Pregenerated sensors for LARP4 (Homo sapiens)
Ensembl gene IDs: ENSG00000161813Ensembl transcript IDs: ENST00000293618.12, ENST00000398473.7, ENST00000429001.7, ENST00000517559.5, ENST00000548993.5, ENST00000552445.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCGGAAGTTTAAACCTCTaGAATCCATTTGACCTATGC | + |
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Preference number: 2 (lower is better) Translates to: QYHLYLLLASNRSRKCQVGSLNL*NPFDLC Trigger: GCATAGGTCAAATGGATTTCAGAGGTTTAAACTTCC...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| 3UTR-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCACTCTTCCCTATACATaGCATCAAATGGGAACTATT | + |
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Preference number: 2 (lower is better) Translates to: QYHLYLLLASNRSRKCQVTLPYT*HQMGTI Trigger: AATAGTTCCCATTTGATGGCATGTATAGGGAAGAGT...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| 3UTR CCA 72 bp | CACACTCTCTCACTCTTCCCTATACATGCCATCAAATaGGAACTATTAGATGTAATGAGGCAAATTAAATTA | + |
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Preference number: 3 (lower is better) Translates to: HTLSLFPIHAIK*ELLDVMRQIKL Trigger: TAATTTAATTTGCCTCATTACATCTAATAGTTCCCATTTGATGGCATGTATAGGGAAGAGTGAGAGAGTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR TCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCTCAGCCGCTGCGGCCTaGCCCGCCCAGTCCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVSAAAA*PAQSHL Trigger: GAGGTGGGACTGGGCGGGTCAGGCCGCAGCGGCTGA...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293618.12 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCCCTGCCGTCAGCCGCTaGGGCCTGACCCGCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVPAVSR*GLTRPV Trigger: GACTGGGCGGGTCAGGCCGCAGCGGCTGACGGCAGG...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293618.12 |
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| CDS-3UTR CCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCCCCTCCACCCGGCAGTaGACCCGGCTCCTCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVPSTRQ*TRLLPC Trigger: GCAGGGGAGGAGCCGGGTCCACTGCCGGGTGGAGGG...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000293618.12 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCGACACACACTCGCCTTaGCCCTCCACCCGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVDTHSP*PSTRQW Trigger: CCACTGCCGGGTGGAGGGGCAAGGCGAGTGTGTGTC...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR TCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCCAGTCCCACCTCCCTTaGAACAACAACTGCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVQSHLP*NNNCFR Trigger: CCGGAAGCAGTTGTTGTTTCAAGGGAGGTGGGACTG...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293618.12 |
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| CDS-3UTR CCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCTTCCTGCTGCTCCCCTaGGGATTATATTGCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVFLLLP*GLYCLG Trigger: TCCGAGGCAATATAATCCCCAGGGGAGCAGCAGGAA...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR TCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCTCAGCTGTTGAAGGATaGGGTCTTGAGATCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVSAVEG*GLEILS Trigger: TGACAGGATCTCAAGACCTCATCCTTCAACAGCTGA...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCACCAGTTCCTTTAGATaGTACCTGCTCCACGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVTSSFR*YLLHEK Trigger: CTTTTCGTGGAGCAGGTAGCATCTAAAGGAACTGGT...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCGATGGCTTTTATCCTTaGCATAATTGGCTTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVDGFYP*HNWLAL Trigger: CAGGGCAAGCCAATTATGGCAAGGATAAAAGCCATC...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCCCCTGGGGATTATATTaGCTCGGAAGCCAGAATAAT | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVPWGLY*LGSQNN Trigger: ATTATTCTGGCTTCCGAGGCAATATAATCCCCAGGG...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCGTTACTGTGGGGTTATaGCGTTCAGCTGGAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVVTVGL*RSAGKF Trigger: AAACTTTCCAGCTGAACGGCATAACCCCACAGTAAC...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398473.7 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCCCAGTTGCTATTGTGTaGAAACTCACAGCTTATCAC | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVPVAIV*KLTAYH Trigger: GTGATAAGCTGTGAGTTTGCACACAATAGCAACTGG...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR TCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCAGATCCTTTTCTTGCTaGGTTGTGCTTAATGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVRSFSC*VVLNAV Trigger: TACTGCATTAAGCACAACTCAGCAAGAAAAGGATCT...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR TCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCAGCTGGAAAGTTTCTTaGACTATATCTGTTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVSWKVS*TISVQL Trigger: CAGTTGAACAGATATAGTTCAAGAAACTTTCCAGCT...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398473.7 |
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| CDS-3UTR CCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCCATCAACTTGTACCATaGGAGAAGATCTTAACACTT | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVHQLVP*EKILTL Trigger: AAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATG...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR GCA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCAGCCACAGCTGTAGCTaGATTTATGTTATTATTACA | + |
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Preference number: 4 (lower is better) Translates to: QYHLYLLLASNRSRKCQVSHSCS*IYVIIT Trigger: TGTAATAATAACATAAATGCAGCTACAGCTGTGGCT...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS GCA 90 bp | TGTTGTGAGCGCGCAGAGGGAAGCTGCAGGCCTGCTCGGCCCAGGTaGTGTGTCAGCCTATCTGCCGGTTCCGCGGCGTGTACGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: CCERAEGSCRPARPR*CVSLSAGSAACTAR Trigger: CCGGGCCGTACACGCCGCGGAACCGGCAGATAGGCTGACACAGCACCTGGGCCGAGCAGGCCTGCAGCTTCCCTCTGCGCGCTCACAACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517559.5 |
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| CDS GCA 90 bp | TGCTCCCATAGCTTCCTAGAGTGTTGTGAGCGCGCAGAGGGAAGCTaGAGGCCTGCTCGGCCCAGGTGCTGTGTCAGCCTATCTGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: CSHSFLECCERAEGS*RPARPRCCVSLSAG Trigger: ACCGGCAGATAGGCTGACACAGCACCTGGGCCGAGCAGGCCTGCAGCTTCCCTCTGCGCGCTCACAACACTCTAGGAAGCTATGGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517559.5 |
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| CDS TCA 90 bp | GCTACCTGCTTAGCCTCCCATCCCAAGTGCTGGGATTATAGGTGTTaGGCCACGGCACCCGGTCATCTGAAAGGTGCAGTAGACGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ATCLASHPKCWDYRC*ATAPGHLKGAVDAL Trigger: CAGAGCGTCTACTGCACCTTTCAGATGACCGGGTGCCGTGGCTCAACACCTATAATCCCAGCACTTGGGATGGGAGGCTAAGCAGGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548993.5 ENST00000552445.1 |
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| CDS CCA 90 bp | AAAGGTGCAGTAGACGCTCTGATTCTCACTGTAGTCCCAGCCACTTaGAGAGCTGAGACAGGAGGAATGCTTGAACCTGGGAGGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: KGAVDALILTVVPAT*RAETGGMLEPGRWR Trigger: CCTCCACCTCCCAGGTTCAAGCATTCCTCCTGTCTCAGCTCTCCAAGTGGCTGGGACTACAGTGAGAATCAGAGCGTCTACTGCACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552445.1 |
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| CDS-3UTR CAA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCGGACACACACTCGCCTaGCCCCTCCACCCGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: QYHLYLLLASNRSRKCQVGHTLA*PLHPAV Trigger: CACTGCCGGGTGGAGGGGCAAGGCGAGTGTGTGTCC...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR CAA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCCTTCTGAAGGTAAGTTaGCTCCTGATGCCCAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: QYHLYLLLASNRSRKCQVLLKVS*LLMPSY Trigger: GTAACTGGGCATCAGGAGCAAACTTACCTTCAGAAG...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398473.7 |
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| CDS-3UTR CAA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCTTGAAGGATGAGGTCTaGAGATCCTGTCATCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QYHLYLLLASNRSRKCQVLKDEV*RSCHLL Trigger: GAGAAGATGACAGGATCTCAAGACCTCATCCTTCAA...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR CAA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCGTAGAAACTGCTGAATaGCTTTCTCCGGAAACATCA | + |
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Preference number: 5 (lower is better) Translates to: QYHLYLLLASNRSRKCQVVETAE*LSPETS Trigger: TGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTAC...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS-3UTR CAA 90 bp | CAATATCATTTATACCTACTTTTAGCCTCCAACAGATCAAGGAAATGTCAAGTCGACTTAACCCCAGTGTaGTTCAACTGTGTCAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: QYHLYLLLASNRSRKCQVDLTPV*FNCVKV Trigger: TACTTTGACACAGTTGAACAACACTGGGGTTAAGTC...GACTTGACATTTCCTTGATCTGTTGGAGGCTAAAAGTAGGTATAAATGATATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000398473.7 |
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| CDS CCA 72 bp | AAGGACACACACTCGCCTTGCCCCTCCACCCGGCAGTaGACCCGGCTCCTCCCCTGCCGTCAGCCGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: KDTHSPCPSTRQ*TRLLPCRQPLR Trigger: CCGCAGCGGCTGACGGCAGGGGAGGAGCCGGGTCCACTGCCGGGTGGAGGGGCAAGGCGAGTGTGTGTCCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293618.12 ENST00000429001.7 |
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| CDS GCA 72 bp | CGCGCAGAGGGAAGCTGCAGGCCTGCTCGGCCCAGGTaGTGTGTCAGCCTATCTGCCGGTTCCGCGGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: RAEGSCRPARPR*CVSLSAGSAAC Trigger: ACACGCCGCGGAACCGGCAGATAGGCTGACACAGCACCTGGGCCGAGCAGGCCTGCAGCTTCCCTCTGCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517559.5 |
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| CDS GCA 72 bp | AGCTTCCTAGAGTGTTGTGAGCGCGCAGAGGGAAGCTaGAGGCCTGCTCGGCCCAGGTGCTGTGTCAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: SFLECCERAEGS*RPARPRCCVSL Trigger: TAGGCTGACACAGCACCTGGGCCGAGCAGGCCTGCAGCTTCCCTCTGCGCGCTCACAACACTCTAGGAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517559.5 |
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| CDS TCA 72 bp | TTAGCCTCCCATCCCAAGTGCTGGGATTATAGGTGTTaGGCCACGGCACCCGGTCATCTGAAAGGTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LASHPKCWDYRC*ATAPGHLKGAV Trigger: TACTGCACCTTTCAGATGACCGGGTGCCGTGGCTCAACACCTATAATCCCAGCACTTGGGATGGGAGGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548993.5 ENST00000552445.1 |
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| CDS CCA 72 bp | GTAGACGCTCTGATTCTCACTGTAGTCCCAGCCACTTaGAGAGCTGAGACAGGAGGAATGCTTGAACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VDALILTVVPAT*RAETGGMLEPG Trigger: CCCAGGTTCAAGCATTCCTCCTGTCTCAGCTCTCCAAGTGGCTGGGACTACAGTGAGAATCAGAGCGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552445.1 |
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