RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LARP1B (Homo sapiens)

Ensembl gene IDs: ENSG00000138709

Ensembl transcript IDs: ENST00000326639.11, ENST00000394288.7, ENST00000432347.6, ENST00000503725.1, ENST00000507259.5, ENST00000507377.1, ENST00000508648.5, ENST00000508819.5, ENST00000512292.5, ENST00000648358.1, ENST00000649983.1, ENST00000650359.1

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTTGTAAGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTaGGGCGGCGACTGGAGTGTCACTGAGCCCAGGAGAGGTCACAGG +
Preference number: 1 (lower is better)
Translates to: VCKMQVKLGSGIDVG*GGDWSVTEPRRGHR
Trigger: CCTGTGACCTCTCCTGGGCTCAGTGACACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCTTACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR GCA 90 bp GCCTCCCCTGCGGGCTCTGCCTGTGGCCTAGATAAACCAGCTTTTTaGCTTCAGTGGTGGGCAGACACCAATGTAATTTGCTATTTCCAC +
Preference number: 1 (lower is better)
Translates to: ASPAGSACGLDKPAF*LQWWADTNVICYFH
Trigger: GTGGAAATAGCAAATTACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGCTGGTTTATCTAGGCCACAGGCAGAGCCCGCAGGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CCA 90 bp ATATGGTTTGTAAGATGCAAGTCAAACTTGGAAGTGGCATTGATGTaGGGTGGGGCGGCGACTGGAGTGTCACTGAGCCCAGGAGAGGTC +
Preference number: 1 (lower is better)
Translates to: IWFVRCKSNLEVALM*GGAATGVSLSPGEV
Trigger: GACCTCTCCTGGGCTCAGTGACACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCTTACAAACCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CCA 90 bp AAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGCAAAGGTaGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAG +
Preference number: 1 (lower is better)
Translates to: KKSSSPLVCLSLSQR*LSPLQCWPNFLHQE
Trigger: CTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CCA 90 bp GCGGGCTCTGCCTGTGGCCTAGATAAACCAGCTTTTTGCCTTCAGTaGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAA +
Preference number: 1 (lower is better)
Translates to: AGSACGLDKPAFCLQ*WADTNVICYFHNPQ
Trigger: TTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGCTGGTTTATCTAGGCCACAGGCAGAGCCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR TCA 90 bp GATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATaGCACTCTAGAGGGGGATTTGTGCTATGCCTTGTTTTTCTCTTT +
Preference number: 1 (lower is better)
Translates to: DVPGPRSLESITQPT*HSRGGFVLCLVFLF
Trigger: AAAGAGAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CCA 90 bp GTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTTGAA +
Preference number: 1 (lower is better)
Translates to: VCLSLSQRWLSPLQC*PNFLHQEVGIDILE
Trigger: TTCAAGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CCA 90 bp GGCTCTGCCTGTGGCCTAGATAAACCAGCTTTTTGCCTTCAGTGGTaGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTG +
Preference number: 1 (lower is better)
Translates to: GSACGLDKPAFCLQW*ADTNVICYFHNPQL
Trigger: CAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGCTGGTTTATCTAGGCCACAGGCAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR GCA 90 bp AAACCAGCTTTTTGCCTTCAGTGGTGGGCAGACACCAATGTAATTTaGTATTTCCACAATCCTCAATTGGAATGTCTATTGGAGACAGGT +
Preference number: 1 (lower is better)
Translates to: KPAFCLQWWADTNVI*YFHNPQLECLLETG
Trigger: ACCTGTCTCCAATAGACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGCTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR GCA 90 bp TGTTCCAGTATTTATAAAGGCATTTCAGTGAGTCACCTATTCCACTaGATATTCCGATCAAATGACATCCAAGAGCTTCAGAAGATCATC +
Preference number: 1 (lower is better)
Translates to: CSSIYKGISVSHLFH*IFRSNDIQELQKII
Trigger: GATGATCTTCTGAAGCTCTTGGATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
3UTR TCA 90 bp ATTTTTGCAGCAGGATTTGTTCCAGTATTTATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCATATTCCGATCAAATGACATCCAAG +
Preference number: 1 (lower is better)
Translates to: IFAAGFVPVFIKAFQ*VTYSTAYSDQMTSK
Trigger: CTTGGATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGAACAAATCCTGCTGCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR TCA 90 bp ATTAGTATGCATAAATGGTTAATGGACAGGCATTACCAACTTGACTaGCCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTAT +
Preference number: 1 (lower is better)
Translates to: ISMHKWLMDRHYQLD*PILPTLQRKYMLFY
Trigger: ATAAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTGTCCATTAACCATTTATGCATACTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000432347.6
3UTR-3UTR CCA 90 bp AGCTGGCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGGCATTGATGTGGGGTaGGGCGGCGACTGGAGTGTC +
Preference number: 2 (lower is better)
Translates to: SWLKIKIIWWSEKLPASPGIDVG*GGDWSV
Trigger: GACACTCCAGTCGCCGCCCCACCCCACATCAATGCC...AGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CCA 90 bp AGCTGGCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGACAGAGGATGTTCCTaGCCCACGGTCTCTGGAATC +
Preference number: 2 (lower is better)
Translates to: SWLKIKIIWWSEKLPASPDRGCS*PTVSGI
Trigger: GATTCCAGAGACCGTGGGCCAGGAACATCCTCTGTC...AGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CCA 90 bp AGCTGGCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTCTGGCCCACGGTCTCTaGAATCCATTACCCAACCAA +
Preference number: 2 (lower is better)
Translates to: SWLKIKIIWWSEKLPASPLAHGL*NPLPNQ
Trigger: TTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAG...AGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CAA 90 bp ACAGAAATATGGTTTGTAAGATGCAAGTCAAACTTGGAAGTGGCATaGATGTGGGGTGGGGCGGCGACTGGAGTGTCACTGAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: TEIWFVRCKSNLEVA*MWGGAATGVSLSPG
Trigger: TCCTGGGCTCAGTGACACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCTTACAAACCATATTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR TCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGGGTGTTCTTGTAGGATaGATTCTAGGAGATTCTGGA +
Preference number: 2 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGGVLVG*ILGDSG
Trigger: TCCAGAATCTCCTAGAATTCATCCTACAAGAACACC...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGTTTTGCCTTCAGTGGTaGGCAGACACCAATGTAATT +
Preference number: 2 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGFCLQW*ADTNVI
Trigger: AATTACATTGGTGTCTGCCCACCACTGAAGGCAAAA...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR TCA 90 bp GTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATGAACAGAAGACAGTCTaGTCGCTTTCATTTTTGCAG +
Preference number: 2 (lower is better)
Translates to: VVISTAVLAQLPPPRGGNEQKTV*SLSFLQ
Trigger: CTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTC...ATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp AGCTGGCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTATTACCCAACCAACATaGCACTCTAGAGGGGGATTT +
Preference number: 2 (lower is better)
Translates to: SWLKIKIIWWSEKLPASPITQPT*HSRGGF
Trigger: AAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAAT...AGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR TCA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTACTTGGAAGTGGCATTaGTGTGGGGTGGGGCGGCGA +
Preference number: 2 (lower is better)
Translates to: WWADTNVICYFHNPQLECTWKWH*CGVGRR
Trigger: TCGCCGCCCCACCCCACATCAATGCCACTTCCAAGT...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR GCA 90 bp AGGATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATGACACTAGGAGATTCTGGAACTaGTGTAGGCAACGAATGAAC +
Preference number: 2 (lower is better)
Translates to: RMFLAHGLWNPLPNQHDTRRFWN*CRQRMN
Trigger: GTTCATTCGTTGCCTACAGCAGTTCCAGAATCTCCT...AGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR TCA 90 bp GCCCATGCAGCCCAGGCCAATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTTCATCGATGCTTTGTTaGTGGGACGTCCTCTCATAC +
Preference number: 2 (lower is better)
Translates to: AHAAQANYTEIGSSYKKSSSMLC*WDVLSY
Trigger: GTATGAGAGGACGTCCCATCAACAAAGCATCGATGA...ACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATTGGCCTGGGCTGCATGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGAAAGAGGCAAGAAGAGTaGTCTCTAAAGCCACTGGCT +
Preference number: 2 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRKRQEE*SLKPLA
Trigger: AGCCAGTGGCTTTAGAGAGCACTCTTCTTGCCTCTT...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
3UTR-3UTR CCA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGTCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSSPLQC*PNFLHQ
Trigger: TTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGA...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp CCAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGGAGCCAGGTAAGCAATaGGCATATAAATTAAGCCTG +
Preference number: 2 (lower is better)
Translates to: PRRQWLQKAKSSTGDSRKEPGKQ*AYKLSL
Trigger: CAGGCTTAATTTATATGCTCATTGCTTACCTGGCTC...CTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
3UTR-3UTR GCA 90 bp ATTAACTTTCCCACCATGAATAAAAGCAGCCCATGCAGCCCAGGCCAATTACACAATAAAAGCAGCCCATaGAGCCCAGGCCAATTACAC +
Preference number: 2 (lower is better)
Translates to: INFPTMNKSSPCSPGQLHNKSSP*SPGQLH
Trigger: GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATT...GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATTCATGGTGGGAAAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGCAGATTCTCATATCCTaGTTAGGAACTAGATGTTTA +
Preference number: 2 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGQILIS*LGTRCL
Trigger: TAAACATCTAGTTCCTAAGCAGGATATGAGAATCTG...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CCA 90 bp GTCCATCATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAATCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: VHHRCFVDGTSSHTDVSKSPLQC*PNFLHQ
Trigger: TTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGA...TTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATGATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp GCCCATGCAGCCCAGGCCAATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCA +
Preference number: 2 (lower is better)
Translates to: AHAAQANYTEIGSSYKKSIKAFQ*VTYSTA
Trigger: TGCAGTGGAATAGGTGACTCACTGAAATGCCTTTAT...ACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATTGGCCTGGGCTGCATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp TCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCCAATGTACACTACACTaGAAGGCAAATCGAATAGCA +
Preference number: 2 (lower is better)
Translates to: SHYRKGGYLHCSVGPTSSQCTLH*KANRIA
Trigger: TGCTATTCGATTTGCCTTTCAGTGTAGTGTACATTG...GGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTCATCGATGCTTTGTTaGTGGGACGTCCTCTCATAC +
Preference number: 2 (lower is better)
Translates to: GITNLTDLSYLPCRESICSSMLC*WDVLSY
Trigger: GTATGAGAGGACGTCCCATCAACAAAGCATCGATGA...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp AAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGATCAAATGACATCGGTGGTTATCTCCACTaGAGTGTTGGCCCAACTTCC +
Preference number: 2 (lower is better)
Translates to: KGISVSHLFHCIFRSNDIGGYLH*SVGPTS
Trigger: GGAAGTTGGGCCAACACTGCAGTGGAGATAACCACC...GATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp AATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTGGTGGTTATCTCCACTaGAGTGTTGGCCCAACTTCC +
Preference number: 2 (lower is better)
Translates to: NYTEIGSSYKKSSSPLVCGGYLH*SVGPTS
Trigger: GGAAGTTGGGCCAACACTGCAGTGGAGATAACCACC...ACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGACTGGCTCATACAGCTaGGGTGAGAGCCAGGTAAGC +
Preference number: 2 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQTGSYS*GESQVS
Trigger: GCTTACCTGGCTCTCACCGCAGCTGTATGAGCCAGT...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512292.5
3UTR-3UTR CCA 90 bp AAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGATCAAATGACATCTCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: KGISVSHLFHCIFRSNDISPLQC*PNFLHQ
Trigger: TTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGA...GATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CCA 90 bp CCAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGATAGGAACCAGGATCTaGGATGAAATGCAAGAAGTT +
Preference number: 2 (lower is better)
Translates to: PRRQWLQKAKSSTGDSRKIGTRI*DEMQEV
Trigger: AACTTCTTGCATTTCATCCCAGATCCTGGTTCCTAT...CTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
3UTR-3UTR TCA 90 bp GGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGCAAGGGAATAGACATTCTTaGACAGAAGACAGTCTGATC +
Preference number: 2 (lower is better)
Translates to: GSSYKKSSSPLVCLSLSQGNRHS*TEDSLI
Trigger: GATCAGACTGTCTTCTGTTCAAGAATGTCTATTCCC...TTGCGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTGCTGTAGGCAACGAATaGACCATTGCTGCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: WWADTNVICYFHNPQLECAVGNE*TIAAEV
Trigger: AACTTCAGCAGCAATGGTTCATTCGTTGCCTACAGC...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR GCA 90 bp ATTAACTTTCCCACCATGAATAAAAGCAGCCCATGCAGCCCAGGCCAATTACACGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: INFPTMNKSSPCSPGQLHDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATTCATGGTGGGAAAGTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CAA 90 bp CTCTGGAATCCATTACCCAACCAACATGACACTCTAGAGGGGGATTaGTGCTATGCCTTGTTTTTCTCTTTCTTGGACTCTTTACATCAA +
Preference number: 2 (lower is better)
Translates to: LWNPLPNQHDTLEGD*CYALFFSFLDSLHQ
Trigger: TTGATGTAAAGAGTCCAAGAAAGAGAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAATGGATTCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR TCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTTCATCGATGCTTTGTTaGTGGGACGTCCTCTCATAC +
Preference number: 2 (lower is better)
Translates to: TNLTDLSYLPCRESICYFSSMLC*WDVLSY
Trigger: GTATGAGAGGACGTCCCATCAACAAAGCATCGATGA...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCGATCATCACCCTGACTaGAAAAAGTTTAAGCACACA +
Preference number: 2 (lower is better)
Translates to: GITNLTDLSYLPCRESICDHHPD*KKFKHT
Trigger: TGTGTGCTTAAACTTTTTTCAGTCAGGGTGATGATC...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
3UTR-3UTR GCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCAATAAAAGCAGCCCATaGAGCCCAGGCCAATTACAC +
Preference number: 2 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIINKSSP*SPGQLH
Trigger: GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATT...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATACTGTCCATCATCGATaGTTTGTTGATGGGACGTCC +
Preference number: 2 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHTVHHR*FVDGTS
Trigger: GGACGTCCCATCAACAAAGCATCGATGATGGACAGT...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCACTGTCCATCATCGATaGTTTGTTGATGGGACGTCC +
Preference number: 2 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIITVHHR*FVDGTS
Trigger: GGACGTCCCATCAACAAAGCATCGATGATGGACAGT...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CCA 90 bp TTTTATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAATCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: FYLTYPMPCEPNVHKLAKSPLQC*PNFLHQ
Trigger: TTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGA...TTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATAGAGTAGCAGTCCTCTaGTCTGTCTCTCATTATCGC +
Preference number: 2 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHRVAVL*SVSHYR
Trigger: GCGATAATGAGAGACAGACCAGAGGACTGCTACTCT...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATCAGGCATTACCAACTTaGCTGACCTATCTTACCTAC +
Preference number: 2 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHQALPT*LTYLTY
Trigger: GTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTG...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTCAGGCATTACCAACTTaGCTGACCTATCTTACCTAC +
Preference number: 2 (lower is better)
Translates to: TNLTDLSYLPCRESICYFQALPT*LTYLTY
Trigger: GTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTG...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp GTCCATCATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAAGTCACCTATTCCACTaGATATTCCGATCAAATGAC +
Preference number: 2 (lower is better)
Translates to: VHHRCFVDGTSSHTDVSKSHLFH*IFRSND
Trigger: GTCATTTGATCGGAATATGCAGTGGAATAGGTGACT...TTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATGATGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp AAATGCCTGTCCAAGTTGCTTACTGGGATTAGAAGCAGAAGGCTGACAAAGAAAGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: KCLSKLLTGIRSRRLTKKDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...TTTCTTTGTCAGCCTTCTGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CCA 90 bp TACATCCATAACTTCCTGCTAGTGGTGCGCCTTCTGAAGGTGAAGCATTTGAAGTGTTTTTCTCTTTCTTaGACTCTTTACATCAATGGC +
Preference number: 2 (lower is better)
Translates to: YIHNFLLVVRLLKVKHLKCFSLS*TLYING
Trigger: GCCATTGATGTAAAGAGTCCAAGAAAGAGAAAAACA...CTTCAAATGCTTCACCTTCAGAAGGCGCACCACTAGCAGGAAGTTATGGATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CAA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATaGGAATGTCTATTGGAGACAGGTCTTAACACAAGTAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: WWADTNVICYFHNPQ*ECLLETGLNTSRGK
Trigger: TTTTCCTCTACTTGTGTTAAGACCTGTCTCCAATAGACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCATTTCACCATTTCTTaGGACCACAGGACACAGGCA +
Preference number: 2 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFHFTIS*DHRTQA
Trigger: TGCCTGTGTCCTGTGGTCTCAAGAAATGGTGAAATG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
3UTR-3UTR TCA 90 bp TATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTCATTACCAACTTGACTaGCCTATCTTACCTACCCTG +
Preference number: 2 (lower is better)
Translates to: YLTYPMPCEPNVHKLAKTHYQLD*PILPTL
Trigger: CAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATG...AGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp TATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTCAGGCATTACCAACTTaGCTGACCTATCTTACCTAC +
Preference number: 2 (lower is better)
Translates to: YLTYPMPCEPNVHKLAKTQALPT*LTYLTY
Trigger: GTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTG...AGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CCA 90 bp TTTTCTGCTTTATTCATCTGGACACAAGTACATAACCCTGGAAACAGAAAACATAGAGTAGCAGTCCTCTaGTCTGTCTCTCATTATCGC +
Preference number: 2 (lower is better)
Translates to: FSALFIWTQVHNPGNRKHRVAVL*SVSHYR
Trigger: GCGATAATGAGAGACAGACCAGAGGACTGCTACTCT...ATGTTTTCTGTTTCCAGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp AGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCA +
Preference number: 2 (lower is better)
Translates to: RRQSDRFHFCSRICSSIYIKAFQ*VTYSTA
Trigger: TGCAGTGGAATAGGTGACTCACTGAAATGCCTTTAT...ATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTCAATGTACACTACACTaGAAGGCAAATCGAATAGCA +
Preference number: 2 (lower is better)
Translates to: TNLTDLSYLPCRESICYFQCTLH*KANRIA
Trigger: TGCTATTCGATTTGCCTTTCAGTGTAGTGTACATTG...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTCATATTCCGATCAAATaGCATCCAAGAGCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TNLTDLSYLPCRESICYFHIPIK*HPRASE
Trigger: TTCTGAAGCTCTTGGATGTCATTTGATCGGAATATG...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
3UTR-3UTR GCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATAGTCACCTATTCCACTaGATATTCCGATCAAATGAC +
Preference number: 2 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHSHLFH*IFRSND
Trigger: GTCATTTGATCGGAATATGCAGTGGAATAGGTGACT...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIIDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CCA 90 bp AAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGATCAAATGACATCTCTGCTTTATTCATCTaGACACAAGTACATAACCCT +
Preference number: 2 (lower is better)
Translates to: KGISVSHLFHCIFRSNDISALFI*TQVHNP
Trigger: AGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGA...GATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp TTTTATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCA +
Preference number: 2 (lower is better)
Translates to: FYLTYPMPCEPNVHKLAKIKAFQ*VTYSTA
Trigger: TGCAGTGGAATAGGTGACTCACTGAAATGCCTTTAT...TTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR TCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACGTGAGTGAGGCAATATaGATACAAAATGGGACTCAA +
Preference number: 2 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDVSEAI*IQNGTQ
Trigger: TTGAGTCCCATTTTGTATTCATATTGCCTCACTCAC...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
3UTR-3UTR GCA 90 bp AGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATAGTCACCTATTCCACTaGATATTCCGATCAAATGAC +
Preference number: 2 (lower is better)
Translates to: RRQSDRFHFCSRICSSIYSHLFH*IFRSND
Trigger: GTCATTTGATCGGAATATGCAGTGGAATAGGTGACT...ATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTATATGGTTTGTAAGATaGAAGTCAAACTTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: WWADTNVICYFHNPQLECIWFVR*KSNLEV
Trigger: CACTTCCAAGTTTGACTTGCATCTTACAAACCATAT...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CCA 90 bp GTATTGGTAACAAAATTAAAGGAAGACTACCCCACTCTTGAGTATAAGACCTTTTCATTATCGCAAAGGTaGTTATCTCCACTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: VLVTKLKEDYPTLEYKTFSLSQR*LSPLQC
Trigger: ACACTGCAGTGGAGATAACCACCTTTGCGATAATGA...AAAGGTCTTATACTCAAGAGTGGGGTAGTCTTCCTTTAATTTTGTTACCAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
3UTR-3UTR CCA 90 bp AAGACAACTTCTCACAATAAAGACAACTTCTCTTGGTGGGAGGTAAATTTTTGTCTTCGACGATACTTGTaGTACACTTGTTGGGTAAAG +
Preference number: 2 (lower is better)
Translates to: KTTSHNKDNFSWWEVNFCLRRYL*YTCWVK
Trigger: CTTTACCCAACAAGTGTACCACAAGTATCGTCGAAG...ACAAAAATTTACCTCCCACCAAGAGAAGTTGTCTTTATTGTGAGAAGTTGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CAA 90 bp ACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTCTATaGGAGACAGGTCTTAACACAAGTAGAGGAAAAAGCTGGTACAAA +
Preference number: 2 (lower is better)
Translates to: TNVICYFHNPQLECL*ETGLNTSRGKSWYK
Trigger: TTTGTACCAGCTTTTTCCTCTACTTGTGTTAAGACCTGTCTCCAATAGACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR TCA 90 bp TTTTATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAACAATGTACACTACACTaGAAGGCAAATCGAATAGCA +
Preference number: 2 (lower is better)
Translates to: FYLTYPMPCEPNVHKLAKQCTLH*KANRIA
Trigger: TGCTATTCGATTTGCCTTTCAGTGTAGTGTACATTG...TTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR GCA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTCATATGGAAACCACTTaGTTTTGCCAATACAACAAA +
Preference number: 2 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFHMETT*FCQYNK
Trigger: TTTGTTGTATTGGCAAAAGCAAGTGGTTTCCATATG...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
3UTR-3UTR GCA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTATTATTCTAACCCATTaGTTGTTTTGCACCCTCTTT +
Preference number: 2 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFIILTH*LFCTLF
Trigger: AAAGAGGGTGCAAAACAAGCAATGGGTTAGAATAAT...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
3UTR-3UTR CCA 90 bp TATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTAAGTACTTAAGAATCTaGGAAATGCTACTCAATCCC +
Preference number: 2 (lower is better)
Translates to: YLTYPMPCEPNVHKLAKTKYLRI*EMLLNP
Trigger: GGGATTGAGTAGCATTTCCCAGATTCTTAAGTACTT...AGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CCA 90 bp TTTTATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAAAGTACTTAAGAATCTaGGAAATGCTACTCAATCCC +
Preference number: 2 (lower is better)
Translates to: FYLTYPMPCEPNVHKLAKKYLRI*EMLLNP
Trigger: GGGATTGAGTAGCATTTCCCAGATTCTTAAGTACTT...TTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CCA 72 bp CTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTaGAGTGTCACTGAGCCCAGGAGAGGTCACAGGAAG +
Preference number: 3 (lower is better)
Translates to: LGSGIDVGWGGD*SVTEPRRGHRK
Trigger: CTTCCTGTGACCTCTCCTGGGCTCAGTGACACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CCA 72 bp ATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTaGGGCGGCGACTGGAGTGTCACTGAGCCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: MQVKLGSGIDVG*GGDWSVTEPRR
Trigger: TCTCCTGGGCTCAGTGACACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CCA 72 bp GTAAGATGCAAGTCAAACTTGGAAGTGGCATTGATGTaGGGTGGGGCGGCGACTGGAGTGTCACTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: VRCKSNLEVALM*GGAATGVSLSP
Trigger: TGGGCTCAGTGACACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR GCA 72 bp GCGGGCTCTGCCTGTGGCCTAGATAAACCAGCTTTTTaGCTTCAGTGGTGGGCAGACACCAATGTAATTTGC +
Preference number: 3 (lower is better)
Translates to: AGSACGLDKPAF*LQWWADTNVIC
Trigger: GCAAATTACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGCTGGTTTATCTAGGCCACAGGCAGAGCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CAA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGCATCTTCGACGATACTaGTGGTACACTTGTTGGGTA +
Preference number: 3 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGHLRRY*WYTCWV
Trigger: TACCCAACAAGTGTACCACAAGTATCGTCGAAGATG...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR TCA 72 bp GGCCCACGGTCTCTGGAATCCATTACCCAACCAACATaGCACTCTAGAGGGGGATTTGTGCTATGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GPRSLESITQPT*HSRGGFVLCLV
Trigger: AACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR GCA 72 bp TCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTaGAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: SVSHYRKGGYLH*SVGPTSSTKRW
Trigger: CCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CCA 72 bp AGCAGTCCTCTGGTCTGTCTCTCATTATCGCAAAGGTaGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTC +
Preference number: 3 (lower is better)
Translates to: SSPLVCLSLSQR*LSPLQCWPNFL
Trigger: GAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAGCAACGAATGAACCATaGCTGCTGAAGTTATTTCTG +
Preference number: 3 (lower is better)
Translates to: RCKSNLEVALMWGGAATGATNEP*LLKLFL
Trigger: CAGAAATAACTTCAGCAGCAATGGTTCATTCGTTGC...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CCA 72 bp TCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAAGAGGTGGGAATAGAC +
Preference number: 3 (lower is better)
Translates to: SLSQRWLSPLQC*PNFLHQEVGID
Trigger: GTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCA +
Preference number: 3 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSISTAV*AQLPPP
Trigger: TGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGAT...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp GCCCATGCAGCCCAGGCCAATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTTCCATCATCGATGCTTaGTTGATGGGACGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: AHAAQANYTEIGSSYKKSSIIDA*LMGRPL
Trigger: GAGAGGACGTCCCATCAACAAAGCATCGATGATGGA...ACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATTGGCCTGGGCTGCATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTAACTTGGAAGTGGCATaGATGTGGGGTGGGGCGGCG +
Preference number: 3 (lower is better)
Translates to: WWADTNVICYFHNPQLECNLEVA*MWGGAA
Trigger: CGCCGCCCCACCCCACATCAATGCCACTTCCAAGTT...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CAA 90 bp AAATGCCTGTCCAAGTTGCTTACTGGGATTAGAAGCAGAAGGCTGACAAAGAAAATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCA +
Preference number: 3 (lower is better)
Translates to: KCLSKLLTGIRSRRLTKKISTAV*AQLPPP
Trigger: TGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGAT...TTTCTTTGTCAGCCTTCTGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGATCTTCCCAAGCAAGTaGTCTAAATTCCTCATACAT +
Preference number: 3 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGIFPSK*SKFLIH
Trigger: ATGTATGAGGAATTTAGACAACTTGCTTGGGAAGAT...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CAA 90 bp ATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAGTACCTGTAATTTTCTTTaGCATCTTCCCAAGCAAGTT +
Preference number: 3 (lower is better)
Translates to: MQVKLGSGIDVGWGGDWSTCNFL*HLPKQV
Trigger: AACTTGCTTGGGAAGATGCAAAAGAAAATTACAGGT...ACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CAA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTCCATCATCGATGCTTaGTTGATGGGACGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: GITNLTDLSYLPCRESICSIIDA*LMGRPL
Trigger: GAGAGGACGTCCCATCAACAAAGCATCGATGATGGA...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CCA 72 bp GCCTGTGGCCTAGATAAACCAGCTTTTTGCCTTCAGTaGTGGGCAGACACCAATGTAATTTGCTATTTCCAC +
Preference number: 3 (lower is better)
Translates to: ACGLDKPAFCLQ*WADTNVICYFH
Trigger: GTGGAAATAGCAAATTACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGCTGGTTTATCTAGGCCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CAA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCA +
Preference number: 3 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHISTAV*AQLPPP
Trigger: TGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGAT...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp TACATCCATAACTTCCTGCTAGTGGTGCGCCTTCTGAAGGTGAAGCATTTGAAGACTCTAGAGGGGGATTaGTGCTATGCCTTGTTTTTC +
Preference number: 3 (lower is better)
Translates to: YIHNFLLVVRLLKVKHLKTLEGD*CYALFF
Trigger: GAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGT...CTTCAAATGCTTCACCTTCAGAAGGCGCACCACTAGCAGGAAGTTATGGATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CAA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCA +
Preference number: 3 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDISTAV*AQLPPP
Trigger: TGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGAT...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR TCA 72 bp GAGGTGGGAATAGACATTCTTGAACAGAAGACAGTCTaGTCGCTTTCATTTTTGCAGCAGGATTTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: EVGIDILEQKTV*SLSFLQQDLFQ
Trigger: CTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTCAAGAATGTCTATTCCCACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR TCA 72 bp CAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTTaGACAGAAGACAGTCTGATCGCTTTCATTTTTGCA +
Preference number: 3 (lower is better)
Translates to: QLPPPRGGNRHS*TEDSLIAFIFA
Trigger: TGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTCAAGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CCA 72 bp TGTGGCCTAGATAAACCAGCTTTTTGCCTTCAGTGGTaGGCAGACACCAATGTAATTTGCTATTTCCACAAT +
Preference number: 3 (lower is better)
Translates to: CGLDKPAFCLQW*ADTNVICYFHN
Trigger: ATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGCTGGTTTATCTAGGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR-3UTR CAA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCATCATCGATGCTTTGTaGATGGGACGTCCTCTCATA +
Preference number: 3 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIIIIDAL*MGRPLI
Trigger: TATGAGAGGACGTCCCATCAACAAAGCATCGATGAT...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTATCATCGATGCTTTGTaGATGGGACGTCCTCTCATA +
Preference number: 3 (lower is better)
Translates to: TNLTDLSYLPCRESICYFIIDAL*MGRPLI
Trigger: TATGAGAGGACGTCCCATCAACAAAGCATCGATGAT...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR-3UTR CAA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATAAATGCCTGTCCAAGTaGCTTACTGGGATTAGAAGC +
Preference number: 3 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHKCLSK*LTGIRS
Trigger: GCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR TCA 72 bp CATAAATGGTTAATGGACAGGCATTACCAACTTGACTaGCCTATCTTACCTACCCTGCAGAGAAAGTATATG +
Preference number: 3 (lower is better)
Translates to: HKWLMDRHYQLD*PILPTLQRKYM
Trigger: CATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTGTCCATTAACCATTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000432347.6
3UTR TCA 72 bp GCAGGATTTGTTCCAGTATTTATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCATATTCCGATCAAATG +
Preference number: 3 (lower is better)
Translates to: AGFVPVFIKAFQ*VTYSTAYSDQM
Trigger: CATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGAACAAATCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR GCA 72 bp ATTTATAAAGGCATTTCAGTGAGTCACCTATTCCACTaGATATTCCGATCAAATGACATCCAAGAGCTTCAG +
Preference number: 3 (lower is better)
Translates to: IYKGISVSHLFH*IFRSNDIQELQ
Trigger: CTGAAGCTCTTGGATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
3UTR-3UTR CAA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCAACCCATTGCTTGTTTaGCACCCTCTTTACAATATA +
Preference number: 3 (lower is better)
Translates to: KLISTVWKFLTEKLELHTNPLLV*HPLYNI
Trigger: TATATTGTAAAGAGGGTGCAAAACAAGCAATGGGTT...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
3UTR CCA 72 bp TTTGCTATTTCCACAATCCTCAATTGGAATGTCTATTaGAGACAGGTCTTAACACAAGTAGAGGAAAAAGCT +
Preference number: 3 (lower is better)
Translates to: FAISTILNWNVY*RQVLTQVEEKA
Trigger: AGCTTTTTCCTCTACTTGTGTTAAGACCTGTCTCCAATAGACATTCCAATTGAGGATTGTGGAAATAGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CCA 72 bp ATTTCAAGAGACCATTTAAAGCTAATAAGCACGGTTTaGAAATTTCTCACTGAAAAGCTGGAACTACATACC +
Preference number: 3 (lower is better)
Translates to: ISRDHLKLISTV*KFLTEKLELHT
Trigger: GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTTTAAATGGTCTCTTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
3UTR CCA 72 bp AGGATGTTTCTCAAGTTGGCTTACAAATTTGTTACTTaGCAGACTGAAAACATTTCCCACAGAACAAATATT +
Preference number: 3 (lower is better)
Translates to: RMFLKLAYKFVT*QTENISHRTNI
Trigger: AATATTTGTTCTGTGGGAAATGTTTTCAGTCTGCCAAGTAACAAATTTGTAAGCCAACTTGAGAAACATCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR CCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGGGGTGGGGCGGCGACTaGAGTGTCACTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGGWGGD*SVTEPR
Trigger: CCTGGGCTCAGTGACACTCCAGTCGCCGCCCCACCC...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp TCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTCCCTCGCCGCCTCTTTaGCCTCACATTCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: STAVLAQLPPPRGGNRHSPSPPL*PHIRAG
Trigger: CCCCGCCCGAATGTGAGGGCAAAGAGGCGGCGAGGG...AGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAGGCATTGATGTGGGGTaGGGCGGCGACTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RCKSNLEVALMWGGAATGGIDVG*GGDWSV
Trigger: GACACTCCAGTCGCCGCCCCACCCCACATCAATGCC...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGCGACTGGAGTGTCACTaGGCCCAGGAGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGRLECH*AQERSQ
Trigger: CTGTGACCTCTCCTGGGCTCAGTGACACTCCAGTCG...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp TCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGGCAGCAGCGGCGGCTaGCGCTTTTCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSGLSLIIAKVVISTAVLGSSGG*RFSAGP
Trigger: TGGCCCTGCGGAAAAGCGGCAGCCGCCGCTGCTGCC...CAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAGAAGTGGCATTGATGTaGGGTGGGGCGGCGACTGGA +
Preference number: 4 (lower is better)
Translates to: RCKSNLEVALMWGGAATGEVALM*GGAATG
Trigger: TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTC...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp AGCTGGCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGTCCGAGAAGTTACCTaGCTCCCCTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SWLKIKIIWWSEKLPASPVREVT*LPCGLC
Trigger: GCAGAGCCCGCAGGGGAGGCAGGTAACTTCTCGGAC...AGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp GGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGCAACCCTCGCCGCCTCTTTaGCCTCACATTCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSSYKKSSSPLVCLSLSQPSPPL*PHIRAG
Trigger: CCCCGCCCGAATGTGAGGGCAAAGAGGCGGCGAGGG...TTGCGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATCACCCTGACTGTATGTaGGCAAAAGGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVISTAVLAQLPPPRGGNHPDCM*AKGLAW
Trigger: CCAGGCCAAGCCTTTTGCTCACATACAGTCAGGGTG...ATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000648358.1
CDS-3UTR CCA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCGAGGGAACCGAATTCTaGCGCAGGGCAGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GITNLTDLSYLPCRESICEGTEF*RRAAAE
Trigger: CTCCGCGGCTGCCCTGCGCCAGAATTCGGTTCCCTC...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000432347.6
CDS-3UTR CCA 90 bp GTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATTCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: VVISTAVLAQLPPPRGGNSPLQC*PNFLHQ
Trigger: TTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGA...ATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CAA 72 bp TGGTTTGTAAGATGCAAGTCAAACTTGGAAGTGGCATaGATGTGGGGTGGGGCGGCGACTGGAGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: WFVRCKSNLEVA*MWGGAATGVSL
Trigger: CAGTGACACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCTTACAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGGCTGTAGGCAACGAATaGACCATTGCTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGAVGNE*TIAAEV
Trigger: AACTTCAGCAGCAATGGTTCATTCGTTGCCTACAGC...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp CCCAACCAACATGACACTCTAGAGGGGGATTTGTGCTATGCCTTGTTTTTCTCTACTTGGAAGTGGCATTaGTGTGGGGTGGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PNQHDTLEGDLCYALFFSTWKWH*CGVGRR
Trigger: TCGCCGCCCCACCCCACATCAATGCCACTTCCAAGT...AGAGAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp TCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTGGTGGTTATCTCCACTaGAGTGTTGGCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: STAVLAQLPPPRGGNRHSGGYLH*SVGPTS
Trigger: GGAAGTTGGGCCAACACTGCAGTGGAGATAACCACC...AGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAGATAAACCAGCTTTTTaGCTTCAGTGGTGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RCKSNLEVALMWGGAATGDKPAF*LQWWAD
Trigger: GTCTGCCCACCACTGAAGGCAAAAAGCTGGTTTATC...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp ACACTTCTTGTTGATGATATGAAGCCCCACCGACAGGCAGTCCCCTCTACTCAGTTTGCCCGAGACATGTaGGTGCCTGTTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: TLLVDDMKPHRQAVPSTQFARDM*VPVRSP
Trigger: AGGAGATCGAACAGGCACCCACATGTCTCGGGCAAA...CTGAGTAGAGGGGACTGCCTGTCGGTGGGGCTTCATATCATCAACAAGAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGAGGAGATTCTGGAACTaGTGTAGGCAACGAATGAAC +
Preference number: 4 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGRRFWN*CRQRMN
Trigger: GTTCATTCGTTGCCTACAGCAGTTCCAGAATCTCCT...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTGTTACCTGCCTCCCCTaGGGGCTCTGCCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WWADTNVICYFHNPQLECVTCLP*GLCLWP
Trigger: AGGCCACAGGCAGAGCCCGCAGGGGAGGCAGGTAAC...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGAACTGGCTCATACAGCTaGGGTGAGAGCCAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRTGSYS*GESQVS
Trigger: GCTTACCTGGCTCTCACCGCAGCTGTATGAGCCAGT...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp AAAGGCAAATCGAATAGCAAAGTACTTAAGAATCTGGGAAATGCTACTCAATCCGGCAGCAGCGGCGGCTaGCGCTTTTCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KGKSNSKVLKNLGNATQSGSSGG*RFSAGP
Trigger: TGGCCCTGCGGAAAAGCGGCAGCCGCCGCTGCTGCC...GGATTGAGTAGCATTTCCCAGATTCTTAAGTACTTTGCTATTCGATTTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp TATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTGGATCCTCCCGAGAATaGGCGGCGGGCATCGGGGCG +
Preference number: 4 (lower is better)
Translates to: YLTYPMPCEPNVHKLAKTGSSRE*AAGIGA
Trigger: CGCCCCGATGCCCGCCGCCCATTCTCGGGAGGATCC...AGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp ACACTTCTTGTTGATGATATGAAGCCCCACCGACAGGCAGTCCCCTCTACTCAGTGGCTGAGGACGCTCTaGAATCCAGTGTTCACTAAT +
Preference number: 4 (lower is better)
Translates to: TLLVDDMKPHRQAVPSTQWLRTL*NPVFTN
Trigger: ATTAGTGAACACTGGATTTCAGAGCGTCCTCAGCCA...CTGAGTAGAGGGGACTGCCTGTCGGTGGGGCTTCATATCATCAACAAGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR TCA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAGGTGTTCTTGTAGGATaGATTCTAGGAGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: RCKSNLEVALMWGGAATGGVLVG*ILGDSG
Trigger: TCCAGAATCTCCTAGAATTCATCCTACAAGAACACC...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp TCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCGATGTTACCTGTATGTaGGCAAAAGGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHYRKGGYLHCSVGPTSSDVTCM*AKGLAW
Trigger: CCAGGCCAAGCCTTTTGCTCACATACAGGTAACATC...GGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR TCA 90 bp CCAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGTTCTTGTTGATGATATaGAGCCCCACCGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRRQWLQKAKSSTGDSRKFLLMI*SPTDRQ
Trigger: CTGCCTGTCGGTGGGGCTTCATATCATCAACAAGAA...CTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp ACACTTCTTGTTGATGATATGAAGCCCCACCGACAGGCAGTCCCCTCTACTCAGAAGAGGCAAGAAGAGTaGTCTCTAAAGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: TLLVDDMKPHRQAVPSTQKRQEE*SLKPLA
Trigger: AGCCAGTGGCTTTAGAGAGCACTCTTCTTGCCTCTT...CTGAGTAGAGGGGACTGCCTGTCGGTGGGGCTTCATATCATCAACAAGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGCCAGGGAACCCGACTaGCCGTCTCTCCGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFAREPD*PSLRRD
Trigger: GTCCCGGCGGAGAGACGGGCAGTCGGGTTCCCTGGC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGGCAGCAGCGGCGGCTaGCGCTTTTCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFGSSGG*RFSAGP
Trigger: TGGCCCTGCGGAAAAGCGGCAGCCGCCGCTGCTGCC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR CCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCGAGGGAACCGAATTCTaGCGCAGGGCAGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTEGTEF*RRAAAE
Trigger: CTCCGCGGCTGCCCTGCGCCAGAATTCGGTTCCCTC...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp AACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTGAGGGAACCGAATTCTaGCGCAGGGCAGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: NRRQSDRFHFCSRICSSIEGTEF*RRAAAE
Trigger: CTCCGCGGCTGCCCTGCGCCAGAATTCGGTTCCCTC...AATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000432347.6
CDS-3UTR CCA 90 bp GCCCATGCAGCCCAGGCCAATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTTCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: AHAAQANYTEIGSSYKKSSPLQC*PNFLHQ
Trigger: TTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGA...ACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATTGGCCTGGGCTGCATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp AGGATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATGACACTGCTTTTTGCCTTCAGTaGTGGGCAGACACCAATGTA +
Preference number: 4 (lower is better)
Translates to: RMFLAHGLWNPLPNQHDTAFCLQ*WADTNV
Trigger: TACATTGGTGTCTGCCCACCACTGAAGGCAAAAAGC...AGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp TTTTCTGCTTTATTCATCTGGACACAAGTACATAACCCTGGAAACAGAAAACATGGATCCTCCCGAGAATaGGCGGCGGGCATCGGGGCG +
Preference number: 4 (lower is better)
Translates to: FSALFIWTQVHNPGNRKHGSSRE*AAGIGA
Trigger: CGCCCCGATGCCCGCCGCCCATTCTCGGGAGGATCC...ATGTTTTCTGTTTCCAGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGGATCCTCCCGAGAATaGGCGGCGGGCATCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFGSSRE*AAGIGA
Trigger: CGCCCCGATGCCCGCCGCCCATTCTCGGGAGGATCC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR CCA 90 bp AGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATTTCCAGCGGGGGCGGTaGCGGACCTGTCGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RRQSDRFHFCSRICSSIYFQRGR*RTCRVW
Trigger: CCAGACACGACAGGTCCGCCACCGCCCCCGCTGGAA...ATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
3UTR CAA 72 bp CTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCAAGAGGTGGGAATAGA +
Preference number: 4 (lower is better)
Translates to: LIIAKVVISTAV*AQLPPPRGGNR
Trigger: TCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCTGGCTGAGGACGCTCTaGAATCCAGTGTTCACTAAT +
Preference number: 4 (lower is better)
Translates to: SHYRKGGYLHCSVGPTSSWLRTL*NPVFTN
Trigger: ATTAGTGAACACTGGATTTCAGAGCGTCCTCAGCCA...GGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGCACCCTGACTGTATGTaGGCAAAAGGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSHPDCM*AKGLAW
Trigger: CCAGGCCAAGCCTTTTGCTCACATACAGTCAGGGTG...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000648358.1
CDS-3UTR TCA 90 bp TCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTCAGGCATTACCAACTTaGCTGACCTATCTTACCTAC +
Preference number: 4 (lower is better)
Translates to: STAVLAQLPPPRGGNRHSQALPT*LTYLTY
Trigger: GTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTG...AGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGGCCAAAGCTGGTAACTaGCCGCGGAGGCGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQAKAGN*PRRRGD
Trigger: GTCTCCACGCCTCCGCGGGCAGTTACCAGCTTTGGC...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCCCTCGCCGCCTCTTTaGCCTCACATTCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFPSPPL*PHIRAG
Trigger: CCCCGCCCGAATGTGAGGGCAAAGAGGCGGCGAGGG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR CCA 90 bp CCCAACCAACATGACACTCTAGAGGGGGATTTGTGCTATGCCTTGTTTTTCTCTCTGGCCCACGGTCTCTaGAATCCATTACCCAACCAA +
Preference number: 4 (lower is better)
Translates to: PNQHDTLEGDLCYALFFSLAHGL*NPLPNQ
Trigger: TTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAG...AGAGAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp ATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAGTTCCACAATCCTCAATTaGAATGTCTATTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: MQVKLGSGIDVGWGGDWSSTILN*NVYWRQ
Trigger: CTGTCTCCAATAGACATTCCAATTGAGGATTGTGGA...ACTCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp GCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTGCGGGAAGATCAAGATAATCTaGTGGTCCGAGAAGTTACCT +
Preference number: 4 (lower is better)
Translates to: AEDQDNLVVREVTCLPCGKIKII*WSEKLP
Trigger: AGGTAACTTCTCGGACCACCAGATTATCTTGATCTT...CCCGCAGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTTCCAGCGGGGGCGGTaGCGGACCTGTCGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFFQRGR*RTCRVW
Trigger: CCAGACACGACAGGTCCGCCACCGCCCCCGCTGGAA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR CCA 90 bp TTTTCTGCTTTATTCATCTGGACACAAGTACATAACCCTGGAAACAGAAAACATTTCCAGCGGGGGCGGTaGCGGACCTGTCGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSALFIWTQVHNPGNRKHFQRGR*RTCRVW
Trigger: CCAGACACGACAGGTCCGCCACCGCCCCCGCTGGAA...ATGTTTTCTGTTTCCAGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCTTTTATTTCCTTGGCTaGGGACGCTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: SHYRKGGYLHCSVGPTSSFYFLG*GRSEIQ
Trigger: CTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAAA...GGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp CCAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGTTTTATTTCCTTGGCTaGGGACGCTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: PRRQWLQKAKSSTGDSRKFYFLG*GRSEIQ
Trigger: CTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAAA...CTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR TCA 90 bp TCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: STAVLAQLPPPRGGNRHSIKAFQ*VTYSTA
Trigger: TGCAGTGGAATAGGTGACTCACTGAAATGCCTTTAT...AGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTGAACAGAAGACAGTCTaGTCGCTTTCATTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: STAVLAQLPPPRGGNRHSEQKTV*SLSFLQ
Trigger: CTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTC...AGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATCAATGTACACTACACTaGAAGGCAAATCGAATAGCA +
Preference number: 4 (lower is better)
Translates to: VVISTAVLAQLPPPRGGNQCTLH*KANRIA
Trigger: TGCTATTCGATTTGCCTTTCAGTGTAGTGTACATTG...ATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATGTGAGTGAGGCAATATaGATACAAAATGGGACTCAA +
Preference number: 4 (lower is better)
Translates to: VVISTAVLAQLPPPRGGNVSEAI*IQNGTQ
Trigger: TTGAGTCCCATTTTGTATTCATATTGCCTCACTCAC...ATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR GCA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCGGTGGTTATCTCCACTaGAGTGTTGGCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: GITNLTDLSYLPCRESICGGYLH*SVGPTS
Trigger: GGAAGTTGGGCCAACACTGCAGTGGAGATAACCACC...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp TCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGAATAAAAGCAGCCCATaGAGCCCAGGCCAATTACAC +
Preference number: 4 (lower is better)
Translates to: SSGLSLIIAKVVISTAVLNKSSP*SPGQLH
Trigger: GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATT...CAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGATCAAATGACATCGAGGGAACCGAATTCTaGCTCCAGGGTTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: KGISVSHLFHCIFRSNDIEGTEF*LQGFQR
Trigger: CCGCTGGAAACCCTGGAGGCAGAATTCGGTTCCCTC...GATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTGAGCTTTACCCGAGTTaGGGAGGCGCGAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFELYPS*GGASSQ
Trigger: TTGGCTGCTCGCGCCTCCCCAACTCGGGTAAAGCTC...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGGAGCTTTACCCGAGTTaGGGAGGCGCGAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQELYPS*GGASSQ
Trigger: TTGGCTGCTCGCGCCTCCCCAACTCGGGTAAAGCTC...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR CCA 90 bp AGGATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATGACACTTTTTGCCTTCAGTGGTaGGCAGACACCAATGTAATT +
Preference number: 4 (lower is better)
Translates to: RMFLAHGLWNPLPNQHDTFCLQW*ADTNVI
Trigger: AATTACATTGGTGTCTGCCCACCACTGAAGGCAAAA...AGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCCGGCCGGCTCCAACTaGGGACAGACAACCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFPAGSN*GQTTRE
Trigger: CTCTCGGGTTGTCTGTCCCCAGTTGGAGCCGGCCGG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR TCA 90 bp TCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGCAGGCATTACCAACTTaGCTGACCTATCTTACCTAC +
Preference number: 4 (lower is better)
Translates to: SSGLSLIIAKVVISTAVLQALPT*LTYLTY
Trigger: GTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTG...CAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ACACTTCTTGTTGATGATATGAAGCCCCACCGACAGGCAGTCCCCTCTACTCAGTTTCCCGGTTTTCTTTaGTGTCACTGTTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLLVDDMKPHRQAVPSTQFPGFL*CHCYFS
Trigger: AGAGAAGTAACAGTGACAGCAAAGAAAACCGGGAAA...CTGAGTAGAGGGGACTGCCTGTCGGTGGGGCTTCATATCATCAACAAGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp TCCACTGCAGTGTTGGCCCAACTTCCTCCACCAAGAGGTGGGAATAGACATTCTCAATTTCTACTTCTGTaGTATCCTTCAGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: STAVLAQLPPPRGGNRHSQFLLL*YPSVPL
Trigger: TAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTG...AGAATGTCTATTCCCACCTCTTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ATTAACTTTCCCACCATGAATAAAAGCAGCCCATGCAGCCCAGGCCAATTACACACTGTCCATCATCGATaGTTTGTTGATGGGACGTCC +
Preference number: 4 (lower is better)
Translates to: INFPTMNKSSPCSPGQLHTVHHR*FVDGTS
Trigger: GGACGTCCCATCAACAAAGCATCGATGATGGACAGT...GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATTCATGGTGGGAAAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTGACAGAGGATGTTCCTaGCCCACGGTCTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: WWADTNVICYFHNPQLECDRGCS*PTVSGI
Trigger: GATTCCAGAGACCGTGGGCCAGGAACATCCTCTGTC...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp ATTAACTTTCCCACCATGAATAAAAGCAGCCCATGCAGCCCAGGCCAATTACACAGAGTAGCAGTCCTCTaGTCTGTCTCTCATTATCGC +
Preference number: 4 (lower is better)
Translates to: INFPTMNKSSPCSPGQLHRVAVL*SVSHYR
Trigger: GCGATAATGAGAGACAGACCAGAGGACTGCTACTCT...GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATTCATGGTGGGAAAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp ACACTTCTTGTTGATGATATGAAGCCCCACCGACAGGCAGTCCCCTCTACTCAGATAGGAACCAGGATCTaGGATGAAATGCAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: TLLVDDMKPHRQAVPSTQIGTRI*DEMQEV
Trigger: AACTTCTTGCATTTCATCCCAGATCCTGGTTCCTAT...CTGAGTAGAGGGGACTGCCTGTCGGTGGGGCTTCATATCATCAACAAGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR TCA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGTGGCTGAGGACGCTCTaGAATCCAGTGTTCACTAAT +
Preference number: 4 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSWLRTL*NPVFTN
Trigger: ATTAGTGAACACTGGATTTCAGAGCGTCCTCAGCCA...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGAACAGAAGACAGTCTaGTCGCTTTCATTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSGLSLIIAKVVISTAVLEQKTV*SLSFLQ
Trigger: CTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTC...CAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GTCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGAACAGAAGACAGTCTaGTCGCTTTCATTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VLWSVSHYRKGGYLHCSVEQKTV*SLSFLQ
Trigger: CTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTC...AACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GCCCATGCAGCCCAGGCCAATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTGGGAATAGACATTCTTaGACAGAAGACAGTCTGATC +
Preference number: 4 (lower is better)
Translates to: AHAAQANYTEIGSSYKKSGNRHS*TEDSLI
Trigger: GATCAGACTGTCTTCTGTTCAAGAATGTCTATTCCC...ACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATTGGCCTGGGCTGCATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp TCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCAGTCACCTATTCCACTaGATATTCCGATCAAATGAC +
Preference number: 4 (lower is better)
Translates to: SHYRKGGYLHCSVGPTSSSHLFH*IFRSND
Trigger: GTCATTTGATCGGAATATGCAGTGGAATAGGTGACT...GGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCAATAAAAGCAGCCCATaGAGCCCAGGCCAATTACAC +
Preference number: 4 (lower is better)
Translates to: GITNLTDLSYLPCRESICNKSSP*SPGQLH
Trigger: GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATT...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp GTCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTAATGCCTGTCCAAGTTaGTTACTGGGATTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VLWSVSHYRKGGYLHCSVNACPS*LLGLEA
Trigger: TGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATT...AACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATGAGGGAACCGAATTCTaGCTCCAGGGTTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RRQSDRFHFCSRICSSIYEGTEF*LQGFQR
Trigger: CCGCTGGAAACCCTGGAGGCAGAATTCGGTTCCCTC...ATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp CCCAACCAACATGACACTCTAGAGGGGGATTTGTGCTATGCCTTGTTTTTCTCTATCAAGATAATCTGGTaGTCCGAGAAGTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: PNQHDTLEGDLCYALFFSIKIIW*SEKLPA
Trigger: GGCAGGTAACTTCTCGGACCACCAGATTATCTTGAT...AGAGAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGCATTACCAACTTGACTaGCCTATCTTACCTACCCTG +
Preference number: 4 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSHYQLD*PILPTL
Trigger: CAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATG...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGCAAGCTATCATAGCCTaGGGCAGGTCCTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQQAIIA*GRSSKK
Trigger: CTTCTTGGAGGACCTGCCTCAGGCTATGATAGCTTG...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR TCA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGACCCACAAACATGAATTaGACATTTCTTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRPTNMN*TFLCAR
Trigger: TCTGGCACAAAGAAATGTTCAATTCATGTTTGTGGG...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGACAATTTCTACTTCTGTaGTATCCTTCAGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRQFLLL*YPSVPL
Trigger: TAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTG...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp GTCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTAGTCACCTATTCCACTaGATATTCCGATCAAATGAC +
Preference number: 4 (lower is better)
Translates to: VLWSVSHYRKGGYLHCSVSHLFH*IFRSND
Trigger: GTCATTTGATCGGAATATGCAGTGGAATAGGTGACT...AACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AGGATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATGACACTCAGATTCTCATATCCTaGTTAGGAACTAGATGTTTA +
Preference number: 4 (lower is better)
Translates to: RMFLAHGLWNPLPNQHDTQILIS*LGTRCL
Trigger: TAAACATCTAGTTCCTAAGCAGGATATGAGAATCTG...AGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp AGGATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATGACACTGACACCAATGTAATTTaGTATTTCCACAATCCTCAA +
Preference number: 4 (lower is better)
Translates to: RMFLAHGLWNPLPNQHDTDTNVI*YFHNPQ
Trigger: TTGAGGATTGTGGAAATAGCAAATTACATTGGTGTC...AGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGAGGGAACCGAATTCTaGCTCCAGGGTTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFEGTEF*LQGFQR
Trigger: CCGCTGGAAACCCTGGAGGCAGAATTCGGTTCCCTC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR CCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCGAACACCTCCTTGCCTaGACTGTGAAGGTGCTACAG +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTEHLLA*TVKVLQ
Trigger: CTGTAGCACCTTCACAGTCCAGGCAAGGAGGTGTTC...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCTGGCCCACGGTCTCTaGAATCCATTACCCAACCAA +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTLAHGL*NPLPNQ
Trigger: TTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAG...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp TACATCCATAACTTCCTGCTAGTGGTGCGCCTTCTGAAGGTGAAGCATTTGAAGCTTCGACGATACTTGTaGTACACTTGTTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: YIHNFLLVVRLLKVKHLKLRRYL*YTCWVK
Trigger: CTTTACCCAACAAGTGTACCACAAGTATCGTCGAAG...CTTCAAATGCTTCACCTTCAGAAGGCGCACCACTAGCAGGAAGTTATGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp AGGATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATGACACTAATTGGAATGTCTATTaGAGACAGGTCTTAACACAA +
Preference number: 4 (lower is better)
Translates to: RMFLAHGLWNPLPNQHDTNWNVY*RQVLTQ
Trigger: TTGTGTTAAGACCTGTCTCCAATAGACATTCCAATT...AGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTGTCACTGGACTCCGGTaGAATATTCCTTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFVTGLR*NIPSGR
Trigger: TCTCCCAGAAGGAATATTTCACCGGAGTCCAGTGAC...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR TCA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GITNLTDLSYLPCRESICIKAFQ*VTYSTA
Trigger: TGCAGTGGAATAGGTGACTCACTGAAATGCCTTTAT...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGGGGAATAGACATTCTTaGACAGAAGACAGTCTGATC +
Preference number: 4 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSGNRHS*TEDSLI
Trigger: GATCAGACTGTCTTCTGTTCAAGAATGTCTATTCCC...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp ATTAACTTTCCCACCATGAATAAAAGCAGCCCATGCAGCCCAGGCCAATTACACCAATGTACACTACACTaGAAGGCAAATCGAATAGCA +
Preference number: 4 (lower is better)
Translates to: INFPTMNKSSPCSPGQLHQCTLH*KANRIA
Trigger: TGCTATTCGATTTGCCTTTCAGTGTAGTGTACATTG...GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATTCATGGTGGGAAAGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp AAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGATCAAATGACATCTCATCGATGCTTTGTTaGTGGGACGTCCTCTCATAC +
Preference number: 4 (lower is better)
Translates to: KGISVSHLFHCIFRSNDISSMLC*WDVLSY
Trigger: GTATGAGAGGACGTCCCATCAACAAAGCATCGATGA...GATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ATTAACTTTCCCACCATGAATAAAAGCAGCCCATGCAGCCCAGGCCAATTACACCAATTTCTACTTCTGTaGTATCCTTCAGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: INFPTMNKSSPCSPGQLHQFLLL*YPSVPL
Trigger: TAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTG...GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATTCATGGTGGGAAAGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp TTCTTGAACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAATAAAAGCAGCCCATaGAGCCCAGGCCAATTACAC +
Preference number: 4 (lower is better)
Translates to: FLNRRQSDRFHFCSRICSNKSSP*SPGQLH
Trigger: GTGTAATTGGCCTGGGCTGCATGGGCTGCTTTTATT...GGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGAATGCCTGTCCAAGTTaGTTACTGGGATTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSNACPS*LLGLEA
Trigger: TGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATT...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGACAGAGGATGTTCCTaGCCCACGGTCTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFDRGCS*PTVSGI
Trigger: GATTCCAGAGACCGTGGGCCAGGAACATCCTCTGTC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACTCTCCACTGCAGTGTTaGCCCAACTTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDSPLQC*PNFLHQ
Trigger: TTGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGA...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp TCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGTCTGCTTTATTCATCTaGACACAAGTACATAACCCT +
Preference number: 4 (lower is better)
Translates to: SSGLSLIIAKVVISTAVLSALFI*TQVHNP
Trigger: AGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGA...CAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCTGGCTGAGGACGCTCTaGAATCCAGTGTTCACTAAT +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTWLRTL*NPVFTN
Trigger: ATTAGTGAACACTGGATTTCAGAGCGTCCTCAGCCA...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR TCA 90 bp ACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTTGGCTGAGGACGCTCTaGAATCCAGTGTTCACTAAT +
Preference number: 4 (lower is better)
Translates to: TEDSLIAFIFAAGFVPVFWLRTL*NPVFTN
Trigger: ATTAGTGAACACTGGATTTCAGAGCGTCCTCAGCCA...AAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTCCTTGCCTGGACTGTaGAGGTGCTACAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFSLPGL*RCYRNF
Trigger: GAAGTTCCTGTAGCACCTTCACAGTCCAGGCAAGGA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTATTACCCAACCAACATaGCACTCTAGAGGGGGATTT +
Preference number: 4 (lower is better)
Translates to: WWADTNVICYFHNPQLECITQPT*HSRGGF
Trigger: AAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAAT...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCAGCACTGTTTAATGTaGATTGTCACTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTQHCLM*IVTGLR
Trigger: CCGGAGTCCAGTGACAATTCACATTAAACAGTGCTG...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR TCA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCCATATTCCGATCAAATaGCATCCAAGAGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GITNLTDLSYLPCRESICHIPIK*HPRASE
Trigger: TTCTGAAGCTCTTGGATGTCATTTGATCGGAATATG...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCTCATCGATGCTTTGTTaGTGGGACGTCCTCTCATAC +
Preference number: 4 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIISSMLC*WDVLSY
Trigger: GTATGAGAGGACGTCCCATCAACAAAGCATCGATGA...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TTCTTGAACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCCATTACCAACTTGACTaGCCTATCTTACCTACCCTG +
Preference number: 4 (lower is better)
Translates to: FLNRRQSDRFHFCSRICSHYQLD*PILPTL
Trigger: CAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATG...GGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp AATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCAGGCATTACCAACTTaGCTGACCTATCTTACCTAC +
Preference number: 4 (lower is better)
Translates to: NYTEIGSSYKKSSSPLVCQALPT*LTYLTY
Trigger: GTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCCTG...ACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp GTATTGGTAACAAAATTAAAGGAAGACTACCCCACTCTTGAGTATAAGACCTTTGGTGGTTATCTCCACTaGAGTGTTGGCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: VLVTKLKEDYPTLEYKTFGGYLH*SVGPTS
Trigger: GGAAGTTGGGCCAACACTGCAGTGGAGATAACCACC...AAAGGTCTTATACTCAAGAGTGGGGTAGTCTTCCTTTAATTTTGTTACCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR GCA 90 bp TCCAGTATTTATAAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGAACTGTCCATCATCGATaGTTTGTTGATGGGACGTCC +
Preference number: 4 (lower is better)
Translates to: SSIYKGISVSHLFHCIFRTVHHR*FVDGTS
Trigger: GGACGTCCCATCAACAAAGCATCGATGATGGACAGT...TCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AAATGCCTGTCCAAGTTGCTTACTGGGATTAGAAGCAGAAGGCTGACAAAGAAAAATGCCTGTCCAAGTTaGTTACTGGGATTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: KCLSKLLTGIRSRRLTKKNACPS*LLGLEA
Trigger: TGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATT...TTTCTTTGTCAGCCTTCTGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTTTGCCCGAGACATGTaGGTGCCTGTTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFFARDM*VPVRSP
Trigger: AGGAGATCGAACAGGCACCCACATGTCTCGGGCAAA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGAACACCTCCTTGCCTaGACTGTGAAGGTGCTACAG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFEHLLA*TVKVLQ
Trigger: CTGTAGCACCTTCACAGTCCAGGCAAGGAGGTGTTC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCTGGCCCACGGTCTCTaGAATCCATTACCCAACCAA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFLAHGL*NPLPNQ
Trigger: TTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp AAATGCCTGTCCAAGTTGCTTACTGGGATTAGAAGCAGAAGGCTGACAAAGAAATCATTATCGCAAAGGTaGTTATCTCCACTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KCLSKLLTGIRSRRLTKKSLSQR*LSPLQC
Trigger: ACACTGCAGTGGAGATAACCACCTTTGCGATAATGA...TTTCTTTGTCAGCCTTCTGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTAGAGTAGCAGTCCTCTaGTCTGTCTCTCATTATCGC +
Preference number: 4 (lower is better)
Translates to: TNLTDLSYLPCRESICYFRVAVL*SVSHYR
Trigger: GCGATAATGAGAGACAGACCAGAGGACTGCTACTCT...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCAGAGTAGCAGTCCTCTaGTCTGTCTCTCATTATCGC +
Preference number: 4 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIIRVAVL*SVSHYR
Trigger: GCGATAATGAGAGACAGACCAGAGGACTGCTACTCT...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGCCTCCAAGAAGGCAGTaGTTACAGAAGGCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQPPRRQ*LQKAKS
Trigger: GCTTTTAGCCTTCTGTAACCACTGCCTTCTTGGAGG...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR CCA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGAATGGTTGGGTTCCTTTaGTTAATGCATAATGTTTAC +
Preference number: 4 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRMVGFL*LMHNVY
Trigger: GTAAACATTATGCATTAACCAAAGGAACCCAACCAT...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR TCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCTTTTATTTCCTTGGCTaGGGACGCTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTFYFLG*GRSEIQ
Trigger: CTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAAA...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR TCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTTTTTATTTCCTTGGCTaGGGACGCTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: TNLTDLSYLPCRESICYFFYFLG*GRSEIQ
Trigger: CTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAAA...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCATTACCCAACCAACATaGCACTCTAGAGGGGGATTT +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTITQPT*HSRGGF
Trigger: AAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAAT...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR TCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCTTAGGTGGAAGTCTATaGCGATTACTCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTLGGSL*RLLSSP
Trigger: TGGTGAGGAGAGTAATCGTCATAGACTTCCACCTAA...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGTCACTGGACTCCGGTaGAATATTCCTTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFVTGLR*NIPSGR
Trigger: TCTCCCAGAAGGAATATTTCACCGGAGTCCAGTGAC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCAGAAGATCATCACCCTaGCTGTATGTGAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIIRRSSP*LYVSKR
Trigger: CCTTTTGCTCACATACAGTCAGGGTGATGATCTTCT...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000648358.1
CDS-3UTR TCA 90 bp TATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTTCATCGATGCTTTGTTaGTGGGACGTCCTCTCATAC +
Preference number: 4 (lower is better)
Translates to: YLTYPMPCEPNVHKLAKTSSMLC*WDVLSY
Trigger: GTATGAGAGGACGTCCCATCAACAAAGCATCGATGA...AGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACTCATCGATGCTTTGTTaGTGGGACGTCCTCTCATAC +
Preference number: 4 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDSSMLC*WDVLSY
Trigger: GTATGAGAGGACGTCCCATCAACAAAGCATCGATGA...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCCATTACCAACTTGACTaGCCTATCTTACCTACCCTG +
Preference number: 4 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIIHYQLD*PILPTL
Trigger: CAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATG...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TTTTCTGCTTTATTCATCTGGACACAAGTACATAACCCTGGAAACAGAAAACATGATGTTACCTGTATGTaGGCAAAAGGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSALFIWTQVHNPGNRKHDVTCM*AKGLAW
Trigger: CCAGGCCAAGCCTTTTGCTCACATACAGGTAACATC...ATGTTTTCTGTTTCCAGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR TCA 90 bp AAATGCCTGTCCAAGTTGCTTACTGGGATTAGAAGCAGAAGGCTGACAAAGAAAGTGAGTGAGGCAATATaGATACAAAATGGGACTCAA +
Preference number: 4 (lower is better)
Translates to: KCLSKLLTGIRSRRLTKKVSEAI*IQNGTQ
Trigger: TTGAGTCCCATTTTGTATTCATATTGCCTCACTCAC...TTTCTTTGTCAGCCTTCTGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR GCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCAGGAGATTCTGGAACTaGTGTAGGCAACGAATGAAC +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTRRFWN*CRQRMN
Trigger: GTTCATTCGTTGCCTACAGCAGTTCCAGAATCTCCT...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp CCCAACCAACATGACACTCTAGAGGGGGATTTGTGCTATGCCTTGTTTTTCTCTTGTTTTTCTCTTTCTTaGACTCTTTACATCAATGGC +
Preference number: 4 (lower is better)
Translates to: PNQHDTLEGDLCYALFFSCFSLS*TLYING
Trigger: GCCATTGATGTAAAGAGTCCAAGAAAGAGAAAAACA...AGAGAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGTGTCATGTTGGTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CCA 90 bp AAAGGCAAATCGAATAGCAAAGTACTTAAGAATCTGGGAAATGCTACTCAATCCAGAGTAGCAGTCCTCTaGTCTGTCTCTCATTATCGC +
Preference number: 4 (lower is better)
Translates to: KGKSNSKVLKNLGNATQSRVAVL*SVSHYR
Trigger: GCGATAATGAGAGACAGACCAGAGGACTGCTACTCT...GGATTGAGTAGCATTTCCCAGATTCTTAAGTACTTTGCTATTCGATTTGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGAAGTACTTAAGAATCTaGGAAATGCTACTCAATCCC +
Preference number: 4 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSKYLRI*EMLLNP
Trigger: GGGATTGAGTAGCATTTCCCAGATTCTTAAGTACTT...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATAAAGTTTTATTTCCTTGGCTaGGGACGCTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: DSLIAFIFAAGFVPVFIKFYFLG*GRSEIQ
Trigger: CTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAAA...CTTTATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGCTGTAGGCAACGAATaGACCATTGCTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFAVGNE*TIAAEV
Trigger: AACTTCAGCAGCAATGGTTCATTCGTTGCCTACAGC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCGGTGTTCTTGTAGGATaGATTCTAGGAGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTGVLVG*ILGDSG
Trigger: TCCAGAATCTCCTAGAATTCATCCTACAAGAACACC...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCAGCACTGTTTAATGTaGATTGTCACTGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFQHCLM*IVTGLR
Trigger: CCGGAGTCCAGTGACAATTCACATTAAACAGTGCTG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp TATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTAGAAGATCATCACCCTaGCTGTATGTGAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: YLTYPMPCEPNVHKLAKTRRSSP*LYVSKR
Trigger: CCTTTTGCTCACATACAGTCAGGGTGATGATCTTCT...AGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394288.7
ENST00000648358.1
CDS-3UTR TCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATGAACAGAAGACAGTCTaGTCGCTTTCATTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHEQKTV*SLSFLQ
Trigger: CTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTC...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TTCTTGAACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCGATCATCACCCTGACTaGAAAAAGTTTAAGCACACA +
Preference number: 4 (lower is better)
Translates to: FLNRRQSDRFHFCSRICSDHHPD*KKFKHT
Trigger: TGTGTGCTTAAACTTTTTTCAGTCAGGGTGATGATC...GGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR TCA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGGAGCCAGGTAAGCAATaGGCATATAAATTAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQEPGKQ*AYKLSL
Trigger: CAGGCTTAATTTATATGCTCATTGCTTACCTGGCTC...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR TCA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGTGTTACTTGGCAGACTaGAAACATTTCCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQCYLAD*KHFPQN
Trigger: GTTCTGTGGGAAATGTTTTCAGTCTGCCAAGTAACA...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR GCA 90 bp TTCTTGAACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCCAATTTCTACTTCTGTaGTATCCTTCAGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: FLNRRQSDRFHFCSRICSQFLLL*YPSVPL
Trigger: TAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTG...GGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTAGTCACCTATTCCACTaGATATTCCGATCAAATGAC +
Preference number: 4 (lower is better)
Translates to: NYTEIGSSYKKSSSPLVCSHLFH*IFRSND
Trigger: GTCATTTGATCGGAATATGCAGTGGAATAGGTGACT...ACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NYTEIGSSYKKSSSPLVCDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...ACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp TTCTTGAACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLNRRQSDRFHFCSRICSDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...GGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTTCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp TTTTATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTGTCCATCATCGATaGTTTGTTGATGGGACGTCC +
Preference number: 4 (lower is better)
Translates to: FYLTYPMPCEPNVHKLAKTVHHR*FVDGTS
Trigger: GGACGTCCCATCAACAAAGCATCGATGATGGACAGT...TTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCAATGCCTGTCCAAGTTaGTTACTGGGATTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIINACPS*LLGLEA
Trigger: TGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATT...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCAGGAACTTCTTGGTTTaGCTCAAAAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTRNFLV*LKRKFR
Trigger: CCTGAACTTCCTTTTGAGCCAAACCAAGAAGTTCCT...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp ACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTTCATTATCGCAAAGGTaGTTATCTCCACTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TEDSLIAFIFAAGFVPVFSLSQR*LSPLQC
Trigger: ACACTGCAGTGGAGATAACCACCTTTGCGATAATGA...AAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp AAATGCCTGTCCAAGTTGCTTACTGGGATTAGAAGCAGAAGGCTGACAAAGAAATCTGCTTTATTCATCTaGACACAAGTACATAACCCT +
Preference number: 4 (lower is better)
Translates to: KCLSKLLTGIRSRRLTKKSALFI*TQVHNP
Trigger: AGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGA...TTTCTTTGTCAGCCTTCTGCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTTTTATTTCCTTGGCTaGGGACGCTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFFYFLG*GRSEIQ
Trigger: CTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAAA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTATTACCCAACCAACATaGCACTCTAGAGGGGGATTT +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFITQPT*HSRGGF
Trigger: AAATCCCCCTCTAGAGTGTCATGTTGGTTGGGTAAT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTTAGGTGGAAGTCTATaGCGATTACTCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFLGGSL*RLLSSP
Trigger: TGGTGAGGAGAGTAATCGTCATAGACTTCCACCTAA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATCATATTCCGATCAAATaGCATCCAAGAGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHHIPIK*HPRASE
Trigger: TTCTGAAGCTCTTGGATGTCATTTGATCGGAATATG...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp GACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATAAAGATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: DSLIAFIFAAGFVPVFIKIKAFQ*VTYSTA
Trigger: TGCAGTGGAATAGGTGACTCACTGAAATGCCTTTAT...CTTTATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTGGGAATAGACATTCTTaGACAGAAGACAGTCTGATC +
Preference number: 4 (lower is better)
Translates to: YLTYPMPCEPNVHKLAKTGNRHS*TEDSLI
Trigger: GATCAGACTGTCTTCTGTTCAAGAATGTCTATTCCC...AGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACGGGAATAGACATTCTTaGACAGAAGACAGTCTGATC +
Preference number: 4 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDGNRHS*TEDSLI
Trigger: GATCAGACTGTCTTCTGTTCAAGAATGTCTATTCCC...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TCCAGTATTTATAAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGACAATGTACACTACACTaGAAGGCAAATCGAATAGCA +
Preference number: 4 (lower is better)
Translates to: SSIYKGISVSHLFHCIFRQCTLH*KANRIA
Trigger: TGCTATTCGATTTGCCTTTCAGTGTAGTGTACATTG...TCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TTTTCTGCTTTATTCATCTGGACACAAGTACATAACCCTGGAAACAGAAAACATCATTACCAACTTGACTaGCCTATCTTACCTACCCTG +
Preference number: 4 (lower is better)
Translates to: FSALFIWTQVHNPGNRKHHYQLD*PILPTL
Trigger: CAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATG...ATGTTTTCTGTTTCCAGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTTTTCCCGGTTTTCTTTaGTGTCACTGTTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFFPGFL*CHCYFS
Trigger: AGAGAAGTAACAGTGACAGCAAAGAAAACCGGGAAA...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR GCA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCTTTCCCGGTTTTCTTTaGTGTCACTGTTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIIFPGFL*CHCYFS
Trigger: AGAGAAGTAACAGTGACAGCAAAGAAAACCGGGAAA...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTTTTCCCGGTTTTCTTTaGTGTCACTGTTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: TEDSLIAFIFAAGFVPVFFPGFL*CHCYFS
Trigger: AGAGAAGTAACAGTGACAGCAAAGAAAACCGGGAAA...AAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTTTTCCCGGTTTTCTTTaGTGTCACTGTTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: TNLTDLSYLPCRESICYFFPGFL*CHCYFS
Trigger: AGAGAAGTAACAGTGACAGCAAAGAAAACCGGGAAA...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTCAATTTCTACTTCTGTaGTATCCTTCAGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFQFLLL*YPSVPL
Trigger: TAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTG...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTAGGAGATTCTGGAACTaGTGTAGGCAACGAATGAAC +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFRRFWN*CRQRMN
Trigger: GTTCATTCGTTGCCTACAGCAGTTCCAGAATCTCCT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR GCA 90 bp ACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTAGTCACCTATTCCACTaGATATTCCGATCAAATGAC +
Preference number: 4 (lower is better)
Translates to: TEDSLIAFIFAAGFVPVFSHLFH*IFRSND
Trigger: GTCATTTGATCGGAATATGCAGTGGAATAGGTGACT...AAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NRRQSDRFHFCSRICSSIDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...AATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp GTCACCTATTCCACTGCATATTCCGATCAAATGACATCCAAGAGCTTCAGAAGACACTGTTACATCGTTTaGTCTAGAAGAAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: VTYSTAYSDQMTSKSFRRHCYIV*SRRKDV
Trigger: AACATCTTTTCTTCTAGAGCAAACGATGTAACAGTG...TCTTCTGAAGCTCTTGGATGTCATTTGATCGGAATATGCAGTGGAATAGGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTCTGGGAGAGTTTATTaGTACCTGAAGCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFSGRVY*YLKLTG
Trigger: ACCAGTGAGCTTCAGGTACCAATAAACTCTCCCAGA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCAATGTGAATTGTCACTaGACTCCGGTGAAATATTCC +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTNVNCH*TPVKYS
Trigger: GGAATATTTCACCGGAGTCCAGTGACAATTCACATT...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
3UTR CAA 72 bp AAAAATAGTGTGAGACTGTCCATCATCGATGCTTTGTaGATGGGACGTCCTCTCATACTGATGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: KNSVRLSIIDAL*MGRPLILMYQK
Trigger: TTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATGATGGACAGTCTCACACTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGGTGTTCTTGTAGGATaGATTCTAGGAGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFGVLVG*ILGDSG
Trigger: TCCAGAATCTCCTAGAATTCATCCTACAAGAACACC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGAGTTTATTGGTACCTaGAGCTCACTGGTAGATGTA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFEFIGT*SSLVDV
Trigger: TACATCTACCAGTGAGCTTCAGGTACCAATAAACTC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR TCA 90 bp AGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATCATATTCCGATCAAATaGCATCCAAGAGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RRQSDRFHFCSRICSSIYHIPIK*HPRASE
Trigger: TTCTGAAGCTCTTGGATGTCATTTGATCGGAATATG...ATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp AAAGGCAAATCGAATAGCAAAGTACTTAAGAATCTGGGAAATGCTACTCAATCCCATATTCCGATCAAATaGCATCCAAGAGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KGKSNSKVLKNLGNATQSHIPIK*HPRASE
Trigger: TTCTGAAGCTCTTGGATGTCATTTGATCGGAATATG...GGATTGAGTAGCATTTCCCAGATTCTTAAGTACTTTGCTATTCGATTTGCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TTTTCTGCTTTATTCATCTGGACACAAGTACATAACCCTGGAAACAGAAAACATATAAAGGCATTTCAGTaGGTCACCTATTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: FSALFIWTQVHNPGNRKHIKAFQ*VTYSTA
Trigger: TGCAGTGGAATAGGTGACTCACTGAAATGCCTTTAT...ATGTTTTCTGTTTCCAGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACGATCATCACCCTGACTaGAAAAAGTTTAAGCACACA +
Preference number: 4 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDDHHPD*KKFKHT
Trigger: TGTGTGCTTAAACTTTTTTCAGTCAGGGTGATGATC...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR GCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACCAATTTCTACTTCTGTaGTATCCTTCAGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDQFLLL*YPSVPL
Trigger: TAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTG...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR GCA 90 bp AGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATGATCGCTTTCATTTTTaGAGCAGGATTTGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RRQSDRFHFCSRICSSIYDRFHF*SRICSS
Trigger: ACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATC...ATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTAGGAACTTCTTGGTTTaGCTCAAAAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFRNFLV*LKRKFR
Trigger: CCTGAACTTCCTTTTGAGCCAAACCAAGAAGTTCCT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCTTCGACGATACTTGTaGTACACTTGTTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFLRRYL*YTCWVK
Trigger: CTTTACCCAACAAGTGTACCACAAGTATCGTCGAAG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCGTGAAATATTCCTTCTaGGAGAGTTTATTGGTACCT +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTVKYSF*ESLLVP
Trigger: AGGTACCAATAAACTCTCCCAGAAGGAATATTTCAC...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp TTTTATCTAACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAATCATTATCGCAAAGGTaGTTATCTCCACTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: FYLTYPMPCEPNVHKLAKSLSQR*LSPLQC
Trigger: ACACTGCAGTGGAGATAACCACCTTTGCGATAATGA...TTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGTTAGATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp TCCAGTATTTATAAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGATCTGCTTTATTCATCTaGACACAAGTACATAACCCT +
Preference number: 4 (lower is better)
Translates to: SSIYKGISVSHLFHCIFRSALFI*TQVHNP
Trigger: AGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGA...TCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp TCCAGTATTTATAAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGAAAGTACTTAAGAATCTaGGAAATGCTACTCAATCCC +
Preference number: 4 (lower is better)
Translates to: SSIYKGISVSHLFHCIFRKYLRI*EMLLNP
Trigger: GGGATTGAGTAGCATTTCCCAGATTCTTAAGTACTT...TCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp CATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAAATACATAAGTACTTAAGAATCTaGGAAATGCTACTCAATCCC +
Preference number: 4 (lower is better)
Translates to: HRCFVDGTSSHTDVSKIHKYLRI*EMLLNP
Trigger: GGGATTGAGTAGCATTTCCCAGATTCTTAAGTACTT...ATGTATTTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
3UTR CAA 72 bp ATTTGCTATTTCCACAATCCTCAATTGGAATGTCTATaGGAGACAGGTCTTAACACAAGTAGAGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: ICYFHNPQLECL*ETGLNTSRGKS
Trigger: GCTTTTTCCTCTACTTGTGTTAAGACCTGTCTCCAATAGACATTCCAATTGAGGATTGTGGAAATAGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
3UTR CAA 72 bp GACACCAATGTAATTTGCTATTTCCACAATCCTCAATaGGAATGTCTATTGGAGACAGGTCTTAACACAAGT +
Preference number: 4 (lower is better)
Translates to: DTNVICYFHNPQ*ECLLETGLNTS
Trigger: ACTTGTGTTAAGACCTGTCTCCAATAGACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR TCA 90 bp GTATTGGTAACAAAATTAAAGGAAGACTACCCCACTCTTGAGTATAAGACCTTTCAATGTACACTACACTaGAAGGCAAATCGAATAGCA +
Preference number: 4 (lower is better)
Translates to: VLVTKLKEDYPTLEYKTFQCTLH*KANRIA
Trigger: TGCTATTCGATTTGCCTTTCAGTGTAGTGTACATTG...AAAGGTCTTATACTCAAGAGTGGGGTAGTCTTCCTTTAATTTTGTTACCAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCAATTTCTACTTCTGTaGTATCCTTCAGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFQFLLL*YPSVPL
Trigger: TAGAGGCACTGAAGGATAGCACAGAAGTAGAAATTG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR GCA 90 bp ACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTATTTTCACTGTTACATCGTTTaGTCTAGAAGAAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: TNLTDLSYLPCRESICYFHCYIV*SRRKDV
Trigger: AACATCTTTTCTTCTAGAGCAAACGATGTAACAGTG...AAAATAGCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR CCA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCTGTTTTTCTCTTTCTTaGACTCTTTACATCAATGGC +
Preference number: 4 (lower is better)
Translates to: KLISTVWKFLTEKLELHTCFSLS*TLYING
Trigger: GCCATTGATGTAAAGAGTCCAAGAAAGAGAAAAACA...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTAATGTGAATTGTCACTaGACTCCGGTGAAATATTCC +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFNVNCH*TPVKYS
Trigger: GGAATATTTCACCGGAGTCCAGTGACAATTCACATT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACTCTGCTTTATTCATCTaGACACAAGTACATAACCCT +
Preference number: 4 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDSALFI*TQVHNP
Trigger: AGGGTTATGTACTTGTGTCCAGATGAATAAAGCAGA...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CCA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACAAGTACTTAAGAATCTaGGAAATGCTACTCAATCCC +
Preference number: 4 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDKYLRI*EMLLNP
Trigger: GGGATTGAGTAGCATTTCCCAGATTCTTAAGTACTT...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR TCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTTGGAAATTTCTCACTaGAAAGCTGGAACTACATAC +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFLEISH*KAGTTY
Trigger: GTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTAAGTTCTCAACTTCTTaGTTTATGGCTGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFKFSTS*FMAVCL
Trigger: CAAACACACAGCCATAAAGCAAGAAGTTGAGAACTT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGTGAAATATTCCTTCTaGGAGAGTTTATTGGTACCT +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFVKYSF*ESLLVP
Trigger: AGGTACCAATAAACTCTCCCAGAAGGAATATTTCAC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTTCTCACTGAAAAGCTaGAACTACATACCCCATTTA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFFSLKS*NYIPHL
Trigger: TAAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCATATGGAAACCACTTaGTTTTGCCAATACAACAAA +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFHMETT*FCQYNK
Trigger: TTTGTTGTATTGGCAAAAGCAAGTGGTTTCCATATG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR GCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTATTATTCTAACCCATTaGTTGTTTTGCACCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFIILTH*LFCTLF
Trigger: AAAGAGGGTGCAAAACAAGCAATGGGTTAGAATAAT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCAACTTCTTGCTTTATaGCTGTGTGTTTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFQLLAL*LCVCFH
Trigger: ATGAAAACAAACACACAGCCATAAAGCAAGAAGTTG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTGTTTTTCTCTTTCTTaGACTCTTTACATCAATGGC +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFCFSLS*TLYING
Trigger: GCCATTGATGTAAAGAGTCCAAGAAAGAGAAAAACA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CCA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCTAATAAGCACGGTTTaGAAATTTCTCACTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFLISTV*KFLTEK
Trigger: CTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CCA 90 bp AAGACAACTTCTCACAATAAAGACAACTTCTCTTGGTGGGAGGTAAATTTTTGTAAAGACAACTTCTCTTaGTGGGAGGTAAATTTTTGT +
Preference number: 4 (lower is better)
Translates to: KTTSHNKDNFSWWEVNFCKDNFS*WEVNFC
Trigger: ACAAAAATTTACCTCCCACCAAGAGAAGTTGTCTTT...ACAAAAATTTACCTCCCACCAAGAGAAGTTGTCTTTATTGTGAGAAGTTGTCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS CCA 90 bp AACCCGACTGCCCGTCTCTCCGCCGGGACACCGGCCGGCTCCAACTaGGGACAGACAACCCGAGAGCCCGGCGGCCGTGGCCGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: NPTARLSAGTPAGSN*GQTTREPGGRGRRC
Trigger: GCAGCGGCGGCCACGGCCGCCGGGCTCTCGGGTTGTCTGTCCCCAGTTGGAGCCGGCCGGTGTCCCGGCGGAGAGACGGGCAGTCGGGTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR CAA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGAAACTTGGAAGTGGCATaGATGTGGGGTGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RCKSNLEVALMWGGAATGNLEVA*MWGGAA
Trigger: CGCCGCCCCACCCCACATCAATGCCACTTCCAAGTT...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGTCCCTCGCCGCCTCTTaGCCCTCACATTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSSLAAS*PSHSGG
Trigger: CCCGCCCGAATGTGAGGGCAAAGAGGCGGCGAGGGA...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGACATCTTCGACGATACTaGTGGTACACTTGTTGGGTA +
Preference number: 5 (lower is better)
Translates to: RCKSNLEVALMWGGAATGHLRRY*WYTCWV
Trigger: TACCCAACAAGTGTACCACAAGTATCGTCGAAGATG...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp TCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: SSGLSLIIAKVVISTAVLISTAV*AQLPPP
Trigger: TGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGAT...CAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCGGAGCTTTACCCGAGTaGGGGAGGCGCGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: KLISTVWKFLTEKLELHTGALPE*GRREQP
Trigger: TGGCTGCTCGCGCCTCCCCAACTCGGGTAAAGCTCC...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp GAAAGACTTTCAACTGAGAAGCATTATAAAAACACACTTCCTTTCCCACAGCAGGGAGCTTTACCCGAGTaGGGGAGGCGCGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ERLSTEKHYKNTLPFPQQGALPE*GRREQP
Trigger: TGGCTGCTCGCGCCTCCCCAACTCGGGTAAAGCTCC...CTGCTGTGGGAAAGGAAGTGTGTTTTTATAATGCTTCTCAGTTGAAAGTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR CAA 90 bp TACCCCTTAAGTGACCACATTAATAAGTCTTATGTCCAAGTGAAACATCATGACTCCCTCGCCGCCTCTTaGCCCTCACATTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: YPLSDHINKSYVQVKHHDSLAAS*PSHSGG
Trigger: CCCGCCCGAATGTGAGGGCAAAGAGGCGGCGAGGGA...GTCATGATGTTTCACTTGGACATAAGACTTATTAATGTGGTCACTTAAGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648358.1
ENST00000650359.1
CDS TCA 90 bp CTTGGGAATGTGAAGCACTCCTTGAACACCTCCTTGCCTGGACTGTaGAGGTGCTACAGGAACTTCTTGGTTTGGCTCAAAAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LGNVKHSLNTSLPGL*RCYRNFLVWLKRKF
Trigger: GAACTTCCTTTTGAGCCAAACCAAGAAGTTCCTGTAGCACCTTCACAGTCCAGGCAAGGAGGTGTTCAAGGAGTGCTTCACATTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: GITNLTDLSYLPCRESICISTAV*AQLPPP
Trigger: TGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGAT...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp AGGATGTTCCTGGCCCACGGTCTCTGGAATCCATTACCCAACCAACATGACACTAGATGCAAGTCAAACTaGGAAGTGGCATTGATGTGG +
Preference number: 5 (lower is better)
Translates to: RMFLAHGLWNPLPNQHDTRCKSN*EVALMW
Trigger: CCACATCAATGCCACTTCCAAGTTTGACTTGCATCT...AGTGTCATGTTGGTTGGGTAATGGATTCCAGAGACCGTGGGCCAGGAACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp AGATGCAAGTCAAACTTGGAAGTGGCATTGATGTGGGGTGGGGCGGCGACTGGATTCCACAATCCTCAATaGGAATGTCTATTGGAGACA +
Preference number: 5 (lower is better)
Translates to: RCKSNLEVALMWGGAATGFHNPQ*ECLLET
Trigger: TGTCTCCAATAGACATTCCAATTGAGGATTGTGGAA...TCCAGTCGCCGCCCCACCCCACATCAATGCCACTTCCAAGTTTGACTTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTCCCTCGCCGCCTCTTaGCCCTCACATTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFSLAAS*PSHSGG
Trigger: CCCGCCCGAATGTGAGGGCAAAGAGGCGGCGAGGGA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS-3UTR CAA 90 bp CCAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGTGGCTTTTTATTTCCTaGGCTGAGGACGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: PRRQWLQKAKSSTGDSRKWLFIS*AEDALK
Trigger: TTTCAGAGCGTCCTCAGCCAAGGAAATAAAAAGCCA...CTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR CAA 90 bp TCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCATCATCGATGCTTTGTaGATGGGACGTCCTCTCATA +
Preference number: 5 (lower is better)
Translates to: SHYRKGGYLHCSVGPTSSIIDAL*MGRPLI
Trigger: TATGAGAGGACGTCCCATCAACAAAGCATCGATGAT...GGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp GGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGCAATCCATCATCGATGCTTaGTTGATGGGACGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: GSSYKKSSSPLVCLSLSQSIIDA*LMGRPL
Trigger: GAGAGGACGTCCCATCAACAAAGCATCGATGATGGA...TTGCGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp TCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGGCCCAACTTCCTCCAAATGCCTGTCCAAGTaGCTTACTGGGATTAGAAGC +
Preference number: 5 (lower is better)
Translates to: SHYRKGGYLHCSVGPTSSKCLSK*LTGIRS
Trigger: GCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT...GGAGGAAGTTGGGCCAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGAAGGGCGTTCTCAGTATaGTCACCTTTATGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRRAFSV*SPLWLC
Trigger: ACACAGCCATAAAGGTGACAATACTGAGAACGCCCT...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS CCA 90 bp AATCTTTCTTGGGAATGTGAAGCACTCCTTGAACACCTCCTTGCCTaGACTGTGAAGGTGCTACAGGAACTTCTTGGTTTGGCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: NLSWECEALLEHLLA*TVKVLQELLGLAQK
Trigger: CTTTTGAGCCAAACCAAGAAGTTCCTGTAGCACCTTCACAGTCCAGGCAAGGAGGTGTTCAAGGAGTGCTTCACATTCCCAAGAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp AATTACACAGAAATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTATCTCCACTGCAGTGTaGGCCCAACTTCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: NYTEIGSSYKKSSSPLVCISTAV*AQLPPP
Trigger: TGGTGGAGGAAGTTGGGCCAACACTGCAGTGGAGAT...ACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTATTTCTGTGTAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp TCCTCTGGTCTGTCTCTCATTATCGCAAAGGTGGTTATCTCCACTGCAGTGTTGATCATCGATGCTTTGTaGATGGGACGTCCTCTCATA +
Preference number: 5 (lower is better)
Translates to: SSGLSLIIAKVVISTAVLIIDAL*MGRPLI
Trigger: TATGAGAGGACGTCCCATCAACAAAGCATCGATGAT...CAACACTGCAGTGGAGATAACCACCTTTGCGATAATGAGAGACAGACCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS TCA 90 bp CTGGACTCCGGTGAAATATTCCTTCTGGGAGAGTTTATTGGTACCTaGAGCTCACTGGTAGATGTAGGTTTAGCAGCATTTGGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LDSGEIFLLGEFIGT*SSLVDVGLAAFGGF
Trigger: AAAGCCACCAAATGCTGCTAAACCTACATCTACCAGTGAGCTTCAGGTACCAATAAACTCTCCCAGAAGGAATATTTCACCGGAGTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp GGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGCAAATCATCGATGCTTTGTaGATGGGACGTCCTCTCATA +
Preference number: 5 (lower is better)
Translates to: GSSYKKSSSPLVCLSLSQIIDAL*MGRPLI
Trigger: TATGAGAGGACGTCCCATCAACAAAGCATCGATGAT...TTGCGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp AGCTGGCTGAAGATCAAGATAATCTGGTGGTCCGAGAAGTTACCTGCCTCCCCTAAGTTATTCCCCTTCTaGGGAATAAAGACAACTTCT +
Preference number: 5 (lower is better)
Translates to: SWLKIKIIWWSEKLPASPKLFPF*GIKTTS
Trigger: AGAAGTTGTCTTTATTCCCAAGAAGGGGAATAACTT...AGGGGAGGCAGGTAACTTCTCGGACCACCAGATTATCTTGATCTTCAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS CCA 90 bp TCAGTCAAATCTTGCCTGGACTGTGAAGGTGCTACAGGAACTTCTTaGTTTGGCTCAAAAGGAAGTTCAGGTGTTAGGTTTTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SVKSCLDCEGATGTS*FGSKGSSGVRFSNC
Trigger: GCAGTTTGAAAACCTAACACCTGAACTTCCTTTTGAGCCAAACCAAGAAGTTCCTGTAGCACCTTCACAGTCCAGGCAAGATTTGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508819.5
CDS-3UTR CAA 90 bp GGCATTACCAACTTGACTGACCTATCTTACCTACCCTGCAGAGAAAGTATATGCTGGCTTTTTATTTCCTaGGCTGAGGACGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: GITNLTDLSYLPCRESICWLFIS*AEDALK
Trigger: TTTCAGAGCGTCCTCAGCCAAGGAAATAAAAAGCCA...GCATATACTTTCTCTGCAGGGTAGGTAAGATAGGTCAGTCAAGTTGGTAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp TACATCCATAACTTCCTGCTAGTGGTGCGCCTTCTGAAGGTGAAGCATTTGAAGGCAACGAATGAACCATaGCTGCTGAAGTTATTTCTG +
Preference number: 5 (lower is better)
Translates to: YIHNFLLVVRLLKVKHLKATNEP*LLKLFL
Trigger: CAGAAATAACTTCAGCAGCAATGGTTCATTCGTTGC...CTTCAAATGCTTCACCTTCAGAAGGCGCACCACTAGCAGGAAGTTATGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp ATAGGCAGCTCCTATAAAAAGAGTAGCAGTCCTCTGGTCTGTCTCTCATTATCGATCATCGATGCTTTGTaGATGGGACGTCCTCTCATA +
Preference number: 5 (lower is better)
Translates to: IGSSYKKSSSPLVCLSLSIIDAL*MGRPLI
Trigger: TATGAGAGGACGTCCCATCAACAAAGCATCGATGAT...CGATAATGAGAGACAGACCAGAGGACTGCTACTCTTTTTATAGGAGCTGCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp AAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGATCAAATGACATCTCCATCATCGATGCTTaGTTGATGGGACGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KGISVSHLFHCIFRSNDISIIDA*LMGRPL
Trigger: GAGAGGACGTCCCATCAACAAAGCATCGATGATGGA...GATGTCATTTGATCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGAACCCACAAACATGAATaGAACATTTCTTTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRTHKHE*NISLCQ
Trigger: CTGGCACAAAGAAATGTTCAATTCATGTTTGTGGGT...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS CCA 90 bp AGATGTAGGTTTAGCAGCATTTGGTGGCTTTGTAGAGGAATTAGGTaGAAGTCTATGACGATTACTCTCCTCACCAGAAGTAGAGGAATG +
Preference number: 5 (lower is better)
Translates to: RCRFSSIWWLCRGIR*KSMTITLLTRSRGM
Trigger: CATTCCTCTACTTCTGGTGAGGAGAGTAATCGTCATAGACTTCCACCTAATTCCTCTACAAAGCCACCAAATGCTGCTAAACCTACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326639.11
ENST00000503725.1
ENST00000508648.5
ENST00000649983.1
CDS-3UTR CAA 90 bp GTCCATCATCGATGCTTTGTTGATGGGACGTCCTCTCATACTGATGTATCAAAATGGCTTTTTATTTCCTaGGCTGAGGACGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: VHHRCFVDGTSSHTDVSKWLFIS*AEDALK
Trigger: TTTCAGAGCGTCCTCAGCCAAGGAAATAAAAAGCCA...TTTTGATACATCAGTATGAGAGGACGTCCCATCAACAAAGCATCGATGATGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp CAAGAAGGCAGTGGTTACAGAAGGCTAAAAGCAGTACTGGGGATTCCAGGAAGAAGTTGGCTTACAAATTaGTTACTTGGCAGACTGAAA +
Preference number: 5 (lower is better)
Translates to: QEGSGYRRLKAVLGIPGRSWLTN*LLGRLK
Trigger: TTTCAGTCTGCCAAGTAACAAATTTGTAAGCCAACT...TCTTCCTGGAATCCCCAGTACTGCTTTTAGCCTTCTGTAACCACTGCCTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS-3UTR CAA 90 bp TACATCCATAACTTCCTGCTAGTGGTGCGCCTTCTGAAGGTGAAGCATTTGAAGACCTGTAATTTTCTTTaGCATCTTCCCAAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: YIHNFLLVVRLLKVKHLKTCNFL*HLPKQV
Trigger: AACTTGCTTGGGAAGATGCAAAAGAAAATTACAGGT...CTTCAAATGCTTCACCTTCAGAAGGCGCACCACTAGCAGGAAGTTATGGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp GACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATAAAGTCCATCATCGATGCTTaGTTGATGGGACGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: DSLIAFIFAAGFVPVFIKSIIDA*LMGRPL
Trigger: GAGAGGACGTCCCATCAACAAAGCATCGATGATGGA...CTTTATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS TCA 90 bp TTAGCAGCATTTGGTGGCTTTGTAGAGGAATTAGGTGGAAGTCTATaGCGATTACTCTCCTCACCAGAAGTAGAGGAATGTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: LAAFGGFVEELGGSL*RLLSSPEVEECLFL
Trigger: AAGAAAAAGACATTCCTCTACTTCTGGTGAGGAGAGTAATCGTCATAGACTTCCACCTAATTCCTCTACAAAGCCACCAAATGCTGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326639.11
ENST00000503725.1
ENST00000508648.5
ENST00000649983.1
CDS CCA 90 bp AAACATCAAATAACTTCTGAGCTAATTCATCAGTCAAATCTTTCTTaGGAATGTGAAGCACTCCTTGAACACCTCCTTGCCTGGACTGTG +
Preference number: 5 (lower is better)
Translates to: KHQITSELIHQSNLS*ECEALLEHLLAWTV
Trigger: CACAGTCCAGGCAAGGAGGTGTTCAAGGAGTGCTTCACATTCCCAAGAAAGATTTGACTGATGAATTAGCTCAGAAGTTATTTGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTCAGGAACTTCTTGGTTaGGCTCAAAAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFQELLG*AQKEVQ
Trigger: CTGAACTTCCTTTTGAGCCAAACCAAGAAGTTCCTG...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCACTCTAGAGGGGGATTaGTGCTATGCCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: KLISTVWKFLTEKLELHTTLEGD*CYALFF
Trigger: GAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGT...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTCATCTTCGACGATACTaGTGGTACACTTGTTGGGTA +
Preference number: 5 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFHLRRY*WYTCWV
Trigger: TACCCAACAAGTGTACCACAAGTATCGTCGAAGATG...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp GTATTGGTAACAAAATTAAAGGAAGACTACCCCACTCTTGAGTATAAGACCTTTTCCATCATCGATGCTTaGTTGATGGGACGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: VLVTKLKEDYPTLEYKTFSIIDA*LMGRPL
Trigger: GAGAGGACGTCCCATCAACAAAGCATCGATGATGGA...AAAGGTCTTATACTCAAGAGTGGGGTAGTCTTCCTTTAATTTTGTTACCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR CAA 90 bp TCCAGTATTTATAAAGGCATTTCAGTGAGTCACCTATTCCACTGCATATTCCGAAAATGCCTGTCCAAGTaGCTTACTGGGATTAGAAGC +
Preference number: 5 (lower is better)
Translates to: SSIYKGISVSHLFHCIFRKCLSK*LTGIRS
Trigger: GCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT...TCGGAATATGCAGTGGAATAGGTGACTCACTGAAATGCCTTTATAAATACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp ACTTACCCAATGCCTTGTGAACCCAATGTTCATAAGCTAGCTAAAACTATCATCAAATGCCTGTCCAAGTaGCTTACTGGGATTAGAAGC +
Preference number: 5 (lower is better)
Translates to: TYPMPCEPNVHKLAKTIIKCLSK*LTGIRS
Trigger: GCTTCTAATCCCAGTAAGCAACTTGGACAGGCATTT...GATGATAGTTTTAGCTAGCTTATGAACATTGGGTTCACAAGGCATTGGGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp GACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTTATAAAGTGGCTTTTTATTTCCTaGGCTGAGGACGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: DSLIAFIFAAGFVPVFIKWLFIS*AEDALK
Trigger: TTTCAGAGCGTCCTCAGCCAAGGAAATAAAAAGCCA...CTTTATAAATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTTCTGGGAGAGTTTATaGGTACCTGAAGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFFWESL*VPEAHW
Trigger: CCAGTGAGCTTCAGGTACCAATAAACTCTCCCAGAA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp AACAGAAGACAGTCTGATCGCTTTCATTTTTGCAGCAGGATTTGTTCCAGTATTCTGAAATCACTAGCCTaGTTGGATTTCTTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: NRRQSDRFHFCSRICSSILKSLA*LDFFVL
Trigger: CAAGACAAAGAAATCCAACAAGGCTAGTGATTTCAG...AATACTGGAACAAATCCTGCTGCAAAAATGAAAGCGATCAGACTGTCTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394288.7
ENST00000432347.6
ENST00000648358.1
ENST00000650359.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTGGCTTTTTATTTCCTaGGCTGAGGACGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFWLFIS*AEDALK
Trigger: TTTCAGAGCGTCCTCAGCCAAGGAAATAAAAAGCCA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp GTATTGGTAACAAAATTAAAGGAAGACTACCCCACTCTTGAGTATAAGACCTTTTGGCTTTTTATTTCCTaGGCTGAGGACGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: VLVTKLKEDYPTLEYKTFWLFIS*AEDALK
Trigger: TTTCAGAGCGTCCTCAGCCAAGGAAATAAAAAGCCA...AAAGGTCTTATACTCAAGAGTGGGGTAGTCTTCCTTTAATTTTGTTACCAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCAGGAACTTCTTGGTTaGGCTCAAAAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFQELLG*AQKEVQ
Trigger: CTGAACTTCCTTTTGAGCCAAACCAAGAAGTTCCTG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp AAGACAACTTCTCACAATAAAGACAACTTCTCTTGGTGGGAGGTAAATTTTTGTACTCTAGAGGGGGATTaGTGCTATGCCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: KTTSHNKDNFSWWEVNFCTLEGD*CYALFF
Trigger: GAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGT...ACAAAAATTTACCTCCCACCAAGAGAAGTTGTCTTTATTGTGAGAAGTTGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTACTCTAGAGGGGGATTaGTGCTATGCCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFTLEGD*CYALFF
Trigger: GAAAAACAAGGCATAGCACAAATCCCCCTCTAGAGT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCATCTTCGACGATACTaGTGGTACACTTGTTGGGTA +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFHLRRY*WYTCWV
Trigger: TACCCAACAAGTGTACCACAAGTATCGTCGAAGATG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTTCACCAAGACTATCCTaGTTTGTGAAATCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFSPRLS*FVKSGK
Trigger: TTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGA...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp TGGTGGGCAGACACCAATGTAATTTGCTATTTCCACAATCCTCAATTGGAATGTAGACACCAATGTAATTaGCTATTTCCACAATCCTCA +
Preference number: 5 (lower is better)
Translates to: WWADTNVICYFHNPQLECRHQCN*LFPQSS
Trigger: TGAGGATTGTGGAAATAGCAAATTACATTGGTGTCT...ACATTCCAATTGAGGATTGTGGAAATAGCAAATTACATTGGTGTCTGCCCACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp AAGCTAATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCAAAGTTCTCAACTTCTaGCTTTATGGCTGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: KLISTVWKFLTEKLELHTKVLNF*LYGCVF
Trigger: AAACACACAGCCATAAAGCAAGAAGTTGAGAACTTT...GGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTATTAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGCAACGAATGAACCATaGCTGCTGAAGTTATTTCTG +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFATNEP*LLKLFL
Trigger: CAGAAATAACTTCAGCAGCAATGGTTCATTCGTTGC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp ATAAGCACGGTTTGGAAATTTCTCACTGAAAAGCTGGAACTACATACCCCATTTATCTTCCCAAGCAAGTaGTCTAAATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: ISTVWKFLTEKLELHTPFIFPSK*SKFLIH
Trigger: ATGTATGAGGAATTTAGACAACTTGCTTGGGAAGAT...AAATGGGGTATGTAGTTCCAGCTTTTCAGTGAGAAATTTCCAAACCGTGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTCTGAAATCACTAGCCTaGTTGGATTTCTTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFLKSLA*LDFFVL
Trigger: CAAGACAAAGAAATCCAACAAGGCTAGTGATTTCAG...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp GTATTGGTAACAAAATTAAAGGAAGACTACCCCACTCTTGAGTATAAGACCTTTCTGAAATCACTAGCCTaGTTGGATTTCTTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: VLVTKLKEDYPTLEYKTFLKSLA*LDFFVL
Trigger: CAAGACAAAGAAATCCAACAAGGCTAGTGATTTCAG...AAAGGTCTTATACTCAAGAGTGGGGTAGTCTTCCTTTAATTTTGTTACCAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432347.6
ENST00000650359.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTTCACCAAGACTATCCTaGTTTGTGAAATCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFSPRLS*FVKSGK
Trigger: TTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGA...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTATTCTAACCCATTGCTaGTTTTGCACCCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFILTHC*FCTLFT
Trigger: TGTAAAGAGGGTGCAAAACAAGCAATGGGTTAGAAT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS-3UTR CAA 90 bp AAGACAACTTCTCACAATAAAGACAACTTCTCTTGGTGGGAGGTAAATTTTTGTCAATTGGAATGTCTATaGGAGACAGGTCTTAACACA +
Preference number: 5 (lower is better)
Translates to: KTTSHNKDNFSWWEVNFCQLECL*ETGLNT
Trigger: TGTGTTAAGACCTGTCTCCAATAGACATTCCAATTG...ACAAAAATTTACCTCCCACCAAGAGAAGTTGTCTTTATTGTGAGAAGTTGTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTAAAGTTCTCAACTTCTaGCTTTATGGCTGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFKVLNF*LYGCVF
Trigger: AAACACACAGCCATAAAGCAAGAAGTTGAGAACTTT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp AAGACAACTTCTCACAATAAAGACAACTTCTCTTGGTGGGAGGTAAATTTTTGTATCTTCCCAAGCAAGTaGTCTAAATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: KTTSHNKDNFSWWEVNFCIFPSK*SKFLIH
Trigger: ATGTATGAGGAATTTAGACAACTTGCTTGGGAAGAT...ACAAAAATTTACCTCCCACCAAGAGAAGTTGTCTTTATTGTGAGAAGTTGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507259.5
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTATCTTCCCAAGCAAGTaGTCTAAATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFIFPSK*SKFLIH
Trigger: ATGTATGAGGAATTTAGACAACTTGCTTGGGAAGAT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTACCTGTAATTTTCTTTaGCATCTTCCCAAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFTCNFL*HLPKQV
Trigger: AACTTGCTTGGGAAGATGCAAAAGAAAATTACAGGT...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS-3UTR CAA 90 bp CTCTATAAAAGGTCACCAAGACTATCCTTGTTTGTGAAATCAGGGAAAACATTTGGAAACCACTTGCTTTaGCCAATACAACAAAATATC +
Preference number: 5 (lower is better)
Translates to: LYKRSPRLSLFVKSGKTFGNHLL*PIQQNI
Trigger: GATATTTTGTTGTATTGGCAAAAGCAAGTGGTTTCC...AAATGTTTTCCCTGATTTCACAAACAAGGATAGTCTTGGTGACCTTTTATAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326639.11
CDS CCA 72 bp GCCCGTCTCTCCGCCGGGACACCGGCCGGCTCCAACTaGGGACAGACAACCCGAGAGCCCGGCGGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: ARLSAGTPAGSN*GQTTREPGGRG
Trigger: GCCACGGCCGCCGGGCTCTCGGGTTGTCTGTCCCCAGTTGGAGCCGGCCGGTGTCCCGGCGGAGAGACGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649983.1
CDS CAA 72 bp GGCGCAGCACGCCGAGGCCGAGGAGCTTTACCCGAGTaGGGGAGGCGCGAGCAGCCAAAGCTGGTAACTGCC +
Preference number: 6 (lower is better)
Translates to: GAARRGRGALPE*GRREQPKLVTA
Trigger: GGCAGTTACCAGCTTTGGCTGCTCGCGCCTCCCCAACTCGGGTAAAGCTCCTCGGCCTCGGCGTGCTGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512292.5
CDS TCA 72 bp GTGAAGCACTCCTTGAACACCTCCTTGCCTGGACTGTaGAGGTGCTACAGGAACTTCTTGGTTTGGCTCAAA +
Preference number: 6 (lower is better)
Translates to: VKHSLNTSLPGL*RCYRNFLVWLK
Trigger: TTTGAGCCAAACCAAGAAGTTCCTGTAGCACCTTCACAGTCCAGGCAAGGAGGTGTTCAAGGAGTGCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS GCA 72 bp CATATGAATAATCAAAGTTCAATCGAGGATTTCCTCTaGCTCGTCCTCTTCCCCGTCCTCGGCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: HMNNQSSIEDFL*LVLFPVLGLFL
Trigger: GAGGAAGAGGCCGAGGACGGGGAAGAGGACGAGGCAGAGGAAATCCTCGATTGAACTTTGATTATTCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000326639.11
ENST00000394288.7
ENST00000432347.6
ENST00000507377.1
ENST00000508819.5
ENST00000512292.5
ENST00000648358.1
ENST00000649983.1
ENST00000650359.1
CDS CCA 72 bp TGGGAATGTGAAGCACTCCTTGAACACCTCCTTGCCTaGACTGTGAAGGTGCTACAGGAACTTCTTGGTTTG +
Preference number: 6 (lower is better)
Translates to: WECEALLEHLLA*TVKVLQELLGL
Trigger: CAAACCAAGAAGTTCCTGTAGCACCTTCACAGTCCAGGCAAGGAGGTGTTCAAGGAGTGCTTCACATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS CCA 72 bp AGGACACAGGCAGCACTGTTTAATGTGAATTGTCACTaGACTCCGGTGAAATATTCCTTCTGGGAGAGTTTA +
Preference number: 6 (lower is better)
Translates to: RTQAALFNVNCH*TPVKYSFWESL
Trigger: TAAACTCTCCCAGAAGGAATATTTCACCGGAGTCCAGTGACAATTCACATTAAACAGTGCTGCCTGTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1
CDS TCA 72 bp GGTGAAATATTCCTTCTGGGAGAGTTTATTGGTACCTaGAGCTCACTGGTAGATGTAGGTTTAGCAGCATTT +
Preference number: 6 (lower is better)
Translates to: GEIFLLGEFIGT*SSLVDVGLAAF
Trigger: AAATGCTGCTAAACCTACATCTACCAGTGAGCTTCAGGTACCAATAAACTCTCCCAGAAGGAATATTTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326639.11
ENST00000649983.1