RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LARP4B (Homo sapiens)

Ensembl gene IDs: ENSG00000107929

Ensembl transcript IDs: ENST00000316157.8, ENST00000406525.6, ENST00000412411.1, ENST00000440895.2, ENST00000448368.5, ENST00000469487.1, ENST00000476529.5, ENST00000481118.1, ENST00000608970.1, ENST00000609318.5, ENST00000614908.4

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGCGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTaGAGCCCTGTAGTGGGCCGCGAGGCACGCAAGCCGCAACTACAG +
Preference number: 1 (lower is better)
Translates to: PRCELLAASALASIV*SPVVGREARKPQLQ
Trigger: CTGTAGTTGCGGCTTGCGTGCCTCGCGGCCCACTACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp ACAAAAACGAAACCCTCGAGGAGCGACCACATGACCCCCGCGCTGTaGGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCC +
Preference number: 1 (lower is better)
Translates to: TKTKPSRSDHMTPAL*AAGGQRPRLDCLQP
Trigger: GGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCGCGGGGGTCATGTGGTCGCTCCTCGAGGGTTTCGTTTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp GGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATGGCGCCCTaGCCCTTCCGTAGCGAAGATGCAGCTCGTAGGCCCAGGCCTCGA +
Preference number: 1 (lower is better)
Translates to: GGRAGLVFWEWLMAP*PFRSEDAARRPRPR
Trigger: TCGAGGCCTGGGCCTACGAGCTGCATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp CCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTaGCCAGCCACCTCCTCCCATGCAGCACTCACACCGTCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: PSPLASDPCGPRSAW*PATSSHAALTPSAA
Trigger: TGCTGCTGACGGTGTGAGTGCTGCATGGGAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR CCA 90 bp AACGGCTTAGGTGGAAGCACAGCTCCCACATCAGCACTGATGCCCTaGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTGCCTCTGCC +
Preference number: 1 (lower is better)
Translates to: NGLGGSTAPTSALMP*RGQHCLYEATPASA
Trigger: GGCAGAGGCAGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCTGTGCTTCCACCTAAGCCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp GGGTCCGACTCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTaGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCT +
Preference number: 1 (lower is better)
Translates to: GSDSCGSGNAAFSWP*SPSPLASDPCGPRS
Trigger: AGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR CCA 90 bp TCTGCATCTGCATCTCCTGGACGCTCACTGATCTGCCCCAGGGCCTaGTGGTTGCTGTCCCAGCTTGGTCCTGCAAGCCCCTCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: SASASPGRSLICPRA*WLLSQLGPASPSGW
Trigger: CCACCCAGAGGGGCTTGCAGGACCAAGCTGGGACAGCAACCACCAGGCCCTGGGGCAGATCAGTGAGCGTCCAGGAGATGCAGATGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 90 bp AAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTaGTGGCGCCCTGGCCCTTCCGTAGCGAAGATGCAGCTCGTAGGC +
Preference number: 1 (lower is better)
Translates to: KDSLADGQALCFGNG*WRPGPSVAKMQLVG
Trigger: GCCTACGAGCTGCATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR GCA 90 bp GAGGGACCCAGAGCGAGAGCGTTCATGTCTGCTGGGTCCGACTCCTaGGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCA +
Preference number: 1 (lower is better)
Translates to: EGPRARAFMSAGSDS*GSGNAAFSWPWSPS
Trigger: TGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTCGCTCTGGGTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR CCA 90 bp GCCCTCCAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTaGCATATATGCTCCGAGACATCACACACTTGGATATGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: ALQLHQGRAKPLRLA*HICSETSHTWIWPG
Trigger: CCCAGGCCATATCCAAGTGTGTGATGTCTCGGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 90 bp CTGCGGCCCTCCAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTaGCCTGGCATATATGCTCCGAGACATCACACACTTGGATATGGC +
Preference number: 1 (lower is better)
Translates to: LRPSSSTRAGLSLSG*PGIYAPRHHTLGYG
Trigger: GCCATATCCAAGTGTGTGATGTCTCGGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTGGAGGGCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 90 bp CGAGCCCTGGCTCTCTTGTGGGACCTGCTGACCCCAGCAGAGCCCTaGAGACAATCCACAGATACACGGTGGTCACTTCCATCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: RALALLWDLLTPAEP*RQSTDTRWSLPSRE
Trigger: CTCCCTGGATGGAAGTGACCACCGTGTATCTGTGGATTGTCTGCAGGGCTCTGCTGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 90 bp TGCACGCTTAGGCTGTGCCCTTCCTTCCTGGCCTATGGTCTCACCTaGTGTCCCTCCTCTCCGTGGTGGAGACACCCACACACCTTCGTC +
Preference number: 1 (lower is better)
Translates to: CTLRLCPSFLAYGLT*CPSSPWWRHPHTFV
Trigger: GACGAAGGTGTGTGGGTGTCTCCACCACGGAGAGGAGGGACAGCAGGTGAGACCATAGGCCAGGAAGGAAGGGCACAGCCTAAGCGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 90 bp AACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATaGCTGATGGCGCCCTGGCCCTTCCGTAGCGAAGATGCAGCTCGT +
Preference number: 1 (lower is better)
Translates to: NQGLTGGRAGLVFWE*LMAPWPFRSEDAAR
Trigger: ACGAGCTGCATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp CAGAGCGAGAGCGTTCATGTCTGCTGGGTCCGACTCCTGCGGGTCTaGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGGC +
Preference number: 1 (lower is better)
Translates to: QSESVHVCWVRLLRV*QCGILMALVTITIG
Trigger: GCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTCGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR TCA 90 bp TTCGGCTGGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTaGATGAAAATGCATCTCTGTGGGCCCTCACAGGCCCACGCAGAG +
Preference number: 1 (lower is better)
Translates to: FGWEKRLLRPRKSWS*MKMHLCGPSQAHAE
Trigger: CTCTGCGTGGGCCTGTGAGGGCCCACAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 90 bp GAGAGCGTTCATGTCTGCTGGGTCCGACTCCTGCGGGTCTGGCAATaGGGCATTCTCATGGCCCTGGTCACCATCACCATTGGCATCCGA +
Preference number: 1 (lower is better)
Translates to: ESVHVCWVRLLRVWQ*GILMALVTITIGIR
Trigger: TCGGATGCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR GCA 90 bp AGATGTCCACACGGAGCTGAAGATGTGGACTCTCTCCAACCAGAGTaGTGGGGAACACGGACAGAAATGTGCACAGAGCAGGGCCGGGGC +
Preference number: 1 (lower is better)
Translates to: RCPHGAEDVDSLQPE*WGTRTEMCTEQGRG
Trigger: GCCCCGGCCCTGCTCTGTGCACATTTCTGTCCGTGTTCCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGTGTGGACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp CCAGCACTGCCTCTACGAGGCCACACCTGCCTCTGCCAAGGCCACTaGCCCTCATTCATCTGCGGGGACGTTCTAGAGATATGCACTTAC +
Preference number: 1 (lower is better)
Translates to: PALPLRGHTCLCQGH*PSFICGDVLEICTY
Trigger: GTAAGTGCATATCTCTAGAACGTCCCCGCAGATGAATGAGGGCCAGTGGCCTTGGCAGAGGCAGGTGTGGCCTCGTAGAGGCAGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp TGTCCACACGGAGCTGAAGATGTGGACTCTCTCCAACCAGAGTGCTaGGGAACACGGACAGAAATGTGCACAGAGCAGGGCCGGGGCCAT +
Preference number: 1 (lower is better)
Translates to: CPHGAEDVDSLQPEC*GTRTEMCTEQGRGH
Trigger: ATGGCCCCGGCCCTGCTCTGTGCACATTTCTGTCCGTGTTCCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGTGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp CGTGGTGGAGACACCCACACACCTTCGTCTAAGCAGACCAGCAGTTaGCTTGGATCGGAAACGGCTTGTGCCCAAGCAGGCCCAGCAACA +
Preference number: 1 (lower is better)
Translates to: RGGDTHTPSSKQTSS*LGSETACAQAGPAT
Trigger: TGTTGCTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTCTGCTTAGACGAAGGTGTGTGGGTGTCTCCACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 90 bp ATTAAAAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTaGGAATGGCTGATGGCGCCCTGGCCCTTCCGTAGCGAAGATGCA +
Preference number: 1 (lower is better)
Translates to: IKNQGLTGGRAGLVF*EWLMAPWPFRSEDA
Trigger: TGCATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTTTTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp ATCCATGTGCTGATGCAGAGGTACAGGGAGATGTCCACACGGAGCTaGAGATGTGGACTCTCTCCAACCAGAGTGCTGGGGAACACGGAC +
Preference number: 1 (lower is better)
Translates to: IHVLMQRYREMSTRS*RCGLSPTRVLGNTD
Trigger: GTCCGTGTTCCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGTGTGGACATCTCCCTGTACCTCTGCATCAGCACATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp CACCCGCCAGTGACAGCCGGTGATGTGATGACAGGAGGGCCTGGGTaGAAATGTCAAGACACTCACTCTCAGAGAACGACGACTCCACTT +
Preference number: 1 (lower is better)
Translates to: HPPVTAGDVMTGGPG*KCQDTHSQRTTTPL
Trigger: AAGTGGAGTCGTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATCACATCACCGGCTGTCACTGGCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp TATAGCAACGCAGGACGTTTACGGCCACCCGCCAGTGACAGCCGGTaGTGTGATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCA +
Preference number: 1 (lower is better)
Translates to: YSNAGRLRPPASDSR*CDDRRAWVKMSRHS
Trigger: TGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATCACATCACCGGCTGTCACTGGCGGGTGGCCGTAAACGTCCTGCGTTGCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp ACACACTTGGATATGGCCTGGGCTGACATAAGTTCCATAAGCACCTaGAGGCTGGTGCACGAGGGTCTCTGGCTAAGCCACTGCACGCTT +
Preference number: 1 (lower is better)
Translates to: THLDMAWADISSIST*RLVHEGLWLSHCTL
Trigger: AAGCGTGCAGTGGCTTAGCCAGAGACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACTTATGTCAGCCCAGGCCATATCCAAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 90 bp GAAAATGCATCTCTGTGGGCCCTCACAGGCCCACGCAGAGGTGAATaGATTTGGCTGTCTTCTGCATCTGCATCTCCTGGACGCTCACTG +
Preference number: 1 (lower is better)
Translates to: ENASLWALTGPRRGE*IWLSSASASPGRSL
Trigger: CAGTGAGCGTCCAGGAGATGCAGATGCAGAAGACAGCCAAATTCATTCACCTCTGCGTGGGCCTGTGAGGGCCCACAGAGATGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 90 bp GCTGATGCAGAGGTACAGGGAGATGTCCACACGGAGCTGAAGATGTaGACTCTCTCCAACCAGAGTGCTGGGGAACACGGACAGAAATGT +
Preference number: 1 (lower is better)
Translates to: ADAEVQGDVHTELKM*TLSNQSAGEHGQKC
Trigger: ACATTTCTGTCCGTGTTCCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGTGTGGACATCTCCCTGTACCTCTGCATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp TATGCTTACTCAGTAAAACTAGCGACAGGAGATCCACGCAGTAACTaGGTAACTCTGACCCACTCACGCCAACCCAGGGCCGGGCTCCAT +
Preference number: 1 (lower is better)
Translates to: YAYSVKLATGDPRSN*VTLTHSRQPRAGLH
Trigger: ATGGAGCCCGGCCCTGGGTTGGCGTGAGTGGGTCAGAGTTACTCAGTTACTGCGTGGATCTCCTGTCGCTAGTTTTACTGAGTAAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp TCACCTCCGAGCAACGTTTCAGTTCTTGATGCAGAAGACTGCTGCTaGCTAGGCAGTAACTACAGTGTATTGACCGGAGGGCAGCAGAGC +
Preference number: 1 (lower is better)
Translates to: SPPSNVSVLDAEDCC*LGSNYSVLTGGQQS
Trigger: GCTCTGCTGCCCTCCGGTCAATACACTGTAGTTACTGCCTAGCCAGCAGCAGTCTTCTGCATCAAGAACTGAAACGTTGCTCGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp GCATGCACCACCACTACCCGTCGCCCGGATACACTGAACTGGTTTTaGAGCCTGAACTGCAGAGATCCTAATATAGCAACGCAGGACGTT +
Preference number: 1 (lower is better)
Translates to: ACTTTTRRPDTLNWF*SLNCRDPNIATQDV
Trigger: AACGTCCTGCGTTGCTATATTAGGATCTCTGCAGTTCAGGCTTCAAAACCAGTTCAGTGTATCCGGGCGACGGGTAGTGGTGGTGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp GGCATATATGCTCCGAGACATCACACACTTGGATATGGCCTGGGCTaGCATAAGTTCCATAAGCACCTGAAGGCTGGTGCACGAGGGTCT +
Preference number: 1 (lower is better)
Translates to: GIYAPRHHTLGYGLG*HKFHKHLKAGARGS
Trigger: AGACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACTTATGTCAGCCCAGGCCATATCCAAGTGTGTGATGTCTCGGAGCATATATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 90 bp AAATCACCTCCGAGCAACGTTTCAGTTCTTGATGCAGAAGACTGCTaGTGGCTAGGCAGTAACTACAGTGTATTGACCGGAGGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: KSPPSNVSVLDAEDC*WLGSNYSVLTGGQQ
Trigger: CTGCTGCCCTCCGGTCAATACACTGTAGTTACTGCCTAGCCAGCAGCAGTCTTCTGCATCAAGAACTGAAACGTTGCTCGGAGGTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp GTAATTGGTCCATACGCAACAGTTAGAAGACTGAGGCTGGCAGAGTaGATTACAAACACCCACCACTCCGTGCTGTCCACAGACAACTCC +
Preference number: 1 (lower is better)
Translates to: VIGPYATVRRLRLAE*ITNTHHSVLSTDNS
Trigger: GGAGTTGTCTGTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCCTCAGTCTTCTAACTGTTGCGTATGGACCAATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTaGGGGAAAGGACTTCTCATTATTAAAAACCAAGGACTCACTGGC +
Preference number: 1 (lower is better)
Translates to: LALTTHTHCAAMLTP*GKGLLIIKNQGLTG
Trigger: GCCAGTGAGTCCTTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp CTGAGTAACTCTGACCCACTCACGCCAACCCAGGGCCGGGCTCCATaGACTCTAAGCTGTCTTATACAAAAGTTAAGGCAAAGTCATTTT +
Preference number: 1 (lower is better)
Translates to: LSNSDPLTPTQGRAP*TLSCLIQKLRQSHF
Trigger: AAAATGACTTTGCCTTAACTTTTGTATAAGACAGCTTAGAGTCCATGGAGCCCGGCCCTGGGTTGGCGTGAGTGGGTCAGAGTTACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 90 bp AGACAATCCACAGATACACGGTGGTCACTTCCATCCAGGGAGTTCTaGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCT +
Preference number: 1 (lower is better)
Translates to: RQSTDTRWSLPSREF*QGLLCGNSKSIPHP
Trigger: AGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTCCCTGGATGGAAGTGACCACCGTGTATCTGTGGATTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 90 bp GCATCCTTGTTCTTCAGAAGTGCAGCACTTCTGGAAGTGAATCAATaGGGCCCTCGTCTTGGAGGTAAAAGAGCAGGAACTTTATCCTCC +
Preference number: 1 (lower is better)
Translates to: ASLFFRSAALLEVNQ*GPRLGGKRAGTLSS
Trigger: GGAGGATAAAGTTCCTGCTCTTTTACCTCCAAGACGAGGGCCTCATTGATTCACTTCCAGAAGTGCTGCACTTCTGAAGAACAAGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp CAAACACCATTCTCTCACGATTACATAACTCTTAAATCCATGTGCTaGTGCAGAGGTACAGGGAGATGTCCACACGGAGCTGAAGATGTG +
Preference number: 1 (lower is better)
Translates to: QTPFSHDYITLKSMC*CRGTGRCPHGAEDV
Trigger: CACATCTTCAGCTCCGTGTGGACATCTCCCTGTACCTCTGCATCAGCACATGGATTTAAGAGTTATGTAATCGTGAGAGAATGGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp ACTTTAGTGCATCCTTGTTCTTCAGAAGTGCAGCACTTCTGGAAGTaGATCAATGAGGCCCTCGTCTTGGAGGTAAAAGAGCAGGAACTT +
Preference number: 1 (lower is better)
Translates to: TLVHPCSSEVQHFWK*INEALVLEVKEQEL
Trigger: AAGTTCCTGCTCTTTTACCTCCAAGACGAGGGCCTCATTGATTCACTTCCAGAAGTGCTGCACTTCTGAAGAACAAGGATGCACTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp GTGAAAATGTCAAGACACTCACTCTCAGAGAACGACGACTCCACTTaGAATTCATGTCTGGTGAAACGGGACCAGGTTTTTATTCTTCTA +
Preference number: 1 (lower is better)
Translates to: VKMSRHSLSENDDST*NSCLVKRDQVFILL
Trigger: TAGAAGAATAAAAACCTGGTCCCGTTTCACCAGACATGAATTTCAAGTGGAGTCGTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 90 bp ATCTGTATCAGAATTTTCTCTGTAGGGTACCTTTTTCATATGTTCTaGTTATTTACAACTGTACAAGCGAAGCACACTCCAAGTGCACGT +
Preference number: 1 (lower is better)
Translates to: ICIRIFSVGYLFHMF*LFTTVQAKHTPSAR
Trigger: ACGTGCACTTGGAGTGTGCTTCGCTTGTACAGTTGTAAATAATCAGAACATATGAAAAAGGTACCCTACAGAGAAAATTCTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTACTCTGCCAAGGCCACTaGCCCTCATTCATCTGCGGG +
Preference number: 2 (lower is better)
Translates to: RCELLAASALASIVCSPVLCQGH*PSFICG
Trigger: CCCGCAGATGAATGAGGGCCAGTGGCCTTGGCAGAG...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CAA 90 bp TCTGCATCTCCTGGACGCTCACTGATCTGCCCCAGGGCCTGGTGGTaGCTGTCCCAGCTTGGTCCTGCAAGCCCCTCTGGGTGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: SASPGRSLICPRAWW*LSQLGPASPSGWSC
Trigger: GCAGCTCCACCCAGAGGGGCTTGCAGGACCAAGCTGGGACAGCAACCACCAGGCCCTGGGGCAGATCAGTGAGCGTCCAGGAGATGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp TCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGCTGCGGGCCACGGTCTaGGTGGTGGCCAGCCACCTC +
Preference number: 2 (lower is better)
Translates to: SCGSGNAAFSWPWSPSPLLRATV*VVASHL
Trigger: GAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAG...CAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR-3UTR TCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTACAGCACTTCTGGAAGTaGATCAATGAGGCCCTCGTC +
Preference number: 2 (lower is better)
Translates to: RCELLAASALASIVCSPVQHFWK*INEALV
Trigger: GACGAGGGCCTCATTGATTCACTTCCAGAAGTGCTG...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CCA 90 bp GCAGAGAGTCATATTCTGAGGGACCCAGAGCGAGAGCGTTCATGTCTGCTGGGTGGGCCACGGTCTGCGTaGTGGCCAGCCACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: AESHILRDPERERSCLLGGPRSA*WPATSS
Trigger: GGAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCC...ACCCAGCAGACATGAACGCTCTCGCTCTGGGTCCCTCAGAATATGACTCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR CAA 90 bp CCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTaGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTT +
Preference number: 2 (lower is better)
Translates to: PNQRLALALSGRVSR*WLTQRSATPPRRTV
Trigger: AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
3UTR-3UTR CCA 90 bp ACACCCACCACTCCGTGCTGTCCACAGACAACTCCCTTCAGACAGGGCACAGGCACAGTGAGCTTCGGCTaGGAAAAGCGGCTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: TPTTPCCPQTTPFRQGTGTVSFG*EKRLLR
Trigger: CCGGAGCAGCCGCTTTTCCCAGCCGAAGCTCACTGT...GCCTGTGCCCTGTCTGAAGGGAGTTGTCTGTGGACAGCACGGAGTGGTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTTGGCGCGGCCAGCACTaGCTCTACGAGGCCACACCT +
Preference number: 2 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTWRGQH*LYEATP
Trigger: AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCA...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR GCA 90 bp GCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGCACCGTCAGCAGCACTaGTTGCTTCCAGATGTAACA +
Preference number: 2 (lower is better)
Translates to: ALVTITIGIRSLRATVCVHRQQH*LLPDVT
Trigger: TGTTACATCTGGAAGCAAGCAGTGCTGCTGACGGTG...CACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR-3UTR CCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCAGAGTGTCTCGTTTGTaGTTAACACAGCGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: SSHISTDALARPALPLRGRVSRL*LTQRSA
Trigger: CGCAGAGCGCTGTGTTAACCACAAACGAGACACTCT...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CAA 90 bp CAGTGGCGACTGGCTAATGCACGCGCTGCCCTCCTCATGCAGCTGTaGAGCTCCCACTTCGGTCGACAAAGTGAAGGACTAAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: QWRLANARAALLMQL*SSHFGRQSEGLSWL
Trigger: GAGCCAGCTTAGTCCTTCACTTTGTCGACCGAAGTGGGAGCTCAACAGCTGCATGAGGAGGGCAGCGCGTGCATTAGCCAGTCGCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR TCA 90 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTGGCTAATGCACGCGCTGGATCCACGCAGTAACTaGGTAACTCTGACCCACTCA +
Preference number: 2 (lower is better)
Translates to: IDRRAAEPSSGDWLMHALDPRSN*VTLTHS
Trigger: TGAGTGGGTCAGAGTTACTCAGTTACTGCGTGGATC...CAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR GCA 90 bp ACAGACAACTCCCTTCAGACAGGGCACAGGCGGGCTAAAAGTCAAAGGATGAAAGAGCTGCTCACCCCGTaGTCCGGGGCTCACGCCTGC +
Preference number: 2 (lower is better)
Translates to: TDNSLQTGHRRAKSQRMKELLTP*SGAHAC
Trigger: GCAGGCGTGAGCCCCGGAGCACGGGGTGAGCAGCTC...TTTCATCCTTTGACTTTTAGCCCGCCTGTGCCCTGTCTGAAGGGAGTTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp CAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATGCTCCGAGACATCACACACTTaGATATGGCCTGGGCTGACA +
Preference number: 2 (lower is better)
Translates to: QLHQGRAKPLRLAWHICSETSHT*IWPGLT
Trigger: TGTCAGCCCAGGCCATATCCAAGTGTGTGATGTCTC...GGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 90 bp GTGGAGACACCCACACACCTTCGTCTAAGCAGACCAGCAGTTGACTaGGATCGGAAACGGCTTGTGCCCAAGCAGGCCCAGCAACACACG +
Preference number: 2 (lower is better)
Translates to: VETPTHLRLSRPAVD*DRKRLVPKQAQQHT
Trigger: CGTGTGTTGCTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTCTGCTTAGACGAAGGTGTGTGGGTGTCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp CTGTCTTCTGCATCTGCATCTCCTGGACGCTCACTGATCTGCCCCAGGGCCTGGACCCCAGCAGAGCCCTaGAGACAATCCACAGATACA +
Preference number: 2 (lower is better)
Translates to: LSSASASPGRSLICPRAWTPAEP*RQSTDT
Trigger: TGTATCTGTGGATTGTCTGCAGGGCTCTGCTGGGGT...CCAGGCCCTGGGGCAGATCAGTGAGCGTCCAGGAGATGCAGATGCAGAAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp GTCTCGCTATTTTCAGGCAGAGAGTCATATTCTGAGGGACCCAGAGCGAGAGCGAGCCACCTCCTCCCATaGAGCACTCACACCGTCAGC +
Preference number: 2 (lower is better)
Translates to: VSLFSGRESYSEGPRARASHLLP*STHTVS
Trigger: GCTGACGGTGTGAGTGCTGCATGGGAGGAGGTGGCT...CGCTCTCGCTCTGGGTCCCTCAGAATATGACTCTCTGCCTGAAAATAGCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR-3UTR GCA 90 bp CATAAGTTCCATAAGCACCTGAAGGCTGGTGCACGAGGGTCTCTGGCTAAGCCAGCCTATGGTCTCACCTaGTGTCCCTCCTCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: HKFHKHLKAGARGSLAKPAYGLT*CPSSPW
Trigger: CCACGGAGAGGAGGGACAGCAGGTGAGACCATAGGC...TGGCTTAGCCAGAGACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACTTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAACGCCCTCGCACTGAGTaGGAGAGTGTCTCGTTTGTG +
Preference number: 2 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKRPRTE*ESVSFV
Trigger: CACAAACGAGACACTCTCCCACTCAGTGCGAGGGCG...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR GCA 90 bp AAGACTGAGGCTGGCAGAGTGGATTACAAACACCCACCACTCCGTGCTGTCCACTGCACGCTTAGGCTGTaGCCTTCCTTCCTGGCCTAT +
Preference number: 2 (lower is better)
Translates to: KTEAGRVDYKHPPLRAVHCTLRL*PSFLAY
Trigger: ATAGGCCAGGAAGGAAGGGCACAGCCTAAGCGTGCA...GTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCCTCAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTATCTTGTACTACAGTATaGTTACTCAGTAAAACTAGC +
Preference number: 2 (lower is better)
Translates to: RCELLAASALASIVCSPVSCTTV*LLSKTS
Trigger: GCTAGTTTTACTGAGTAAGCATACTGTAGTACAAGA...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATTACCAACGGCTTAGGTaGAAGCACAGCTCCCACATC +
Preference number: 2 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADYQRLR*KHSSHI
Trigger: GATGTGGGAGCTGTGCTTCCACCTAAGCCGTTGGTA...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CCA 90 bp GCTTGTGCCCAAGCAGGCCCAGCAACACACGTGGTCCTTCTTCAGTTGGTTCAACCATCCAGGGAGTTCTaGCAGGGTTTGTTATGTGGC +
Preference number: 2 (lower is better)
Translates to: ACAQAGPATHVVLLQLVQPSREF*QGLLCG
Trigger: GCCACATAACAAACCCTGCCAGAACTCCCTGGATGG...TTGAACCAACTGAAGAAGGACCACGTGTGTTGCTGGGCCTGCTTGGGCACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp GTTGACTTGGATCGGAAACGGCTTGTGCCCAAGCAGGCCCAGCAACACACGTGGAACAACTTCAGACTTTaGTGGGTGGAGGCGGAATAC +
Preference number: 2 (lower is better)
Translates to: VDLDRKRLVPKQAQQHTWNNFRL*WVEAEY
Trigger: GTATTCCGCCTCCACCCACCAAAGTCTGAAGTTGTT...CCACGTGTGTTGCTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp TGTCCCAGCTTGGTCCTGCAAGCCCCTCTGGGTGGAGCTGCTCACCCCGTGCTCGGATATAGCAAGGAATaGAATACAACAACTTCAGAC +
Preference number: 2 (lower is better)
Translates to: CPSLVLQAPLGGAAHPVLGYSKE*NTTTSD
Trigger: GTCTGAAGTTGTTGTATTCCATTCCTTGCTATATCC...GAGCACGGGGTGAGCAGCTCCACCCAGAGGGGCTTGCAGGACCAAGCTGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp TCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCAGTCCAACGGACGCTCACTGATCTaGCCCAGGGCCTGGTGGTTG +
Preference number: 2 (lower is better)
Translates to: SEQRQLLGSRVLMTDQSNGRSLI*PRAWWL
Trigger: CAACCACCAGGCCCTGGGGCAGATCAGTGAGCGTCC...GTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp AAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATGAAAATGCATCTCTGTCCACAGATACACGGTaGTCACTTCCATCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: KAAAPAEEILVVNENASLSTDTR*SLPSRE
Trigger: CTCCCTGGATGGAAGTGACCACCGTGTATCTGTGGA...CAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp ACAGACAACTCCCTTCAGACAGGGCACAGGCGGGCTAAAAGTCAAAGGATGAAATTCCTTCCTGGCCTATaGTCTCACCTGCTGTCCCTC +
Preference number: 2 (lower is better)
Translates to: TDNSLQTGHRRAKSQRMKFLPGL*SHLLSL
Trigger: GAGGGACAGCAGGTGAGACCATAGGCCAGGAAGGAA...TTTCATCCTTTGACTTTTAGCCCGCCTGTGCCCTGTCTGAAGGGAGTTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR TCA 90 bp GAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGCTCCTGGACGCTCACTaGTCTGCCCCAGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: ELECLCYCQNFRAKTITWLLDAH*SAPGPG
Trigger: ACCAGGCCCTGGGGCAGATCAGTGAGCGTCCAGGAG...CCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAACACGGACAGAAATGTaGACAGAGCAGGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQTRTEM*TEQGRG
Trigger: GCCCCGGCCCTGCTCTGTGCACATTTCTGTCCGTGT...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CCA 90 bp AAACGGCACGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTCTAAGCCTCTCCGGCTaGCCTGGCATATATGCTCCG +
Preference number: 2 (lower is better)
Translates to: KRHVTPTGVKKKELECLCLSLSG*PGIYAP
Trigger: CGGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAG...ACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACGTGCCGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR TCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATTACATAATAGCCACTTaGAACTGGAGTGAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADYIIAT*NWSEKL
Trigger: CAGCTTCTCACTCCAGTTTCAAGTGGCTATTATGTA...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR TCA 90 bp AGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCAGTCCAACGAGAAGACAAGTTCCATAAGCACCTaGAGGCTGGTGCACGAGGGT +
Preference number: 2 (lower is better)
Translates to: RQLLGSRVLMTDQSNEKTSSIST*RLVHEG
Trigger: ACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACT...TGTCTTCTCGTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp GAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGGCCCTGGCTCTCTTGTaGGACCTGCTGACCCCAGCA +
Preference number: 2 (lower is better)
Translates to: ELECLCYCQNFRAKTITWALALL*DLLTPA
Trigger: TGCTGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGC...CCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp AGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCAGTCCAACGAGAAGACATGTGCCCTTCCTTCCTaGCCTATGGTCTCACCTGCT +
Preference number: 2 (lower is better)
Translates to: RQLLGSRVLMTDQSNEKTCALPS*PMVSPA
Trigger: AGCAGGTGAGACCATAGGCCAGGAAGGAAGGGCACA...TGTCTTCTCGTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 90 bp ACAGATACACGGTGGTCACTTCCATCCAGGGAGTTCTGGCAGGGTTaGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTCTTCC +
Preference number: 2 (lower is better)
Translates to: TDTRWSLPSREFWQG*LCGNSKSIPHPSSS
Trigger: GGAAGAACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTCCCTGGATGGAAGTGACCACCGTGTATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATTCACTATATATAGCTTaGATTCAGAGCCACATGGAG +
Preference number: 2 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADSLYIA*IQSHME
Trigger: CTCCATGTGGCTCTGAATGCAAGCTATATATAGTGA...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR GCA 90 bp AAGACTGAGGCTGGCAGAGTGGATTACAAACACCCACCACTCCGTGCTGTCCACGTTGGTTCAATCCAATaGTTTAGAGAAACACGGGAT +
Preference number: 2 (lower is better)
Translates to: KTEAGRVDYKHPPLRAVHVGSIQ*FRETRD
Trigger: ATCCCGTGTTTCTCTAAAGCATTGGATTGAACCAAC...GTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCCTCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 90 bp GCTTGTGCCCAAGCAGGCCCAGCAACACACGTGGTCCTTCTTCAGTaGGTTCAATCCAATGCTTTAGAGAAACACGGGATTTTAGCATTA +
Preference number: 2 (lower is better)
Translates to: ACAQAGPATHVVLLQ*VQSNALEKHGILAL
Trigger: TAATGCTAAAATCCCGTGTTTCTCTAAAGCATTGGATTGAACCAACTGAAGAAGGACCACGTGTGTTGCTGGGCCTGCTTGGGCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATGAAGCACACTCCAAGTaGACGTATTTAATACAGTAT +
Preference number: 2 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADEAHSK*TYLIQY
Trigger: ATACTGTATTAAATACGTGCACTTGGAGTGTGCTTC...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR GCA 90 bp CGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTTACTGTCAGCTGTCTTCTGCATCTaGATCTCCTGGACGCTCACT +
Preference number: 2 (lower is better)
Translates to: RYTDRSEKERAGMPLLLSAVFCI*ISWTLT
Trigger: AGTGAGCGTCCAGGAGATGCAGATGCAGAAGACAGC...TGACAGTAACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp ACAGACAACTCCCTTCAGACAGGGCACAGGCGGGCTAAAAGTCAAAGGATGAAACACTTGGATATGGCCTaGGCTGACATAAGTTCCATA +
Preference number: 2 (lower is better)
Translates to: TDNSLQTGHRRAKSQRMKHLDMA*ADISSI
Trigger: TATGGAACTTATGTCAGCCCAGGCCATATCCAAGTG...TTTCATCCTTTGACTTTTAGCCCGCCTGTGCCCTGTCTGAAGGGAGTTGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp CTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGGTCGAAAATGCATCTCTGTaGGCCCTCACAGGCCCACGC +
Preference number: 2 (lower is better)
Translates to: LECLCYCQNFRAKTITWVENASL*ALTGPR
Trigger: GCGTGGGCCTGTGAGGGCCCACAGAGATGCATTTTC...GACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR TCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCTCGCCCTCGCACTaGGTGGGAGAGTGTCTCGTT +
Preference number: 2 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGGSPSH*VGECLV
Trigger: AACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCC...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
3UTR-3UTR TCA 90 bp CGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTTACTGTCAGGATATGGCCTGGGCTaGCATAAGTTCCATAAGCAC +
Preference number: 2 (lower is better)
Translates to: RYTDRSEKERAGMPLLLSGYGLG*HKFHKH
Trigger: GTGCTTATGGAACTTATGTCAGCCCAGGCCATATCC...TGACAGTAACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACGACGTTCTAGAGATATaGACTTACAGACCAGTTACT +
Preference number: 2 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDDVLEI*TYRPVT
Trigger: AGTAACTGGTCTGTAAGTGCATATCTCTAGAACGTC...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CAA 90 bp AAAGATGTGGATATAGCAAGGAATGGAATACAACAACTTCAGACTTaGGTGGGTGGAGGCGGAATACGTAAACCTCTGACAGCCATGAGG +
Preference number: 2 (lower is better)
Translates to: KDVDIARNGIQQLQT*VGGGGIRKPLTAMR
Trigger: CCTCATGGCTGTCAGAGGTTTACGTATTCCGCCTCCACCCACCAAAGTCTGAAGTTGTTGTATTCCATTCCTTGCTATATCCACATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR GCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCACAGGCCTCAGACACTaGAAGCTCCTAACCAGCGGC +
Preference number: 2 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGTGLRH*KLLTSG
Trigger: GCCGCTGGTTAGGAGCTTGCAGTGTCTGAGGCCTGT...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
3UTR-3UTR CCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCCGCCCTCGCACTGAGTaGGAGAGTGTCTCGTTTGTG +
Preference number: 2 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGRPRTE*ESVSFV
Trigger: CACAAACGAGACACTCTCCCACTCAGTGCGAGGGCG...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
3UTR CAA 90 bp AAAAGTATGAAAGCCACTCTCATCGCTGTATGTGACACAGCACAGTaGGCATGGACCGCCACAGCTTCCTATTATGATAACTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: KSMKATLIAVCDTAQ*AWTATASYYDNSHF
Trigger: AAAATGAGAGTTATCATAATAGGAAGCTGTGGCGGTCCATGCCAACTGTGCTGTGTCACATACAGCGATGAGAGTGGCTTTCATACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CAA 90 bp GGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACGACTCCACTaGAAATTCATGTCTGGTGAAACGGGACCAGGTTTTTATTCTTCT +
Preference number: 2 (lower is better)
Translates to: GENVKTLTLRERRLH*KFMSGETGPGFYSS
Trigger: AGAAGAATAAAAACCTGGTCCCGTTTCACCAGACATGAATTTCAAGTGGAGTCGTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR GCA 90 bp GAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGAATTTGGCTGTCTTCTaGATCTGCATCTCCTGGACG +
Preference number: 2 (lower is better)
Translates to: ELECLCYCQNFRAKTITWNLAVF*ICISWT
Trigger: CGTCCAGGAGATGCAGATGCAGAAGACAGCCAAATT...CCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CCA 90 bp GTCAAAACTTCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATGCAGGGTTTGTTATGTaGCAACAGCAAGTCAATACC +
Preference number: 2 (lower is better)
Translates to: VKTSEQRQLLGSRVLMTDAGFVM*QQQVNT
Trigger: GGTATTGACTTGCTGTTGCCACATAACAAACCCTGC...ATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 72 bp GAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTaGAGCCCTGTAGTGGGCCGCGAGGCACGCAAGCCG +
Preference number: 3 (lower is better)
Translates to: ELLAASALASIV*SPVVGREARKP
Trigger: CGGCTTGCGTGCCTCGCGGCCCACTACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp GAGGAGCGACCACATGACCCCCGCGCTGTGAGCTGCTaGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: EERPHDPRAVSC*RPAPSPRLSAA
Trigger: GGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCGCGGGGGTCATGTGGTCGCTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR GCA 72 bp CTCGAGGAGCGACCACATGACCCCCGCGCTGTGAGCTaGTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: LEERPHDPRAVS*WRPAPSPRLSA
Trigger: TGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCGCGGGGGTCATGTGGTCGCTCCTCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp AAACCCTCGAGGAGCGACCACATGACCCCCGCGCTGTaGGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGT +
Preference number: 3 (lower is better)
Translates to: KPSRSDHMTPAL*AAGGQRPRLDC
Trigger: ACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCGCGGGGGTCATGTGGTCGCTCCTCGAGGGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp TTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTaGCCAGCCACCTCCTCCCATGCAGCACTCACACCG +
Preference number: 3 (lower is better)
Translates to: LASDPCGPRSAW*PATSSHAALTP
Trigger: CGGTGTGAGTGCTGCATGGGAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR GCA 72 bp GTGGAGCTGCTCACCCCGTGCTCCGGGGCTCACGCCTaGAGGGAGGCCCAGCCTGTATCAGGATCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: VELLTPCSGAHA*REAQPVSGSSS
Trigger: TGAAGAGGATCCTGATACAGGCTGGGCCTCCCTGCAGGCGTGAGCCCCGGAGCACGGGGTGAGCAGCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 72 bp CCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTaGTGGCCAGCCACCTCCTCCCATGCAGCACTCACA +
Preference number: 3 (lower is better)
Translates to: PLASDPCGPRSA*WPATSSHAALT
Trigger: TGTGAGTGCTGCATGGGAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR GCA 72 bp GCCACGGTCTGCGTGGTGGCCAGCCACCTCCTCCCATaGAGCACTCACACCGTCAGCAGCACTGCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: ATVCVVASHLLP*STHTVSSTACF
Trigger: GAAGCAAGCAGTGCTGCTGACGGTGTGAGTGCTGCATGGGAGGAGGTGGCTGGCCACCACGCAGACCGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR GCA 72 bp ATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTaGGTGGTGGCCAGCCACCTCCTCCCATGCAGCACT +
Preference number: 3 (lower is better)
Translates to: ITIGIRSLRATV*VVASHLLPCST
Trigger: AGTGCTGCATGGGAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR TCA 72 bp CTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTaGTGGCGCCCTGGCCCTTCCGTAGCGAAGATGCAG +
Preference number: 3 (lower is better)
Translates to: LADGQALCFGNG*WRPGPSVAKMQ
Trigger: CTGCATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp CAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTaGGAATGGCTGATGGCGCCCTGGCCCTTCCGTAGC +
Preference number: 3 (lower is better)
Translates to: QGLTGGRAGLVF*EWLMAPWPFRS
Trigger: GCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTaGCTAATGCACGCGCTGCCCTCCTCATGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: IDRRAAEPSSGD*LMHALPSSCSC
Trigger: ACAGCTGCATGAGGAGGGCAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CAA 90 bp ACACCCACCACTCCGTGCTGTCCACAGACAACTCCCTTCAGACAGGGCACAGGCCGAGCCCTGGCTCTCTaGTGGGACCTGCTGACCCCA +
Preference number: 3 (lower is better)
Translates to: TPTTPCCPQTTPFRQGTGRALAL*WDLLTP
Trigger: TGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGCTCG...GCCTGTGCCCTGTCTGAAGGGAGTTGTCTGTGGACAGCACGGAGTGGTGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CAA 90 bp ATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCACCTCCTCCGTCAGCAGCACTGCTaGCTTCCAGATGTAACACAG +
Preference number: 3 (lower is better)
Translates to: IGIRSLRATVCVVASHLLRQQHC*LPDVTQ
Trigger: CTGTGTTACATCTGGAAGCAAGCAGTGCTGCTGACG...GAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR GCA 72 bp AGAGCGAGAGCGTTCATGTCTGCTGGGTCCGACTCCTaGGGGTCTGGCAATGCGGCATTCTCATGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: RARAFMSAGSDS*GSGNAAFSWPW
Trigger: CCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTCGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR GCA 72 bp AGGCTGTGCCCTTCCTTCCTGGCCTATGGTCTCACCTaGTGTCCCTCCTCTCCGTGGTGGAGACACCCACAC +
Preference number: 3 (lower is better)
Translates to: RLCPSFLAYGLT*CPSSPWWRHPH
Trigger: GTGTGGGTGTCTCCACCACGGAGAGGAGGGACAGCAGGTGAGACCATAGGCCAGGAAGGAAGGGCACAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 72 bp GCAGGCCTTGTGTTTTGGGAATGGCTGATGGCGCCCTaGCCCTTCCGTAGCGAAGATGCAGCTCGTAGGCCC +
Preference number: 3 (lower is better)
Translates to: AGLVFWEWLMAP*PFRSEDAARRP
Trigger: GGGCCTACGAGCTGCATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp CTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATaGCTGATGGCGCCCTGGCCCTTCCGTAGCGAAGAT +
Preference number: 3 (lower is better)
Translates to: LTGGRAGLVFWE*LMAPWPFRSED
Trigger: ATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp TCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTaGTCACCATCACCATTGGCATCCGATCCCTGCGGG +
Preference number: 3 (lower is better)
Translates to: SCGSGNAAFSWP*SPSPLASDPCG
Trigger: CCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR TCA 72 bp AGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATaGAAATGCATCTCTGTGGGCCCTCACAGGCCCACG +
Preference number: 3 (lower is better)
Translates to: SGCSGRGNPGRE*KCISVGPHRPT
Trigger: CGTGGGCCTGTGAGGGCCCACAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 72 bp CTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTaGTTAACACAGCGCTCTGCGACCCCTCCCAGACGT +
Preference number: 3 (lower is better)
Translates to: LALALSGRVSRL*LTQRSATPPRR
Trigger: ACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
3UTR CCA 72 bp AGCGTTCATGTCTGCTGGGTCCGACTCCTGCGGGTCTaGCAATGCGGCATTCTCATGGCCCTGGTCACCATC +
Preference number: 3 (lower is better)
Translates to: SVHVCWVRLLRV*QCGILMALVTI
Trigger: GATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATGAACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR TCA 72 bp GCAGGACGTTTACGGCCACCCGCCAGTGACAGCCGGTaGTGTGATGACAGGAGGGCCTGGGTGAAAATGTCA +
Preference number: 3 (lower is better)
Translates to: AGRLRPPASDSR*CDDRRAWVKMS
Trigger: TGACATTTTCACCCAGGCCCTCCTGTCATCACATCACCGGCTGTCACTGGCGGGTGGCCGTAAACGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR GCA 72 bp CATGTCTGCTGGGTCCGACTCCTGCGGGTCTGGCAATaGGGCATTCTCATGGCCCTGGTCACCATCACCATT +
Preference number: 3 (lower is better)
Translates to: HVCWVRLLRVWQ*GILMALVTITI
Trigger: AATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
3UTR GCA 72 bp GGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATaGTCCGAGACATCACACACTTGGATATGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GRAKPLRLAWHI*SETSHTWIWPG
Trigger: CCCAGGCCATATCCAAGTGTGTGATGTCTCGGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 72 bp CCTCTACGAGGCCACACCTGCCTCTGCCAAGGCCACTaGCCCTCATTCATCTGCGGGGACGTTCTAGAGATA +
Preference number: 3 (lower is better)
Translates to: PLRGHTCLCQGH*PSFICGDVLEI
Trigger: TATCTCTAGAACGTCCCCGCAGATGAATGAGGGCCAGTGGCCTTGGCAGAGGCAGGTGTGGCCTCGTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp TCCAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTaGCCTGGCATATATGCTCCGAGACATCACACACTT +
Preference number: 3 (lower is better)
Translates to: SSSTRAGLSLSG*PGIYAPRHHTL
Trigger: AAGTGTGTGATGTCTCGGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CAA 90 bp GAGCTTCGGCTGGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATCGAGACATCACACACTaGGATATGGCCTGGGCTGAC +
Preference number: 3 (lower is better)
Translates to: ELRLGKAAAPAEEILVVNRDITH*DMAWAD
Trigger: GTCAGCCCAGGCCATATCCAAGTGTGTGATGTCTCG...ATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 72 bp GAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTaGATGAAAATGCATCTCTGTGGGCCCTCACAGGCC +
Preference number: 3 (lower is better)
Translates to: EKRLLRPRKSWS*MKMHLCGPSQA
Trigger: GGCCTGTGAGGGCCCACAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 72 bp CTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTaGCATATATGCTCCGAGACATCACACACTTGGATA +
Preference number: 3 (lower is better)
Translates to: LHQGRAKPLRLA*HICSETSHTWI
Trigger: TATCCAAGTGTGTGATGTCTCGGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 72 bp CTGATGCAGAGGTACAGGGAGATGTCCACACGGAGCTaGAGATGTGGACTCTCTCCAACCAGAGTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LMQRYREMSTRS*RCGLSPTRVLG
Trigger: CCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGTGTGGACATCTCCCTGTACCTCTGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp GACACCCACACACCTTCGTCTAAGCAGACCAGCAGTTaGCTTGGATCGGAAACGGCTTGTGCCCAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: DTHTPSSKQTSS*LGSETACAQAG
Trigger: GCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTCTGCTTAGACGAAGGTGTGTGGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 72 bp GGCTGGCAGAGTGGATTACAAACACCCACCACTCCGTaGTGTCCACAGACAACTCCCTTCAGACAGGGCACA +
Preference number: 3 (lower is better)
Translates to: GWQSGLQTPTTP*CPQTTPFRQGT
Trigger: TGTGCCCTGTCTGAAGGGAGTTGTCTGTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 72 bp CTTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTaGCCCCTGCAGGTTCACTCCGCCCAGGAGATCAAA +
Preference number: 3 (lower is better)
Translates to: LACSASEPRFLG*PLQVHSAQEIK
Trigger: TTTGATCTCCTGGGCGGAGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp GGAGCTGAAGATGTGGACTCTCTCCAACCAGAGTGCTaGGGAACACGGACAGAAATGTGCACAGAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: GAEDVDSLQPEC*GTRTEMCTEQG
Trigger: GCCCTGCTCTGTGCACATTTCTGTCCGTGTTCCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp GAGGTACAGGGAGATGTCCACACGGAGCTGAAGATGTaGACTCTCTCCAACCAGAGTGCTGGGGAACACGGA +
Preference number: 3 (lower is better)
Translates to: EVQGDVHTELKM*TLSNQSAGEHG
Trigger: TCCGTGTTCCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGTGTGGACATCTCCCTGTACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp CCAGCAGAGCCCTGCAGACAATCCACAGATACACGGTaGTCACTTCCATCCAGGGAGTTCTGGCAGGGTTTG +
Preference number: 3 (lower is better)
Translates to: PAEPCRQSTDTR*SLPSREFWQGL
Trigger: CAAACCCTGCCAGAACTCCCTGGATGGAAGTGACCACCGTGTATCTGTGGATTGTCTGCAGGGCTCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CAA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTACTGAGTATTGAGAGTTaGGGTTTCACAGATCAATTA +
Preference number: 3 (lower is better)
Translates to: RCELLAASALASIVCSPVLSIES*GFTDQL
Trigger: TAATTGATCTGTGAAACCCAAACTCTCAATACTCAG...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp GATATGGCCTGGGCTGACATAAGTTCCATAAGCACCTaGAGGCTGGTGCACGAGGGTCTCTGGCTAAGCCAC +
Preference number: 3 (lower is better)
Translates to: DMAWADISSIST*RLVHEGLWLSH
Trigger: GTGGCTTAGCCAGAGACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACTTATGTCAGCCCAGGCCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 72 bp TCTCTGTGGGCCCTCACAGGCCCACGCAGAGGTGAATaGATTTGGCTGTCTTCTGCATCTGCATCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: SLWALTGPRRGE*IWLSSASASPG
Trigger: TCCAGGAGATGCAGATGCAGAAGACAGCCAAATTCATTCACCTCTGCGTGGGCCTGTGAGGGCCCACAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 72 bp TGCATCTCTGTGGGCCCTCACAGGCCCACGCAGAGGTaGATGAATTTGGCTGTCTTCTGCATCTGCATCTCC +
Preference number: 3 (lower is better)
Translates to: CISVGPHRPTQR*MNLAVFCICIS
Trigger: GGAGATGCAGATGCAGAAGACAGCCAAATTCATTCACCTCTGCGTGGGCCTGTGAGGGCCCACAGAGATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 72 bp CACGGAGCTGAAGATGTGGACTCTCTCCAACCAGAGTaGTGGGGAACACGGACAGAAATGTGCACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: HGAEDVDSLQPE*WGTRTEMCTEQ
Trigger: CTGCTCTGTGCACATTTCTGTCCGTGTTCCCCAGCACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp CTCACATCCTATGTAGTAAACACAGTGAGCTTCGGCTaGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGG +
Preference number: 3 (lower is better)
Translates to: LTSYVVNTVSFG*EKRLLRPRKSW
Trigger: CCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAAGCTCACTGTGTTTACTACATAGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CAA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAAGGGAGAGTGTCTCGTTaGTGGTTAACACAGCGCTCT +
Preference number: 3 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKGRVSR*WLTQRS
Trigger: AGAGCGCTGTGTTAACCACAAACGAGACACTCTCCC...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp TCAGTAAAACTAGCGACAGGAGATCCACGCAGTAACTaGGTAACTCTGACCCACTCACGCCAACCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: SVKLATGDPRSN*VTLTHSRQPRA
Trigger: GGCCCTGGGTTGGCGTGAGTGGGTCAGAGTTACTCAGTTACTGCGTGGATCTCCTGTCGCTAGTTTTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CAA 90 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTGGCTAATGCACGCGCTGCGATCCTGCCAGTTTTaGCTCTCTATATACTTTAAA +
Preference number: 3 (lower is better)
Translates to: IDRRAAEPSSGDWLMHALRSCQF*LSIYFK
Trigger: TTTAAAGTATATAGAGAGCAAAAACTGGCAGGATCG...CAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CAA 90 bp AAACGGCACGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTTGGATCGGAAACGGCTaGTGCCCAAGCAGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: KRHVTPTGVKKKELECLCWIGNG*CPSRPS
Trigger: GCTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCA...ACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACGTGCCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 72 bp GCTCCGAGACATCACACACTTGGATATGGCCTGGGCTaGCATAAGTTCCATAAGCACCTGAAGGCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: APRHHTLGYGLG*HKFHKHLKAGA
Trigger: TGCACCAGCCTTCAGGTGCTTATGGAACTTATGTCAGCCCAGGCCATATCCAAGTGTGTGATGTCTCGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 72 bp CCACTTGAAACTGGAGTGAGAAGCTGGTTACTTGCTTaGAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCC +
Preference number: 3 (lower is better)
Translates to: PLETGVRSWLLA*SASEPRFLGWP
Trigger: GGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAAGTAACCAGCTTCTCACTCCAGTTTCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CAA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAACTCACTATATATAGCTaGCATTCAGAGCCACATGGA +
Preference number: 3 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKLTIYS*HSEPHG
Trigger: TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAG...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CAA 90 bp ACAGACAACTCCCTTCAGACAGGGCACAGGCGGGCTAAAAGTCAAAGGATGAAAGAGTTCTGGCAGGGTTaGTTATGTGGCAACAGCAAG +
Preference number: 3 (lower is better)
Translates to: TDNSLQTGHRRAKSQRMKEFWQG*LCGNSK
Trigger: CTTGCTGTTGCCACATAACAAACCCTGCCAGAACTC...TTTCATCCTTTGACTTTTAGCCCGCCTGTGCCCTGTCTGAAGGGAGTTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CAA 90 bp AAGACTGAGGCTGGCAGAGTGGATTACAAACACCCACCACTCCGTGCTGTCCACGTGGTCCTTCTTCAGTaGGTTCAATCCAATGCTTTA +
Preference number: 3 (lower is better)
Translates to: KTEAGRVDYKHPPLRAVHVVLLQ*VQSNAL
Trigger: TAAAGCATTGGATTGAACCAACTGAAGAAGGACCAC...GTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCCTCAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR-3UTR CAA 90 bp CTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGGTCGGTTGCTGTCCCAGCTaGGTCCTGCAAGCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: LECLCYCQNFRAKTITWVGCCPS*VLQAPL
Trigger: CAGAGGGGCTTGCAGGACCAAGCTGGGACAGCAACC...GACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 72 bp CGTAGGCCCAGGCCTCGAGGTTGCCTCCCAGCTTTCTaGGTATTGAGAGTTTGGGTTTCACAGATCAATTAT +
Preference number: 3 (lower is better)
Translates to: RRPRPRGCLPAF*VLRVWVSQINY
Trigger: ATAATTGATCTGTGAAACCCAAACTCTCAATACTCAGAAAGCTGGGAGGCAACCTCGAGGCCTGGGCCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp ACCACTACCCGTCGCCCGGATACACTGAACTGGTTTTaGAGCCTGAACTGCAGAGATCCTAATATAGCAACG +
Preference number: 3 (lower is better)
Translates to: TTTRRPDTLNWF*SLNCRDPNIAT
Trigger: CGTTGCTATATTAGGATCTCTGCAGTTCAGGCTTCAAAACCAGTTCAGTGTATCCGGGCGACGGGTAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR GCA 72 bp CCGAGCAACGTTTCAGTTCTTGATGCAGAAGACTGCTaGTGGCTAGGCAGTAACTACAGTGTATTGACCGGA +
Preference number: 3 (lower is better)
Translates to: PSNVSVLDAEDC*WLGSNYSVLTG
Trigger: TCCGGTCAATACACTGTAGTTACTGCCTAGCCAGCAGCAGTCTTCTGCATCAAGAACTGAAACGTTGCTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR GCA 72 bp CCTCCGAGCAACGTTTCAGTTCTTGATGCAGAAGACTaGTGCTGGCTAGGCAGTAACTACAGTGTATTGACC +
Preference number: 3 (lower is better)
Translates to: PPSNVSVLDAED*CWLGSNYSVLT
Trigger: GGTCAATACACTGTAGTTACTGCCTAGCCAGCAGCAGTCTTCTGCATCAAGAACTGAAACGTTGCTCGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp AGCAACGTTTCAGTTCTTGATGCAGAAGACTGCTGCTaGCTAGGCAGTAACTACAGTGTATTGACCGGAGGG +
Preference number: 3 (lower is better)
Translates to: SNVSVLDAEDCC*LGSNYSVLTGG
Trigger: CCCTCCGGTCAATACACTGTAGTTACTGCCTAGCCAGCAGCAGTCTTCTGCATCAAGAACTGAAACGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp AAGCCACTCTCATCGCTGTATGTGACACAGCACAGTTaGCATGGACCGCCACAGCTTCCTATTATGATAACT +
Preference number: 3 (lower is better)
Translates to: KPLSSLYVTQHS*HGPPQLPIMIT
Trigger: AGTTATCATAATAGGAAGCTGTGGCGGTCCATGCCAACTGTGCTGTGTCACATACAGCGATGAGAGTGGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp ACAGATACACGGTGGTCACTTCCATCCAGGGAGTTCTaGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATA +
Preference number: 3 (lower is better)
Translates to: TDTRWSLPSREF*QGLLCGNSKSI
Trigger: TATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTCCCTGGATGGAAGTGACCACCGTGTATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR TCA 72 bp TTCTTCAGAAGTGCAGCACTTCTGGAAGTGAATCAATaGGGCCCTCGTCTTGGAGGTAAAAGAGCAGGAACT +
Preference number: 3 (lower is better)
Translates to: FFRSAALLEVNQ*GPRLGGKRAGT
Trigger: AGTTCCTGCTCTTTTACCTCCAAGACGAGGGCCTCATTGATTCACTTCCAGAAGTGCTGCACTTCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp CATCCTTGTTCTTCAGAAGTGCAGCACTTCTGGAAGTaGATCAATGAGGCCCTCGTCTTGGAGGTAAAAGAG +
Preference number: 3 (lower is better)
Translates to: HPCSSEVQHFWK*INEALVLEVKE
Trigger: CTCTTTTACCTCCAAGACGAGGGCCTCATTGATTCACTTCCAGAAGTGCTGCACTTCTGAAGAACAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp ACCACACACACACACTGCGCTGCAATGCTCACACCTTaGGGGAAAGGACTTCTCATTATTAAAAACCAAGGA +
Preference number: 3 (lower is better)
Translates to: TTHTHCAAMLTP*GKGLLIIKNQG
Trigger: TCCTTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CCA 72 bp ACTCTCATCGCTGTATGTGACACAGCACAGTTGGCATaGACCGCCACAGCTTCCTATTATGATAACTCTCAT +
Preference number: 3 (lower is better)
Translates to: TLIAVCDTAQLA*TATASYYDNSH
Trigger: ATGAGAGTTATCATAATAGGAAGCTGTGGCGGTCCATGCCAACTGTGCTGTGTCACATACAGCGATGAGAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp CCAGGCCTCGAGGTTGCCTCCCAGCTTTCTGAGTATTaGGAGTTTGGGTTTCACAGATCAATTATTTCTGAT +
Preference number: 3 (lower is better)
Translates to: PGLEVASQLSEY*EFGFHRSIISD
Trigger: ATCAGAAATAATTGATCTGTGAAACCCAAACTCTCAATACTCAGAAAGCTGGGAGGCAACCTCGAGGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp TCAAGACACTCACTCTCAGAGAACGACGACTCCACTTaGAATTCATGTCTGGTGAAACGGGACCAGGTTTTT +
Preference number: 3 (lower is better)
Translates to: SRHSLSENDDST*NSCLVKRDQVF
Trigger: AAAAACCTGGTCCCGTTTCACCAGACATGAATTTCAAGTGGAGTCGTCGTTCTCTGAGAGTGAGTGTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR-3UTR CAA 90 bp AAAGAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTAGACCAGCAGTTGACTaGGATCGGAAACGGCTTGTG +
Preference number: 3 (lower is better)
Translates to: KELECLCYCQNFRAKTITRPAVD*DRKRLV
Trigger: CACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTCT...AGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CCA 72 bp TGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTaGGTCCAGGGTCCTAATGACAGATCAGTCCAACGA +
Preference number: 3 (lower is better)
Translates to: CYCQNFRAKTIT*VQGPNDRSVQR
Trigger: TCGTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR GCA 72 bp ATTACAAAAACTACTACTAGCTCTTGTACTACAGTATaGTTACTCAGTAAAACTAGCGACAGGAGATCCACG +
Preference number: 3 (lower is better)
Translates to: ITKTTTSSCTTV*LLSKTSDRRST
Trigger: CGTGGATCTCCTGTCGCTAGTTTTACTGAGTAAGCATACTGTAGTACAAGAGCTAGTAGTAGTTTTTGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR TCA 72 bp AGAATTTTCTCTGTAGGGTACCTTTTTCATATGTTCTaGTTATTTACAACTGTACAAGCGAAGCACACTCCA +
Preference number: 3 (lower is better)
Translates to: RIFSVGYLFHMF*LFTTVQAKHTP
Trigger: TGGAGTGTGCTTCGCTTGTACAGTTGTAAATAATCAGAACATATGAAAAAGGTACCCTACAGAGAAAATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TGTCCCAGCTTGGTCCTGCAAGCCCCTCTGGGTGGAGCTGCTCACCCCGTGCTCCCCTCTGGGTGGAGCTaGTCACCCCGTGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: CPSLVLQAPLGGAAHPVLPSGWS*SPRAPG
Trigger: CCCCGGAGCACGGGGTGAGCAGCTCCACCCAGAGGG...GAGCACGGGGTGAGCAGCTCCACCCAGAGGGGCTTGCAGGACCAAGCTGGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CATGGCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCTGCGGGCCACGGTCTaGGTGGTGGCCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: HGPGHHHHWHPIPAGHGLLRATV*VVASHL
Trigger: GAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAG...CAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR TCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGCGAGGAGCGACCACATaGCCCCCGCGCTGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVRGATT*PPRCEL
Trigger: CAGCTCACAGCGCGGGGGTCATGTGGTCGCTCCTCG...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCAGCCACCTCCTCCCATaGAGCACTCACACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PSPLASDPCGPRSAWWPASHLLP*STHTVS
Trigger: GCTGACGGTGTGAGTGCTGCATGGGAGGAGGTGGCT...GGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp ATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCACCTCCTCCTGCGGGTCTGGCAATaGGGCATTCTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: IGIRSLRATVCVVASHLLLRVWQ*GILMAL
Trigger: CAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAG...GAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCTCGCCTCGATTGTCTaGAGCCCTGTAGTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSHISTDALARPALPLRGLASIV*SPVVGR
Trigger: GCGGCCCACTACAGGGCTGCAGACAATCGAGGCGAG...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp ATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCACCTCCTCGGTCACCATCACCATTaGCATCCGATCCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: IGIRSLRATVCVVASHLLGHHHH*HPIPAG
Trigger: GCCCGCAGGGATCGGATGCCAATGGTGATGGTGACC...GAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTAAGCAGAGCCCTCCAGTaGCGACTGGCTAATGCACGC +
Preference number: 4 (lower is better)
Translates to: RCELLAASALASIVCSPVSRALQ*RLANAR
Trigger: GCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCT...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTGCCAGTGACAGCCGGTaGTGTGATGACAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TSALMPWRGQHCLYEATPASDSR*CDDRRA
Trigger: GGCCCTCCTGTCATCACATCACCGGCTGTCACTGGC...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TTCTCATGGCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTTGGCATCCGATCCCTaGGGGCCACGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: FSWPWSPSPLASDPCGPRLASDP*GPRSAW
Trigger: CCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAA...CCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCATGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCCCAGGTCCCCTCTCTaGACTAGGAATCGCATGCCG +
Preference number: 4 (lower is better)
Translates to: SSHISTDALARPALPLRGPRSPL*TRNRMP
Trigger: CGGCATGCGATTCCTAGTGCAGAGAGGGGACCTGGG...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GGTCCGACTCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCCACGGTCTGCGTGGTaGCCAGCCACCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GPTPAGLAMRHSHGPGHHPRSAW*PATSSH
Trigger: ATGGGAGGAGGTGGCTGGCCACCACGCAGACCGTGG...ATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCGGGCCACGGTCTGCGTaGTGGCCAGCCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPGPRSA*WPATSS
Trigger: GGAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCC...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGGGATTCGAGACTGCCTaGCTCCACACGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVGFETA*LHTPRP
Trigger: GGGCCTGGGCGTGTGGAGCCAGGCAGTCTCGAATCC...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTACGACGGAGGCTTTGGTaGCGTTGGAGACTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RCELLAASALASIVCSPVRRRLW*RWRLCL
Trigger: CAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCG...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CTCCAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATGCTGCCCCAGGGCCTGGTaGTTGCTGTCCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LQLHQGRAKPLRLAWHICCPRAW*LLSQLG
Trigger: ACCAAGCTGGGACAGCAACCACCAGGCCCTGGGGCA...GCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp CATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCAGGACCATTCATCAGATaGGCGCTGTCCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HHHWHPIPAGHGLRGGQPGPFIR*ALSLPS
Trigger: GGAGGGCAAGGACAGCGCTCATCTGATGAATGGTCC...TGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR TCA 90 bp ATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCACCTCCTCCAGAGAGTCATATTCTaGGGGACCCAGAGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: IGIRSLRATVCVVASHLLQRVIF*GTQSES
Trigger: GCTCTCGCTCTGGGTCCCTCAGAATATGACTCTCTG...GAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR TCA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTGGATCATCGGGTAAATaGGCTGGGGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: TSALMPWRGQHCLYEATPGSSGK*AGEGDR
Trigger: GCGATCCCCCTCCCCAGCTCATTTACCCGATGATCC...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTGGCTAATGCACGCGCTGTACACGCGGTCGCAGTaGGGGCGGAAGGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: IDRRAAEPSSGDWLMHALYTRSQ*GRKEVC
Trigger: ACAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTA...CAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTTGTTTTGGGAATGGCTaGTGGCGCCCTGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSALMPWRGQHCLYEATPCFGNG*WRPGPS
Trigger: GGAAGGGCCAGGGCGCCATCAGCCATTCCCAAAACA...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATATGACCCCCGCGCTGTaGGCTGCTGGCGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADMTPAL*AAGGQR
Trigger: GCGCTGGCCGCCAGCAGCTCACAGCGCGGGGGTCAT...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACTGCGGGCCACGGTCTaGGTGGTGGCCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTLRATV*VVASHL
Trigger: GAGGTGGCTGGCCACCACGCAGACCGTGGCCCGCAG...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GGCAGAGAGTCATATTCTGAGGGACCCAGAGCGAGAGCGTTCATGTCTGCTGGGGGGCCACGGTCTGCGTaGTGGCCAGCCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRESYSEGPRARAFMSAGGPRSA*WPATSS
Trigger: GGAGGAGGTGGCTGGCCACCACGCAGACCGTGGCCC...CCCAGCAGACATGAACGCTCTCGCTCTGGGTCCCTCAGAATATGACTCTCTGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCGCAGGCCTTGTGTTTTaGGAATGGCTGATGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSHISTDALARPALPLRGAGLVF*EWLMAP
Trigger: GGGCGCCATCAGCCATTCCCAAAACACAAGGCCTGC...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTAGTGACACAGCACAGTTaGCATGGACCGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RCELLAASALASIVCSPVVTQHS*HGPPQL
Trigger: AAGCTGTGGCGGTCCATGCCAACTGTGCTGTGTCAC...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CTCCAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATGCACAGTGAGCTTCGGCTaGGAAAAGCGGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LQLHQGRAKPLRLAWHICTVSFG*EKRLLR
Trigger: CCGGAGCAGCCGCTTTTCCCAGCCGAAGCTCACTGT...GCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTAACAACCTTAGCGTCCTaGTCAGAAGTCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RCELLAASALASIVCSPVTTLAS*SEVMGS
Trigger: GGAGCCCATGACTTCTGATCAGGACGCTAAGGTTGT...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTCTCCAGGTGTGGACTTaGGGGCTGGGGGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVLQVWT*GLGAPG
Trigger: ACCGGGAGCCCCCAGCCCTCAAGTCCACACCTGGAG...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGGGCTCGCCCTCGCACTaGGTGGGAGAGTGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLGSPSH*VGECLV
Trigger: AACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCC...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGGAGAGCGTTCATGTCTaGTGGGTCCGACTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVESVHV*WVRLLR
Trigger: CCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTC...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTGGCTAATGCACGCGCTGCGACTCCTGCGGGTCTaGCAATGCGGCATTCTCATG +
Preference number: 4 (lower is better)
Translates to: IDRRAAEPSSGDWLMHALRLLRV*QCGILM
Trigger: CATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCG...CAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTGGCTAATGCACGCGCTGCTTGTGTTTTGGGAATaGCTGATGGCGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IDRRAAEPSSGDWLMHALLVFWE*LMAPWP
Trigger: GGGCCAGGGCGCCATCAGCCATTCCCAAAACACAAG...CAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTAAACCAAGGACTCACTaGCGGACGGGCAGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TSALMPWRGQHCLYEATPKPRTH*RTGRPC
Trigger: ACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGACGAGGTACGTACCGTaGCGGCTCCGTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVTRYVP*RLRSPA
Trigger: TGCAGGTGAACGGAGCCGCCACGGTACGTACCTCGT...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448368.5
CDS-3UTR CCA 90 bp CTGTCTTCTGCATCTGCATCTCCTGGACGCTCACTGATCTGCCCCAGGGCCTGGGCCCTGGCTCTCTTGTaGGACCTGCTGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSASASPGRSLICPRAWALALL*DLLTPA
Trigger: TGCTGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGC...CCAGGCCCTGGGGCAGATCAGTGAGCGTCCAGGAGATGCAGATGCAGAAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 72 bp CGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTaGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLALALSGRVSR*WLTQRSATPPR
Trigger: TCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCTCCTGGCTGTCTGGTTaGGACTCATTTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SSHISTDALARPALPLRGSWLSG*DSFPPV
Trigger: GACAGGAGGAAATGAGTCTCAACCAGACAGCCAGGA...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGGGATCATCGGGTAAATaGGCTGGGGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLGSSGK*AGEGDR
Trigger: GCGATCCCCCTCCCCAGCTCATTTACCCGATGATCC...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp GAGCTTCGGCTGGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATGGATCATCGGGTAAATaGGCTGGGGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: ELRLGKAAAPAEEILVVNGSSGK*AGEGDR
Trigger: GCGATCCCCCTCCCCAGCTCATTTACCCGATGATCC...ATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp ACACCCACCACTCCGTGCTGTCCACAGACAACTCCCTTCAGACAGGGCACAGGCGCGGCTCCGTTCACCTaGACCGATTTACACGCGGTC +
Preference number: 4 (lower is better)
Translates to: TPTTPCCPQTTPFRQGTGAAPFT*TDLHAV
Trigger: GACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGC...GCCTGTGCCCTGTCTGAAGGGAGTTGTCTGTGGACAGCACGGAGTGGTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACTGGCGCGGCCAGCACTaGCTCTACGAGGCCACACCT +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDWRGQH*LYEATP
Trigger: AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCA...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGCCTGATCAGAAGTCATaGGCTCCACTGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ALVTITIGIRSLRATVCVPDQKS*APLGEV
Trigger: CACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGG...CACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCACGGTCTGCGTGGTaGCCAGCCACCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDPRSAW*PATSSH
Trigger: ATGGGAGGAGGTGGCTGGCCACCACGCAGACCGTGG...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGCATTCTCATGGCCCTaGTCACCATCACCATTGGCA +
Preference number: 4 (lower is better)
Translates to: ALVTITIGIRSLRATVCVAFSWP*SPSPLA
Trigger: TGCCAATGGTGATGGTGACCAGGGCCATGAGAATGC...CACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCCCCCAGCTCGAAGCTTaGCGACGGAGGCTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPPQLEA*RRRLWW
Trigger: CCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGG...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGGCACCGAGGGCTCTCTaGAGACCACTACAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLAPRAL*RPLQEG
Trigger: CCCTTCCTGTAGTGGTCTCCAGAGAGCCCTCGGTGC...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGTGGACTTGAGGGCTaGGGGCTCCCGGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLCGLEG*GLPVSL
Trigger: GAGAGATACCGGGAGCCCCCAGCCCTCAAGTCCACA...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTAACGGAGCTGAAGATGTaGACTCTCTCCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: RCELLAASALASIVCSPVTELKM*TLSNQS
Trigger: ACTCTGGTTGGAGAGAGTCCACATCTTCAGCTCCGT...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTAGATGACAGGAGGGCCTaGGTGAAAATGTCAAGACAC +
Preference number: 4 (lower is better)
Translates to: RCELLAASALASIVCSPVDDRRA*VKMSRH
Trigger: GTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACCGCGCTGTGAGCTGCTaGCGGCCAGCGCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDRAVSC*RPAPSP
Trigger: AGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCGCG...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGCAGAGAGTCATATTCTaGGGGACCCAGAGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVQRVIF*GTQSES
Trigger: GCTCTCGCTCTGGGTCCCTCAGAATATGACTCTCTG...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCTACACGCGGTCGCAGTaGGGGCGGAAGGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPYTRSQ*GRKEVC
Trigger: ACAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTA...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTTGCTCTGCTCTCGGCTaGGACGCTTCCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTCSALG*DASPWP
Trigger: CGGCCATGGGGAAGCGTCTCAGCCGAGAGCAGAGCA...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp TCCAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATGCTAGTTCCATAAGCACCTaGAGGCTGGTGCACGAGGGT +
Preference number: 4 (lower is better)
Translates to: SSSTRAGLSLSGWPGIYASSIST*RLVHEG
Trigger: ACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACT...AGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp ATTTGGCTGTCTTCTGCATCTGCATCTCCTGGACGCTCACTGATCTGCCCCAGGCCGTTAGGACAGGGGTaGGGAACAGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: IWLSSASASPGRSLICPRPLGQG*GTGCGC
Trigger: GCAGCCGCAGCCTGTTCCTCACCCCTGTCCTAACGG...CCTGGGGCAGATCAGTGAGCGTCCAGGAGATGCAGATGCAGAAGACAGCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCCCCTCCTGGACTCTCTaGGTCTGCGGTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPPSWTL*VCGSAT
Trigger: TGTGGCTGAACCGCAGACGCAGAGAGTCCAGGAGGG...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGCCCTCCTGGACTCTCTaGGTCTGCGGTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SCGSGNAAFSWPWSPSPLPSWTL*VCGSAT
Trigger: TGTGGCTGAACCGCAGACGCAGAGAGTCCAGGAGGG...CAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp TCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGGATGAGCGCTGTCCTTaGCCTCCTGGACTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SCGSGNAAFSWPWSPSPLDERCP*PPGLSA
Trigger: CGCAGAGAGTCCAGGAGGGCAAGGACAGCGCTCATC...CAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp TCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGGCATCCGATGCTGGGTCCGACTCCTaGGGGTCTGGCAATGCGGCA +
Preference number: 4 (lower is better)
Translates to: SGNAAFSWPWSPSPLASDAGSDS*GSGNAA
Trigger: TGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGC...ATCGGATGCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp TATTCTGAGGGACCCAGAGCGAGAGCGTTCATGTCTGCTGGGTCCGACTCCTGCGAGAGCGTTCATGTCTaGTGGGTCCGACTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: YSEGPRARAFMSAGSDSCESVHV*WVRLLR
Trigger: CCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTC...GCAGGAGTCGGACCCAGCAGACATGAACGCTCTCGCTCTGGGTCCCTCAGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGAAGGGTGTTCACGCTTaGGTCTGCACTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVKGVHA*VCTEGP
Trigger: AGGACCCTCAGTGCAGACGCAAGCGTGAACACCCTT...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGCTCCCGGTATCTCTCTaGGGGCTCTGCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLLPVSL*GLCQLL
Trigger: AAGAAGCTGGCAGAGCCCGCAGAGAGATACCGGGAG...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCGATGCAGAAGACTGCTaGTGGCTAGGCAGTAACTAC +
Preference number: 4 (lower is better)
Translates to: SSHISTDALARPALPLRGDAEDC*WLGSNY
Trigger: GTAGTTACTGCCTAGCCAGCAGCAGTCTTCTGCATC...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GCCATGAGGAGACCGAGCCCTGGCTCTCTTGTGGGACCTGCTGACCCCAGCAGAGCTGTCTTCTGCATCTaGATCTCCTGGACGCTCACT +
Preference number: 4 (lower is better)
Translates to: AMRRPSPGSLVGPADPSRAVFCI*ISWTLT
Trigger: AGTGAGCGTCCAGGAGATGCAGATGCAGAAGACAGC...TCTGCTGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGCTCGGTCTCCTCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCAGTCATGGGCTCCACTaGGAGAAGTGTAATGCTAAC +
Preference number: 4 (lower is better)
Translates to: PSPLASDPCGPRSAWWPASHGLH*EKCNAN
Trigger: GTTAGCATTACACTTCTCCCAGTGGAGCCCATGACT...GGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp TCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGAGCGTTCATGTCTGCTaGGTCCGACTCCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SCGSGNAAFSWPWSPSPLSVHVC*VRLLRV
Trigger: GACCCGCAGGAGTCGGACCCAGCAGACATGAACGCT...CAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCGTCTTCCTGGCTGTCTaGTTGAGACTCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSHISTDALARPALPLRGVFLAV*LRLISS
Trigger: GGAGGAAATGAGTCTCAACCAGACAGCCAGGAAGAC...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGCGACGGAGGCTTTGGTaGCGTTGGAGACTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLRRRLW*RWRLCL
Trigger: CAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCG...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGCGACGGAGGCTTTaGTGGCGTTGGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLWRRRL*WRWRLC
Trigger: ACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCA...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTCCCCAGCTCGAAGCTTaGCGACGGAGGCTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVPQLEA*RRRLWW
Trigger: CCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGG...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGGTAATGGAGGGAAGCTaGACAGCCCCAGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLVMEGS*TAPARS
Trigger: GCTTCGAGCTGGGGCTGTCCAGCTTCCCTCCATTAC...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGCGCCCTCGCACTGAGTaGGAGAGTGTCTCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLRPRTE*ESVSFV
Trigger: CACAAACGAGACACTCTCCCACTCAGTGCGAGGGCG...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp GAGCTTCGGCTGGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATTCGCTCGTACGTTGCTaGTACAGCACAAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ELRLGKAAAPAEEILVVNSLVRC*YSTRSR
Trigger: CCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGA...ATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACCTCCAGGTGTGGACTTaGGGGCTGGGGGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDLQVWT*GLGAPG
Trigger: ACCGGGAGCCCCCAGCCCTCAAGTCCACACCTGGAG...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTTCTCATCGCTGTATGTaGCACAGCACAGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: TSALMPWRGQHCLYEATPSHRCM*HSTVGM
Trigger: CATGCCAACTGTGCTGTGTCACATACAGCGATGAGA...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGATGAGCGCTGTCCTTaGCCTCCTGGACTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVDERCP*PPGLSA
Trigger: CGCAGAGAGTCCAGGAGGGCAAGGACAGCGCTCATC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTAAGGGTGTTCACGCTTaGGTCTGCACTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSKGVHA*VCTEGP
Trigger: AGGACCCTCAGTGCAGACGCAAGCGTGAACACCCTT...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGCGGCTCCGTTCACCTaGACCGATTTACACGCGGTC +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVAAPFT*TDLHAV
Trigger: GACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCTCTGCGGGCTCTaGCAGCTTCTTTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVSLCGL*QLLFLL
Trigger: AAGGAGGAAAAGAAGCTGGCAGAGCCCGCAGAGAGA...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACACACGGACAGAAATGTaGACAGAGCAGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDTRTEM*TEQGRG
Trigger: GCCCCGGCCCTGCTCTGTGCACATTTCTGTCCGTGT...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCTGTCCTTGCCCTCCTaGACTCTCTGCGTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDLSLPS*TLCVCG
Trigger: ACCGCAGACGCAGAGAGTCCAGGAGGGCAAGGACAG...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp TGGCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGGACTCAAAGGTGGGATaGAACTTGTCTGAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: WPWSPSPLASDPCGPRSADSKVG*NLSEKW
Trigger: CCACTTCTCAGACAAGTTCCATCCCACCTTTGAGTC...CGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGGTCACCATCACCATTaGCATCCGATCCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVGHHHH*HPIPAG
Trigger: GCCCGCAGGGATCGGATGCCAATGGTGATGGTGACC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp TCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGCGACTCCTGCGGGTCTaGCAATGCGGCATTCTCATG +
Preference number: 4 (lower is better)
Translates to: SCGSGNAAFSWPWSPSPLRLLRV*QCGILM
Trigger: CATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCG...CAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCGCTTTCGCAATTCCGTaGCGGCTCCGTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPAFAIP*RLRSPA
Trigger: TGCAGGTGAACGGAGCCGCCACGGAATTGCGAAAGC...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACTGTGGACTTGAGGGCTaGGGGCTCCCGGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDCGLEG*GLPVSL
Trigger: GAGAGATACCGGGAGCCCCCAGCCCTCAAGTCCACA...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTTTCACTGAGGAGACTTaGGGGGAGTGCTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSFTEET*GECSAL
Trigger: GAGAGCAGAGCACTCCCCCCAAGTCTCCTCAGTGAA...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTTCACTGAGGAGACTTaGGGGGAGTGCTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLFTEET*GECSAL
Trigger: GAGAGCAGAGCACTCCCCCCAAGTCTCCTCAGTGAA...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCCGCCCTCGCACTGAGTaGGAGAGTGTCTCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPRPRTE*ESVSFV
Trigger: CACAAACGAGACACTCTCCCACTCAGTGCGAGGGCG...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CGCTGTGAGCTGCTGGCGGCCAGCGCCCTCGCCTCGATTGTCTGCAGCCCTGTAAGGCATGTTTTCCTCTaGCAGGGTCAATCATGCTTA +
Preference number: 4 (lower is better)
Translates to: RCELLAASALASIVCSPVRHVFL*QGQSCL
Trigger: TAAGCATGATTGACCCTGCCAGAGGAAAACATGCCT...TACAGGGCTGCAGACAATCGAGGCGAGGGCGCTGGCCGCCAGCAGCTCACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGGACCATTCATCAGATaGGCGCTGTCCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVGPFIR*ALSLPS
Trigger: GGAGGGCAAGGACAGCGCTCATCTGATGAATGGTCC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp GGCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTATTAGGGTTCAGCTCTaGAACCTTAGTTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GPGHHHHWHPIPAGHGLRIRVQL*NLSCWY
Trigger: GTACCAGCAACTAAGGTTTCAGAGCTGAACCCTAAT...ACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR TCA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTACCACGTCTGGGGAGTaGTCAGGCTGTACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTTTSGE*SGCTGG
Trigger: TCCCCCTGTACAGCCTGATCACTCCCCAGACGTGGT...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTGAGGAGGATACTGTCTaGGAGAAGTCAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSEEDTV*EKSEET
Trigger: CGTCTCCTCTGACTTCTCTCAGACAGTATCCTCCTC...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CATGTCTGCTGGGTCCGACTCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCTCTGACACCGGTAGCTaGGGAGTGTTTTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: HVCWVRLLRVWQCGILMASDTGS*GVFSDS
Trigger: TGAGTCAGAAAACACTCCTCAGCTACCGGTGTCAGA...GGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR TCA 90 bp CAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATGCTCCAATCCTGGTCGTGAATaGAAATGCATCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QLHQGRAKPLRLAWHICSNPGRE*KCISVG
Trigger: GCCCACAGAGATGCATTTTCATTCACGACCAGGATT...GGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CCCCTGCAGGTTCACTCCGCCCAGGAGATCAAAAAGGATGCGCTCTCTACATTCAGCCACCTCCTCCCATaGAGCACTCACACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLQVHSAQEIKKDALSTFSHLLP*STHTVS
Trigger: GCTGACGGTGTGAGTGCTGCATGGGAGGAGGTGGCT...GAATGTAGAGAGCGCATCCTTTTTGATCTCCTGGGCGGAGTGAACCTGCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAACTGCGGGTCTGGCAATaGGGCATTCTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKLRVWQ*GILMAL
Trigger: CAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAG...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGCCTCTGTCTTCAAATTaGCGGCAGCTCCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVPLSSN*RQLQVM
Trigger: CATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGG...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp CGACTCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCTGTCCGTCTCTATCATaGCATCCCCAAACAACACCG +
Preference number: 4 (lower is better)
Translates to: RLLRVWQCGILMALVTITCPSLS*HPQTTP
Trigger: CGGTGTTGTTTGGGGATGGCATGATAGAGACGGACA...GGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR GCA 90 bp GAGCTTCGGCTGGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATACCCCAGCAGAGCCCTaGAGACAATCCACAGATACA +
Preference number: 4 (lower is better)
Translates to: ELRLGKAAAPAEEILVVNTPAEP*RQSTDT
Trigger: TGTATCTGTGGATTGTCTGCAGGGCTCTGCTGGGGT...ATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CTTCAGACTTTGGTGGGTGGAGGCGGAATACGTAAACCTCTGACAGCCATGAGGGTCCCAGCTTGGTCCTaGAAGCCCCTCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LQTLVGGGGIRKPLTAMRVPAWS*KPLWVE
Trigger: CTCCACCCAGAGGGGCTTGCAGGACCAAGCTGGGAC...CCTCATGGCTGTCAGAGGTTTACGTATTCCGCCTCCACCCACCAAAGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAAAGCGTTCATGTCTGCTaGGTCCGACTCCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKSVHVC*VRLLRV
Trigger: GACCCGCAGGAGTCGGACCCAGCAGACATGAACGCT...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCGTTGCTGACCACGTCTaGGGAGTGATCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPVADHV*GVIRLY
Trigger: GTACAGCCTGATCACTCCCCAGACGTGGTCAGCAAC...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACAGTAATGGAGGGAAGCTaGACAGCCCCAGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTVMEGS*TAPARS
Trigger: GCTTCGAGCTGGGGCTGTCCAGCTTCCCTCCATTAC...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGGTTTCTCCGCCACCTTaGGATCATCGGGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVVSPPP*DHRVNE
Trigger: CTCATTTACCCGATGATCCCAAGGTGGCGGAGAAAC...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTCAGAACCAAGGTTTCTaGGGTGGCCCCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVQNQGF*GGPCRF
Trigger: GAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTG...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GTTGACTTGGATCGGAAACGGCTTGTGCCCAAGCAGGCCCAGCAACACACGTGGTGTGCCCTTCCTTCCTaGCCTATGGTCTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VDLDRKRLVPKQAQQHTWCALPS*PMVSPA
Trigger: AGCAGGTGAGACCATAGGCCAGGAAGGAAGGGCACA...CCACGTGTGTTGCTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CTCACATCCTATGTAGTAAACACAGTGAGCTTCGGCTGGGAAAAGCGGCTGCTCGCAAGCCCCTCTGGGTaGAGCTGCTCACCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LTSYVVNTVSFGWEKRLLASPSG*SCSPRA
Trigger: AGCACGGGGTGAGCAGCTCCACCCAGAGGGGCTTGC...GAGCAGCCGCTTTTCCCAGCCGAAGCTCACTGTGTTTACTACATAGGATGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 72 bp GAAGACTGCTGCTGGCTAGGCAGTAACTACAGTGTATaGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACT +
Preference number: 4 (lower is better)
Translates to: EDCCWLGSNYSV*TGGQQSPPVAT
Trigger: AGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAATACACTGTAGTTACTGCCTAGCCAGCAGCAGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CAA 72 bp CCCACACACCTTCGTCTAAGCAGACCAGCAGTTGACTaGGATCGGAAACGGCTTGTGCCCAAGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PTHLRLSRPAVD*DRKRLVPKQAQ
Trigger: CTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTCTGCTTAGACGAAGGTGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTGGCTAATGCACGCGCTGATTAGGGTTCAGCTCTaGAACCTTAGTTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: IDRRAAEPSSGDWLMHALIRVQL*NLSCWY
Trigger: GTACCAGCAACTAAGGTTTCAGAGCTGAACCCTAAT...CAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTTCTCTTGGCATATGCTaGAGGGTTTTGAATCCGTGT +
Preference number: 4 (lower is better)
Translates to: TSALMPWRGQHCLYEATPSLGIC*RVLNPC
Trigger: ACACGGATTCAAAACCCTTCAGCATATGCCAAGAGA...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTGCCTCCCAGCTTTCTaGGTATTGAGAGTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVCLPAF*VLRVWV
Trigger: AACCCAAACTCTCAATACTCAGAAAGCTGGGAGGCA...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGCTTCGGTCGACAAAGTaGAGGACTAAGCTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLLRSTK*RTKLAL
Trigger: TAGAGCCAGCTTAGTCCTTCACTTTGTCGACCGAAG...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAATACAGGGGGAACTGCTaGTGGGGGCTGTACATGGGA +
Preference number: 4 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKYRGNC*WGLYMG
Trigger: TCCCATGTACAGCCCCCAGCAGCAGTTCCCCCTGTA...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTGTTCACGCTTGCGTCTaGACTGAGGGTCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSVHACV*TEGPFF
Trigger: AAAGAAAGGACCCTCAGTGCAGACGCAAGCGTGAAC...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp ATTTGGCTGTCTTCTGCATCTGCATCTCCTGGACGCTCACTGATCTGCCCCAGGATCGGAAACGGCTTGTaGCCAAGCAGGCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: IWLSSASASPGRSLICPRIGNGL*PSRPSN
Trigger: GTTGCTGGGCCTGCTTGGGCACAAGCCGTTTCCGAT...CCTGGGGCAGATCAGTGAGCGTCCAGGAGATGCAGATGCAGAAGACAGCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGCTGAGCTTCTTGATGTaGTCGAGGTTAGCCACCGTT +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLLSFLM*SRLATV
Trigger: AACGGTGGCTAACCTCGACCACATCAAGAAGCTCAG...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGAGTCTGTCCACACTGTaGGTTTCCCTCTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLSLSTL*VSLCFS
Trigger: GGAGAAACAGAGGGAAACCCACAGTGTGGACAGACT...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCCTCCAACCAGAGTGCTaGGGAACACGGACAGAAATG +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPLQPEC*GTRTEM
Trigger: CATTTCTGTCCGTGTTCCCCAGCACTCTGGTTGGAG...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGGCAATGCTCACACCTTaGGGGAAAGGACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVAMLTP*GKGLLI
Trigger: AATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGC...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GCCATGAGGAGACCGAGCCCTGGCTCTCTTGTGGGACCTGCTGACCCCAGCAGAGCAGGGTTTGTTATGTaGCAACAGCAAGTCAATACC +
Preference number: 4 (lower is better)
Translates to: AMRRPSPGSLVGPADPSRAGFVM*QQQVNT
Trigger: GGTATTGACTTGCTGTTGCCACATAACAAACCCTGC...TCTGCTGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGCTCGGTCTCCTCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 72 bp CTGGCTAATGCACGCGCTGCCCTCCTCATGCAGCTGTaGAGCTCCCACTTCGGTCGACAAAGTGAAGGACTA +
Preference number: 4 (lower is better)
Translates to: LANARAALLMQL*SSHFGRQSEGL
Trigger: TAGTCCTTCACTTTGTCGACCGAAGTGGGAGCTCAACAGCTGCATGAGGAGGGCAGCGCGTGCATTAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CCCCTGCAGGTTCACTCCGCCCAGGAGATCAAAAAGGATGCGCTCTCTACATTCATAGCTGTGCGTTGCTaGCCACGTCTGGGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: PLQVHSAQEIKKDALSTFIAVRC*PRLGSD
Trigger: ATCACTCCCCAGACGTGGTCAGCAACGCACAGCTAT...GAATGTAGAGAGCGCATCCTTTTTGATCTCCTGGGCGGAGTGAACCTGCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGATCCGTGTTCTAGTTTaGCCTGCTTGCCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVIRVLV*PACLVC
Trigger: ACAAACAAGGCAAGCAGGTCAAACTAGAACACGGAT...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTTCGCTCGTACGTTGCTaGTACAGCACAAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTSLVRC*YSTRSR
Trigger: CCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGA...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATCACCATTGGCCTGAGGAGTGTTTTCTaGCTCAAAGGTGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: LRVWQCGILMALVTITIGLRSVF*LKGGME
Trigger: TTCCATCCCACCTTTGAGTCAGAAAACACTCCTCAG...GCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR TCA 90 bp GAGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTCTCTTCACAACCTCCTaGCCCCACCGGGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EFWQGLLCGNSKSIPHPSLFTTS*PHRAAL
Trigger: CAGGGCCGCCCGGTGGGGTCAGGAGGTTGTGAAGAG...ACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCCCTCTGTCTTCAAATTaGCGGCAGCTCCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPPLSSN*RQLQVM
Trigger: CATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGG...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp GAGCTTCGGCTGGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATTCTCTGACAAATCTCTaGGTAGCTGGGCTTTCGCAA +
Preference number: 4 (lower is better)
Translates to: ELRLGKAAAPAEEILVVNSLTNL*VAGLSQ
Trigger: TTGCGAAAGCCCAGCTACGCAGAGATTTGTCAGAGA...ATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTAGCTGGTTACTTGCTTaGAGTGCATCAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSSWLLA*SASEPR
Trigger: CCTTGGTTCTGATGCACTGCAAGCAAGTAACCAGCT...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACTCTCTCCAACCAGAGTaGTGGGGAACACGGACAGAA +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDSLQPE*WGTRTE
Trigger: TTCTGTCCGTGTTCCCCAGCACTCTGGTTGGAGAGA...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATCACACTGCGCTGCAATaGTCACACCTTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADHTALQ*SHLGGK
Trigger: CTTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTG...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CTCACATCCTATGTAGTAAACACAGTGAGCTTCGGCTGGGAAAAGCGGCTGCTCGCTGGGAAAAGCGGCTaGTCCGGCCGAGGAAATCCT +
Preference number: 4 (lower is better)
Translates to: LTSYVVNTVSFGWEKRLLAGKSG*SGRGNP
Trigger: AGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGC...GAGCAGCCGCTTTTCCCAGCCGAAGCTCACTGTGTTTACTACATAGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTAGTCATGGGCTCCACTaGGAGAAGTGTAATGCTAAC +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSSHGLH*EKCNAN
Trigger: GTTAGCATTACACTTCTCCCAGTGGAGCCCATGACT...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTACCTGACTCAAAGGTaGGATGGAACTTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVYLTQR*DGTCLR
Trigger: TCTCAGACAAGTTCCATCCCACCTTTGAGTCAGGTA...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTGCTTGCCTTGTTTGTaGACTCCGGACACCATTAAT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVCLPCL*TPDTIN
Trigger: ATTAATGGTGTCCGGAGTCCACAAACAAGGCAAGCA...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CATAAGTTCCATAAGCACCTGAAGGCTGGTGCACGAGGGTCTCTGGCTAAGCCAGCTTTCGCAATTCCGTaGCGGCTCCGTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: HKFHKHLKAGARGSLAKPAFAIP*RLRSPA
Trigger: TGCAGGTGAACGGAGCCGCCACGGAATTGCGAAAGC...TGGCTTAGCCAGAGACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACTTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CATGGCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGTTTCTGACTCAAAGGTaGGATGGAACTTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: HGPGHHHHWHPIPAGHGLFLTQR*DGTCLR
Trigger: TCTCAGACAAGTTCCATCCCACCTTTGAGTCAGAAA...CAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CCA 90 bp TCACCTGCTGTCCCTCCTCTCCGTGGTGGAGACACCCACACACCTTCGTCTAAGGAGACATCACACACTTaGATATGGCCTGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SPAVPPLRGGDTHTPSSKETSHT*IWPGLT
Trigger: TGTCAGCCCAGGCCATATCCAAGTGTGTGATGTCTC...CTTAGACGAAGGTGTGTGGGTGTCTCCACCACGGAGAGGAGGGACAGCAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp GGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTCTTCCCTCCTGCAAGCCCCTCTaGGTGGAGCTGCTCACCCCG +
Preference number: 4 (lower is better)
Translates to: GRVCYVATASQYLILVLPSCKPL*VELLTP
Trigger: CGGGGTGAGCAGCTCCACCCAGAGGGGCTTGCAGGA...GGGAAGAACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTCTCTTGGCATATGCTaGAGGGTTTTGAATCCGTGT +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLSLGIC*RVLNPC
Trigger: ACACGGATTCAAAACCCTTCAGCATATGCCAAGAGA...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp AGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTCTCCAGGTGTGGACTTaGGGGCTGGGGGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SSGRVCYVATASQYLILVLQVWT*GLGAPG
Trigger: ACCGGGAGCCCCCAGCCCTCAAGTCCACACCTGGAG...AACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACAAGAAGAAAACCAACTTaGGGATCCCACAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTRRKPT*GSHRPQ
Trigger: CTGAGGCCTGTGGGATCCTCAAGTTGGTTTTCTTCT...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAACTCCCACATCAGCACTaGTGCCCTGGCGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQLPHQH*CPGAAS
Trigger: GCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAG...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTACATAATAGCCACTTaGAACTGGAGTGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVYIIAT*NWSEKL
Trigger: CAGCTTCTCACTCCAGTTTCAAGTGGCTATTATGTA...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CCCCTGCAGGTTCACTCCGCCCAGGAGATCAAAAAGGATGCGCTCTCTACATTCCTGGAAGTGAATCAATaGGGCCCTCGTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLQVHSAQEIKKDALSTFLEVNQ*GPRLGG
Trigger: ACCTCCAAGACGAGGGCCTCATTGATTCACTTCCAG...GAATGTAGAGAGCGCATCCTTTTTGATCTCCTGGGCGGAGTGAACCTGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGAACGACGACTCCACTTaGAATTCATGTCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVNDDST*NSCLVK
Trigger: TTTCACCAGACATGAATTTCAAGTGGAGTCGTCGTT...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp AAGACTGAGGCTGGCAGAGTGGATTACAAACACCCACCACTCCGTGCTGTCCACAAGCAGACCAGCAGTTaGCTTGGATCGGAAACGGCT +
Preference number: 4 (lower is better)
Translates to: KTEAGRVDYKHPPLRAVHKQTSS*LGSETA
Trigger: AGCCGTTTCCGATCCAAGTCAACTGCTGGTCTGCTT...GTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCCTCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTTGGCAGGGTCAATCATaGTTAGCTGCAGGTGATTTA +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSWQGQS*LAAGDL
Trigger: TAAATCACCTGCAGCTAAGCATGATTGACCCTGCCA...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTCTTGATGCAGAAGACTaGTGCTGGCTAGGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVLDAED*CWLGSN
Trigger: GTTACTGCCTAGCCAGCAGCAGTCTTCTGCATCAAG...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATGCTCCGTTGGTTCAATCCAATaGTTTAGAGAAACACGGGAT +
Preference number: 4 (lower is better)
Translates to: QLHQGRAKPLRLAWHICSVGSIQ*FRETRD
Trigger: ATCCCGTGTTTCTCTAAAGCATTGGATTGAACCAAC...GGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CTGCAGACAATCCACAGATACACGGTGGTCACTTCCATCCAGGGAGTTCTGGCATGCACGCTTAGGCTGTaGCCTTCCTTCCTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: LQTIHRYTVVTSIQGVLACTLRL*PSFLAY
Trigger: ATAGGCCAGGAAGGAAGGGCACAGCCTAAGCGTGCA...TGCCAGAACTCCCTGGATGGAAGTGACCACCGTGTATCTGTGGATTGTCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATCCTGATCAGAAGTCATaGGCTCCACTGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADPDQKS*APLGEV
Trigger: CACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGG...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTGCATTCTCATGGCCCTaGTCACCATCACCATTGGCA +
Preference number: 4 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTAFSWP*SPSPLA
Trigger: TGCCAATGGTGATGGTGACCAGGGCCATGAGAATGC...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACGCTGGGGGCTGTACATaGGAGGGAAGTAGAACGACG +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDAGGCT*EGSRTT
Trigger: CGTCGTTCTACTTCCCTCCCATGTACAGCCCCCAGC...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTTGCTTGCCTTGTTTGTaGACTCCGGACACCATTAAT +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSCLPCL*TPDTIN
Trigger: ATTAATGGTGTCCGGAGTCCACAAACAAGGCAAGCA...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACAGCCCAGCCTCTCTCTTaGCATATGCTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTAQPLS*HMLKGF
Trigger: AAAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGC...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGCCCAGCCTCTCTCTTaGCATATGCTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVAQPLS*HMLKGF
Trigger: AAAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTGGTCCTTTCTTTGGATaGTCCTATTATCAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: TSALMPWRGQHCLYEATPGPFFG*SYYQAR
Trigger: TCTAGCTTGATAATAGGACCATCCAAAGAAAGGACC...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACAGTTTCTCCGCCACCTTaGGATCATCGGGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTVSPPP*DHRVNE
Trigger: CTCATTTACCCGATGATCCCAAGGTGGCGGAGAAAC...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CTAAGCAGACCAGCAGTTGACTTGGATCGGAAACGGCTTGTGCCCAAGCAGGCCAGTCTGTCCACACTGTaGGTTTCCCTCTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSRPAVDLDRKRLVPKQASLSTL*VSLCFS
Trigger: GGAGAAACAGAGGGAAACCCACAGTGTGGACAGACT...GGCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTCTGCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTTTTTTGGGGTTGCAATaGGGAAGAAGGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSFLGLQ*GRRRLF
Trigger: AAAGAGCCTCCTTCTTCCCCATTGCAACCCCAAAAA...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAATACCAACGGCTTAGGTaGAAGCACAGCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKYQRLR*KHSSHI
Trigger: GATGTGGGAGCTGTGCTTCCACCTAAGCCGTTGGTA...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGCAGAAGACTGCTGCTaGCTAGGCAGTAACTACAGT +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVAEDCC*LGSNYS
Trigger: ACTGTAGTTACTGCCTAGCCAGCAGCAGTCTTCTGC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CCCCTGCAGGTTCACTCCGCCCAGGAGATCAAAAAGGATGCGCTCTCTACATTCACAGCACAGTTGGCATaGACCGCCACAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PLQVHSAQEIKKDALSTFTAQLA*TATASY
Trigger: ATAGGAAGCTGTGGCGGTCCATGCCAACTGTGCTGT...GAATGTAGAGAGCGCATCCTTTTTGATCTCCTGGGCGGAGTGAACCTGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGAAATCTCTGCGTAGCTaGGCTTTCGCAATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVKSLRS*AFAIPN
Trigger: ATTTGGAATTGCGAAAGCCCAGCTACGCAGAGATTT...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448368.5
CDS-3UTR CCA 90 bp GCTTGTGCCCAAGCAGGCCCAGCAACACACGTGGTCCTTCTTCAGTTGGTTCAATCCACAGATACACGGTaGTCACTTCCATCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ACAQAGPATHVVLLQLVQSTDTR*SLPSRE
Trigger: CTCCCTGGATGGAAGTGACCACCGTGTATCTGTGGA...TTGAACCAACTGAAGAAGGACCACGTGTGTTGCTGGGCCTGCTTGGGCACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp ACAGACAACTCCCTTCAGACAGGGCACAGGCGGGCTAAAAGTCAAAGGATGAAAATCTGCCCCAGGGCCTaGTGGTTGCTGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TDNSLQTGHRRAKSQRMKICPRA*WLLSQL
Trigger: AAGCTGGGACAGCAACCACCAGGCCCTGGGGCAGAT...TTTCATCCTTTGACTTTTAGCCCGCCTGTGCCCTGTCTGAAGGGAGTTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp GTCTCGCTATTTTCAGGCAGAGAGTCATATTCTGAGGGACCCAGAGCGAGAGCGACAACCTTAGCGTCCTaGTCAGAAGTCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VSLFSGRESYSEGPRARATTLAS*SEVMGS
Trigger: GGAGCCCATGACTTCTGATCAGGACGCTAAGGTTGT...CGCTCTCGCTCTGGGTCCCTCAGAATATGACTCTCTGCCTGAAAATAGCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR TCA 90 bp ATTGACCGGAGGGCAGCAGAGCCCTCCAGTGGCGACTGGCTAATGCACGCGCTGGTCACTATCCATCTGTaGTATAAGATACATGTCACT +
Preference number: 4 (lower is better)
Translates to: IDRRAAEPSSGDWLMHALVTIHL*YKIHVT
Trigger: AGTGACATGTATCTTATATCACAGATGGATAGTGAC...CAGCGCGTGCATTAGCCAGTCGCCACTGGAGGGCTCTGCTGCCCTCCGGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAACGTTTCAGTTCTTaGTGCAGAAGACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTQRFSS*CRRLLL
Trigger: CAGCAGCAGTCTTCTGCATCAAGAACTGAAACGTTG...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGGACGTTCTAGAGATATaGACTTACAGACCAGTTACT +
Preference number: 4 (lower is better)
Translates to: QTLQAPNQRLALALSGRVDVLEI*TYRPVT
Trigger: AGTAACTGGTCTGTAAGTGCATATCTCTAGAACGTC...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCTCTTGTACTACAGTATaGTTACTCAGTAAAACTAGC +
Preference number: 4 (lower is better)
Translates to: SSHISTDALARPALPLRGSCTTV*LLSKTS
Trigger: GCTAGTTTTACTGAGTAAGCATACTGTAGTACAAGA...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp ACAGACAACTCCCTTCAGACAGGGCACAGGCGGGCTAAAAGTCAAAGGATGAAACTCTGGCTAAGCCACTaGACGCTTAGGCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: TDNSLQTGHRRAKSQRMKLWLSH*TLRLCP
Trigger: AGGGCACAGCCTAAGCGTGCAGTGGCTTAGCCAGAG...TTTCATCCTTTGACTTTTAGCCCGCCTGTGCCCTGTCTGAAGGGAGTTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp GAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGGAGCTGCTCACCCCGTaGTCCGGGGCTCACGCCTGC +
Preference number: 4 (lower is better)
Translates to: ELECLCYCQNFRAKTITWELLTP*SGAHAC
Trigger: GCAGGCGTGAGCCCCGGAGCACGGGGTGAGCAGCTC...CCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp GAGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTGGACGCTCACTGATCTaGCCCAGGGCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: EFWQGLLCGNSKSIPHPSGRSLI*PRAWWL
Trigger: CAACCACCAGGCCCTGGGGCAGATCAGTGAGCGTCC...ACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGACTCAAAGGTGGGATaGAACTTGTCTGAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVDSKVG*NLSEKW
Trigger: CCACTTCTCAGACAAGTTCCATCCCACCTTTGAGTC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAGGATTCGAGACTGCCTaGCTCCACACGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQGFETA*LHTPRP
Trigger: GGGCCTGGGCGTGTGGAGCCAGGCAGTCTCGAATCC...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACAGGCTTTGGTGGCGTTaGAGACTGTGTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDRLWWR*RLCLAA
Trigger: AGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCT...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CTGCAGACAATCCACAGATACACGGTGGTCACTTCCATCCAGGGAGTTCTGGCACCATCCAGGGAGTTCTaGCAGGGTTTGTTATGTGGC +
Preference number: 4 (lower is better)
Translates to: LQTIHRYTVVTSIQGVLAPSREF*QGLLCG
Trigger: GCCACATAACAAACCCTGCCAGAACTCCCTGGATGG...TGCCAGAACTCCCTGGATGGAAGTGACCACCGTGTATCTGTGGATTGTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp GAGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTGAGGAGACCGAGCCCTaGCTCTCTTGTGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: EFWQGLLCGNSKSIPHPSEETEP*LSCGTC
Trigger: GCAGGTCCCACAAGAGAGCCAGGGCTCGGTCTCCTC...ACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp GTTGACTTGGATCGGAAACGGCTTGTGCCCAAGCAGGCCCAGCAACACACGTGGGCAAAGACAATTACTTaGGTCCAGGGTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: VDLDRKRLVPKQAQQHTWAKTIT*VQGPND
Trigger: GTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGC...CCACGTGTGTTGCTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCAAGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATTTAGTTGCTGGTACCTaGCTCAAAGGTGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADLVAGT*LKGGME
Trigger: TTCCATCCCACCTTTGAGTCAGGTACCAGCAACTAA...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp TCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCAGTCCAACTACACGCGGTCGCAGTaGGGGCGGAAGGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SEQRQLLGSRVLMTDQSNYTRSQ*GRKEVC
Trigger: ACAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTA...GTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAGGCTCGCCCTCGCACTaGGTGGGAGAGTGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQGSPSH*VGECLV
Trigger: AACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCC...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCACGCAATATTACTATaGAGCGATTTTGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSHAILL*SDFDLA
Trigger: GGCCAAATCAAAATCGCTGCATAGTAATATTGCGTG...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAATCTCTGACAAATCTCTaGGTAGCTGGGCTTTCGCAA +
Preference number: 4 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKSLTNL*VAGLSQ
Trigger: TTGCGAAAGCCCAGCTACGCAGAGATTTGTCAGAGA...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACTCTCTCTGCGGGCTCTaGCAGCTTCTTTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDSLCGL*QLLFLL
Trigger: AAGGAGGAAAAGAAGCTGGCAGAGCCCGCAGAGAGA...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTTCACTATATATAGCTTaGATTCAGAGCCACATGGAG +
Preference number: 4 (lower is better)
Translates to: TLQAPNQRLALALSGRVSSLYIA*IQSHME
Trigger: CTCCATGTGGCTCTGAATGCAAGCTATATATAGTGA...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACTCTACATTCTTAAATaGCACAGTCCCCTACCAACG +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTLYILK*HSPLPT
Trigger: CGTTGGTAGGGGACTGTGGCATTTAAGAATGTAGAG...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GGAGAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACGAGCAGGTGCAGGAGTaGGCAGCGTCTGTTCACACC +
Preference number: 4 (lower is better)
Translates to: GETGAGVLLLLKKPLLTNEQVQE*AASVHT
Trigger: GGTGTGAACAGACGCTGCGCACTCCTGCACCTGCTC...GTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp TCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCAGTCCAACGCCTATGGTCTCACCTaGTGTCCCTCCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SEQRQLLGSRVLMTDQSNAYGLT*CPSSPW
Trigger: CCACGGAGAGGAGGGACAGCAGGTGAGACCATAGGC...GTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp AGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTCCAGGGCCTGGTGGTTaGTGTCCCAGCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSGRVCYVATASQYLILVPGPGG*CPSLVL
Trigger: CAGGACCAAGCTGGGACAGCAACCACCAGGCCCTGG...AACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAACGCAGGCTTGAACGCTaGAGACGTAAACCCATTTAT +
Preference number: 4 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKRRLER*RRKPIY
Trigger: ATAAATGGGTTTACGTCTCCAGCGTTCAAGCCTGCG...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CATAAGTTCCATAAGCACCTGAAGGCTGGTGCACGAGGGTCTCTGGCTAAGCCAGTTTCTCCGCCACCTTaGGATCATCGGGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: HKFHKHLKAGARGSLAKPVSPPP*DHRVNE
Trigger: CTCATTTACCCGATGATCCCAAGGTGGCGGAGAAAC...TGGCTTAGCCAGAGACCCTCGTGCACCAGCCTTCAGGTGCTTATGGAACTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CTTCAGACTTTGGTGGGTGGAGGCGGAATACGTAAACCTCTGACAGCCATGAGGAAATCTCTGCGTAGCTaGGCTTTCGCAATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LQTLVGGGGIRKPLTAMRKSLRS*AFAIPW
Trigger: CCACGGAATTGCGAAAGCCCAGCTACGCAGAGATTT...CCTCATGGCTGTCAGAGGTTTACGTATTCCGCCTCCACCCACCAAAGTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGACAACCAACAGTGTTTaGCTTTTGTTCTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QAPNQRLALALSGRVSRLTTNSV*LLFFLG
Trigger: CCCCAAAAAGAACAAAAGCCAAACACTGTTGGTTGT...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp GAGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTGTGGACTTGAGGGCTaGGGGCTCCCGGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: EFWQGLLCGNSKSIPHPSCGLEG*GLPVSL
Trigger: GAGAGATACCGGGAGCCCCCAGCCCTCAAGTCCACA...ACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp GGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTCTTCCCCCTCTCCGGCTGGCCTaGCATATATGCTCCGAGACA +
Preference number: 4 (lower is better)
Translates to: GRVCYVATASQYLILVLPPLRLA*HICSET
Trigger: TGTCTCGGAGCATATATGCCAGGCCAGCCGGAGAGG...GGGAAGAACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp GGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTCTTCCCCTAAGCCTCTCCGGCTaGCCTGGCATATATGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRVCYVATASQYLILVLPLSLSG*PGIYAP
Trigger: CGGAGCATATATGCCAGGCCAGCCGGAGAGGCTTAG...GGGAAGAACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp ACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAGGATCATCGGGTAAATaGGCTGGGGAGGGGGATCGC +
Preference number: 4 (lower is better)
Translates to: TGAGVLLLLKKPLLTNTEGSSGK*AGEGDR
Trigger: GCGATCCCCCTCCCCAGCTCATTTACCCGATGATCC...TTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR TCA 90 bp TGGAGAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAATACACGCGGTCGCAGTaGGGGCGGAAGGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: WRNRSWGLVTTQETSIDQYTRSQ*GRKEVC
Trigger: ACAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTA...TTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR TCA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTCACTTGAAACTGGAGTaGGAAGCTGGTTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTHLKLE*EAGYLL
Trigger: AAGCAAGTAACCAGCTTCTCACTCCAGTTTCAAGTG...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAGCGGCTCCGTTCACCTaGACCGATTTACACGCGGTC +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQAAPFT*TDLHAV
Trigger: GACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGC...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAGCACACAGACAGGCATaGACCACCACTACCCGTCGC +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQAHRQA*TTTTRR
Trigger: GCGACGGGTAGTGGTGGTGCATGCCTGTCTGTGTGC...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAAAAGCCTCGCGGCTGTCGTaGAGGAAGGCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: AGVLLLLKKPLLTNTEIKASRLS*RKAGTR
Trigger: CCTCGTGCCTGCCTTCCTGCACGACAGCCGCGAGGC...TTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp CTTCAGACTTTGGTGGGTGGAGGCGGAATACGTAAACCTCTGACAGCCATGAGGAATTTGGCTGTCTTCTaGATCTGCATCTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: LQTLVGGGGIRKPLTAMRNLAVF*ICISWT
Trigger: CGTCCAGGAGATGCAGATGCAGAAGACAGCCAAATT...CCTCATGGCTGTCAGAGGTTTACGTATTCCGCCTCCACCCACCAAAGTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp ACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAGCACCGAGGGCTCTCTaGAGACCACTACAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TGAGVLLLLKKPLLTNTEAPRAL*RPLQEG
Trigger: CCCTTCCTGTAGTGGTCTCCAGAGAGCCCTCGGTGC...TTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACAAATCTCTGCGTAGCTaGGCTTTCGCAATTCCGTGG +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDKSLRS*AFAIPW
Trigger: CCACGGAATTGCGAAAGCCCAGCTACGCAGAGATTT...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CCCCTGCAGGTTCACTCCGCCCAGGAGATCAAAAAGGATGCGCTCTCTACATTCTTTTTGGGGTTGCAATaGGGAAGAAGGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLQVHSAQEIKKDALSTFFLGLQ*GRRRLF
Trigger: AAAGAGCCTCCTTCTTCCCCATTGCAACCCCAAAAA...GAATGTAGAGAGCGCATCCTTTTTGATCTCCTGGGCGGAGTGAACCTGCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACAGAGTGTCTCGTTTGTaGTTAACACAGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDRVSRL*LTQRSA
Trigger: CGCAGAGCGCTGTGTTAACCACAAACGAGACACTCT...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAATGGCTGATGGCGCCCTaGCCCTTCCGTAGCGAAGAT +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQWLMAP*PFRSED
Trigger: ATCTTCGCTACGGAAGGGCCAGGGCGCCATCAGCCA...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp AAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATGAAAATGCATCTCTGAACAACTTCAGACTTTaGTGGGTGGAGGCGGAATAC +
Preference number: 4 (lower is better)
Translates to: KAAAPAEEILVVNENASLNNFRL*WVEAEY
Trigger: GTATTCCGCCTCCACCCACCAAAGTCTGAAGTTGTT...CAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp AAACGGCACGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTGAAAATGCATCTCTGTaGGCCCTCACAGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: KRHVTPTGVKKKELECLCENASL*ALTGPR
Trigger: GCGTGGGCCTGTGAGGGCCCACAGAGATGCATTTTC...ACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACGTGCCGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 72 bp CGGTGGTCACTTCCATCCAGGGAGTTCTGGCAGGGTTaGTTATGTGGCAACAGCAAGTCAATACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RWSLPSREFWQG*LCGNSKSIPHP
Trigger: AGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTCCCTGGATGGAAGTGACCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 72 bp GCTGGCCTGGCATATATGCTCCGAGACATCACACACTaGGATATGGCCTGGGCTGACATAAGTTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: AGLAYMLRDITH*DMAWADISSIS
Trigger: GCTTATGGAACTTATGTCAGCCCAGGCCATATCCAAGTGTGTGATGTCTCGGAGCATATATGCCAGGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACCTTAAATCCATGTGCTaGTGCAGAGGTACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDLKSMC*CRGTGR
Trigger: TCTCCCTGTACCTCTGCATCAGCACATGGATTTAAG...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATGAAATTCATGTCTGGTaGAACGGGACCAGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADEIHVW*NGTRFL
Trigger: TAAAAACCTGGTCCCGTTTCACCAGACATGAATTTC...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAGCGGCTCCGTTCACCTaGACCGATTTACACGCGGTC +
Preference number: 4 (lower is better)
Translates to: GAGVLLLLKKPLLTNTEIAAPFT*TDLHAV
Trigger: GACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGC...TATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAACAGGCCTCAGACACTaGAAGCTCCTAACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQTGLRH*KLLTSG
Trigger: GCCGCTGGTTAGGAGCTTGCAGTGTCTGAGGCCTGT...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTTCACTATATATAGCTTaGATTCAGAGCCACATGGAG +
Preference number: 4 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVSLYIA*IQSHME
Trigger: CTCCATGTGGCTCTGAATGCAAGCTATATATAGTGA...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACGAGAAGCTGGTTACTTaGTTGCAGTGCATCAGAACC +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDEKLVT*LQCIRT
Trigger: GGTTCTGATGCACTGCAAGCAAGTAACCAGCTTCTC...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CCCCTGCAGGTTCACTCCGCCCAGGAGATCAAAAAGGATGCGCTCTCTACATTCGTGATTGGCACATACTaGTCACTATCCATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PLQVHSAQEIKKDALSTFVIGTY*SLSICD
Trigger: ATCACAGATGGATAGTGACCAGTATGTGCCAATCAC...GAATGTAGAGAGCGCATCCTTTTTGATCTCCTGGGCGGAGTGAACCTGCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGTAATGGAGGGAAGCTaGACAGCCCCAGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: ETGAGVLLLLKKPLLTNTVMEGS*TAPARS
Trigger: GCTTCGAGCTGGGGCTGTCCAGCTTCCCTCCATTAC...AGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CCA 90 bp AAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATGAAAATGCATCTCTGTTTTTGGGGTTGCAATaGGGAAGAAGGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: KAAAPAEEILVVNENASLFLGLQ*GRRRLF
Trigger: AAAGAGCCTCCTTCTTCCCCATTGCAACCCCAAAAA...CAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACACAACCAACAGTGTTTaGCTTTTGTTCTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDTTNSV*LLFFLG
Trigger: CCCCAAAAAGAACAAAAGCCAAACACTGTTGGTTGT...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp ACTTCCATCCAGGGAGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATGCCCAGCAACACACGTaGTCCTTCTTCAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: TSIQGVLAGFVMWQQQVNAQQHT*SFFSWF
Trigger: GAACCAACTGAAGAAGGACCACGTGTGTTGCTGGGC...ATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTCCCTGGATGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp GGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTCTTCCCGACCAGCAGTTGACTTaGATCGGAAACGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GRVCYVATASQYLILVLPDQQLT*IGNGLC
Trigger: GCACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTC...GGGAAGAACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTTACTGTCAGTGCACGAGGGTCTCTaGCTAAGCCACTGCACGCTT +
Preference number: 4 (lower is better)
Translates to: RYTDRSEKERAGMPLLLSVHEGL*LSHCTL
Trigger: AAGCGTGCAGTGGCTTAGCCAGAGACCCTCGTGCAC...TGACAGTAACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACACTATGCAGCGATTTTaGTTTGGCCTTACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDTMQRF*FGLTFS
Trigger: AGAAAAAGTAAGGCCAAATCAAAATCGCTGCATAGT...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTATGCTCTGCTCTCGGCTaGGACGCTTCCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLCSALG*DASPWP
Trigger: CGGCCATGGGGAAGCGTCTCAGCCGAGAGCAGAGCA...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp AAAGAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGCTCTGCTCTCGGCTaGGACGCTTCCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: KELECLCYCQNFRAKTITCSALG*DASPWP
Trigger: CGGCCATGGGGAAGCGTCTCAGCCGAGAGCAGAGCA...AGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACAACTCTCATTTTCTTCTaGGCAGAAACTCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: NQRLALALSGRVSRLWLTTLIFF*AETLEV
Trigger: TACTTCAAGAGTTTCTGCTCAGAAGAAAATGAGAGT...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp AAAGAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTCTCCTGGACGCTCACTaGTCTGCCCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KELECLCYCQNFRAKTITLLDAH*SAPGPG
Trigger: ACCAGGCCCTGGGGCAGATCAGTGAGCGTCCAGGAG...AGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp TCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCAGTCCAACAGGCCCACGCAGAGGTaGATGAATTTGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SEQRQLLGSRVLMTDQSNRPTQR*MNLAVF
Trigger: GAAGACAGCCAAATTCATTCACCTCTGCGTGGGCCT...GTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp AAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATGAAAATGCATCTCTGAGGAAATCCTGGTCGTaGATGAAAATGCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: KAAAPAEEILVVNENASLRKSWS*MKMHLC
Trigger: ACAGAGATGCATTTTCATTCACGACCAGGATTTCCT...CAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTATTGGCATCCGATCCCTaGGGGCCACGGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLLASDP*GPRSAW
Trigger: CCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAA...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCGCTGGGTCCGACTCCTaGGGGTCTGGCAATGCGGCA +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGAGSDS*GSGNAA
Trigger: TGCCGCATTGCCAGACCCGCAGGAGTCGGACCCAGC...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp AGAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACAAGGGTGTTCACGCTTaGGTCTGCACTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RNRSWGLVTTQETSIDQHKGVHA*VCTEGP
Trigger: AGGACCCTCAGTGCAGACGCAAGCGTGAACACCCTT...GTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp GTCAAAACTTCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCTCCCGGTATCTCTCTaGGGGCTCTGCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VKTSEQRQLLGSRVLMTDLPVSL*GLCQLL
Trigger: AAGAAGCTGGCAGAGCCCGCAGAGAGATACCGGGAG...ATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGCCTCGCGGCTGTCGTaGAGGAAGGCAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGASRLS*RKAGTR
Trigger: CCTCGTGCCTGCCTTCCTGCACGACAGCCGCGAGGC...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448368.5
CDS-3UTR CCA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTTTTCATCCACTTaGACTAAAGGTAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: PRTEWESVSFVVNTALCDPFSST*TKGKDL
Trigger: AAGATCTTTACCTTTAGTCCAAGTGGATGAAAAGGG...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTTACTGTCATTCACTGAGGAGACTTaGGGGGAGTGCTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RYTDRSEKERAGMPLLLSFTEET*GECSAL
Trigger: GAGAGCAGAGCACTCCCCCCAAGTCTCCTCAGTGAA...TGACAGTAACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCCCCTCCAGTGGCGACTaGCTAATGCACGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGPSSGD*LMHALP
Trigger: GGGCAGCGCGTGCATTAGCCAGTCGCCACTGGAGGG...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGGTTGCTGTCCCAGCTTaGTCCTGCAAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ELECLCYCQNFRAKTITWVAVPA*SCKPLW
Trigger: CCAGAGGGGCTTGCAGGACCAAGCTGGGACAGCAAC...CCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 72 bp AAAGCCACTCTCATCGCTGTATGTGACACAGCACAGTaGGCATGGACCGCCACAGCTTCCTATTATGATAAC +
Preference number: 4 (lower is better)
Translates to: KATLIAVCDTAQ*AWTATASYYDN
Trigger: GTTATCATAATAGGAAGCTGTGGCGGTCCATGCCAACTGTGCTGTGTCACATACAGCGATGAGAGTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CAA 72 bp CAAGCAGGCCCAGCAACACACGTGGTCCTTCTTCAGTaGGTTCAATCCAATGCTTTAGAGAAACACGGGATT +
Preference number: 4 (lower is better)
Translates to: QAGPATHVVLLQ*VQSNALEKHGI
Trigger: AATCCCGTGTTTCTCTAAAGCATTGGATTGAACCAACTGAAGAAGGACCACGTGTGTTGCTGGGCCTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp GGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATATCGCTCGTACGTTGCTaGTACAGCACAAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GAGVLLLLKKPLLTNTEISLVRC*YSTRSR
Trigger: CCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGA...TATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR TCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAACAGGAGGGCCTGGGTaGAAATGTCAAGACACTCAC +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQTGGPG*KCQDTH
Trigger: GTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGT...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GGAGAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACCCTCTGTCTTCAAATTaGCGGCAGCTCCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: GETGAGVLLLLKKPLLTNPLSSN*RQLQVM
Trigger: CATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGG...GTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp AGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTTCTCTCTGCGGGCTCTaGCAGCTTCTTTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSGRVCYVATASQYLILVSLCGL*QLLFLL
Trigger: AAGGAGGAAAAGAAGCTGGCAGAGCCCGCAGAGAGA...AACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGATCAGCACTGATGCCCTaGCGCGGCCAGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGSALMP*RGQHCL
Trigger: GAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGA...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAAAAGGAACGAGGTACGTACCGTaGCGGCTCCGTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GVLLLLKKPLLTNTEIKGTRYVP*RLRSPA
Trigger: TGCAGGTGAACGGAGCCGCCACGGTACGTACCTCGT...TCCTTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CCA 90 bp GTCAAAACTTCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATTTCCTTCCTGGCCTATaGTCTCACCTGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: VKTSEQRQLLGSRVLMTDFLPGL*SHLLSL
Trigger: GAGGGACAGCAGGTGAGACCATAGGCCAGGAAGGAA...ATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp ACAGACAACTCCCTTCAGACAGGGCACAGGCGGGCTAAAAGTCAAAGGATGAAACTAAAAGTCAAAGGATaGAAAACGGCACGTTACACC +
Preference number: 4 (lower is better)
Translates to: TDNSLQTGHRRAKSQRMKLKVKG*KTARYT
Trigger: GGTGTAACGTGCCGTTTTTCATCCTTTGACTTTTAG...TTTCATCCTTTGACTTTTAGCCCGCCTGTGCCCTGTCTGAAGGGAGTTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAACACCGTCAGCAGCACTaGTTGCTTCCAGATGTAACA +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQHRQQH*LLPDVT
Trigger: TGTTACATCTGGAAGCAAGCAGTGCTGCTGACGGTG...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTTATAGCTATTGCCTTTaGTTTTATCCGTGCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTYSYCL*FYPCLN
Trigger: ATTAAGGCACGGATAAAAGCAAAGGCAATAGCTATA...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCGAGAGGATTCGAGACTaGCTGGCTCCACACGCCCAG +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGERIRD*LAPHAQ
Trigger: CTGGGCGTGTGGAGCCAGGCAGTCTCGAATCCTCTC...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAGAGAGGATTCGAGACTaGCTGGCTCCACACGCCCAG +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLERIRD*LAPHAQ
Trigger: CTGGGCGTGTGGAGCCAGGCAGTCTCGAATCCTCTC...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp ACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAGTTCACGCTTGCGTCTaGACTGAGGGTCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TGAGVLLLLKKPLLTNTEVHACV*TEGPFF
Trigger: AAAGAAAGGACCCTCAGTGCAGACGCAAGCGTGAAC...TTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAATGGCCCTCATTCATCTaGGGGGACGTTCTAGAGATA +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQWPSFI*GDVLEI
Trigger: TATCTCTAGAACGTCCCCGCAGATGAATGAGGGCCA...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAAGGGGGAACTGCTGCTaGGGGCTGTACATGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGRGNCC*GLYMGG
Trigger: CCCTCCCATGTACAGCCCCCAGCAGCAGTTCCCCCT...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCGCACCGAGGGCTCTCTaGAGACCACTACAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGAPRAL*RPLQEG
Trigger: CCCTTCCTGTAGTGGTCTCCAGAGAGCCCTCGGTGC...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp ACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAGTTTCTCCGCCACCTTaGGATCATCGGGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: TGAGVLLLLKKPLLTNTEVSPPP*DHRVNE
Trigger: CTCATTTACCCGATGATCCCAAGGTGGCGGAGAAAC...TTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CCA 90 bp GAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTAGTCTGTCCACACTGTaGGTTTCCCTCTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETGAGVLLLLKKPLLTNTSLSTL*VSLCFS
Trigger: GGAGAAACAGAGGGAAACCCACAGTGTGGACAGACT...AGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
3UTR CAA 72 bp GTCAAGACACTCACTCTCAGAGAACGACGACTCCACTaGAAATTCATGTCTGGTGAAACGGGACCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VKTLTLRERRLH*KFMSGETGPGF
Trigger: AAAACCTGGTCCCGTTTCACCAGACATGAATTTCAAGTGGAGTCGTCGTTCTCTGAGAGTGAGTGTCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACGAAGCACACTCCAAGTaGACGTATTTAATACAGTAT +
Preference number: 4 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDEAHSK*TYLIQY
Trigger: ATACTGTATTAAATACGTGCACTTGGAGTGTGCTTC...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGAGCAGGTGCAGGAGTaGGCAGCGTCTGTTCACACC +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGEQVQE*AASVHT
Trigger: GGTGTGAACAGACGCTGCGCACTCCTGCACCTGCTC...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448368.5
CDS-3UTR GCA 90 bp GTCAAAACTTCAGAGCAAAGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCTGGCCTGGCATATATaGTCCGAGACATCACACACT +
Preference number: 4 (lower is better)
Translates to: VKTSEQRQLLGSRVLMTDLAWHI*SETSHT
Trigger: AGTGTGTGATGTCTCGGAGCATATATGCCAGGCCAG...ATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCTCGCTCGTACGTTGCTaGTACAGCACAAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGSLVRC*YSTRSR
Trigger: CCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGA...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGACTGTACAGGGGGAACTaGTGCTGGGGGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGLYRGN*CWGLYM
Trigger: CATGTACAGCCCCCAGCAGCAGTTCCCCCTGTACAG...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp ACACGTGGTCCTTCTTCAGTTGGTTCAATCCAATGCTTTAGAGAAACACGGGATCACTTGGATATGGCCTaGGCTGACATAAGTTCCATA +
Preference number: 4 (lower is better)
Translates to: TRGPSSVGSIQCFRETRDHLDMA*ADISSI
Trigger: TATGGAACTTATGTCAGCCCAGGCCATATCCAAGTG...ATCCCGTGTTTCTCTAAAGCATTGGATTGAACCAACTGAAGAAGGACCACGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
3UTR CAA 72 bp GATATAGCAAGGAATGGAATACAACAACTTCAGACTTaGGTGGGTGGAGGCGGAATACGTAAACCTCTGACA +
Preference number: 4 (lower is better)
Translates to: DIARNGIQQLQT*VGGGGIRKPLT
Trigger: TGTCAGAGGTTTACGTATTCCGCCTCCACCCACCAAAGTCTGAAGTTGTTGTATTCCATTCCTTGCTATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAATGTCCACACGGAGCTaGAGATGTGGACTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLMSTRS*RCGLSP
Trigger: TGGAGAGAGTCCACATCTTCAGCTCCGTGTGGACAT...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAACTGGTTTTGAAGCCTaGACTGCAGAGATCCTAATA +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQTGFEA*TAEILI
Trigger: TATTAGGATCTCTGCAGTTCAGGCTTCAAAACCAGT...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAAGTTACTTGCTTGCAGTaGATCAGAACCAAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQVTCLQ*IRTKVS
Trigger: AGAAACCTTGGTTCTGATGCACTGCAAGCAAGTAAC...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAAGGCTTTGGTGGCGTTaGAGACTGTGTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGRLWWR*RLCLAA
Trigger: AGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCT...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
3UTR CAA 72 bp GATCCTAAAGTCTATGGAGAAACAGGAGCTGGGGTCTaGTTACTACTCAAGAAACCTCTATTGACCAACACT +
Preference number: 4 (lower is better)
Translates to: DPKVYGETGAGV*LLLKKPLLTNT
Trigger: AGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCCATAGACTTTAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR TCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAGATCCACGCAGTAACTaGGTAACTCTGACCCACTCA +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLDPRSN*VTLTHS
Trigger: TGAGTGGGTCAGAGTTACTCAGTTACTGCGTGGATC...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR TCA 90 bp GGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAGACTACATGGTGGTCTaGGAAAGAACTAGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: GAGVLLLLKKPLLTNTEIDYMVV*ERTRVV
Trigger: AACTACTCTAGTTCTTTCTCAGACCACCATGTAGTC...TATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCGTTCACGCTTGCGTCTaGACTGAGGGTCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGVHACV*TEGPFF
Trigger: AAAGAAAGGACCCTCAGTGCAGACGCAAGCGTGAAC...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR GCA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAACTTCACTTACGATCCTaGCAGTTTTTGCTCTCTATA +
Preference number: 4 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQLHLRS*QFLLSI
Trigger: TATAGAGAGCAAAAACTGGCAGGATCGTAAGTGAAG...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGGTCCTTTCTTTGGATaGTCCTATTATCAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ETGAGVLLLLKKPLLTNTGPFFG*SYYQAR
Trigger: TCTAGCTTGATAATAGGACCATCCAAAGAAAGGACC...AGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAAGTCTGTCCACACTGTaGGTTTCCCTCTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLSLSTL*VSLCFS
Trigger: GGAGAAACAGAGGGAAACCCACAGTGTGGACAGACT...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CGTTACACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTTGTTACTGTCAACAACCAACAGTGTTTaGCTTTTGTTCTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RYTDRSEKERAGMPLLLSTTNSV*LLFFLG
Trigger: CCCCAAAAAGAACAAAAGCCAAACACTGTTGGTTGT...TGACAGTAACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGTGTAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCAGAGTGTCTCGTTTGTaGTTAACACAGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGRVSRL*LTQRSA
Trigger: CGCAGAGCGCTGTGTTAACCACAAACGAGACACTCT...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp GAAAGAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACAACTTCAGACTTTGGTaGGTGGAGGCGGAATACGTA +
Preference number: 4 (lower is better)
Translates to: ERAGMPLLLSKLQSKDNYNFRLW*VEAEYV
Trigger: TACGTATTCCGCCTCCACCCACCAAAGTCTGAAGTT...GTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CCA 90 bp AGACAATTACTTGGGTCCAGGGTCCTAATGACAGATCAGTCCAACGAGAAGACAGGATATAGCAAGGAATaGAATACAACAACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: RQLLGSRVLMTDQSNEKTGYSKE*NTTTSD
Trigger: GTCTGAAGTTGTTGTATTCCATTCCTTGCTATATCC...TGTCTTCTCGTTGGACTGATCTGTCATTAGGACCCTGGACCCAAGTAATTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAAGAAGAAAACCAACTTaGGGATCCCACAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGRRKPT*GSHRPQ
Trigger: CTGAGGCCTGTGGGATCCTCAAGTTGGTTTTCTTCT...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR TCA 90 bp ACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAATCTATTGACCAACACTaGAATAAAAGGACTACATGG +
Preference number: 4 (lower is better)
Translates to: TGAGVLLLLKKPLLTNTESIDQH*NKRTTW
Trigger: CCATGTAGTCCTTTTATTTCAGTGTTGGTCAATAGA...TTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTATCTCTGACAAATCTCTaGGTAGCTGGGCTTTCGCAA +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLSLTNL*VAGLSQ
Trigger: TTGCGAAAGCCCAGCTACGCAGAGATTTGTCAGAGA...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAACTGGAGTGAGAAGCTaGTTACTTGCTTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLTGVRS*LLACSA
Trigger: TGCACTGCAAGCAAGTAACCAGCTTCTCACTCCAGT...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAAAAGGATGGAGAAACAGGAGCTaGGGTCTTGTTACTACTCAA +
Preference number: 4 (lower is better)
Translates to: GVLLLLKKPLLTNTEIKGWRNRS*GLVTTQ
Trigger: TTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCCA...TCCTTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR TCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCATCCGTGTTCTAGTTTaGCCTGCTTGCCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGIRVLV*PACLVC
Trigger: ACAAACAAGGCAAGCAGGTCAAACTAGAACACGGAT...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAAGCCACCGTTGTGATTaGCACATACTGGTCACTATC +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGSHRCD*HILVTI
Trigger: GATAGTGACCAGTATGTGCCAATCACAACGGTGGCT...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
3UTR CAA 72 bp ACCGACAGGAGTGAAAAAGAAAGAGCTGGAATGCCTTaGTTACTGTCAAAACTTCAGAGCAAAGACAATTAC +
Preference number: 4 (lower is better)
Translates to: TDRSEKERAGMP*LLSKLQSKDNY
Trigger: GTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTCTTTCTTTTTCACTCCTGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR TCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAACACTGAACTGGTTTTaGAGCCTGAACTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGTLNWF*SLNCRD
Trigger: ATCTCTGCAGTTCAGGCTTCAAAACCAGTTCAGTGT...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAAAAGGAAAAAGGACTACATGGTaGTCTGAGAAAGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: GVLLLLKKPLLTNTEIKGKRTTW*SEKELE
Trigger: CTCTAGTTCTTTCTCAGACCACCATGTAGTCCTTTT...TCCTTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAGGTCCTTTCTTTGGATaGTCCTATTATCAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLGPFFG*SYYQAR
Trigger: TCTAGCTTGATAATAGGACCATCCAAAGAAAGGACC...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CCA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCCTGGTAACATGTCAGTaGGCAACAAAGTGTATGTTT +
Preference number: 4 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGLVTCQ*ATKCMF
Trigger: AAACATACACTTTGTTGCCCACTGACATGTTACCAG...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR GCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTACTTTGCTTTTATCCGTaGCTTAATTGGTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLLCFYP*LNWFSL
Trigger: CAAGGAAAACCAATTAAGGCACGGATAAAAGCAAAG...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp GCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAAAAAATAAAAGGACTACATaGTGGTCTGAGAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: AGVLLLLKKPLLTNTEIKNKRTT*WSEKEL
Trigger: TAGTTCTTTCTCAGACCACCATGTAGTCCTTTTATT...TTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR GCA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGATGTGTTTATAGCTATTaGCTTTGCTTTTATCCGTGC +
Preference number: 4 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGCVYSY*LCFYPC
Trigger: GCACGGATAAAAGCAAAGGCAATAGCTATAAACACA...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CCA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTATATAAATCCAGTATTTaGAAATGGAGTTACCAAGGG +
Preference number: 4 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLYKSSI*KWSYQG
Trigger: CCCTTGGTAACTCCATTTCCAAATACTGGATTTATA...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CCA 90 bp CCGGGCCGGGCCGGGCCGGAGGTAGGGGAGAGGGCGGGCGCGAGCTaGCGGCGGCGGCGGCGGCGGATTCTTCCCCTTTCGGGCCCGAAA +
Preference number: 5 (lower is better)
Translates to: PGRAGPEVGERAGAS*RRRRRRILPLSGPK
Trigger: TTTCGGGCCCGAAAGGGGAAGAATCCGCCGCCGCCGCCGCCGCCAGCTCGCGCCCGCCCTCTCCCCTACCTCCGGCCCGGCCCGGCCCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS GCA 90 bp GAAGTCATGGGCTCCACTGGGAGAAGTGTAATGCTAACCTCAGGATaGTGTCAGCGCCGCCGCCCCGCCCGACCGGCCGCCCGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: EVMGSTGRSVMLTSG*CQRRRPARPAARGL
Trigger: GAGCCCGCGGGCGGCCGGTCGGGCGGGGCGGCGGCGCTGACAGCATCCTGAGGTTAGCATTACACTTCTCCCAGTGGAGCCCATGACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000476529.5
ENST00000481118.1
CDS GCA 90 bp CAGGAGTGCGCAGCGTCTGTTCACACCAGAGCCTCGCGGCTGTCGTaGAGGAAGGCAGGCACGAGGTACGTACCGTGGCGGCTCCGTTCA +
Preference number: 5 (lower is better)
Translates to: QECAASVHTRASRLS*RKAGTRYVPWRLRS
Trigger: TGAACGGAGCCGCCACGGTACGTACCTCGTGCCTGCCTTCCTGCACGACAGCCGCGAGGCTCTGGTGTGAACAGACGCTGCGCACTCCTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
CDS-3UTR CAA 90 bp CCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTGGTGGCCAGCCTGGTCACCATCACCATaGGCATCCGATCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: PSPLASDPCGPRSAWWPAWSPSP*ASDPCG
Trigger: CCCGCAGGGATCGGATGCCAATGGTGATGGTGACCA...GGCTGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CAA 90 bp TCCAGCTCCACCAGGGCAGGGCTAAGCCTCTCCGGCTGGCCTGGCATATATGCTCGAGCCCTGGCTCTCTaGTGGGACCTGCTGACCCCA +
Preference number: 5 (lower is better)
Translates to: SSSTRAGLSLSGWPGIYARALAL*WDLLTP
Trigger: TGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGCTCG...AGCATATATGCCAGGCCAGCCGGAGAGGCTTAGCCCTGCCCTGGTGGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS GCA 90 bp CAGGAAGGCAGGCACGAGGTACGTACCGTGGCGGCTCCGTTCACCTaGACCGATTTACACGCGGTCGCAGTGAGGGCGGAAGGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: QEGRHEVRTVAAPFT*TDLHAVAVRAEGSL
Trigger: CAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGCCACGGTACGTACCTCGTGCCTGCCTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
CDS TCA 90 bp CCGGCACTAAGCGGAGCTGGTACCAGTGCCCGTTCACCCCACCCGTaGACAGCCTTGGGAGAGCAGCACAAGGACATAGGGGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: PALSGAGTSARSPHP*TALGEQHKDIGEEG
Trigger: ACCCTCTTCCCCTATGTCCTTGTGCTGCTCTCCCAAGGCTGTTCACGGGTGGGGTGAACGGGCACTGGTACCAGCTCCGCTTAGTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS CCA 90 bp GGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTGGTGGCGTTaGAGACTGTGTCTGGCTGCTCTGCAACAGAATGACACCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GQPQLEAWRRRLWWR*RLCLAALQQNDTPG
Trigger: CCCTGGGGTGTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 90 bp CCGTGGCGGCTCCGTTCACCTGCACCGATTTACACGCGGTCGCAGTaGGGGCGGAAGGAAGTCTGTCCACACTGTGGGTTTCCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: PWRLRSPAPIYTRSQ*GRKEVCPHCGFPSV
Trigger: AACAGAGGGAAACCCACAGTGTGGACAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
ENST00000609318.5
ENST00000614908.4
CDS TCA 90 bp GTAATGCTAACCTCAGGATGCTTGCCGCCCAGTAACACCCACATGTaGCCACTCCCTGCTTCCACACGACTCTGTCAGCGCCGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: VMLTSGCLPPSNTHM*PLPASTRLCQRRRP
Trigger: GGGGCGGCGGCGCTGACAGAGTCGTGTGGAAGCAGGGAGTGGTCACATGTGGGTGTTACTGGGCGGCAAGCATCCTGAGGTTAGCATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406525.6
CDS TCA 90 bp GCTATCCACCCATGGCTGCCAGCACTCACGAACAGCAGGGGCAGCTaGAGGCAAGGGAGACACTCTGGAGTGACTCCAGCCCACCAGATG +
Preference number: 5 (lower is better)
Translates to: AIHPWLPALTNSRGS*RQGRHSGVTPAHQM
Trigger: CATCTGGTGGGCTGGAGTCACTCCAGAGTGTCTCCCTTGCCTTCAGCTGCCCCTGCTGTTCGTGAGTGCTGGCAGCCATGGGTGGATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp CCTCTGTCTTCAAATTGCCGGCAGCTCCAGGTAATGGAGGGAAGCTaGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: PLSSNCRQLQVMEGS*TAPARSLATEALVA
Trigger: CGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTCCCTCCATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000448368.5
ENST00000609318.5
CDS-3UTR CAA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGCAAGATAGCTGTGCGTaGCTGACCACGTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: QTLQAPNQRLALALSGRVQDSCA*LTTSGE
Trigger: CTCCCCAGACGTGGTCAGCAACGCACAGCTATCTTG...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTTGGCGACGGAGGCTTaGGTGGCGTTGGAGACTGTG +
Preference number: 5 (lower is better)
Translates to: QAPNQRLALALSGRVSRLLATEA*VALETV
Trigger: CACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAA...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACGCCCCAGCTCGAAGCTaGGCGACGGAGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: PRTEWESVSFVVNTALCDAPARS*ATEALV
Trigger: CACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGC...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCGGGAGAGTGTCTCGTTaGTGGTTAACACAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: SSHISTDALARPALPLRGGRVSR*WLTQRS
Trigger: AGAGCGCTGTGTTAACCACAAACGAGACACTCTCCC...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS GCA 90 bp AGTGTTCATCAGAGTCCTGCCGGCACTAAGCGGAGCTGGTACCAGTaGCCGTTCACCCCACCCGTGAACAGCCTTGGGAGAGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: SVHQSPAGTKRSWYQ*PFTPPVNSLGRAAQ
Trigger: TTGTGCTGCTCTCCCAAGGCTGTTCACGGGTGGGGTGAACGGGCACTGGTACCAGCTCCGCTTAGTGCCGGCAGGACTCTGATGAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp ACAGCTGCCACACAGAAGAGCTCACGTGCACACCCGTGTGTAGGCTaGAGTGCATGCGACAGCAAGTTCCTGGCCATGCCTGTGCCACAG +
Preference number: 5 (lower is better)
Translates to: TAATQKSSRAHPCVG*SACDSKFLAMPVPQ
Trigger: CTGTGGCACAGGCATGGCCAGGAACTTGCTGTCGCATGCACTGCAGCCTACACACGGGTGTGCACGTGAGCTCTTCTGTGTGGCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 90 bp GGCGACGGAGGCTTTGGTGGCGTTGGAGACTGTGTCTGGCTGCTCTaGAACAGAATGACACCCCAGGGTCACGGTATGGAGAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: GDGGFGGVGDCVWLL*NRMTPQGHGMEREG
Trigger: GCCTTCTCTCTCCATACCGTGACCCTGGGGTGTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTaGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTTTC +
Preference number: 5 (lower is better)
Translates to: NQRLALALSGRVSRL*LTQRSATPPRRTVF
Trigger: GAAAACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000448368.5
ENST00000609318.5
CDS CCA 90 bp AGGGTCAAGAGTGTTCATCAGAGTCCTGCCGGCACTAAGCGGAGCTaGTACCAGTGCCCGTTCACCCCACCCGTGAACAGCCTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RVKSVHQSPAGTKRS*YQCPFTPPVNSLGR
Trigger: TCTCCCAAGGCTGTTCACGGGTGGGGTGAACGGGCACTGGTACCAGCTCCGCTTAGTGCCGGCAGGACTCTGATGAACACTCTTGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS CCA 90 bp AGCACTCACGAACAGCAGGGGCAGCTGAAGGCAAGGGAGACACTCTaGAGTGACTCCAGCCCACCAGATGGAAAGCAGGGCAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: STHEQQGQLKARETL*SDSSPPDGKQGSLS
Trigger: ACTCAGGCTGCCCTGCTTTCCATCTGGTGGGCTGGAGTCACTCCAGAGTGTCTCCCTTGCCTTCAGCTGCCCCTGCTGTTCGTGAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp GAAGCTGGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTGGTaGCGTTGGAGACTGTGTCTGGCTGCTCTGCAACAGAATGACACC +
Preference number: 5 (lower is better)
Translates to: EAGQPQLEAWRRRLW*RWRLCLAALQQNDT
Trigger: GGTGTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp AGGGAAGCTGGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTaGTGGCGTTGGAGACTGTGTCTGGCTGCTCTGCAACAGAATGAC +
Preference number: 5 (lower is better)
Translates to: REAGQPQLEAWRRRL*WRWRLCLAALQQND
Trigger: GTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp GCCATGAGGAGACCGAGCCCTGGCTCTCTTGTGGGACCTGCTGACCCCAGCAGAAGACCAGCAGTTGACTaGGATCGGAAACGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: AMRRPSPGSLVGPADPSRRPAVD*DRKRLV
Trigger: CACAAGCCGTTTCCGATCCAAGTCAACTGCTGGTCT...TCTGCTGGGGTCAGCAGGTCCCACAAGAGAGCCAGGGCTCGGTCTCCTCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CAA 90 bp AAGACTGAGGCTGGCAGAGTGGATTACAAACACCCACCACTCCGTGCTGTCCACCCCAGGGCCTGGTGGTaGCTGTCCCAGCTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: KTEAGRVDYKHPPLRAVHPRAWW*LSQLGP
Trigger: AGGACCAAGCTGGGACAGCAACCACCAGGCCCTGGG...GTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCCTCAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp TCACGAACAGCAGGGGCAGCTGAAGGCAAGGGAGACACTCTGGAGTaGCTCCAGCCCACCAGATGGAAAGCAGGGCAGCCTGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: SRTAGAAEGKGDTLE*LQPTRWKAGQPESR
Trigger: TCTAGACTCAGGCTGCCCTGCTTTCCATCTGGTGGGCTGGAGTCACTCCAGAGTGTCTCCCTTGCCTTCAGCTGCCCCTGCTGTTCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 90 bp TGCCACACAGAAGAGCTCACGTGCACACCCGTGTGTAGGCTGCAGTaGATGCGACAGCAAGTTCCTGGCCATGCCTGTGCCACAGCACAA +
Preference number: 5 (lower is better)
Translates to: CHTEELTCTPVCRLQ*MRQQVPGHACATAQ
Trigger: TTGTGCTGTGGCACAGGCATGGCCAGGAACTTGCTGTCGCATGCACTGCAGCCTACACACGGGTGTGCACGTGAGCTCTTCTGTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp GAAGCTGGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTGGTaGCGTTGGAGACTGTGTCTGGCTGCTTGTAAACTTCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: EAGQPQLEAWRRRLW*RWRLCLAACKLLLP
Trigger: AGGGAGGAGAAGTTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CCA 90 bp AGGGAAGCTGGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTaGTGGCGTTGGAGACTGTGTCTGGCTGCTTGTAAACTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: REAGQPQLEAWRRRL*WRWRLCLAACKLLL
Trigger: GAGGAGAAGTTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CCA 90 bp TCGAAGCTTGGCGACGGAGGCTTTGGTGGCGTTGGAGACTGTGTCTaGCTGCTCTGCAACAGAATGACACCCCAGGGTCACGGTATGGAG +
Preference number: 5 (lower is better)
Translates to: SKLGDGGFGGVGDCV*LLCNRMTPQGHGME
Trigger: CTCCATACCGTGACCCTGGGGTGTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp GGCCCTGGTCACCATCACCATTGGCATCCGATCCCTGCGGGCCACGGTCTGCGTAAGGTGGGATGGAACTaGTCTGAGAAGTGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: GPGHHHHWHPIPAGHGLRKVGWN*SEKWFE
Trigger: CTCAAACCACTTCTCAGACAAGTTCCATCCCACCTT...ACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CAA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACATGGTCACCATCACCATaGGCATCCGATCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: NQRLALALSGRVSRLWLTWSPSP*ASDPCG
Trigger: CCCGCAGGGATCGGATGCCAATGGTGATGGTGACCA...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGGGCCCAGCCTCTCTCTaGGCATATGCTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: QAPNQRLALALSGRVSRLGPASL*AYAEGF
Trigger: AAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGCC...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACGAGGCTTTGGTGGCGTaGGAGACTGTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PRTEWESVSFVVNTALCDEALVA*ETVSGC
Trigger: GCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTC...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGGGGAGAGTGTCTCGTTaGTGGTTAACACAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: QTLQAPNQRLALALSGRVGRVSR*WLTQRS
Trigger: AGAGCGCTGTGTTAACCACAAACGAGACACTCTCCC...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTGGCAGGCCTTGTGTTTaGGGAATGGCTGATGGCGCC +
Preference number: 5 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVGRPCV*GMADGA
Trigger: GGCGCCATCAGCCATTCCCAAAACACAAGGCCTGCC...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS GCA 90 bp TGTGGACTTGAGGGCTGGGGGCTCCCGGTATCTCTCTGCGGGCTCTaGCAGCTTCTTTTCCTCCTTCCCACAACCAACAGTGTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: CGLEGWGLPVSLCGL*QLLFLLPTTNSVWL
Trigger: AAGCCAAACACTGTTGGTTGTGGGAAGGAGGAAAAGAAGCTGGCAGAGCCCGCAGAGAGATACCGGGAGCCCCCAGCCCTCAAGTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316157.8
ENST00000448368.5
ENST00000609318.5
ENST00000614908.4
CDS GCA 90 bp CACAGTGAGGCTAAGGTGACATCCAAAGAGCTATCCACCCATGGCTaGCAGCACTCACGAACAGCAGGGGCAGCTGAAGGCAAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: HSEAKVTSKELSTHG*QHSRTAGAAEGKGD
Trigger: GTCTCCCTTGCCTTCAGCTGCCCCTGCTGTTCGTGAGTGCTGGCAGCCATGGGTGGATAGCTCTTTGGATGTCACCTTAGCCTCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAAGGAGACGCCGCAGGCTaGAACGCTGGAGACGTAAAC +
Preference number: 5 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKGDAAG*NAGDVN
Trigger: GTTTACGTCTCCAGCGTTCAAGCCTGCGGCGTCTCC...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTACCTGCTTGCCTTGTTaGTGGACTCCGGACACCATT +
Preference number: 5 (lower is better)
Translates to: TLQAPNQRLALALSGRVSTCLPC*WTPDTI
Trigger: AATGGTGTCCGGAGTCCACAAACAAGGCAAGCAGGT...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTAGTTTGACCTGCTaGCCTTGTTTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: QTLQAPNQRLALALSGRVSSLTC*PCLWTP
Trigger: CGGAGTCCACAAACAAGGCAAGCAGGTCAAACTAGA...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp AGCTCCCACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCAATCCGTGTTCTAGTTaGACCTGCTTGCCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: SSHISTDALARPALPLRGNPCSS*TCLPCL
Trigger: CAAACAAGGCAAGCAGGTCAAACTAGAACACGGATT...GCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGTGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGAATGAGGCCCTCGTCTaGGAGGTAAAAGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: QTLQAPNQRLALALSGRVNEALV*EVKEQE
Trigger: TTCCTGCTCTTTTACCTCCAAGACGAGGGCCTCATT...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGAGTAACTACAGTGTATaGACCGGAGGGCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: QAPNQRLALALSGRVSRLSNYSV*TGGQQS
Trigger: GCTCTGCTGCCCTCCGGTCAATACACTGTAGTTACT...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CTTCAGACTTTGGTGGGTGGAGGCGGAATACGTAAACCTCTGACAGCCATGAGGGGTTGCTGTCCCAGCTaGGTCCTGCAAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LQTLVGGGGIRKPLTAMRGCCPS*VLQAPL
Trigger: CAGAGGGGCTTGCAGGACCAAGCTGGGACAGCAACC...CCTCATGGCTGTCAGAGGTTTACGTATTCCGCCTCCACCCACCAAAGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp GCTTTGGTGGCGTTGGAGACTGTGTCTGGCTGCTCTGCAACAGAATaGCACCCCAGGGTCACGGTATGGAGAGAGAAGGCCAAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ALVALETVSGCSATE*HPRVTVWREKAKQL
Trigger: AAGCTGCTTGGCCTTCTCTCTCCATACCGTGACCCTGGGGTGTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp GGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTGGTGGCGTTaGAGACTGTGTCTGGCTGCTTGTAAACTTCTCCTCCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: GQPQLEAWRRRLWWR*RLCLAACKLLLPFL
Trigger: AAGAAAAGGGAGGAGAAGTTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CCA 90 bp TTACACGCGGTCGCAGTGAGGGCGGAAGGAAGTCTGTCCACACTGTaGGTTTCCCTCTGTTTCTCCGCCACCTTGGGATCATCGGGTAAA +
Preference number: 5 (lower is better)
Translates to: LHAVAVRAEGSLSTL*VSLCFSATLGSSGK
Trigger: TTTACCCGATGATCCCAAGGTGGCGGAGAAACAGAGGGAAACCCACAGTGTGGACAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000469487.1
ENST00000608970.1
ENST00000609318.5
ENST00000614908.4
CDS-3UTR CAA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATCTCCTCATGCAGCTGTaGAGCTCCCACTTCGGTCGA +
Preference number: 5 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADLLMQL*SSHFGR
Trigger: TCGACCGAAGTGGGAGCTCAACAGCTGCATGAGGAG...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp TTGCTTGCAGTGCATCAGAACCAAGGTTTCTGGGGTGGCCCCTGCAGGTTCACTTGTGACACAGCACAGTaGGCATGGACCGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: LLAVHQNQGFWGGPCRFTCDTAQ*AWTATA
Trigger: AGCTGTGGCGGTCCATGCCAACTGTGCTGTGTCACA...AGTGAACCTGCAGGGGCCACCCCAGAAACCTTGGTTCTGATGCACTGCAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS TCA 90 bp TGGAAATGGAGTTACCAAGGGTGGGTCAAGATAGCTGTGCGTTGCTaGCCACGTCTGGGGAGTGATCAGGCTGTACAGGGGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: WKWSYQGWVKIAVRC*PRLGSDQAVQGELL
Trigger: CAGCAGTTCCCCCTGTACAGCCTGATCACTCCCCAGACGTGGTCAGCAACGCACAGCTATCTTGACCCACCCTTGGTAACTCCATTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS TCA 90 bp GCCTGGCTCCACACGCCCAGGCCCAGCCTCTCTCTTGGCATATGCTaGAGGGTTTTGAATCCGTGTTCTAGTTTGACCTGCTTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: AWLHTPRPSLSLGIC*RVLNPCSSLTCLPC
Trigger: ACAAGGCAAGCAGGTCAAACTAGAACACGGATTCAAAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGCCTGGGCGTGTGGAGCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS TCA 90 bp CTCTGGAGACCACTACAGGAAGGGTGTTCACGCTTGCGTCTGCACTaGGGGTCTGAAACAGGGTCAAGAGTGTTCATCAGAGTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: LWRPLQEGCSRLRLH*GSETGSRVFIRVLP
Trigger: CGGCAGGACTCTGATGAACACTCTTGACCCTGTTTCAGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp CCCACCTGGCACTTTGGGCCCAGCACGGCACGGCACAACACCACATaGATATCTGCTGAGTGTCGAATCCTAACACAGTCCAACACAACT +
Preference number: 5 (lower is better)
Translates to: PTWHFGPSTARHNTT*ISAECRILTQSNTT
Trigger: AGTTGTGTTGGACTGTGTTAGGATTCGACACTCAGCAGATATGCATGTGGTGTTGTGCCGTGCCGTGCTGGGCCCAAAGTGCCAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp TATCCTCTGCCCCACAGATCGCCCACCCTTCTCTTTCTCGGCAAATaGCCCACTGTTCTTACATCACAGGCCCTTATCTCCTCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: YPLPHRSPTLLFLGK*PTVLTSQALISSPA
Trigger: TGCGGGAGAGGAGATAAGGGCCTGTGATGTAAGAACAGTGGGGCATTTGCCGAGAAAGAGAAGGGTGGGCGATCTGTGGGGCAGAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp AGGGTCTTCTCCAGCAAAAATGTCACAGAGCCCAGGACTATCCTCTaGCCCACAGATCGCCCACCCTTCTCTTTCTCGGCAAATGCCCCA +
Preference number: 5 (lower is better)
Translates to: RVFSSKNVTEPRTIL*PTDRPPFSFSANAP
Trigger: TGGGGCATTTGCCGAGAAAGAGAAGGGTGGGCGATCTGTGGGGCAGAGGATAGTCCTGGGCTCTGTGACATTTTTGCTGGAGAAGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp GGGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCTTGCGTCTaGACTGAGGGTCTGAAACAGGGTCAAGAGTGTTCATCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: GLSGDHYRKGVHACV*TEGLKQGQECSSES
Trigger: GGACTCTGATGAACACTCTTGACCCTGTTTCAGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTCTCCAGAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp CACCGAGGGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCTTaGGTCTGCACTGAGGGTCTGAAACAGGGTCAAGAGTGTTCATCA +
Preference number: 5 (lower is better)
Translates to: HRGLSGDHYRKGVHA*VCTEGLKQGQECSS
Trigger: TGATGAACACTCTTGACCCTGTTTCAGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTCTCCAGAGAGCCCTCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp TCATTTCAGACTCTCCGGTACAGCTGCCACACAGAAGAGCTCACGTaGACACCCGTGTGTAGGCTGCAGTGCATGCGACAGCAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: SFQTLRYSCHTEELT*TPVCRLQCMRQQVP
Trigger: AGGAACTTGCTGTCGCATGCACTGCAGCCTACACACGGGTGTGCACGTGAGCTCTTCTGTGTGGCAGCTGTACCGGAGAGTCTGAAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp TTCAGCCACAACCTTAGCGTCCTGATCAGAAGTCATGGGCTCCACTaGGAGAAGTGTAATGCTAACCTCAGGATGCTGTCAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: FSHNLSVLIRSHGLH*EKCNANLRMLSAPP
Trigger: CGGCGGCGCTGACAGCATCCTGAGGTTAGCATTACACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGGACGCTAAGGTTGTGGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000476529.5
ENST00000481118.1
CDS-3UTR CAA 90 bp ACATCAGCACTGATGCCCTGGCGCGGCCAGCACTGCCTCTACGAGGCCACACCTGTATTTGTAAGCCTGTaGTGCATCAGCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: TSALMPWRGQHCLYEATPVFVSL*CISFCF
Trigger: GAAACAGAAGCTGATGCACAACAGGCTTACAAATAC...AGGTGTGGCCTCGTAGAGGCAGTGCTGGCCGCGCCAGGGCATCAGTGCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACTTTGACCTGCTTGCCTaGTTTGTGGACTCCGGACAC +
Preference number: 5 (lower is better)
Translates to: PRTEWESVSFVVNTALCDFDLLA*FVDSGH
Trigger: GTGTCCGGAGTCCACAAACAAGGCAAGCAGGTCAAA...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCTCTAGTTTGACCTGCTaGCCTTGTTTGTGGACTCCG +
Preference number: 5 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPSSLTC*PCLWTP
Trigger: CGGAGTCCACAAACAAGGCAAGCAGGTCAAACTAGA...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGGCAACGTTTCAGTTCTaGATGCAGAAGACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: QAPNQRLALALSGRVSRLATFQF*MQKTAA
Trigger: AGCAGCAGTCTTCTGCATCAAGAACTGAAACGTTGC...CAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CAGACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGGAACGACGACTCCACTaGAAATTCATGTCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: QTLQAPNQRLALALSGRVERRLH*KFMSGE
Trigger: TTCACCAGACATGAATTTCAAGTGGAGTCGTCGTTC...CACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS TCA 90 bp TCCTGGACTCTCTGCGTCTGCGGTTCAGCCACAACCTTAGCGTCCTaGTCAGAAGTCATGGGCTCCACTGGGAGAAGTGTAATGCTAACC +
Preference number: 5 (lower is better)
Translates to: SWTLCVCGSATTLAS*SEVMGSTGRSVMLT
Trigger: GGTTAGCATTACACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGGACGCTAAGGTTGTGGCTGAACCGCAGACGCAGAGAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316157.8
ENST00000406525.6
ENST00000412411.1
ENST00000476529.5
ENST00000481118.1
CDS TCA 90 bp ACCACTACAGGAAGGGTGTTCACGCTTGCGTCTGCACTGAGGGTCTaGAACAGGGTCAAGAGTGTTCATCAGAGTCCTGCCGGCACTAAG +
Preference number: 5 (lower is better)
Translates to: TTTGRVFTLASALRV*NRVKSVHQSPAGTK
Trigger: CTTAGTGCCGGCAGGACTCTGATGAACACTCTTGACCCTGTTTCAGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 90 bp CAATGGGGAAGAAGGAGGCTCTTTACTCGTTCTCTGACAAATCTCTaGGTAGCTGGGCTTTCGCAATTCCGTGGCGGCTCCGTTCACCTG +
Preference number: 5 (lower is better)
Translates to: QWGRRRLFTRSLTNL*VAGLSQFRGGSVHL
Trigger: CAGGTGAACGGAGCCGCCACGGAATTGCGAAAGCCCAGCTACGCAGAGATTTGTCAGAGAACGAGTAAAGAGCCTCCTTCTTCCCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000609318.5
ENST00000614908.4
CDS CCA 90 bp GTTCCTGGCCATGCCTGTGCCACAGCACAACACGCCTGTGCACTGTaGAGTCCTGTGCAGCACATCGCTATTTCCAAAACCTCTACAGTT +
Preference number: 5 (lower is better)
Translates to: VPGHACATAQHACAL*SPVQHIAISKTSTV
Trigger: AACTGTAGAGGTTTTGGAAATAGCGATGTGCTGCACAGGACTCCACAGTGCACAGGCGTGTTGTGCTGTGGCACAGGCATGGCCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp GGGCTGGACCAGGATTTGTCCAGGTCTCCTCCAGCATTCCTTGTATaGAATTCCACATCTGCAAGCCCATGGAGGCATCCCTCCCATCTT +
Preference number: 5 (lower is better)
Translates to: GLDQDLSRSPPAFLV*NSTSASPWRHPSHL
Trigger: AAGATGGGAGGGATGCCTCCATGGGCTTGCAGATGTGGAATTCCATACAAGGAATGCTGGAGGAGACCTGGACAAATCCTGGTCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp AAACCAAGGACTCACTGGCGGACGGGCAGGCCTTGTGTTTTGGGAATGGCTGATCGTCAGCAGCACTGCTaGCTTCCAGATGTAACACAG +
Preference number: 5 (lower is better)
Translates to: KPRTHWRTGRPCVLGMADRQQHC*LPDVTQ
Trigger: CTGTGTTACATCTGGAAGCAAGCAGTGCTGCTGACG...ATCAGCCATTCCCAAAACACAAGGCCTGCCCGTCCGCCAGTGAGTCCTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTTCCTCTGTCTTCAAATaGCCGGCAGCTCCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVSSVFK*PAAPGN
Trigger: ATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGGA...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp AAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATGAAAATGCATCTCTGCGAGACATCACACACTaGGATATGGCCTGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: KAAAPAEEILVVNENASLRDITH*DMAWAD
Trigger: GTCAGCCCAGGCCATATCCAAGTGTGTGATGTCTCG...CAGAGATGCATTTTCATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp CTCATTTCCTCCTGTCTCGCTATTTTCAGGCAGAGAGTCATATTCTaGGGGACCCAGAGCGAGAGCGTTCATGTCTGCTGGGTCCGACTC +
Preference number: 5 (lower is better)
Translates to: LISSCLAIFRQRVIF*GTQSESVHVCWVRL
Trigger: GAGTCGGACCCAGCAGACATGAACGCTCTCGCTCTGGGTCCCTCAGAATATGACTCTCTGCCTGAAAATAGCGAGACAGGAGGAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS TCA 90 bp CTTTGGGCCCAGCACGGCACGGCACAACACCACATGCATATCTGCTaGGTGTCGAATCCTAACACAGTCCAACACAACTCATTCACACCG +
Preference number: 5 (lower is better)
Translates to: LWAQHGTAQHHMHIC*VSNPNTVQHNSFTP
Trigger: CGGTGTGAATGAGTTGTGTTGGACTGTGTTAGGATTCGACACTCAGCAGATATGCATGTGGTGTTGTGCCGTGCCGTGCTGGGCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS TCA 90 bp CTGCTGCCCAAGAGATGTGTCACAAAGGACACAGTGAGGCTAAGGTaGCATCCAAAGAGCTATCCACCCATGGCTGCCAGCACTCACGAA +
Preference number: 5 (lower is better)
Translates to: LLPKRCVTKDTVRLR*HPKSYPPMAASTHE
Trigger: TTCGTGAGTGCTGGCAGCCATGGGTGGATAGCTCTTTGGATGTCACCTTAGCCTCACTGTGTCCTTTGTGACACATCTCTTGGGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp GGTCCGACTCCTGCGGGTCTGGCAATGCGGCATTCTCATGGCCCTGGTCACCATTGTCTGAGAAGTGGTTaGAGATATAGGACCATTCAT +
Preference number: 5 (lower is better)
Translates to: GPTPAGLAMRHSHGPGHHCLRSG*RYRTIH
Trigger: ATGAATGGTCCTATATCTCAAACCACTTCTCAGACA...ATGGTGACCAGGGCCATGAGAATGCCGCATTGCCAGACCCGCAGGAGTCGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS-3UTR CAA 90 bp CCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACAAGGTGGGATGGAACTaGTCTGAGAAGTGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: PRTEWESVSFVVNTALCDKVGWN*SEKWFE
Trigger: CTCAAACCACTTCTCAGACAAGTTCCATCCCACCTT...GTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCCTGAGGGTCCTTTCTTaGGATGGTCCTATTATCAAG +
Preference number: 5 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPLRVLS*DGPIIK
Trigger: CTTGATAATAGGACCATCCAAAGAAAGGACCCTCAG...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp GAGCTTCGGCTGGGAAAAGCGGCTGCTCCGGCCGAGGAAATCCTGGTCGTGAATAGAGCTGGAATGCCTTaGTTACTGTCAAAACTTCAG +
Preference number: 5 (lower is better)
Translates to: ELRLGKAAAPAEEILVVNRAGMP*LLSKLQ
Trigger: CTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTCT...ATTCACGACCAGGATTTCCTCGGCCGGAGCAGCCGCTTTTCCCAGCCGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp CACTGCTGCACTCAGGCTCACTTATGCCATCTCTCAGCCATGGACTaGTCTCGCAGATGGCAAACAAAGTATACCCAGAGTCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: HCCTQAHLCHLSAMD*SRRWQTKYTQSPEE
Trigger: CTCCTCTGGACTCTGGGTATACTTTGTTTGCCATCTGCGAGATCAGTCCATGGCTGAGAGATGGCATAAGTGAGCCTGAGTGCAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412411.1
CDS CCA 90 bp CTGCTCACTGCTGCACTCAGGCTCACTTATGCCATCTCTCAGCCATaGACTGATCTCGCAGATGGCAAACAAAGTATACCCAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LLTAALRLTYAISQP*TDLADGKQSIPRVQ
Trigger: CTGGACTCTGGGTATACTTTGTTTGCCATCTGCGAGATCAGTCCATGGCTGAGAGATGGCATAAGTGAGCCTGAGTGCAGCAGTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412411.1
CDS CCA 90 bp TTCAGCCACAACCTTAGCGTCCTGATCAGAAGTCATGGGCTCCACTaGGAGAAGTGTAATGCTAACCTCAGGATGCTGCTCACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: FSHNLSVLIRSHGLH*EKCNANLRMLLTAA
Trigger: TGCAGCAGTGAGCAGCATCCTGAGGTTAGCATTACACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGGACGCTAAGGTTGTGGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412411.1
CDS-3UTR CAA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACAAATCCGTGTTCTAGTTaGACCTGCTTGCCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: NQRLALALSGRVSRLWLTNPCSS*TCLPCL
Trigger: CAAACAAGGCAAGCAGGTCAAACTAGAACACGGATT...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACGGGATCGCTCGTACGTaGCTGATACAGCACAAGAAG +
Preference number: 5 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDGIART*LIQHKK
Trigger: CTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCC...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTAACAGTGTTTGGCTTTaGTTCTTTTTGGGGTTGCAA +
Preference number: 5 (lower is better)
Translates to: TLQAPNQRLALALSGRVSNSVWL*FFLGLQ
Trigger: TTGCAACCCCAAAAAGAACAAAAGCCAAACACTGTT...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCCACAACCAACAGTGTTaGGCTTTTGTTCTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LSGRVSRLWLTQRSATPPHNQQC*AFVLFG
Trigger: CCCAAAAAGAACAAAAGCCAAACACTGTTGGTTGTG...GGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACACTCTCCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp TCACCTGCTGTCCCTCCTCTCCGTGGTGGAGACACCCACACACCTTCGTCTAAGCACAACCAACAGTGTTaGGCTTTTGTTCTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: SPAVPPLRGGDTHTPSSKHNQQC*AFVLFG
Trigger: CCCAAAAAGAACAAAAGCCAAACACTGTTGGTTGTG...CTTAGACGAAGGTGTGTGGGTGTCTCCACCACGGAGAGGAGGGACAGCAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CAA 90 bp AACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGTTTGTGGTTAACACTCACTATATATAGCTaGCATTCAGAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: NQRLALALSGRVSRLWLTLTIYS*HSEPHG
Trigger: TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAG...TGTTAACCACAAACGAGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp ACACTGCAAGCTCCTAACCAGCGGCTCGCCCTCGCACTGAGTGGGAGAGTGTCTCGATCCTGCCAGTTTTaGCTCTCTATATACTTTAAA +
Preference number: 5 (lower is better)
Translates to: TLQAPNQRLALALSGRVSRSCQF*LSIYFK
Trigger: TTTAAAGTATATAGAGAGCAAAAACTGGCAGGATCG...AGACACTCTCCCACTCAGTGCGAGGGCGAGCCGCTGGTTAGGAGCTTGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS GCA 90 bp GGGCCACAAGCCGAAGCTTCAAAGCAGGTCACAGTCATGAACACATaGATCAGGAATGCAAGGCAAAACAGAACGGAAGAGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: GPQAEASKQVTVMNT*IRNARQNRTEEKWL
Trigger: CAGCCATTTCTCTTCCGTTCTGTTTTGCCTTGCATTCCTGATGCATGTGTTCATGACTGTGACCTGCTTTGAAGCTTCGGCTTGTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 90 bp GTATCTTTTGTGATGAGAAAGCACCTGTGTGATGGCTTGAGGGGCTaGACCAGGATTTGTCCAGGTCTCCTCCAGCATTCCTTGTATGGA +
Preference number: 5 (lower is better)
Translates to: VSFVMRKHLCDGLRG*TRICPGLLQHSLYG
Trigger: TCCATACAAGGAATGCTGGAGGAGACCTGGACAAATCCTGGTCCAGCCCCTCAAGCCATCACACAGGTGCTTTCTCATCACAAAAGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp GTGTCTCGTTTGTGGTTAACACAGCGCTCTGCGACCCCTCCCAGACGTACGGTTAACAGTGTTTGGCTTTaGTTCTTTTTGGGGTTGCAA +
Preference number: 5 (lower is better)
Translates to: VSRLWLTQRSATPPRRTVNSVWL*FFLGLQ
Trigger: TTGCAACCCCAAAAAGAACAAAAGCCAAACACTGTT...AACCGTACGTCTGGGAGGGGTCGCAGAGCGCTGTGTTAACCACAAACGAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAACACAACCAACAGTGTTaGGCTTTTGTTCTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKHNQQC*AFVLFG
Trigger: CCCAAAAAGAACAAAAGCCAAACACTGTTGGTTGTG...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACAAGCTGGTTACTTGCTaGCAGTGCATCAGAACCAAG +
Preference number: 5 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDKLVTC*QCIRTK
Trigger: CTTGGTTCTGATGCACTGCAAGCAAGTAACCAGCTT...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAAAACTTTAGTGCATCCTaGTTCTTCAGAAGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKNFSAS*FFRSAA
Trigger: TGCTGCACTTCTGAAGAACAAGGATGCACTAAAGTT...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACTTGGGTCTGGATCGGAAACGGCTaGTGCCCAAGCAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LECLCYCQNFRAKTITWVWIGNG*CPSRPS
Trigger: GCTGGGCCTGCTTGGGCACAAGCCGTTTCCGATCCA...GACCCAAGTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp ACAACACTGGGCCACAAGCCGAAGCTTCAAAGCAGGTCACAGTCATaGACACATGCATCAGGAATGCAAGGCAAAACAGAACGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: TTLGHKPKLQSRSQS*THASGMQGKTERKR
Trigger: TCTCTTCCGTTCTGTTTTGCCTTGCATTCCTGATGCATGTGTTCATGACTGTGACCTGCTTTGAAGCTTCGGCTTGTGGCCCAGTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 90 bp TCTCAACAGGTGAGGAAACTGAGGCCCAATACCTCTAAGTTAATTTaGCCAAGGCCAGGAAGCAAAGGACGGAGTGAAACTTACTCCCTC +
Preference number: 5 (lower is better)
Translates to: SQQVRKLRPNTSKLI*PRPGSKGRSETYSL
Trigger: GAGGGAGTAAGTTTCACTCCGTCCTTTGCTTCCTGGCCTTGGGCAAATTAACTTAGAGGTATTGGGCCTCAGTTTCCTCACCTGTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS CCA 90 bp AGCACTTCCACAATCAAGTCCACATCAGTGCTGAGCTTCTTGATGTaGTCGAGGTTAGCCACCGTTGTGATTGGCACATACTGGTCACTA +
Preference number: 5 (lower is better)
Translates to: STSTIKSTSVLSFLM*SRLATVVIGTYWSL
Trigger: TAGTGACCAGTATGTGCCAATCACAACGGTGGCTAACCTCGACCACATCAAGAAGCTCAGCACTGATGTGGACTTGATTGTGGAAGTGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CCA 90 bp AACACATGCATCAGGAATGCAAGGCAAAACAGAACGGAAGAGAAATaGCTGTGGGAAAACATCACGGCAGGCACAACAGTGCCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: NTCIRNARQNRTEEK*LWENITAGTTVPCV
Trigger: AACACAGGGCACTGTTGTGCCTGCCGTGATGTTTTCCCACAGCCATTTCTCTTCCGTTCTGTTTTGCCTTGCATTCCTGATGCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp CTGGCTCTAACCACACACACACACTGCGCTGCAATGCTCACACCTTGGGGGAAATGTCTGAGAAGTGGTTaGAGATATAGGACCATTCAT +
Preference number: 5 (lower is better)
Translates to: LALTTHTHCAAMLTPWGKCLRSG*RYRTIH
Trigger: ATGAATGGTCCTATATCTCAAACCACTTCTCAGACA...TTTCCCCCAAGGTGTGAGCATTGCAGCGCAGTGTGTGTGTGTGGTTAGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp AAGACTGAGGCTGGCAGAGTGGATTACAAACACCCACCACTCCGTGCTGTCCACAACAGTGTTTGGCTTTaGTTCTTTTTGGGGTTGCAA +
Preference number: 5 (lower is better)
Translates to: KTEAGRVDYKHPPLRAVHNSVWL*FFLGLQ
Trigger: TTGCAACCCCAAAAAGAACAAAAGCCAAACACTGTT...GTGGACAGCACGGAGTGGTGGGTGTTTGTAATCCACTCTGCCAGCCTCAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CAA 90 bp GCAAGGAATGGAATACAACAACTTCAGACTTTGGTGGGTGGAGGCGGAATACGTCAACAACTTCAGACTTaGGTGGGTGGAGGCGGAATA +
Preference number: 5 (lower is better)
Translates to: ARNGIQQLQTLVGGGGIRQQLQT*VGGGGI
Trigger: TATTCCGCCTCCACCCACCAAAGTCTGAAGTTGTTG...ACGTATTCCGCCTCCACCCACCAAAGTCTGAAGTTGTTGTATTCCATTCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp CACCGACAAACAAATTGCTCCGTGGAAGATGCTTACTCTGCTCATTaGAATGAATGGCTCCAGTCATTTCAGACTCTCCGGTACAGCTGC +
Preference number: 5 (lower is better)
Translates to: HRQTNCSVEDAYSAH*NEWLQSFQTLRYSC
Trigger: GCAGCTGTACCGGAGAGTCTGAAATGACTGGAGCCATTCATTTCAATGAGCAGAGTAAGCATCTTCCACGGAGCAATTTGTTTGTCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 90 bp GCAAAAGAGGCAGGCAACAACTGCCCAGATGTGGGAGTTACAAAATaGCATCACCCACAGATGGGACTTGACTTGGAAGGCAGTGTTAAA +
Preference number: 5 (lower is better)
Translates to: AKEAGNNCPDVGVTK*HHPQMGLDLEGSVK
Trigger: TTTAACACTGCCTTCCAAGTCAAGTCCCATCTGTGGGTGATGTCATTTTGTAACTCCCACATCTGGGCAGTTGTTGCCTGCCTCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp TGGAGAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAAGGGATCGCTCGTACGTaGCTGATACAGCACAAGAAG +
Preference number: 5 (lower is better)
Translates to: WRNRSWGLVTTQETSIDQGIART*LIQHKK
Trigger: CTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCC...TTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CAA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAGAGGCTTTGGTGGCGTaGGAGACTGTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLEALVA*ETVSGC
Trigger: GCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTC...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp TGCGCTGCAATGCTCACACCTTGGGGGAAAGGACTTCTCATTATTAAAAACCAATGCAATGCTCACACCTaGGGGGAAAGGACTTCTCAT +
Preference number: 5 (lower is better)
Translates to: CAAMLTPWGKGLLIIKNQCNAHT*GERTSH
Trigger: ATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCA...TTGGTTTTTAATAATGAGAAGTCCTTTCCCCCAAGGTGTGAGCATTGCAGCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp AGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTTGAGTTCTGGCAGGGTTaGTTATGTGGCAACAGCAAG +
Preference number: 5 (lower is better)
Translates to: SSGRVCYVATASQYLILVEFWQG*LCGNSK
Trigger: CTTGCTGTTGCCACATAACAAACCCTGCCAGAACTC...AACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp CTCACACACTTTTACAGAAAAAGCGTCTGGACCTTTCTGAGGTCCTaGGAGCACGTACATAAGACGATGGGCGTATGCTCTGTAATCAAT +
Preference number: 5 (lower is better)
Translates to: LTHFYRKSVWTFLRS*EHVHKTMGVCSVIN
Trigger: ATTGATTACAGAGCATACGCCCATCGTCTTATGTACGTGCTCTCAGGACCTCAGAAAGGTCCAGACGCTTTTTCTGTAAAAGTGTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 90 bp CGAAGCTTCAAAGCAGGTCACAGTCATGAACACATGCATCAGGAATaGAAGGCAAAACAGAACGGAAGAGAAATGGCTGTGGGAAAACAT +
Preference number: 5 (lower is better)
Translates to: RSFKAGHSHEHMHQE*KAKQNGREMAVGKH
Trigger: ATGTTTTCCCACAGCCATTTCTCTTCCGTTCTGTTTTGCCTTGCATTCCTGATGCATGTGTTCATGACTGTGACCTGCTTTGAAGCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 90 bp CTGACCAGGAAGCAAAGATCTCATGGGATCCACCTAACTGGAAAGTaGCAATGTTTCTCCAAAGTTTATACACAGGAAGGTGAATCCCTG +
Preference number: 5 (lower is better)
Translates to: LTRKQRSHGIHLTGK*QCFSKVYTQEGESL
Trigger: CAGGGATTCACCTTCCTGTGTATAAACTTTGGAGAAACATTGGCACTTTCCAGTTAGGTGGATCCCATGAGATCTTTGCTTCCTGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACTACTATGCAGCGATTTaGATTTGGCCTTACTTTTTC +
Preference number: 5 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDYYAAI*IWPYFF
Trigger: GAAAAAGTAAGGCCAAATCAAAATCGCTGCATAGTA...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp GATGACAGGAGGGCCTGGGTGAAAATGTCAAGACACTCACTCTCAGAGAACGACCTGAGTATTGAGAGTTaGGGTTTCACAGATCAATTA +
Preference number: 5 (lower is better)
Translates to: DDRRAWVKMSRHSLSENDLSIES*GFTDQL
Trigger: TAATTGATCTGTGAAACCCAAACTCTCAATACTCAG...GTCGTTCTCTGAGAGTGAGTGTCTTGACATTTTCACCCAGGCCCTCCTGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp ACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAACAGGAGCTGGGGTCTaGTTACTACTCAAGAAACCT +
Preference number: 5 (lower is better)
Translates to: TGAGVLLLLKKPLLTNTETGAGV*LLLKKP
Trigger: AGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGT...TTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS CCA 90 bp TTCTTGATGTGGTCGAGGTTAGCCACCGTTGTGATTGGCACATACTaGTCACTATCCATCTGTGATATAAGATACATGTCACTAGCAAGG +
Preference number: 5 (lower is better)
Translates to: FLMWSRLATVVIGTY*SLSICDIRYMSLAR
Trigger: CCTTGCTAGTGACATGTATCTTATATCACAGATGGATAGTGACCAGTATGTGCCAATCACAACGGTGGCTAACCTCGACCACATCAAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTAGGCCCAGCCTCTCTCTaGGCATATGCTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLGPASL*AYAEGF
Trigger: AAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGCC...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp TGGAGAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACTGAGGGTCCTTTCTTaGGATGGTCCTATTATCAAG +
Preference number: 5 (lower is better)
Translates to: WRNRSWGLVTTQETSIDQLRVLS*DGPIIK
Trigger: CTTGATAATAGGACCATCCAAAGAAAGGACCCTCAG...TTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CAA 90 bp GAAAGAGCTGGAATGCCTTTGTTACTGTCAAAACTTCAGAGCAAAGACAATTACGGGATCGCTCGTACGTaGCTGATACAGCACAAGAAG +
Preference number: 5 (lower is better)
Translates to: ERAGMPLLLSKLQSKDNYGIART*LIQHKK
Trigger: CTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCC...GTAATTGTCTTTGCTCTGAAGTTTTGACAGTAACAAAGGCATTCCAGCTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS-3UTR CAA 90 bp GAGTTCTGGCAGGGTTTGTTATGTGGCAACAGCAAGTCAATACCTCATCCTAGTGTGGTCCTTCTTCAGTaGGTTCAATCCAATGCTTTA +
Preference number: 5 (lower is better)
Translates to: EFWQGLLCGNSKSIPHPSVVLLQ*VQSNAL
Trigger: TAAAGCATTGGATTGAACCAACTGAAGAAGGACCAC...ACTAGGATGAGGTATTGACTTGCTGTTGCCACATAACAAACCCTGCCAGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614908.4
CDS TCA 90 bp GGAAAACATCACGGCAGGCACAACAGTGCCCTGTGTTTAGATGCTTaGCTTGTTAGTCCAAATGGTCACAGGAATTCACTAATTCCAATT +
Preference number: 5 (lower is better)
Translates to: GKHHGRHNSALCLDA*LVSPNGHRNSLIPI
Trigger: AATTGGAATTAGTGAATTCCTGTGACCATTTGGACTAACAAGTCAAGCATCTAAACACAGGGCACTGTTGTGCCTGCCGTGATGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp CAGACTTATGCATCACCTCCAGTTAAGCACCAACCTAAAATAAGGTTTGTATTATCAGTGCTGAGCTTCTaGATGTGGTCGAGGTTAGCC +
Preference number: 5 (lower is better)
Translates to: QTYASPPVKHQPKIRFVLSVLSF*MWSRLA
Trigger: GGCTAACCTCGACCACATCAAGAAGCTCAGCACTGA...TAATACAAACCTTATTTTAGGTTGGTGCTTAACTGGAGGTGATGCATAAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS-3UTR CAA 90 bp GCTGGGGTCTTGTTACTACTCAAGAAACCTCTATTGACCAACACTGAAATAAAATCCTCTGTCTTCAAATaGCCGGCAGCTCCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: AGVLLLLKKPLLTNTEIKSSVFK*PAAPGN
Trigger: ATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGGA...TTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440895.2
CDS-3UTR CAA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCGGGATCGCTCGTACGTaGCTGATACAGCACAAGAAG +
Preference number: 5 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGGIART*LIQHKK
Trigger: CTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCC...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CCA 90 bp TTAGCTGAAACAATGAGCTACTCTGACCAGGAAGCAAAGATCTCATaGGATCCACCTAACTGGAAAGTGCCAATGTTTCTCCAAAGTTTA +
Preference number: 5 (lower is better)
Translates to: LAETMSYSDQEAKIS*DPPNWKVPMFLQSL
Trigger: TAAACTTTGGAGAAACATTGGCACTTTCCAGTTAGGTGGATCCCATGAGATCTTTGCTTCCTGGTCAGAGTAGCTCATTGTTTCAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCTCCTCTGTCTTCAAATaGCCGGCAGCTCCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGSSVFK*PAAPGN
Trigger: ATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGGA...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp TCCCTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGATTCCTGGCTGTCTGGTaGAGACTCATTTCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: SLNLEKLTIYSLHSEPHGFLAVW*RLISSC
Trigger: ACAGGAGGAAATGAGTCTCAACCAGACAGCCAGGAA...TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS TCA 90 bp AAGGAGATAATGCTTTCTACACAGTGGGAGAGTATTCGAAAGTTTTaGAGGAAAAACACCGACAAACAAATTGCTCCGTGGAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: KEIMLSTQWESIRKF*RKNTDKQIAPWKML
Trigger: AAGCATCTTCCACGGAGCAATTTGTTTGTCGGTGTTTTTCCTTCAAAACTTTCGAATACTCTCCCACTGTGTAGAAAGCATTATCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS-3UTR CAA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCCTGAGGGTCCTTTCTTaGGATGGTCCTATTATCAAG +
Preference number: 5 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGLRVLS*DGPIIK
Trigger: CTTGATAATAGGACCATCCAAAGAAAGGACCCTCAG...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS-3UTR CAA 90 bp CTTAATTTAGAAAAACTCACTATATATAGCTTGCATTCAGAGCCACATGGAGGCCTCACTATATATAGCTaGCATTCAGAGCCACATGGA +
Preference number: 5 (lower is better)
Translates to: LNLEKLTIYSLHSEPHGGLTIYS*HSEPHG
Trigger: TCCATGTGGCTCTGAATGCAAGCTATATATAGTGAG...GCCTCCATGTGGCTCTGAATGCAAGCTATATATAGTGAGTTTTTCTAAATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CCA 72 bp GCCGGGCCGGAGGTAGGGGAGAGGGCGGGCGCGAGCTaGCGGCGGCGGCGGCGGCGGATTCTTCCCCTTTCG +
Preference number: 6 (lower is better)
Translates to: AGPEVGERAGAS*RRRRRRILPLS
Trigger: CGAAAGGGGAAGAATCCGCCGCCGCCGCCGCCGCCAGCTCGCGCCCGCCCTCTCCCCTACCTCCGGCCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS GCA 72 bp GCAGCGTCTGTTCACACCAGAGCCTCGCGGCTGTCGTaGAGGAAGGCAGGCACGAGGTACGTACCGTGGCGG +
Preference number: 6 (lower is better)
Translates to: AASVHTRASRLS*RKAGTRYVPWR
Trigger: CCGCCACGGTACGTACCTCGTGCCTGCCTTCCTGCACGACAGCCGCGAGGCTCTGGTGTGAACAGACGCTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
CDS GCA 72 bp AGGCACGAGGTACGTACCGTGGCGGCTCCGTTCACCTaGACCGATTTACACGCGGTCGCAGTGAGGGCGGAA +
Preference number: 6 (lower is better)
Translates to: RHEVRTVAAPFT*TDLHAVAVRAE
Trigger: TTCCGCCCTCACTGCGACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGCCACGGTACGTACCTCGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
CDS GCA 72 bp CAGAGTCCTGCCGGCACTAAGCGGAGCTGGTACCAGTaGCCGTTCACCCCACCCGTGAACAGCCTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: QSPAGTKRSWYQ*PFTPPVNSLGR
Trigger: TCTCCCAAGGCTGTTCACGGGTGGGGTGAACGGGCACTGGTACCAGCTCCGCTTAGTGCCGGCAGGACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS CCA 72 bp CTGTCGTGCAGGAAGGCAGGCACGAGGTACGTACCGTaGCGGCTCCGTTCACCTGCACCGATTTACACGCGG +
Preference number: 6 (lower is better)
Translates to: LSCRKAGTRYVP*RLRSPAPIYTR
Trigger: CCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGCCACGGTACGTACCTCGTGCCTGCCTTCCTGCACGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
CDS CAA 90 bp CAGCTCCAGGTAATGGAGGGAAGCTGGACAGCCCCAGCTCGAAGCTaGGCGACGGAGGCTTTGGTGGCGTTGGAGACTGTGTCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: QLQVMEGSWTAPARS*ATEALVALETVSGC
Trigger: GCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTCCCTCCATTACCTGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000448368.5
ENST00000609318.5
CDS TCA 72 bp AGCGGAGCTGGTACCAGTGCCCGTTCACCCCACCCGTaGACAGCCTTGGGAGAGCAGCACAAGGACATAGGG +
Preference number: 6 (lower is better)
Translates to: SGAGTSARSPHP*TALGEQHKDIG
Trigger: CCCTATGTCCTTGTGCTGCTCTCCCAAGGCTGTTCACGGGTGGGGTGAACGGGCACTGGTACCAGCTCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS TCA 72 bp CCATGGCTGCCAGCACTCACGAACAGCAGGGGCAGCTaGAGGCAAGGGAGACACTCTGGAGTGACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PWLPALTNSRGS*RQGRHSGVTPA
Trigger: GGCTGGAGTCACTCCAGAGTGTCTCCCTTGCCTTCAGCTGCCCCTGCTGTTCGTGAGTGCTGGCAGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp CTGGGCTTTCGCAATTCCGTGGCGGCTCCGTTCACCTaGACCGATTTACACGCGGTCGCAGTGAGGGCGGAA +
Preference number: 6 (lower is better)
Translates to: LGFRNSVAAPFT*TDLHAVAVRAE
Trigger: TTCCGCCCTCACTGCGACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGCCACGGAATTGCGAAAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000609318.5
ENST00000614908.4
CDS CCA 72 bp GGCTGTACAGGGGGAACTGCTGCTGGGGGCTGTACATaGGAGGGAAGTAGAACGACGTCGCGTAGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: GCTGGTAAGGCT*EGSRTTSRSAA
Trigger: AGCAGCGCTACGCGACGTCGTTCTACTTCCCTCCCATGTACAGCCCCCAGCAGCAGTTCCCCCTGTACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CCA 72 bp CAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTGGTaGCGTTGGAGACTGTGTCTGGCTGCTCTGCAACAG +
Preference number: 6 (lower is better)
Translates to: QPQLEAWRRRLW*RWRLCLAALQQ
Trigger: CTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp GGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTaGTGGCGTTGGAGACTGTGTCTGGCTGCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: GQPQLEAWRRRL*WRWRLCLAALQ
Trigger: TTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 72 bp TGGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTaGGTGGCGTTGGAGACTGTGTCTGGCTGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: WTAPARSLATEA*VALETVSGCSA
Trigger: TGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp AGCTCACGTGCACACCCGTGTGTAGGCTGCAGTGCATaGGACAGCAAGTTCCTGGCCATGCCTGTGCCACAG +
Preference number: 6 (lower is better)
Translates to: SSRAHPCVGCSA*DSKFLAMPVPQ
Trigger: CTGTGGCACAGGCATGGCCAGGAACTTGCTGTCGCATGCACTGCAGCCTACACACGGGTGTGCACGTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp GAAGAGCTCACGTGCACACCCGTGTGTAGGCTGCAGTaGATGCGACAGCAAGTTCCTGGCCATGCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: EELTCTPVCRLQ*MRQQVPGHACA
Trigger: GGCACAGGCATGGCCAGGAACTTGCTGTCGCATGCACTGCAGCCTACACACGGGTGTGCACGTGAGCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp CTAGGATCTGAGCACCTCTGGGTGAGGTCTGAGTACTaGTCAGGTCCCATGGGCGTGGTTAGGCCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: LGSEHLWVRSEY*SGPMGVVRPEA
Trigger: AGCCTCGGGCCTAACCACGCCCATGGGACCTGAGCAGTACTCAGACCTCACCCAGAGGTGCTCAGATCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp TCAAATTGCCGGCAGCTCCAGGTAATGGAGGGAAGCTaGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCT +
Preference number: 6 (lower is better)
Translates to: SNCRQLQVMEGS*TAPARSLATEA
Trigger: AGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTCCCTCCATTACCTGGAGCTGCCGGCAATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000448368.5
ENST00000609318.5
CDS CCA 72 bp AGTGTTCATCAGAGTCCTGCCGGCACTAAGCGGAGCTaGTACCAGTGCCCGTTCACCCCACCCGTGAACAGC +
Preference number: 6 (lower is better)
Translates to: SVHQSPAGTKRS*YQCPFTPPVNS
Trigger: GCTGTTCACGGGTGGGGTGAACGGGCACTGGTACCAGCTCCGCTTAGTGCCGGCAGGACTCTGATGAACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS CCA 72 bp GGCGACGGAGGCTTTGGTGGCGTTGGAGACTGTGTCTaGCTGCTCTGCAACAGAATGACACCCCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: GDGGFGGVGDCV*LLCNRMTPQGH
Trigger: GTGACCCTGGGGTGTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 72 bp GTAATGGAGGGAAGCTGGACAGCCCCAGCTCGAAGCTaGGCGACGGAGGCTTTGGTGGCGTTGGAGACTGTG +
Preference number: 6 (lower is better)
Translates to: VMEGSWTAPARS*ATEALVALETV
Trigger: CACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCCAGCTTCCCTCCATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000448368.5
ENST00000609318.5
CDS CAA 72 bp CGGGTAAATGAGCTGGGGAGGGGGATCGCTCGTACGTaGCTGATACAGCACAAGAAGCCGGCACCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: RVNELGRGIART*LIQHKKPAPRA
Trigger: AGCCCTCGGTGCCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCCCCTCCCCAGCTCATTTACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000469487.1
ENST00000608970.1
ENST00000609318.5
CDS GCA 72 bp ACTCTCCGGTACAGCTGCCACACAGAAGAGCTCACGTaGACACCCGTGTGTAGGCTGCAGTGCATGCGACAG +
Preference number: 6 (lower is better)
Translates to: TLRYSCHTEELT*TPVCRLQCMRQ
Trigger: CTGTCGCATGCACTGCAGCCTACACACGGGTGTGCACGTGAGCTCTTCTGTGTGGCAGCTGTACCGGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp GGACAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTaGTGGCGTTGGAGACTGTGTCTGGCTGCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: GQPQLEAWRRRL*WRWRLCLAACK
Trigger: TTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CAA 90 bp TGGGATCATCGGGTAAATGAGCTGGGGAGGGGGATCGCTCGTACGTaGCTGATACAGCACAAGAAGCCGGCACCGAGGGCTCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: WDHRVNELGRGIART*LIQHKKPAPRALWR
Trigger: TCTCCAGAGAGCCCTCGGTGCCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCCCCTCCCCAGCTCATTTACCCGATGATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000469487.1
ENST00000608970.1
ENST00000609318.5
CDS TCA 72 bp CTCCGTTCACCTGCACCGATTTACACGCGGTCGCAGTaGGGGCGGAAGGAAGTCTGTCCACACTGTGGGTTT +
Preference number: 6 (lower is better)
Translates to: LRSPAPIYTRSQ*GRKEVCPHCGF
Trigger: AAACCCACAGTGTGGACAGACTTCCTTCCGCCCTCACTGCGACCGCGTGTAAATCGGTGCAGGTGAACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
ENST00000609318.5
ENST00000614908.4
CDS GCA 72 bp ACACAGAAGAGCTCACGTGCACACCCGTGTGTAGGCTaGAGTGCATGCGACAGCAAGTTCCTGGCCATGCCT +
Preference number: 6 (lower is better)
Translates to: TQKSSRAHPCVG*SACDSKFLAMP
Trigger: AGGCATGGCCAGGAACTTGCTGTCGCATGCACTGCAGCCTACACACGGGTGTGCACGTGAGCTCTTCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp GCTAAGGTGACATCCAAAGAGCTATCCACCCATGGCTaGCAGCACTCACGAACAGCAGGGGCAGCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: AKVTSKELSTHG*QHSRTAGAAEG
Trigger: GCCTTCAGCTGCCCCTGCTGTTCGTGAGTGCTGGCAGCCATGGGTGGATAGCTCTTTGGATGTCACCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp GGCTTTGGTGGCGTTGGAGACTGTGTCTGGCTGCTCTaGAACAGAATGACACCCCAGGGTCACGGTATGGAG +
Preference number: 6 (lower is better)
Translates to: GFGGVGDCVWLL*NRMTPQGHGME
Trigger: CTCCATACCGTGACCCTGGGGTGTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp CAGCCCCAGCTCGAAGCTTGGCGACGGAGGCTTTGGTaGCGTTGGAGACTGTGTCTGGCTGCTTGTAAACTT +
Preference number: 6 (lower is better)
Translates to: QPQLEAWRRRLW*RWRLCLAACKL
Trigger: AAGTTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CCA 72 bp CTGATACAGCACAAGAAGCCGGCACCGAGGGCTCTCTaGAGACCACTACAGGAAGGGTGTTCACGCTTGCGT +
Preference number: 6 (lower is better)
Translates to: LIQHKKPAPRAL*RPLQEGCSRLR
Trigger: ACGCAAGCGTGAACACCCTTCCTGTAGTGGTCTCCAGAGAGCCCTCGGTGCCGGCTTCTTGTGCTGTATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000469487.1
ENST00000608970.1
ENST00000609318.5
CDS CCA 72 bp GTCGCAGTGAGGGCGGAAGGAAGTCTGTCCACACTGTaGGTTTCCCTCTGTTTCTCCGCCACCTTGGGATCA +
Preference number: 6 (lower is better)
Translates to: VAVRAEGSLSTL*VSLCFSATLGS
Trigger: TGATCCCAAGGTGGCGGAGAAACAGAGGGAAACCCACAGTGTGGACAGACTTCCTTCCGCCCTCACTGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000469487.1
ENST00000608970.1
ENST00000609318.5
ENST00000614908.4
CDS CCA 72 bp CAGCTCGAAGCTTGGCGACGGAGGCTTTGGTGGCGTTaGAGACTGTGTCTGGCTGCTCTGCAACAGAATGAC +
Preference number: 6 (lower is better)
Translates to: QLEAWRRRLWWR*RLCLAALQQND
Trigger: GTCATTCTGTTGCAGAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 72 bp GAACAGGCATCAAACACATCTCACCCACCTGGCACTTaGGGCCCAGCACGGCACGGCACAACACCACATGCA +
Preference number: 6 (lower is better)
Translates to: EQASNTSHPPGT*GPARHGTTPHA
Trigger: TGCATGTGGTGTTGTGCCGTGCCGTGCTGGGCCCAAAGTGCCAGGTGGGTGAGATGTGTTTGATGCCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS TCA 72 bp AGTTACCAAGGGTGGGTCAAGATAGCTGTGCGTTGCTaGCCACGTCTGGGGAGTGATCAGGCTGTACAGGGG +
Preference number: 6 (lower is better)
Translates to: SYQGWVKIAVRC*PRLGSDQAVQG
Trigger: CCCCTGTACAGCCTGATCACTCCCCAGACGTGGTCAGCAACGCACAGCTATCTTGACCCACCCTTGGTAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CCA 72 bp CAGCTCGAAGCTTGGCGACGGAGGCTTTGGTGGCGTTaGAGACTGTGTCTGGCTGCTTGTAAACTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: QLEAWRRRLWWR*RLCLAACKLLL
Trigger: GAGGAGAAGTTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS CCA 72 bp AACAGGCATCAAACACATCTCACCCACCTGGCACTTTaGGCCCAGCACGGCACGGCACAACACCACATGCAT +
Preference number: 6 (lower is better)
Translates to: NRHQTHLTHLAL*AQHGTAQHHMH
Trigger: ATGCATGTGGTGTTGTGCCGTGCCGTGCTGGGCCCAAAGTGCCAGGTGGGTGAGATGTGTTTGATGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS CAA 90 bp TTGAGGGGCTGGACCAGGATTTGTCCAGGTCTCCTCCAGCATTCCTaGTATGGAATTCCACATCTGCAAGCCCATGGAGGCATCCCTCCC +
Preference number: 6 (lower is better)
Translates to: LRGWTRICPGLLQHS*YGIPHLQAHGGIPP
Trigger: GGGAGGGATGCCTCCATGGGCTTGCAGATGTGGAATTCCATACAAGGAATGCTGGAGGAGACCTGGACAAATCCTGGTCCAGCCCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp CTCTGCGTCTGCGGTTCAGCCACAACCTTAGCGTCCTaGTCAGAAGTCATGGGCTCCACTGGGAGAAGTGTA +
Preference number: 6 (lower is better)
Translates to: LCVCGSATTLAS*SEVMGSTGRSV
Trigger: TACACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGGACGCTAAGGTTGTGGCTGAACCGCAGACGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316157.8
ENST00000406525.6
ENST00000412411.1
ENST00000476529.5
ENST00000481118.1
CDS TCA 72 bp GGAAGGGTGTTCACGCTTGCGTCTGCACTGAGGGTCTaGAACAGGGTCAAGAGTGTTCATCAGAGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: GRVFTLASALRV*NRVKSVHQSPA
Trigger: GGCAGGACTCTGATGAACACTCTTGACCCTGTTTCAGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 72 bp CTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCTTaGGTCTGCACTGAGGGTCCTTTCTTTGGATGGTCC +
Preference number: 6 (lower is better)
Translates to: LSGDHYRKGVHA*VCTEGPFFGWS
Trigger: GGACCATCCAAAGAAAGGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTCTCCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
ENST00000609318.5
CDS GCA 72 bp CCCCACAGATCGCCCACCCTTCTCTTTCTCGGCAAATaGCCCACTGTTCTTACATCACAGGCCCTTATCTCC +
Preference number: 6 (lower is better)
Translates to: PHRSPTLLFLGK*PTVLTSQALIS
Trigger: GGAGATAAGGGCCTGTGATGTAAGAACAGTGGGGCATTTGCCGAGAAAGAGAAGGGTGGGCGATCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 72 bp TCCAGCAAAAATGTCACAGAGCCCAGGACTATCCTCTaGCCCACAGATCGCCCACCCTTCTCTTTCTCGGCA +
Preference number: 6 (lower is better)
Translates to: SSKNVTEPRTIL*PTDRPPFSFSA
Trigger: TGCCGAGAAAGAGAAGGGTGGGCGATCTGTGGGGCAGAGGATAGTCCTGGGCTCTGTGACATTTTTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 72 bp CTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCTTaGGTCTGCACTGAGGGTCTGAAACAGGGTCAAGAG +
Preference number: 6 (lower is better)
Translates to: LSGDHYRKGVHA*VCTEGLKQGQE
Trigger: CTCTTGACCCTGTTTCAGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTCTCCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 72 bp GAATGGCTCCAGTCATTTCAGACTCTCCGGTACAGCTaGCACACAGAAGAGCTCACGTGCACACCCGTGTGT +
Preference number: 6 (lower is better)
Translates to: EWLQSFQTLRYS*HTEELTCTPVC
Trigger: ACACACGGGTGTGCACGTGAGCTCTTCTGTGTGGCAGCTGTACCGGAGAGTCTGAAATGACTGGAGCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp GTGATGAGAAAGCACCTGTGTGATGGCTTGAGGGGCTaGACCAGGATTTGTCCAGGTCTCCTCCAGCATTCC +
Preference number: 6 (lower is better)
Translates to: VMRKHLCDGLRG*TRICPGLLQHS
Trigger: GGAATGCTGGAGGAGACCTGGACAAATCCTGGTCCAGCCCCTCAAGCCATCACACAGGTGCTTTCTCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 72 bp GAATTCAGGCTGACACAAACCCCAGTCCAGTCTGTGTaGGGCATTCCGCTTGCTTCTCTGCTCCACGCGACA +
Preference number: 6 (lower is better)
Translates to: EFRLTQTPVQSV*GIPLASLLHAT
Trigger: TGTCGCGTGGAGCAGAGAAGCAAGCGGAATGCCCAACACAGACTGGACTGGGGTTTGTGTCAGCCTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp CACACGCCCAGGCCCAGCCTCTCTCTTGGCATATGCTaGAGGGTTTTGAATCCGTGTTCTAGTTTGACCTGC +
Preference number: 6 (lower is better)
Translates to: HTPRPSLSLGIC*RVLNPCSSLTC
Trigger: GCAGGTCAAACTAGAACACGGATTCAAAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGCCTGGGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316157.8
ENST00000448368.5
CDS TCA 72 bp GTTAATTTGCCCAAGGCCAGGAAGCAAAGGACGGAGTaGAACTTACTCCCTCCTTACTCCAGCCAGCGACCC +
Preference number: 6 (lower is better)
Translates to: VNLPKARKQRTE*NLLPPYSSQRP
Trigger: GGGTCGCTGGCTGGAGTAAGGAGGGAGTAAGTTTCACTCCGTCCTTTGCTTCCTGGCCTTGGGCAAATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 72 bp AGAAGGAGGCTCTTTACTCGTTCTCTGACAAATCTCTaGGTAGCTGGGCTTTCGCAATTCCGTGGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: RRRLFTRSLTNL*VAGLSQFRGGS
Trigger: GGAGCCGCCACGGAATTGCGAAAGCCCAGCTACGCAGAGATTTGTCAGAGAACGAGTAAAGAGCCTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000609318.5
ENST00000614908.4
CDS GCA 72 bp GTCTCCTCCAGCATTCCTTGTATGGAATTCCACATCTaGAAGCCCATGGAGGCATCCCTCCCATCTTCGTGG +
Preference number: 6 (lower is better)
Translates to: VSSSIPCMEFHI*KPMEASLPSSW
Trigger: CCACGAAGATGGGAGGGATGCCTCCATGGGCTTGCAGATGTGGAATTCCATACAAGGAATGCTGGAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp GCTCTTTACTCGTTCTCTGACAAATCTCTGCGTAGCTaGGCTTTCGCAATTCCGTGGCGGCTCCGTTCACCT +
Preference number: 6 (lower is better)
Translates to: ALYSFSDKSLRS*AFAIPWRLRSP
Trigger: AGGTGAACGGAGCCGCCACGGAATTGCGAAAGCCCAGCTACGCAGAGATTTGTCAGAGAACGAGTAAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000609318.5
ENST00000614908.4
CDS CAA 72 bp CACAAACCCCAGTCCAGTCTGTGTTGGGCATTCCGCTaGCTTCTCTGCTCCACGCGACAGGTGCCTAATTTT +
Preference number: 6 (lower is better)
Translates to: HKPQSSLCWAFR*LLCSTRQVPNF
Trigger: AAAATTAGGCACCTGTCGCGTGGAGCAGAGAAGCAAGCGGAATGCCCAACACAGACTGGACTGGGGTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp CATCCCCAAACAACACCGTCCTCTGACACCGGTAGCTaGGGAGTGTTTTCTGACTCAAAGGTGGGATGGAAC +
Preference number: 6 (lower is better)
Translates to: HPQTTPSSDTGS*GVFSDSKVGWN
Trigger: GTTCCATCCCACCTTTGAGTCAGAAAACACTCCTCAGCTACCGGTGTCAGAGGACGGTGTTGTTTGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476529.5
ENST00000481118.1
CDS GCA 72 bp ACCTTAGTTGCTGGTACGAACTGTCCGTCTCTATCATaGCATCCCCAAACAACACCGTCCTCTGACACCGGT +
Preference number: 6 (lower is better)
Translates to: TLVAGTNCPSLS*HPQTTPSSDTG
Trigger: ACCGGTGTCAGAGGACGGTGTTGTTTGGGGATGGCATGATAGAGACGGACAGTTCGTACCAGCAACTAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476529.5
CDS GCA 72 bp CAGTCCAGTCTGTGTTGGGCATTCCGCTTGCTTCTCTaGTCCACGCGACAGGTGCCTAATTTTAGCTTAGCT +
Preference number: 6 (lower is better)
Translates to: QSSLCWAFRLLL*STRQVPNFSLA
Trigger: AGCTAAGCTAAAATTAGGCACCTGTCGCGTGGAGCAGAGAAGCAAGCGGAATGCCCAACACAGACTGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp ACAAACCCCAGTCCAGTCTGTGTTGGGCATTCCGCTTaGTTCTCTGCTCCACGCGACAGGTGCCTAATTTTA +
Preference number: 6 (lower is better)
Translates to: TNPSPVCVGHSA*FSAPRDRCLIL
Trigger: TAAAATTAGGCACCTGTCGCGTGGAGCAGAGAAGCAAGCGGAATGCCCAACACAGACTGGACTGGGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 72 bp TGGACCAGGATTTGTCCAGGTCTCCTCCAGCATTCCTaGTATGGAATTCCACATCTGCAAGCCCATGGAGGC +
Preference number: 6 (lower is better)
Translates to: WTRICPGLLQHS*YGIPHLQAHGG
Trigger: GCCTCCATGGGCTTGCAGATGTGGAATTCCATACAAGGAATGCTGGAGGAGACCTGGACAAATCCTGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 90 bp ATCAAGCTAGATAGCCTGTTTTCAAACAAGTCCTCTGTCTTCAAATaGCCGGCAGCTCCAGGTAATGGAGGGAAGCTGGACAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: IKLDSLFSNKSSVFK*PAAPGNGGKLDSPS
Trigger: GCTGGGGCTGTCCAGCTTCCCTCCATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGGACTTGTTTGAAAACAGGCTATCTAGCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
ENST00000609318.5
CDS TCA 72 bp CAGCACGGCACGGCACAACACCACATGCATATCTGCTaGGTGTCGAATCCTAACACAGTCCAACACAACTCA +
Preference number: 6 (lower is better)
Translates to: QHGTAQHHMHIC*VSNPNTVQHNS
Trigger: TGAGTTGTGTTGGACTGTGTTAGGATTCGACACTCAGCAGATATGCATGTGGTGTTGTGCCGTGCCGTGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS TCA 72 bp GCAGGCAACAACTGCCCAGATGTGGGAGTTACAAAATaGCATCACCCACAGATGGGACTTGACTTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: AGNNCPDVGVTK*HHPQMGLDLEG
Trigger: GCCTTCCAAGTCAAGTCCCATCTGTGGGTGATGTCATTTTGTAACTCCCACATCTGGGCAGTTGTTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp GCTGGCAGTCATTTTGCGAGTACGCAGTTCCTCGGCTaGAGGACACATGGCACAGAAAGGGGAAATGAGTTT +
Preference number: 6 (lower is better)
Translates to: AGSHFASTQFLG*RTHGTERGNEF
Trigger: AAACTCATTTCCCCTTTCTGTGCCATGTGTCCTTCAGCCGAGGAACTGCGTACTCGCAAAATGACTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp AAGAGATGTGTCACAAAGGACACAGTGAGGCTAAGGTaGCATCCAAAGAGCTATCCACCCATGGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: KRCVTKDTVRLR*HPKSYPPMAAS
Trigger: GCTGGCAGCCATGGGTGGATAGCTCTTTGGATGTCACCTTAGCCTCACTGTGTCCTTTGTGACACATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp GGAGACCACTACAGGAAGGGTGTTCACGCTTGCGTCTaGACTGAGGGTCCTTTCTTTGGATGGTCCTATTAT +
Preference number: 6 (lower is better)
Translates to: GDHYRKGVHACV*TEGPFFGWSYY
Trigger: ATAATAGGACCATCCAAAGAAAGGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316157.8
ENST00000440895.2
ENST00000448368.5
ENST00000608970.1
ENST00000609318.5
CDS CCA 72 bp AACCTTAGCGTCCTGATCAGAAGTCATGGGCTCCACTaGGAGAAGTGTAATGCTAACCTCAGGATGCTTGCC +
Preference number: 6 (lower is better)
Translates to: NLSVLIRSHGLH*EKCNANLRMLA
Trigger: GGCAAGCATCCTGAGGTTAGCATTACACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGGACGCTAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406525.6
CDS CCA 72 bp GCTGCACTCAGGCTCACTTATGCCATCTCTCAGCCATaGACTGATCTCGCAGATGGCAAACAAAGTATACCC +
Preference number: 6 (lower is better)
Translates to: AALRLTYAISQP*TDLADGKQSIP
Trigger: GGGTATACTTTGTTTGCCATCTGCGAGATCAGTCCATGGCTGAGAGATGGCATAAGTGAGCCTGAGTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412411.1
CDS CCA 72 bp AACCTTAGCGTCCTGATCAGAAGTCATGGGCTCCACTaGGAGAAGTGTAATGCTAACCTCAGGATGCTGCTC +
Preference number: 6 (lower is better)
Translates to: NLSVLIRSHGLH*EKCNANLRMLL
Trigger: GAGCAGCATCCTGAGGTTAGCATTACACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGGACGCTAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412411.1
CDS CAA 72 bp GTATCTTTTGTGATGAGAAAGCACCTGTGTGATGGCTaGAGGGGCTGGACCAGGATTTGTCCAGGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: VSFVMRKHLCDG*RGWTRICPGLL
Trigger: GAGGAGACCTGGACAAATCCTGGTCCAGCCCCTCAAGCCATCACACAGGTGCTTTCTCATCACAAAAGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 90 bp ACAGAGATTGTATCTTTTGTGATGAGAAAGCACCTGTGTGATGGCTaGAGGGGCTGGACCAGGATTTGTCCAGGTCTCCTCCAGCATTCC +
Preference number: 6 (lower is better)
Translates to: TEIVSFVMRKHLCDG*RGWTRICPGLLQHS
Trigger: GGAATGCTGGAGGAGACCTGGACAAATCCTGGTCCAGCCCCTCAAGCCATCACACAGGTGCTTTCTCATCACAAAAGATACAATCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp TTAAGTACTTCTCGGGGGTCTTCCTGGCTGTCTGGTTaGGACTCATTTCCTCCTGTCTCGCTATTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: LSTSRGSSWLSG*DSFPPVSLFSG
Trigger: GCCTGAAAATAGCGAGACAGGAGGAAATGAGTCTCAACCAGACAGCCAGGAAGACCCCCGAGAAGTACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CCA 72 bp AACCTTAGCGTCCTGATCAGAAGTCATGGGCTCCACTaGGAGAAGTGTAATGCTAACCTCAGGATGCTGTCA +
Preference number: 6 (lower is better)
Translates to: NLSVLIRSHGLH*EKCNANLRMLS
Trigger: TGACAGCATCCTGAGGTTAGCATTACACTTCTCCCAGTGGAGCCCATGACTTCTGATCAGGACGCTAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316157.8
ENST00000476529.5
ENST00000481118.1
CDS CAA 72 bp ACTTCCACAATCAAGTCCACATCAGTGCTGAGCTTCTaGATGTGGTCGAGGTTAGCCACCGTTGTGATTGGC +
Preference number: 6 (lower is better)
Translates to: TSTIKSTSVLSF*MWSRLATVVIG
Trigger: GCCAATCACAACGGTGGCTAACCTCGACCACATCAAGAAGCTCAGCACTGATGTGGACTTGATTGTGGAAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CAA 72 bp GATCTATCAACCCGCTTTAACAAGCTGGCAGTCATTTaGCGAGTACGCAGTTCCTCGGCTGAAGGACACATG +
Preference number: 6 (lower is better)
Translates to: DLSTRFNKLAVI*RVRSSSAEGHM
Trigger: CATGTGTCCTTCAGCCGAGGAACTGCGTACTCGCAAAATGACTGCCAGCTTGTTAAAGCGGGTTGATAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 90 bp GATCTTAGCACTTCCACAATCAAGTCCACATCAGTGCTGAGCTTCTaGATGTGGTCGAGGTTAGCCACCGTTGTGATTGGCACATACTGG +
Preference number: 6 (lower is better)
Translates to: DLSTSTIKSTSVLSF*MWSRLATVVIGTYW
Trigger: CCAGTATGTGCCAATCACAACGGTGGCTAACCTCGACCACATCAAGAAGCTCAGCACTGATGTGGACTTGATTGTGGAAGTGCTAAGATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CAA 90 bp CGAGGAGGATACTGTCTGAGAGAAGTCAGAGGAGACGCCGCAGGCTaGAACGCTGGAGACGTAAACCCATTTATAAATCCAGTATTTGGA +
Preference number: 6 (lower is better)
Translates to: RGGYCLREVRGDAAG*NAGDVNPFINPVFG
Trigger: TCCAAATACTGGATTTATAAATGGGTTTACGTCTCCAGCGTTCAAGCCTGCGGCGTCTCCTCTGACTTCTCTCAGACAGTATCCTCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS TCA 72 bp GGCCACAAGCCGAAGCTTCAAAGCAGGTCACAGTCATaGACACATGCATCAGGAATGCAAGGCAAAACAGAA +
Preference number: 6 (lower is better)
Translates to: GHKPKLQSRSQS*THASGMQGKTE
Trigger: TTCTGTTTTGCCTTGCATTCCTGATGCATGTGTTCATGACTGTGACCTGCTTTGAAGCTTCGGCTTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp GTGAGGAAACTGAGGCCCAATACCTCTAAGTTAATTTaGCCAAGGCCAGGAAGCAAAGGACGGAGTGAAACT +
Preference number: 6 (lower is better)
Translates to: VRKLRPNTSKLI*PRPGSKGRSET
Trigger: AGTTTCACTCCGTCCTTTGCTTCCTGGCCTTGGGCAAATTAACTTAGAGGTATTGGGCCTCAGTTTCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469487.1
CDS GCA 72 bp TGTGCAGCACATCGCTATTTCCAAAACCTCTACAGTTaGTTCCTCCTAGGCCAGCCAGGGTGTCAGTTATTA +
Preference number: 6 (lower is better)
Translates to: CAAHRYFQNLYS*FLLGQPGCQLL
Trigger: TAATAACTGACACCCTGGCTGGCCTAGGAGGAAGCAACTGTAGAGGTTTTGGAAATAGCGATGTGCTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp GCCGAAGCTTCAAAGCAGGTCACAGTCATGAACACATaGATCAGGAATGCAAGGCAAAACAGAACGGAAGAG +
Preference number: 6 (lower is better)
Translates to: AEASKQVTVMNT*IRNARQNRTEE
Trigger: CTCTTCCGTTCTGTTTTGCCTTGCATTCCTGATGCATGTGTTCATGACTGTGACCTGCTTTGAAGCTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp ACAATCAAGTCCACATCAGTGCTGAGCTTCTTGATGTaGTCGAGGTTAGCCACCGTTGTGATTGGCACATAC +
Preference number: 6 (lower is better)
Translates to: TIKSTSVLSFLM*SRLATVVIGTY
Trigger: GTATGTGCCAATCACAACGGTGGCTAACCTCGACCACATCAAGAAGCTCAGCACTGATGTGGACTTGATTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CCA 72 bp GAGAGAAGTCAGAGGAGACGCCGCAGGCTTGAACGCTaGAGACGTAAACCCATTTATAAATCCAGTATTTGG +
Preference number: 6 (lower is better)
Translates to: ERSQRRRRRLER*RRKPIYKSSIW
Trigger: CCAAATACTGGATTTATAAATGGGTTTACGTCTCCAGCGTTCAAGCCTGCGGCGTCTCCTCTGACTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CAA 72 bp TACTGTCTGAGAGAAGTCAGAGGAGACGCCGCAGGCTaGAACGCTGGAGACGTAAACCCATTTATAAATCCA +
Preference number: 6 (lower is better)
Translates to: YCLREVRGDAAG*NAGDVNPFINP
Trigger: TGGATTTATAAATGGGTTTACGTCTCCAGCGTTCAAGCCTGCGGCGTCTCCTCTGACTTCTCTCAGACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CAA 90 bp TTGGAAAATGATCTATCAACCCGCTTTAACAAGCTGGCAGTCATTTaGCGAGTACGCAGTTCCTCGGCTGAAGGACACATGGCACAGAAA +
Preference number: 6 (lower is better)
Translates to: LENDLSTRFNKLAVI*RVRSSSAEGHMAQK
Trigger: TTTCTGTGCCATGTGTCCTTCAGCCGAGGAACTGCGTACTCGCAAAATGACTGCCAGCTTGTTAAAGCGGGTTGATAGATCATTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 90 bp GAAACAAGCAGATCATTCAACCCAGACAAGGGCTTCCTCACTCAATaGAAGGTTCTCCCAAGCAACTTCAACCATCTAGAGCAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: ETSRSFNPDKGFLTQ*KVLPSNFNHLEQSC
Trigger: ACAGCTCTGCTCTAGATGGTTGAAGTTGCTTGGGAGAACCTTCAATTGAGTGAGGAAGCCCTTGTCTGGGTTGAATGATCTGCTTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp CACGGCAGGCACAACAGTGCCCTGTGTTTAGATGCTTaGCTTGTTAGTCCAAATGGTCACAGGAATTCACTA +
Preference number: 6 (lower is better)
Translates to: HGRHNSALCLDA*LVSPNGHRNSL
Trigger: TAGTGAATTCCTGTGACCATTTGGACTAACAAGTCAAGCATCTAAACACAGGGCACTGTTGTGCCTGCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp TTTTACAGAAAAAGCGTCTGGACCTTTCTGAGGTCCTaGGAGCACGTACATAAGACGATGGGCGTATGCTCT +
Preference number: 6 (lower is better)
Translates to: FYRKSVWTFLRS*EHVHKTMGVCS
Trigger: AGAGCATACGCCCATCGTCTTATGTACGTGCTCTCAGGACCTCAGAAAGGTCCAGACGCTTTTTCTGTAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp GTGAAAGCAGGTCAAAGGATGAAAATGAATTCAGGCTaGCACAAACCCCAGTCCAGTCTGTGTTGGGCATTC +
Preference number: 6 (lower is better)
Translates to: VKAGQRMKMNSG*HKPQSSLCWAF
Trigger: GAATGCCCAACACAGACTGGACTGGGGTTTGTGTCAGCCTGAATTCATTTTCATCCTTTGACCTGCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp ACAATGAGCTACTCTGACCAGGAAGCAAAGATCTCATaGGATCCACCTAACTGGAAAGTGCCAATGTTTCTC +
Preference number: 6 (lower is better)
Translates to: TMSYSDQEAKIS*DPPNWKVPMFL
Trigger: GAGAAACATTGGCACTTTCCAGTTAGGTGGATCCCATGAGATCTTTGCTTCCTGGTCAGAGTAGCTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CCA 72 bp TATTGGAAAATGATCTATCAACCCGCTTTAACAAGCTaGCAGTCATTTTGCGAGTACGCAGTTCCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: YWKMIYQPALTS*QSFCEYAVPRL
Trigger: CAGCCGAGGAACTGCGTACTCGCAAAATGACTGCCAGCTTGTTAAAGCGGGTTGATAGATCATTTTCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 72 bp AGATCATTCAACCCAGACAAGGGCTTCCTCACTCAATaGAAGGTTCTCCCAAGCAACTTCAACCATCTAGAG +
Preference number: 6 (lower is better)
Translates to: RSFNPDKGFLTQ*KVLPSNFNHLE
Trigger: CTCTAGATGGTTGAAGTTGCTTGGGAGAACCTTCAATTGAGTGAGGAAGCCCTTGTCTGGGTTGAATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS GCA 72 bp AGAAGGAGGCTCTTTACTCGTTCTCTGACAAATCTCTaGGTAGCTGGGCTTTCGCAATTCCAAATTAGATGT +
Preference number: 6 (lower is better)
Translates to: RRRLFTRSLTNL*VAGLSQFQIRC
Trigger: ACATCTAATTTGGAATTGCGAAAGCCCAGCTACGCAGAGATTTGTCAGAGAACGAGTAAAGAGCCTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448368.5
CDS CCA 72 bp TGGTCGAGGTTAGCCACCGTTGTGATTGGCACATACTaGTCACTATCCATCTGTGATATAAGATACATGTCA +
Preference number: 6 (lower is better)
Translates to: WSRLATVVIGTY*SLSICDIRYMS
Trigger: TGACATGTATCTTATATCACAGATGGATAGTGACCAGTATGTGCCAATCACAACGGTGGCTAACCTCGACCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CAA 72 bp TGGGAGTTACAAAATGACATCACCCACAGATGGGACTaGACTTGGAAGGCAGTGTTAAAATCCTCTAGGATC +
Preference number: 6 (lower is better)
Translates to: WELQNDITHRWD*TWKAVLKSSRI
Trigger: GATCCTAGAGGATTTTAACACTGCCTTCCAAGTCAAGTCCCATCTGTGGGTGATGTCATTTTGTAACTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS CAA 90 bp GGAGAAACAGGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATaGACCAACACTGAAATAAAAGGACTACATGGTGGTCTGAGAAAG +
Preference number: 6 (lower is better)
Translates to: GETGAGVLLLLKKPL*TNTEIKGLHGGLRK
Trigger: CTTTCTCAGACCACCATGTAGTCCTTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCCTGTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440895.2
ENST00000608970.1
CDS TCA 72 bp CGTTGTGATTGGCACATACTGGTCACTATCCATCTGTaGTATAAGATACATGTCACTAGCAAGGTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: RCDWHILVTIHL*YKIHVTSKVLP
Trigger: AGGGAGAACCTTGCTAGTGACATGTATCTTATATCACAGATGGATAGTGACCAGTATGTGCCAATCACAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316157.8
CDS CAA 72 bp GGAGCTGGGGTCTTGTTACTACTCAAGAAACCTCTATaGACCAACACTGAAATAAAAGGACTACATGGTGGT +
Preference number: 6 (lower is better)
Translates to: GAGVLLLLKKPL*TNTEIKGLHGG
Trigger: ACCACCATGTAGTCCTTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAGACCCCAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440895.2
ENST00000608970.1
CDS TCA 72 bp ACTAGACTAAGCCGACCTCATGAAAGGCACAATTTCTaGGTTCTAAACAGAGATTGTATCTTTTGTGATGAG +
Preference number: 6 (lower is better)
Translates to: TRLSRPHERHNF*VLNRDCIFCDE
Trigger: CTCATCACAAAAGATACAATCTCTGTTTAGAACTCAGAAATTGTGCCTTTCATGAGGTCGGCTTAGTCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609318.5
CDS TCA 72 bp CTTGTTACTACTCAAGAAACCTCTATTGACCAACACTaGAATAAAAGGACTACATGGTGGTCTGAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LVTTQETSIDQH*NKRTTWWSEKE
Trigger: TTCTTTCTCAGACCACCATGTAGTCCTTTTATTTCAGTGTTGGTCAATAGAGGTTTCTTGAGTAGTAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440895.2
ENST00000608970.1