAACCAGCCTTCTGATGGGACCCTCTTTGCTGGCAGGTGCTGGAGAAATTTAGGTATTTACCTAAGGCCATTAAGGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677986.1
ENST00000678848.1
CDS CCA 90 bp AGAGAAGGGGAAAAGGGTAGTGCTAGGAATAGACAGGGACAGGGTTaGAAAGTCCACATTAAATCACAGGCGAGGACCCTGAGCCATTCA +
Preference number: 5 (lower is better)
Translates to: REGEKGSARNRQGQG*KVHIKSQARTLSHS
Trigger: TGAATGGCTCAGGGTCCTCGCCTGTGATTTAATGTGGACTTTCCAACCCTGTCCCTGTCTATTCCTAGCACTACCCTTTTCCCCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CCA 90 bp TGCATTTCCACTTTTCCACCGACTGTCCTGTCCTATTCCTACAGCTaGTGTGTCAGCCAGAGCAGGGACAGTTCCATCCATTCCAACATT +
Preference number: 5 (lower is better)
Translates to: CISTFPPTVLSYSYS*CVSQSRDSSIHSNI
Trigger: AATGTTGGAATGGATGGAACTGTCCCTGCTCTGGCTGACACACCAGCTGTAGGAATAGGACAGGACAGTCGGTGGAAAAGTGGAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS-3UTR CAA 90 bp AAAATTCCCCTGTGGTGGACAACTGAGTTGATGTGGCTGATCCAGGCTGTCTCCATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: KIPLWWTTELMWLIQAVSIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...GGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAGGGGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GAGCACACATCTGGCAATGTGGCTGTTCAGTTCCAACTCCTGGAAGTCTTGCCTTCCTTCTCCTCTTCCTaGACATCATTAACACTGCCC +
Preference number: 5 (lower is better)
Translates to: EHTSGNVAVQFQLLEVLPSFSSS*TSLTLP
Trigger: GGGCAGTGTTAATGATGTCAAGGAAGAGGAGAAGGA...AGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGATGTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCAAATGAAACAGATATaGCTCAAGAAAGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCQMKQI*LKKARR
Trigger: CCTTCTTGCTTTCTTGAGCAATATCTGTTTCATTTG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp TCAGTTGTACTAGGGGGTGGGCTGTTGCCCTGGCACGGCTGGATGAACACTTGCCAAAGGAGATTTTGCTaGTGTTGCTGTTATTGTTGT +
Preference number: 5 (lower is better)
Translates to: SVVLGGGLLPWHGWMNTCQRRFC*CCCYCC
Trigger: ACAACAATAACAGCAACACAAGCAAAATCTCCTTTG...GCAAGTGTTCATCCAGCCGTGCCAGGGCAACAGCCCACCCCCTAGTACAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTTGGTTCTCCTCCCAATaGCCCACCCATCCACATCAC +
Preference number: 5 (lower is better)
Translates to: GLDSLLIWERQDLCTRNRWFSSQ*PTHPHH
Trigger: GTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCA...ACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GAAAAGCATCCAGCACAGCCTCCCGTAAACTGCTCCTCTTCGTATGATACCAGCAAGGTTTCAGGTGTCTaGGTGGTATCCAAATCGGCT +
Preference number: 5 (lower is better)
Translates to: EKHPAQPPVNCSSSYDTSKVSGV*VVSKSA
Trigger: AGCCGATTTGGATACCACCAAGACACCTGAAACCTT...GCTGGTATCATACGAAGAGGAGCAGTTTACGGGAGGCTGTGCTGGATGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp CCAGCAGTTCTCGGGCTCTTTCATATAGCTCTTTATGACTCAGGGCCTTTTTGCGTTTATGGCCAGACTTaGGGAGGCTTGCTCCCAACA +
Preference number: 5 (lower is better)
Translates to: PAVLGLFHIALYDSGPFCVYGQT*GGLLPT
Trigger: TGTTGGGAGCAAGCCTCCCAAAGTCTGGCCATAAAC...GCAAAAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS GCA 90 bp GCAGTGAGCCCCCAGAACCCTACCTTCATATTCTATCTGCAAAGCTaGCAACTGTTCAAATGTGGGGACAAGGAAGCCATCATCCAGAAA +
Preference number: 5 (lower is better)
Translates to: AVSPQNPTFIFYLQS*QLFKCGDKEAIIQK
Trigger: TTTCTGGATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGGTAGGGTTCTGGGGGCTCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678602.1
CDS GCA 90 bp GCAGATGAGAGCACACCAAGTCCAGGGCACTTTCTTACCGTAAACTaGTCCTCTTCGTATGATACCAGCAGTTCTCGGGCTCTTTCATAT +
Preference number: 5 (lower is better)
Translates to: ADESTPSPGHFLTVN*SSSYDTSSSRALSY
Trigger: ATATGAAAGAGCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAGTTTACGGTAAGAAAGTGCCCTGGACTTGGTGTGCTCTCATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677986.1
ENST00000678074.1
ENST00000678705.1
ENST00000678848.1
CDS-3UTR CAA 90 bp AGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGCTCTTCGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: RIGKYLEGHLSKPLHAALRNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...AAGAGCAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCATCGCATGTAACGCCCTaGAGCTCTGCCAGGACACAT +
Preference number: 5 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSSHVTP*SSARTH
Trigger: ATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGA...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACGCATTCCGTCCAGTCTaGGTGTTGGCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: TRFTAYLGKAGSVHKKSYAFRPV*VLATIS
Trigger: ACTGATCGTGGCCAACACCAAGACTGGACGGAATGC...GTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CACTTAGGATTGGAAAGTACCTTGAAGGCCACCTATCCAAACCTCTCCATGCTGATCCCTCTGGTATGCTaGGGTTGGGAGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: HLGLESTLKATYPNLSMLIPLVC*GWEKIS
Trigger: AGAGATCTTCTCCCAACCCAAGCATACCAGAGGGAT...CAGCATGGAGAGGTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGAGGCACGTTCCTAGGTaGAAGAGCAAGAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGRHVPR*KSKSQQ
Trigger: CTGCTGGCTCTTGCTCTTCAACCTAGGAACGTGCCT...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS-3UTR CAA 90 bp TGTGGTCCAGACTTCTCCGAGACCAGCAGCTTCCACTCTGCAGGCACTCTGTGTCAAAGGAGATTTTGCTaGTGTTGCTGTTATTGTTGT +
Preference number: 5 (lower is better)
Translates to: CGPDFSETSSFHSAGTLCQRRFC*CCCYCC
Trigger: ACAACAATAACAGCAACACAAGCAAAATCTCCTTTG...ACACAGAGTGCCTGCAGAGTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678956.1
CDS-3UTR CAA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCAGGGACTAAGAGGGTCTaGGCATCCAGACTCCCACTT +
Preference number: 5 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSGTKRV*ASRLPL
Trigger: AAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCCC...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCATGGTTCTCCTCCCAATaGCCCACCCATCCACATCAC +
Preference number: 5 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSWFSSQ*PTHPHH
Trigger: GTGATGTGGATGGGTGGGCAATTGGGAGGAGAACCA...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS TCA 90 bp AGCCAGACACTTGAGGGGGACCTTGGCAAACTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCTGGAGTTGAGGGAGAAATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: SQTLEGDLGKLCLPL*DKIHKPGVEGEISG
Trigger: GCCACTTATTTCTCCCTCAACTCCAGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAGTTTGCCAAGGTCCCCCTCAAGTGTCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CCA 90 bp CCCTACCTTCATATTCTATCTGCAAAGCTGCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCATCCAGAAAAGCATCCAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: PYLHILSAKLPTVQM*GQGSHHPEKHPAQP
Trigger: AGGCTGTGCTGGATGCTTTTCTGGATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678602.1
CDS-3UTR CAA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGACTGAGAGAACGGCTTaGGCACCAGGACGTCATTCA +
Preference number: 5 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGTERTA*APGRHS
Trigger: TGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGT...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGACTAGATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTATCCCTCTGGTATGCTaGGGTTGGGAGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: GLDSLLIWERQDLCTRNRIPLVC*GWEKIS
Trigger: AGAGATCTTCTCCCAACCCAAGCATACCAGAGGGAT...ACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATCTAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATCCCTGCCCCATGGCTTaGAAGATGCCAAGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHPCPMA*KMPSEP
Trigger: CGGCTCACTTGGCATCTTCAAAGCCATGGGGCAGGG...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484069.1
ENST00000678956.1
CDS CCA 90 bp GACCATCTTCATATTCTATCTGCAAAGCTGCCAACTGTTCAAATGTaGGGACAAGGAAGCCATCATCCAGAAAAGCATCCAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: DHLHILSAKLPTVQM*GQGSHHPEKHPAQP
Trigger: AGGCTGTGCTGGATGCTTTTCTGGATGATGGCTTCCTTGTCCCCACATTTGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000374811.8
ENST00000484069.1
ENST00000677087.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS-3UTR CAA 90 bp GTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGGGATCACGGAATATTTACCTCTaGAGCCAGACACTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: VPNAIRVKERLLDSIGGSRNIYL*SQTLEG
Trigger: CCCCTCAAGTGTCTGGCTCAAGAGGTAAATATTCCG...TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ATATTGCTCAAGAAAGCAAGAAGGGAATCAGGCGCTAAAGGCTTCCATGATTATCGTCCAGTCTTGGTGTaGGCCACGATCAGTTCAACG +
Preference number: 5 (lower is better)
Translates to: ILLKKARRESGAKGFHDYRPVLV*ATISST
Trigger: CGTTGAACTGATCGTGGCCAACACCAAGACTGGACG...ATAATCATGGAAGCCTTTAGCGCCTGATTCCCTTCTTGCTTTCTTGAGCAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS-3UTR CAA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGATCCCTCTGGTATGCTaGGGTTGGGAGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGIPLVC*GWEKIS
Trigger: AGAGATCTTCTCCCAACCCAAGCATACCAGAGGGAT...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp ACCTATCCAAACCTCTCCATGCTGCTCTTGTCACTCCCTCCCTCCCATTATATACCTGGAAGTCTTGCCTaGACTGACTTTGTCTACAAA +
Preference number: 5 (lower is better)
Translates to: TYPNLSMLLLSLPPSHYIPGSLA*TDFVYK
Trigger: TTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAGG...TATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAGGTTTGGATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CTCTGTGTCCCAAATGCCATCAGGGTTAAAGAAAGACTTTTGGACTCAATAGGGATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: LCVPNAIRVKERLLDSIGIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...CCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTGGGACACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484069.1
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
ENST00000678956.1
CDS-3UTR CAA 90 bp GGTCTCATAGCCTTCAGAGCTGAAAGCCCCAAACAGAGATTTACCCACATATTTATATGGGGCATTTTCTaGTGGGTCAACTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: GLIAFRAESPKQRFTHIFIWGIF*WVNSWR
Trigger: TCGCCATGAGTTGACCCACAAGAAAATGCCCCATAT...AAATATGTGGGTAAATCTCTGTTTGGGGCTTTCAGCTCTGAAGGCTATGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp GATTCACTGCTTATCTGGGAAAGGCAGGATCTGTGCACAAGAAATCGTACCCAACCTGGAAGTCTTGCCTaGACTGACTTTGTCTACAAA +
Preference number: 5 (lower is better)
Translates to: DSLLIWERQDLCTRNRTQPGSLA*TDFVYK
Trigger: TTTGTAGACAAAGTCAGTCAAGGCAAGACTTCCAGG...TTGGGTACGATTTCTTGTGCACAGATCCTGCCTTTCCCAGATAAGCAGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS-3UTR CAA 90 bp CCAGCAGTTCTCGGGCTCTTTCATATAGCTCTTTATGACTCAGGGCCTTTTTGCTATTACCAGCCCTTATaGAAGGAATACTCATGGCAG +
Preference number: 5 (lower is better)
Translates to: PAVLGLFHIALYDSGPFCYYQPL*KEYSWQ
Trigger: CTGCCATGAGTATTCCTTCAATAAGGGCTGGTAATA...GCAAAAAGGCCCTGAGTCATAAAGAGCTATATGAAAGAGCCCGAGAACTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS TCA 90 bp CACAGCCCAAGGAACCATTTTATTCCAAACACTTTGCTGAGTTACTaGAACCCTGCATTTCCACTTTTCCACCGACTGTCCTGTCCTATT +
Preference number: 5 (lower is better)
Translates to: HSPRNHFIPNTLLSY*NPAFPLFHRLSCPI
Trigger: AATAGGACAGGACAGTCGGTGGAAAAGTGGAAATGCAGGGTTTCAGTAACTCAGCAAAGTGTTTGGAATAAAATGGTTCCTTGGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS TCA 90 bp ATAAGTGGCACAGCCCAAGGAACCATTTTATTCCAAACACTTTGCTaGGTTACTGAAACCCTGCATTTCCACTTTTCCACCGACTGTCCT +
Preference number: 5 (lower is better)
Translates to: ISGTAQGTILFQTLC*VTETLHFHFSTDCP
Trigger: AGGACAGTCGGTGGAAAAGTGGAAATGCAGGGTTTCAGTAACTCAGCAAAGTGTTTGGAATAAAATGGTTCCTTGGGCTGTGCCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS-3UTR CAA 90 bp CTCCTAGAGCCAGCCATATCATTTGAGGTTGAGGTGCCACTATACCACCATGGTTTAAAAGCACAGTCATaGAAATCACAGAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLEPAISFEVEVPLYHHGLKAQS*KSQSFQ
Trigger: TTGGAAGCTCTGTGATTTCAATGACTGTGCTTTTAA...ACCATGGTGGTATAGTGGCACCTCAACCTCAAATGATATGGCTGGCTCTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS GCA 90 bp AAGGAACCATTTTATTCCAAACACTTTGCTGAGTTACTGAAACCCTaGATTTCCACTTTTCCACCGACTGTCCTGTCCTATTCCTACAGC +
Preference number: 5 (lower is better)
Translates to: KEPFYSKHFAELLKP*ISTFPPTVLSYSYS
Trigger: GCTGTAGGAATAGGACAGGACAGTCGGTGGAAAAGTGGAAATGCAGGGTTTCAGTAACTCAGCAAAGTGTTTGGAATAAAATGGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS-3UTR CAA 90 bp GCACAGTCATTGAAATCACAGAGCTTCCAAGTGTTTTTATCCATTTTAATAGGTCAGGCTGTTCTCCAGTaGGCGGCACCAATAGGTCTT +
Preference number: 5 (lower is better)
Translates to: AQSLKSQSFQVFLSILIGQAVLQ*AAPIGL
Trigger: AAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTG...ACCTATTAAAATGGATAAAAACACTTGGAAGCTCTGTGATTTCAATGACTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677056.1
CDS-3UTR CAA 90 bp CTAGACAGATTTGGGTTTCAGCACTTTATAGGAACTAGTAATAAGCACAGGCATAATGATGGAAATGGGTaGCTGAGTGTAGTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LDRFGFQHFIGTSNKHRHNDGNG*LSVVEN
Trigger: ATTCTCCACTACACTCAGCAACCCATTTCCATCATT...ATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTGAAACCCAAATCTGTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484069.1
CDS GCA 72 bp TGTGCCGCGCCGCTCCGCACAGCCTTCAGCTCAGCGTaGTACCCTCACTCCGAACCGCCACCGCACCAGCAG +
Preference number: 6 (lower is better)
Translates to: CAAPLRTAFSSA*YPHSEPPPHQQ
Trigger: CTGCTGGTGCGGTGGCGGTTCGGAGTGAGGGTAGCACGCTGAGCTGAAGGCTGTGCGGAGCGGCGCGGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679056.1
CDS TCA 72 bp CTAGACCTGGCCCGGCCCCGGATTCCCACGACATACTaGGCTCAACAACAGGCTCTGTGCCGCGCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: LDLARPRIPTTY*AQQQALCRAAP
Trigger: CGGAGCGGCGCGGCACAGAGCCTGTTGTTGAGCTCAGTATGTCGTGGGAATCCGGGGCCGGGCCAGGTCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS TCA 72 bp AGGCAGGGAGACCAGGGAGGAGCCTGTTCCGACAGTTaGGGCCAGAGTCGGGGAGGGCTGACCTGGGGCACT +
Preference number: 6 (lower is better)
Translates to: RQGDQGGACSDS*GQSRGGLTWGT
Trigger: AGTGCCCCAGGTCAGCCCTCCCCGACTCTGGCCTCAACTGTCGGAACAGGCTCCTCCCTGGTCTCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000677154.1
ENST00000678547.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS TCA 72 bp CGGGATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: RDPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000678074.1
ENST00000678173.1
ENST00000678705.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679277.1
CDS TCA 72 bp ACAGATAAACCGTCACCTGGTCCCACTCGGCCCTGCTaGGCCAGGCGACCACGATGCCGTGGGCCGAGAGTG +
Preference number: 6 (lower is better)
Translates to: TDKPSPGPTRPC*ARRPRCRGPRV
Trigger: CACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTGGGACCAGGTGACGGTTTATCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS TCA 72 bp GGCAATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: GNPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677986.1
CDS TCA 72 bp GGAGATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: GDPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679261.1
CDS CCA 72 bp CACTCGGCCCTGCTGAGCCAGGCGACCACGATGCCGTaGGCCGAGAGTGGCAACGACCCTTTCCCTTTAACG +
Preference number: 6 (lower is better)
Translates to: HSALLSQATTMP*AESGNDPFPLT
Trigger: CGTTAAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAGCAGGGCCGAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS TCA 72 bp GATGATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: DDPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000677834.1
ENST00000677969.1
CDS TCA 72 bp AGCAATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: SNPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS TCA 72 bp AAGGATCCGAAGGAGTTGGGGGCTGGCCCAGCAAGGTaGGCCCAAGCAGGACTCAACCATCCGGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: KDPKELGAGPAR*AQAGLNHPGPV
Trigger: GACTGGCCCCGGATGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678547.1
CDS CCA 72 bp TTTCCGTACCACGCACTCCACACGAGATCCATCCCCTaGGAACCTAGACCTGGCCCGGCCCCGGATTCCCAC +
Preference number: 6 (lower is better)
Translates to: FPYHALHTRSIP*EPRPGPAPDSH
Trigger: GTGGGAATCCGGGGCCGGGCCAGGTCTAGGTTCCCAGGGGATGGATCTCGTGTGGAGTGCGTGGTACGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS CCA 72 bp GAGCTCAGCTACCCGGGATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 6 (lower is better)
Translates to: ELSYPGSEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCCGGGTAGCTGAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000678074.1
ENST00000678173.1
ENST00000678705.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679277.1
CDS GCA 72 bp CGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATGCTGAGCAAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RSSFSCSSSGRP*PMALKMLSKGR
Trigger: CCTCCCTTTGCTCAGCATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000677154.1
ENST00000678547.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS GCA 72 bp CGCAGCAGCTTCTCCTGCTCCTCGTCTGGCAGGCCCTaGCCCATGGCTTTGAAGATGATCCGAAGGAGTTGG +
Preference number: 6 (lower is better)
Translates to: RSSFSCSSSGRP*PMALKMIRRSW
Trigger: CCAACTCCTTCGGATCATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGGAGAAGCTGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000677087.1
ENST00000677834.1
ENST00000677969.1
CDS GCA 72 bp AGTGGGGGACTCTTGCCCCAAGTGAGCCGCTGTTACTaGCGGCATGTGTCGCATCCCTCTGGTATGCTTGGG +
Preference number: 6 (lower is better)
Translates to: SGGLLPQVSRCY*RHVSHPSGMLG
Trigger: CCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTCACTTGGGGCAAGAGTCCCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678173.1
CDS CCA 72 bp GCTGAGCCAGGCGACCACGATGCCGTGGGCCGAGAGTaGCAACGACCCTTTCCCTTTAACGCACTTTCCGTA +
Preference number: 6 (lower is better)
Translates to: AEPGDHDAVGRE*QRPFPFNALSV
Trigger: TACGGAAAGTGCGTTAAAGGGAAAGGGTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000484069.1
ENST00000676986.1
ENST00000677056.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678547.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS CCA 72 bp CTTCCACTCTGCAGGCAATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 6 (lower is better)
Translates to: LPLCRQSEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCCTGCAGAGTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469091.1
ENST00000677986.1
CDS CCA 72 bp GCCAGGAAGGCTGAGGGACTTTCAGAGGCCATGGAATaGCAGGAAACAGCCTTCACACCCCAACCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: ARKAEGLSEAME*QETAFTPQPRA
Trigger: GGCCCTGGGTTGGGGTGTGAAGGCTGTTTCCTGCCATTCCATGGCCTCTGAAAGTCCCTCAGCCTTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678602.1
CDS CCA 72 bp TCCCACCAAGGACAGCAATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 6 (lower is better)
Translates to: SHQGQQSEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTGCTGTCCTTGGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676986.1
ENST00000678570.1
ENST00000678823.1
CDS GCA 72 bp GGCCCCATCTACTGGTCAGCTGCGGAATTGCAGGGCTaGGCAACTACCCATTCCCAGTTGTTCCCTACCACC +
Preference number: 6 (lower is better)
Translates to: GPIYWSAAELQG*ATTHSQLFPTT
Trigger: GGTGGTAGGGAACAACTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS CCA 72 bp GATGATGAGTGGCCGAAATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 6 (lower is better)
Translates to: DDEWPKSEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATTTCGGCCACTCATCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677154.1
CDS CCA 72 bp GAATCAGGCGCTAAAGGATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 6 (lower is better)
Translates to: ESGAKGSEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCCTTTAGCGCCTGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678547.1
CDS CCA 72 bp TCACTGGAGTTGAGGAGATCCGAAGGAGTTGGGGGCTaGCCCAGCAAGGTGAGCCCAAGCAGGACTCAACCA +
Preference number: 6 (lower is better)
Translates to: SLELRRSEGVGG*PSKVSPSRTQP
Trigger: TGGTTGAGTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATCTCCTCAACTCCAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679261.1
CDS GCA 72 bp AGCTCTTGGGCCCCATCTACTGGTCAGCTGCGGAATTaGAGGGCTGCGCAACTACCCATTCCCAGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: SSWAPSTGQLRN*RAAQLPIPSCS
Trigger: GGAACAACTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS GCA 72 bp TTCCATTCCGCTAACGGGATTAGCGCAAGAGATGGCTaGCGCGTTCCCCCAGGCATTTGGGAGAGGGACAAC +
Preference number: 6 (lower is better)
Translates to: FHSANGISARDG*RVPPGIWERDN
Trigger: GTTGTCCCTCTCCCAAATGCCTGGGGGAACGCGGCAGCCATCTCTTGCGCTAATCCCGTTAGCGGAATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS GCA 72 bp TTCTCCAGCAGAGCTCAGCTACCCGGGCGAGTGGGATaGTGGGATGTGAGCTTTCAGAGGTGGAATAGCTCC +
Preference number: 6 (lower is better)
Translates to: FSSRAQLPGRVG*WDVSFQRWNSS
Trigger: GGAGCTATTCCACCTCTGAAAGCTCACATCCCAGCATCCCACTCGCCCGGGTAGCTGAGCTCTGCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679261.1
CDS CCA 72 bp CAGTTGAACAGCCTCCAGCCCCTTCTTGCTTCCCACTaGCCTGCAGAAAATCGGCGAGCATTCCGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: QLNSLQPLLASH*PAENRRAFRPE
Trigger: CTCAGGACGGAATGCTCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGCTGGAGGCTGTTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000678074.1
ENST00000678705.1
ENST00000678848.1
ENST00000679277.1
CDS CCA 72 bp AGCGCAAGAGATGGCTGCCGCGTTCCCCCAGGCATTTaGGAGAGGGACAACTTTAGGCGACTTAGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: SARDGCRVPPGI*ERDNFRRLRGR
Trigger: TCTTCCCCTAAGTCGCCTAAAGTTGTCCCTCTCCCAAATGCCTGGGGGAACGCGGCAGCCATCTCTTGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CCA 72 bp GCACCTGATTTAGGGAAGCTCTTGGGCCCCATCTACTaGTCAGCTGCGGAATTGCAGGGCTGCGCAACTACC +
Preference number: 6 (lower is better)
Translates to: APDLGKLLGPIY*SAAELQGCATT
Trigger: GGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTTCCCTAAATCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678705.1
CDS CCA 72 bp TCCAGCAGAGCTCAGCTACCCGGGCGAGTGGGATGCTaGGATGTGAGCTTTCAGAGGTGGAATAGCTCCGAA +
Preference number: 6 (lower is better)
Translates to: SSRAQLPGRVGC*DVSFQRWNSSE
Trigger: TTCGGAGCTATTCCACCTCTGAAAGCTCACATCCCAGCATCCCACTCGCCCGGGTAGCTGAGCTCTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679261.1
CDS CAA 72 bp TCCAGCACAGCCTCCCTGTTCTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACATTCTACACGTGGGGAC +
Preference number: 6 (lower is better)
Translates to: SSTASLFSHVTP*SSARTHSTRGD
Trigger: GTCCCCACGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGAGAACAGGGAGGCTGTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000676986.1
ENST00000677087.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679261.1
ENST00000679277.1
CDS CAA 72 bp GCGGAATTGCAGGGCTGCGCAACTACCCATTCCCAGTaGTTCCCTACCACCCAGTGGGGCAGATTATCCGCA +
Preference number: 6 (lower is better)
Translates to: AELQGCATTHSQ*FPTTQWGRLSA
Trigger: TGCGGATAATCTGCCCCACTGGGTGGTAGGGAACAACTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS CAA 90 bp GATTTAGGGAAGCTCTTGGGCCCCATCTACTGGTCAGCTGCGGAATaGCAGGGCTGCGCAACTACCCATTCCCAGTTGTTCCCTACCACC +
Preference number: 6 (lower is better)
Translates to: DLGKLLGPIYWSAAE*QGCATTHSQLFPTT
Trigger: GGTGGTAGGGAACAACTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTTCCCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS TCA 72 bp GAGCTCAGCTACCCGGGCGAGTGGGATGCTGGGATGTaGGCTTTCAGAGGTGGAATAGCTCCGAATGATGGA +
Preference number: 6 (lower is better)
Translates to: ELSYPGEWDAGM*AFRGGIAPNDG
Trigger: TCCATCATTCGGAGCTATTCCACCTCTGAAAGCTCACATCCCAGCATCCCACTCGCCCGGGTAGCTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679261.1
CDS GCA 72 bp TTTAGGGAAGCTCTTGGGCCCCATCTACTGGTCAGCTaGGGAATTGCAGGGCTGCGCAACTACCCATTCCCA +
Preference number: 6 (lower is better)
Translates to: FREALGPHLLVS*GIAGLRNYPFP
Trigger: TGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTTCCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS CCA 72 bp TCACCTGATTTAGGGAAGCTCTTGGGCCCCATCTACTaGTCAGCTGCGGAATTGCAGGGCTGCGCAACTACC +
Preference number: 6 (lower is better)
Translates to: SPDLGKLLGPIY*SAAELQGCATT
Trigger: GGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTTCCCTAAATCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677986.1
ENST00000678848.1
CDS CCA 72 bp CCTGAGCAGGGGCTGCCAGAACTGAGAGAACGGCTTTaGCACCAGGACGTCATTCAAGTCCACGTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PEQGLPELRERL*HQDVIQVHVFW
Trigger: CCAGAAAACGTGGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGCCCCTGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000678074.1
ENST00000678547.1
ENST00000678705.1
ENST00000678848.1
ENST00000679116.1
ENST00000679277.1
CDS CAA 72 bp GGTGAGACCCCATCTCTGTTCTCGCATGTAACGCCCTaGAGCTCTGCCAGGACACATTCTACACGTGGGGAC +
Preference number: 6 (lower is better)
Translates to: GETPSLFSHVTP*SSARTHSTRGD
Trigger: GTCCCCACGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGAGAACAGAGATGGGGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678570.1
CDS CAA 72 bp AAGCTCTTGGGCCCCATCTACTGGTCAGCTGCGGAATaGCAGGGCTGCGCAACTACCCATTCCCAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: KLLGPIYWSAAE*QGCATTHSQLF
Trigger: GAACAACTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCAGTAGATGGGGCCCAAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS CAA 90 bp TGGTCAGCTGCGGAATTGCAGGGCTGCGCAACTACCCATTCCCAGTaGTTCCCTACCACCCAGTGGGGCAGATTATCCGCAAACTTCATC +
Preference number: 6 (lower is better)
Translates to: WSAAELQGCATTHSQ*FPTTQWGRLSANFI
Trigger: GATGAAGTTTGCGGATAATCTGCCCCACTGGGTGGTAGGGAACAACTGGGAATGGGTAGTTGCGCAGCCCTGCAATTCCGCAGCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS GCA 72 bp AGCCTCCCTGTTCTCGCATGTAACGCCCTTGAGCTCTaGCAGGACACATTCTACACGTGGGGACGGGTTATT +
Preference number: 6 (lower is better)
Translates to: SLPVLACNALEL*QDTFYTWGRVI
Trigger: AATAACCCGTCCCCACGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGAGAACAGGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000676986.1
ENST00000677087.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679261.1
ENST00000679277.1
CDS CCA 72 bp AACGCCCTTGAGCTCTGCCAGGACACATTCTACACGTaGGGACGGGTTATTCCACGCCTTAATGGCCTTAGG +
Preference number: 6 (lower is better)
Translates to: NALELCQDTFYT*GRVIPRLNGLR
Trigger: CCTAAGGCCATTAAGGCGTGGAATAACCCGTCCCCACGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000374804.9
ENST00000374807.9
ENST00000374811.8
ENST00000676986.1
ENST00000677087.1
ENST00000677154.1
ENST00000677834.1
ENST00000677969.1
ENST00000677986.1
ENST00000678074.1
ENST00000678173.1
ENST00000678570.1
ENST00000678602.1
ENST00000678705.1
ENST00000678823.1
ENST00000678848.1
ENST00000678956.1
ENST00000679056.1
ENST00000679261.1
ENST00000679277.1
CDS CAA 72 bp AGGTCAGCAGTAGAAGCCACTGCCAGAGGGAGTTCGTaGCCTGACCTAAAGGGTCACAGTCCAGCACCATCA +
Preference number: 6 (lower is better)
Translates to: RSAVEATARGSS*PDLKGHSPAPS
Trigger: TGATGGTGCTGGACTGTGACCCTTTAGGTCAGGCAACGAACTCCCTCTGGCAGTGGCTTCTACTGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 90 bp ACTCCCCACCTATACCTCCCAACTGCTCAAAGAATTCAGGGCACTTaGCCCCAGCCCAGTTTAGTTGGCTCAGTCTTGGTGTTGGCCACG +
Preference number: 6 (lower is better)
Translates to: TPHLYLPTAQRIQGT*PQPSLVGSVLVLAT
Trigger: CGTGGCCAACACCAAGACTGAGCCAACTAAACTGGGCTGGGGCAAAGTGCCCTGAATTCTTTGAGCAGTTGGGAGGTATAGGTGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679277.1
CDS TCA 72 bp GTAAGTCGGCTCCCAACTCAATCTTACCAACTGGACTaGGGCGCCCCACTCAAACACTGTCTTGCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: VSRLPTQSYQLD*GAPLKHCLAGK
Trigger: CTTGCCTGCAAGACAGTGTTTGAGTGGGGCGCCTCAGTCCAGTTGGTAAGATTGAGTTGGGAGCCGACTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS GCA 72 bp CCCATCTCTGTTCTCGCATGTAACGCCCTTGAGCTCTaGCAGGACACATTCTACACGTGGGGACGGGTTATT +
Preference number: 6 (lower is better)
Translates to: PISVLACNALEL*QDTFYTWGRVI
Trigger: AATAACCCGTCCCCACGTGTAGAATGTGTCCTGGCAGAGCTCAAGGGCGTTACATGCGAGAACAGAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678570.1
CDS GCA 72 bp CCAACTGGACTGAGGCGCCCCACTCAAACACTGTCTTaGAGGCAAGACTTCCTCCCCATTGGAATCGGAAAT +
Preference number: 6 (lower is better)
Translates to: PTGLRRPTQTLS*RQDFLPIGIGN
Trigger: ATTTCCGATTCCAATGGGGAGGAAGTCTTGCCTGCAAGACAGTGTTTGAGTGGGGCGCCTCAGTCCAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS GCA 72 bp CTCCACCCCTACCCCATGCAGGTCTTACCTGACCAATaGCATGCCATAGAGCAGTCTAAGTTCATCAGTGCC +
Preference number: 6 (lower is better)
Translates to: LHPYPMQVLPDQ*HAIEQSKFISA
Trigger: GGCACTGATGAACTTAGACTGCTCTATGGCATGGCATTGGTCAGGTAAGACCTGCATGGGGTAGGGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 72 bp ACCAACTGGACTGAGGCGCCCCACTCAAACACTGTCTaGCAGGCAAGACTTCCTCCCCATTGGAATCGGAAA +
Preference number: 6 (lower is better)
Translates to: TNWTEAPHSNTV*QARLPPHWNRK
Trigger: TTTCCGATTCCAATGGGGAGGAAGTCTTGCCTGCAAGACAGTGTTTGAGTGGGGCGCCTCAGTCCAGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS TCA 72 bp AGCAGTAGAAGCCACTGCCAGAGGGAGTTCGTTGCCTaGCCTAAAGGGTCACAGTCCAGCACCATCATAAAG +
Preference number: 6 (lower is better)
Translates to: SSRSHCQREFVA*PKGSQSSTIIK
Trigger: CTTTATGATGGTGCTGGACTGTGACCCTTTAGGTCAGGCAACGAACTCCCTCTGGCAGTGGCTTCTACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 72 bp ATCTGTTCCCTTCCATCGGTGTGGAGGATCAGCCAATaGGACTCTGCTCCTCTTGTCTCCTTCCTAGTTCCC +
Preference number: 6 (lower is better)
Translates to: ICSLPSVWRISQ*DSAPLVSFLVP
Trigger: GGGAACTAGGAAGGAGACAAGAGGAGCAGAGTCCAATTGGCTGATCCTCCACACCGATGGAAGGGAACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677986.1
ENST00000678074.1
ENST00000678705.1
ENST00000678848.1
CDS CAA 90 bp GGCGCCCCACTCAAACACTGTCTTGCAGGCAAGACTTCCTCCCCATaGGAATCGGAAATCTACCCTAGGGTACTAATCTACTCCTTAAGC +
Preference number: 6 (lower is better)
Translates to: GAPLKHCLAGKTSSP*ESEIYPRVLIYSLS
Trigger: GCTTAAGGAGTAGATTAGTACCCTAGGGTAGATTTCCGATTCCAATGGGGAGGAAGTCTTGCCTGCAAGACAGTGTTTGAGTGGGGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 90 bp CTCAATCTTACCAACTGGACTGAGGCGCCCCACTCAAACACTGTCTaGCAGGCAAGACTTCCTCCCCATTGGAATCGGAAATCTACCCTA +
Preference number: 6 (lower is better)
Translates to: LNLTNWTEAPHSNTV*QARLPPHWNRKSTL
Trigger: TAGGGTAGATTTCCGATTCCAATGGGGAGGAAGTCTTGCCTGCAAGACAGTGTTTGAGTGGGGCGCCTCAGTCCAGTTGGTAAGATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS TCA 72 bp TGTTTCCACCCAGGAATCAGAACCCTAAGGGTGCAGTaGGCCCCCAGAACCCTACCTTCATATTCTATCTGC +
Preference number: 6 (lower is better)
Translates to: CFHPGIRTLRVQ*APRTLPSYSIC
Trigger: GCAGATAGAATATGAAGGTAGGGTTCTGGGGGCTCACTGCACCCTTAGGGTTCTGATTCCTGGGTGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678602.1
CDS GCA 72 bp AGCACACCAAGTCCAGGGCACTTTCTTACCGTAAACTaGTCCTCTTCGTATGATACCAGCAGTTCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: STPSPGHFLTVN*SSSYDTSSSRA
Trigger: AGCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAGTTTACGGTAAGAAAGTGCCCTGGACTTGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677986.1
ENST00000678074.1
ENST00000678705.1
ENST00000678848.1
CDS CCA 72 bp TCCGCAAACTTCATCATCTGTTCCCTTCCATCGGTGTaGAGGATCAGCCAATTGGACTCTGCTCCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: SANFIICSLPSV*RISQLDSAPLV
Trigger: GACAAGAGGAGCAGAGTCCAATTGGCTGATCCTCCACACCGATGGAAGGGAACAGATGATGAAGTTTGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677986.1
ENST00000678074.1
ENST00000678705.1
ENST00000678848.1
CDS CCA 72 bp GCAACTACCCATTCCCAGTTGTTCCCTACCACCCAGTaGGGCAGATTATCCGCAAACTTCATCATCTGTTCC +
Preference number: 6 (lower is better)
Translates to: ATTHSQLFPTTQ*GRLSANFIICS
Trigger: GGAACAGATGATGAAGTTTGCGGATAATCTGCCCCACTGGGTGGTAGGGAACAACTGGGAATGGGTAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677986.1
ENST00000678705.1
ENST00000678848.1
CDS CAA 72 bp CCTTACACTGGTCCACCCTCCACCTCAGAACCTAGGTaGTTGCAGGCTACACCCATCATATTCTGGTTCAAG +
Preference number: 6 (lower is better)
Translates to: PYTGPPSTSEPR*LQATPIIFWFK
Trigger: CTTGAACCAGAATATGATGGGTGTAGCCTGCAACAACCTAGGTTCTGAGGTGGAGGGTGGACCAGTGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 72 bp CTATACCTCCCAACTGCTCAAAGAATTCAGGGCACTTaGCCCCAGCCCAGTTTAGTTGGCTCAGTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LYLPTAQRIQGT*PQPSLVGSVLV
Trigger: CACCAAGACTGAGCCAACTAAACTGGGCTGGGGCAAAGTGCCCTGAATTCTTTGAGCAGTTGGGAGGTATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679277.1
CDS CCA 72 bp GGGAGAGGGACAACTTTAGGCGACTTAGGGGAAGACTaGAGAACAGGGCCTTATAGAAACTCGACAAAGGAA +
Preference number: 6 (lower is better)
Translates to: GRGTTLGDLGED*RTGPYRNSTKE
Trigger: TTCCTTTGTCGAGTTTCTATAAGGCCCTGTTCTCCAGTCTTCCCCTAAGTCGCCTAAAGTTGTCCCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CCA 72 bp GAAAAGGGTAGTGCTAGGAATAGACAGGGACAGGGTTaGAAAGTCCACATTAAATCACAGGCGAGGACCCTG +
Preference number: 6 (lower is better)
Translates to: EKGSARNRQGQG*KVHIKSQARTL
Trigger: CAGGGTCCTCGCCTGTGATTTAATGTGGACTTTCCAACCCTGTCCCTGTCTATTCCTAGCACTACCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 72 bp TACACTGGTCCACCCTCCACCTCAGAACCTAGGTTGTaGCAGGCTACACCCATCATATTCTGGTTCAAGAGA +
Preference number: 6 (lower is better)
Translates to: YTGPPSTSEPRL*QATPIIFWFKR
Trigger: TCTCTTGAACCAGAATATGATGGGTGTAGCCTGCAACAACCTAGGTTCTGAGGTGGAGGGTGGACCAGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS GCA 72 bp ATGGCCTTAGGTAAATACCTAAATTTCTCCAGCACCTaGCAGCAAAGAGGGTCCCATCAGAAGGCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: MALGKYLNFSST*QQRGSHQKAGS
Trigger: TGAACCAGCCTTCTGATGGGACCCTCTTTGCTGGCAGGTGCTGGAGAAATTTAGGTATTTACCTAAGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677986.1
ENST00000678848.1
CDS CCA 72 bp CTGTGGGTAAATACTGAGATGTTCAATGGGGGAATTTaGCTGGAGATAGAGACTCTTAGGCCAAAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: LWVNTEMFNGGI*LEIETLRPKGQ
Trigger: CTGGCCCTTTGGCCTAAGAGTCTCTATCTCCAGCCAAATTCCCCCATTGAACATCTCAGTATTTACCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677986.1
ENST00000678848.1
CDS CAA 72 bp CTATACCTCCCAACTGCTCAAAGAATTCAGGGCACTTaGCCCCAGCCCAGTTTAGTTGGCTCTGAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: LYLPTAQRIQGT*PQPSLVGSEKK
Trigger: TTTCTTCTCAGAGCCAACTAAACTGGGCTGGGGCAAAGTGCCCTGAATTCTTTGAGCAGTTGGGAGGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000678074.1
ENST00000678705.1
ENST00000678848.1
CDS CAA 90 bp CAAAATCTCAAGCCACTTCATACCCCAACACTCCAGGGTTTGAACTaGGTCTCTGAACTTCCAGACCTGCCTCTGAAAGGCAGTGTAGTA +
Preference number: 6 (lower is better)
Translates to: QNLKPLHTPTLQGLN*VSELPDLPLKGSVV
Trigger: TACTACACTGCCTTTCAGAGGCAGGTCTGGAAGTTCAGAGACCAAGTTCAAACCCTGGAGTGTTGGGGTATGAAGTGGCTTGAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000677154.1
ENST00000678547.1
ENST00000679056.1
ENST00000679116.1
ENST00000679261.1
ENST00000679277.1
CDS TCA 72 bp CTTGAGGGGGACCTTGGCAAACTTTGTCTTCCTCTCTaGGATAAGATTCACAAACCTGGAGTTGAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: LEGDLGKLCLPL*DKIHKPGVEGE
Trigger: TTCTCCCTCAACTCCAGGTTTGTGAATCTTATCTCAGAGAGGAAGACAAAGTTTGCCAAGGTCCCCCTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 72 bp CTCAAACACTGTCTTGCAGGCAAGACTTCCTCCCCATaGGAATCGGAAATCTACCCTAGGGTACTAATCTAC +
Preference number: 6 (lower is better)
Translates to: LKHCLAGKTSSP*ESEIYPRVLIY
Trigger: GTAGATTAGTACCCTAGGGTAGATTTCCGATTCCAATGGGGAGGAAGTCTTGCCTGCAAGACAGTGTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CCA 72 bp AAATATCAGACCACCAAGAGACCCACAGAGATCACCTaGTCTGAATCCCTTCCTCCACATTCCAAGATAGAA +
Preference number: 6 (lower is better)
Translates to: KYQTTKRPTEIT*SESLPPHSKIE
Trigger: TTCTATCTTGGAATGTGGAGGAAGGGATTCAGACCAGGTGATCTCTGTGGGTCTCTTGGTGGTCTGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 72 bp TCCGGCATCCTCTCCAAGTTGGGAGAAAGTCACTTTTaGGAGGTAATGGGTAAACCTCACAGATATAACAAG +
Preference number: 6 (lower is better)
Translates to: SGILSKLGESHF*EVMGKPHRYNK
Trigger: CTTGTTATATCTGTGAGGTTTACCCATTACCTCCAAAAAGTGACTTTCTCCCAACTTGGAGAGGATGCCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 90 bp ACTAGTCCCTCCGGCATCCTCTCCAAGTTGGGAGAAAGTCACTTTTaGGAGGTAATGGGTAAACCTCACAGATATAACAAGAGAATTGTT +
Preference number: 6 (lower is better)
Translates to: TSPSGILSKLGESHF*EVMGKPHRYNKRIV
Trigger: AACAATTCTCTTGTTATATCTGTGAGGTTTACCCATTACCTCCAAAAAGTGACTTTCTCCCAACTTGGAGAGGATGCCGGAGGGACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS TCA 72 bp ACAGCCCAAGGAACCATTTTATTCCAAACACTTTGCTaGGTTACTGAAACCCTGCATTTCCACTTTTCCACC +
Preference number: 6 (lower is better)
Translates to: TAQGTILFQTLC*VTETLHFHFST
Trigger: GGTGGAAAAGTGGAAATGCAGGGTTTCAGTAACTCAGCAAAGTGTTTGGAATAAAATGGTTCCTTGGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS TCA 72 bp TTAATGAGAGTCTGCCCTATAATGAAGCCATACAGATaGATAAGACACTGCTCTAGCCTTGAACAGTTCGGT +
Preference number: 6 (lower is better)
Translates to: LMRVCPIMKPYR*IRHCSSLEQFG
Trigger: ACCGAACTGTTCAAGGCTAGAGCAGTGTCTTATTCATCTGTATGGCTTCATTATAGGGCAGACTCTCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678848.1
CDS CAA 72 bp CTAATCCTGGTTCTATCATTAACTGTATATGTGACTTaGGGCCTGTCCCTTCACTCATCCATGGCTTCAATT +
Preference number: 6 (lower is better)
Translates to: LILVLSLTVYVT*GLSLHSSMASI
Trigger: AATTGAAGCCATGGATGAGTGAAGGGACAGGCCCAAAGTCACATATACAGTTAATGATAGAACCAGGATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677986.1
ENST00000678848.1
CDS CCA 72 bp ATGAGGAGAGGCAATGAGTTACAGAAGAAAGATAACTaGGAGATCCAGGTACTAATCCTGGTTCTATCATTA +
Preference number: 6 (lower is better)
Translates to: MRRGNELQKKDN*EIQVLILVLSL
Trigger: TAATGATAGAACCAGGATTAGTACCTGGATCTCCCAGTTATCTTTCTTCTGTAACTCATTGCCTCTCCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677986.1
ENST00000678848.1