RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LARGE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165905

Ensembl transcript IDs: ENST00000325468.9, ENST00000401752.6, ENST00000414027.2, ENST00000525609.5, ENST00000528236.5, ENST00000529052.5, ENST00000530437.5, ENST00000531526.5, ENST00000531847.1

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGCCCAATGCTAAGATaGGGGGCAGCGCCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKCPMLR*GAAPAQ
Trigger: CTGGGCCGGCGCTGCCCCTCATCTTAGCATTGGGCA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
3UTR-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTGCCCAATGCTAAGATaGGGGGCAGCGCCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: QTGWGRERPVPSHTIAARCPMLR*GAAPAQ
Trigger: CTGGGCCGGCGCTGCCCCTCATCTTAGCATTGGGCA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
3UTR-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGAGGGCAGGTTGCCCTaGTGTCTGCCCAATGCTAAG +
Preference number: 2 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGEGRLP*CLPNAK
Trigger: CTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
3UTR-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTGCCCAATGCTAAGATaGGGGGCAGCGCCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PETLNNLNSRDGGGQVALCPMLR*GAAPAQ
Trigger: CTGGGCCGGCGCTGCCCCTCATCTTAGCATTGGGCA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGACACGGTACGGGGCCTaGGCCTCCCGCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGTRYGA*ASRQRA
Trigger: TGCCCGCTGGCGGGAGGCTCAGGCCCCGTACCGTGT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGACACGGTACGGGGCCTaGGCCTCCCGCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMTRYGA*ASRQRA
Trigger: TGCCCGCTGGCGGGAGGCTCAGGCCCCGTACCGTGT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGCAAGAGCTCGCACTTaGGCGGCGGCGGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMARART*AAAAAA
Trigger: CGCAGCCGCCGCCGCCGCCCAAGTGCGAGCTCTTGC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGGGGGACACGTGGCATaGGCGGGCCGGGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGGGHVA*AGRGSI
Trigger: GATGCTTCCCCGGCCCGCTCATGCCACGTGTCCCCC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
64% GC, longest homopolymer 9 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGACGCGACCCGGGGCTaGAGGCTCCATCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKDATRG*RLHRRP
Trigger: GGGCCTGCGATGGAGCCTGCAGCCCCGGGTCGCGTC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGACGCGACCCGGGGCTaGAGGCTCCATCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARDATRG*RLHRRP
Trigger: GGGCCTGCGATGGAGCCTGCAGCCCCGGGTCGCGTC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGCTCCCAGCCAGCCTaGCGGAGCCGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKCSQPA*RSRSSR
Trigger: GCGGCTGGACCGGCTCCGGCAGGCTGGCTGGGAGCA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGCGGCACCACCAGTGCTaGCTTGCGCCGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMRHHQC*LAPAAQ
Trigger: CTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCG...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTGCCGGCACCACCAGTaGTGCCTTGCGCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMCRHHQ*CLAPAA
Trigger: GGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGCGGCACCACCAGTGCTaGCTTGCGCCGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKRHHQC*LAPAAQ
Trigger: CTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCG...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGAGCGGGCATAGTCTGTaGGTGCGTGGCCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGSGHSL*VRGLGA
Trigger: GGCCCCGAGGCCACGCACCCACAGACTATGCCCGCT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGAGCGGGCATAGTCTGTaGGTGCGTGGCCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMSGHSL*VRGLGA
Trigger: GGCCCCGAGGCCACGCACCCACAGACTATGCCCGCT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCCGTGTCCAGGACAATaGCGCGGGCCAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGPCPGQ*RGPAQQ
Trigger: CTGCTGAGCTGGCCCGCGTCATTGTCCTGGACACGG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGGGGCAGATGGATGGTaGAGGCCTCGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGGADGW*RPRAAP
Trigger: TGGTGCTGCCCGAGGCCTTCACCATCCATCTGCCCC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
62% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTGCCCAATGCTAAGATaGGGGGCAGCGCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMCPMLR*GAAPAQ
Trigger: CTGGGCCGGCGCTGCCCCTCATCTTAGCATTGGGCA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCTGCCTTGCGCCGGCTaGCCAGCCCCAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARLPCAG*PAPAAQ
Trigger: TTGAGCAGCTGGGGCTGGGCAGCCGGCGCAAGGCAG...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGCGCAGGGTCTCGAATaGCGGCACCACCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGAQGLE*RHHQCC
Trigger: GCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGCATAGTCTGTGGGTaGGTGGCCTCGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGIVCG*VASGPL
Trigger: GAGTGGCCCCGAGGCCACGCACCCACAGACTATGCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGACCGAGGGGCGAGATaGGAGACTCAGCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARDRGAR*ETQPWA
Trigger: CGCCCAGGGCTGAGTCTCCCATCTCGCCCCTCGGTC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325468.9
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGCCGCAGCCTCCCGTCTaGGGGGACACGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKPQPPV*GDTWHE
Trigger: CTCATGCCACGTGTCCCCCCAGACGGGAGGCTGCGG...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCCGCAGCCTCCCGTCTaGGGGGACACGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARPQPPV*GDTWHE
Trigger: CTCATGCCACGTGTCCCCCCAGACGGGAGGCTGCGG...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGCACCAGGTGGGGGCTaGCTGGGGCACACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMAPGGG*LGHTKS
Trigger: GCTCTTTGTGTGCCCCAGCCAGCCCCCACCTGGTGC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGCACCAGGTGGGGGCTaGCTGGGGCACACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGAPGGG*LGHTKS
Trigger: GCTCTTTGTGTGCCCCAGCCAGCCCCCACCTGGTGC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGACAAGGCCAGGCTCATaGGGCCAGGCCAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMTRPGS*GQASAC
Trigger: GCAGGCACTGGCCTGGCCCCATGAGCCTGGCCTTGT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGAGCGGGCATAGTCTGTaGGTGCGTGGCCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKSGHSL*VRGLGA
Trigger: GGCCCCGAGGCCACGCACCCACAGACTATGCCCGCT...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGAGCGGGCATAGTCTGTaGGTGCGTGGCCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARSGHSL*VRGLGA
Trigger: GGCCCCGAGGCCACGCACCCACAGACTATGCCCGCT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGAGCGTGGGGCAGATaGATGGTGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGAWGR*MVKASG
Trigger: GCCCGAGGCCTTCACCATCCATCTGCCCCACGCTCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGCAGTCACGATAGGTaGGGCTGGAGCGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGSHDR*GWSGSG
Trigger: CCCGCTTCCGCTCCAGCCCCACCTATCGTGACTGCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGCAGCAGCCCCATGGTaGCGGGACAAGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGAAAPW*RDKSWW
Trigger: CCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGCAGCAGCCCCATGGTaGCGGGACAAGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMAAAPW*RDKSWW
Trigger: CCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGAGGGCAGCAGCCCCATaGTGGCGGGACAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMRAAAP*WRDKSW
Trigger: CCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGAGGGCAGCAGCCCCATaGTGGCGGGACAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGRAAAP*WRDKSW
Trigger: CCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCCGTGTCCAGGACAATaGCGCGGGCCAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARPCPGQ*RGPAQQ
Trigger: CTGCTGAGCTGGCCCGCGTCATTGTCCTGGACACGG...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGCACACGGTGCACAGTaGGCTGCTGCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMAHGAQ*AAAAGT
Trigger: AGTTCCGGCAGCAGCAGCTCACTGTGCACCGTGTGC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGAAGACGTAAGGCGTaGGGGCCTGGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGRRKA*GPGPRP
Trigger: TGGCCTTGGCCCAGGCCCTCACGCCTTACGTCTTCC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGGCAGATGGATGGTaGAGGCCTCGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARGADGW*RPRAAP
Trigger: TGGTGCTGCCCGAGGCCTTCACCATCCATCTGCCCC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGACACAAGGCAGACGCTaGACTAGCCCCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGTQGRR*TSPGCS
Trigger: GGAGCACCCGGGGCTAGTGCAGCGTCTGCCTTGTGT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCGCAGGGTCTCGAATaGCGGCACCACCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKAQGLE*RHHQCC
Trigger: GCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCATAGTCTGTGGGTaGGTGGCCTCGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGIVCG*VASGPL
Trigger: GAGTGGCCCCGAGGCCACGCACCCACAGACTATGCC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGGATCCAGGAGACCTaGGGCTTGAGCTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGIQET*GLSWSA
Trigger: TGCCGACCAGCTCAAGCCCCAGGTCTCCTGGATCCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGAGCGTGGGGCAGATaGATGGTGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARGAWGR*MVKASG
Trigger: GCCCGAGGCCTTCACCATCCATCTGCCCCACGCTCC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCAGTCACGATAGGTaGGGCTGGAGCGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGSHDR*GWSGSG
Trigger: CCCGCTTCCGCTCCAGCCCCACCTATCGTGACTGCC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCAGCAGCCCCATGGTaGCGGGACAAGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARAAAPW*RDKSWW
Trigger: CCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGAGGGCAGCAGCCCCATaGTGGCGGGACAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARRAAAP*WRDKSW
Trigger: CCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTCCTGGTCAGCCAGTaGGGTGGCAGGCAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKVLVSQ*GGRQAK
Trigger: CTTAGCCTGCCTGCCACCTCACTGGCTGACCAGGAC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCACACGGTGCACAGTaGGCTGCTGCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARAHGAQ*AAAAGT
Trigger: AGTTCCGGCAGCAGCAGCTCACTGTGCACCGTGTGC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGCAGCAAGCACTGGTaGGGCCTCGACGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGSKHW*GLDEMQ
Trigger: CTGCATTTCGTCGAGGCCTCACCAGTGCTTGCTGCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTGGAATGGGGGAAGCTaGAGCGGTAGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGWNGGS*SGSAGS
Trigger: AGACCCTGCGCTACCGCTTCAGCTTCCCCCATTCCA...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGCCACTCGTGGTACCTaGAGGTGTAGAGAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMATRGT*RCRECP
Trigger: CGGGCACTCTCTACACCTTCAGGTACCACGAGTGGC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCACACGGTACGGGGCCTaGGCCTCCCGCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSATRYGA*ASRQRA
Trigger: TGCCCGCTGGCGGGAGGCTCAGGCCCCGTACCGTGT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGTGGAATTCGTCCTTaGGGGCCTGGAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGGIRP*GPGGSH
Trigger: GTGACTGCCTCCAGGCCCTCAAGGACGAATTCCACC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCTGGGAGGTATTTaGGGGCAGCAGCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGLGGI*GQQPHG
Trigger: ACCATGGGGCTGCTGCCCTCAAATACCTCCCAGCCC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGACGCGACCCGGGGCTaGAGGCTCCATCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSADATRG*RLHRRP
Trigger: GGGCCTGCGATGGAGCCTGCAGCCCCGGGTCGCGTC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTCTCGGCTGGAGTTATaGCCCGCACACACGATGGCC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGSRLEL*PAHTMA
Trigger: GGCCATCGTGTGTGCGGGGCATAACTCCAGCCGAGA...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTCTCGGCTGGAGTTATaGCCCGCACACACGATGGCC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMSRLEL*PAHTMA
Trigger: GGCCATCGTGTGTGCGGGGCATAACTCCAGCCGAGA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTGCTCCCAGCCAGCCTaGCGGAGCCGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALCSQPA*RSRSSR
Trigger: GCGGCTGGACCGGCTCCGGCAGGCTGGCTGGGAGCA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCTGCTCCCAGCCAGCCTaGCGGAGCCGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSACSQPA*RSRSSR
Trigger: GCGGCTGGACCGGCTCCGGCAGGCTGGCTGGGAGCA...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGACACAAGGCAGACGCTaGACTAGCCCCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARTQGRR*TSPGCS
Trigger: GGAGCACCCGGGGCTAGTGCAGCGTCTGCCTTGTGT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGCCAGGCCAGTGCCTaGACAGGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGQASA*TGLPTS
Trigger: AGATGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGGCCAGGCCAGTGCCTaGACAGGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGGQASA*TGLPTS
Trigger: AGATGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTGGCGGAGGGCAGGTTaGCCTGGTGTCTGCCCAATG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARWRRAG*PGVCPM
Trigger: CATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGACCCCACAGATGCTCTaGCCCAGCCCTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMTPQML*PSPSQR
Trigger: TCTCTGGGAAGGGCTGGGGCAGAGCATCTGTGGGGT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGCAAGAGCTCGCACTTaGGCGGCGGCGGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALARART*AAAAAA
Trigger: CGCAGCCGCCGCCGCCGCCCAAGTGCGAGCTCTTGC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCCCCGCACACACGATaGCCACATGCAAGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARAPHTR*PHARAR
Trigger: GCGAGCTCTTGCATGTGGCCATCGTGTGTGCGGGGC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGGGGTGGCGGTTCATaGGGCAGGAAAGTGACATGC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGGGGS*GRKVTC
Trigger: GCATGTCACTTTCCTGCCCCATGAACCGCCACCCCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCGGGGACAGTCTCGTaGCACCACCACGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKAGTVS*HHHVGF
Trigger: GAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCACGATAGGTGGGGCTaGAGCGGAAGCGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGHDRWG*SGSGRC
Trigger: ACATCTCCCGCTTCCGCTCCAGCCCCACCTATCGTG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCAGCCCCAAACTGGCTaGGGCAGAGAGAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGQPQTG*GRERPV
Trigger: GACTGGTCTCTCTCTGCCCCAGCCAGTTTGGGGCTG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGGGGACACGTGGCATaGGCGGGCCGGGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGGHVA*AGRGSI
Trigger: GATGCTTCCCCGGCCCGCTCATGCCACGTGTCCCCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCAGCAAGCACTGGTaGGGCCTCGACGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGSKHW*GLDEMQ
Trigger: CTGCATTTCGTCGAGGCCTCACCAGTGCTTGCTGCC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTGGAATGGGGGAAGCTaGAGCGGTAGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARWNGGS*SGSAGS
Trigger: AGACCCTGCGCTACCGCTTCAGCTTCCCCCATTCCA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGGAATGGGGGAAGCTaGAGCGGTAGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKWNGGS*SGSAGS
Trigger: AGACCCTGCGCTACCGCTTCAGCTTCCCCCATTCCA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCCACTCGTGGTACCTaGAGGTGTAGAGAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKATRGT*RCRECP
Trigger: CGGGCACTCTCTACACCTTCAGGTACCACGAGTGGC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGTGGAATTCGTCCTTaGGGGCCTGGAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGGIRP*GPGGSH
Trigger: GTGACTGCCTCCAGGCCCTCAAGGACGAATTCCACC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTGGAATTCGTCCTTaGGGGCCTGGAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARGGIRP*GPGGSH
Trigger: GTGACTGCCTCCAGGCCCTCAAGGACGAATTCCACC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGACGCGACCCGGGGCTaGAGGCTCCATCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSDATRG*RLHRRP
Trigger: GGGCCTGCGATGGAGCCTGCAGCCCCGGGTCGCGTC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGCACACGATGGCCACATaGAAGAGCTCGCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMHTMAT*KSSHLG
Trigger: GCCCAAGTGCGAGCTCTTGCATGTGGCCATCGTGTG...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCACACGATGGCCACATaGAAGAGCTCGCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGHTMAT*KSSHLG
Trigger: GCCCAAGTGCGAGCTCTTGCATGTGGCCATCGTGTG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTGCTCCCAGCCAGCCTaGCGGAGCCGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSCSQPA*RSRSSR
Trigger: GCGGCTGGACCGGCTCCGGCAGGCTGGCTGGGAGCA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGAGTTGTGCCAGGGCCTaGTGCAACTGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMSCARA*CNCSAP
Trigger: TGGTGCTGAGCAGTTGCAGCAGGCCCTGGCACAACT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGAGTTGTGCCAGGGCCTaGTGCAACTGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGSCARA*CNCSAP
Trigger: TGGTGCTGAGCAGTTGCAGCAGGCCCTGGCACAACT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTTCCTCGTCCAGTTGTaGCAGGGCCTGCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMFLVQL*QGLLQL
Trigger: CAGTTGCAGCAGGCCCTGGCACAACTGGACGAGGAA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCGGTGCACAGTGAGCTaGTGCTGCCGGAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGRCTVS*CCRNSK
Trigger: CTTTGAGTTCCGGCAGCAGCAGCTCACTGTGCACCG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGTGACATGCACACGGTaGACAGTGAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGVTCTR*TVSCCC
Trigger: GCAGCAGCAGCTCACTGTGCACCGTGTGCATGTCAC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGTGACATGCACACGGTaGACAGTGAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMVTCTR*TVSCCC
Trigger: GCAGCAGCAGCTCACTGTGCACCGTGTGCATGTCAC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCGGCACCACCAGTGCTaGCTTGCGCCGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSARHHQC*LAPAAQ
Trigger: CTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCG...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCTGCCGGCACCACCAGTaGTGCCTTGCGCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSACRHHQ*CLAPAA
Trigger: GGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCA...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGACCCCACAGATGCTCTaGCCCAGCCCTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKTPQML*PSPSQR
Trigger: TCTCTGGGAAGGGCTGGGGCAGAGCATCTGTGGGGT...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR GCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGACCCCACAGATGCTCTaGCCCAGCCCTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARTPQML*PSPSQR
Trigger: TCTCTGGGAAGGGCTGGGGCAGAGCATCTGTGGGGT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGCGGAGTAGTGCTTGTTaGGGATCCAGGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMRSSAC*GSRRPG
Trigger: CCCAGGTCTCCTGGATCCCCAACAAGCACTACTCCG...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGGGTGGCGGTTCATaGGGCAGGAAAGTGACATGC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARGGGGS*GRKVTC
Trigger: GCATGTCACTTTCCTGCCCCATGAACCGCCACCCCC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTCCAGGCTTGGAGCGTaGGGCAGATGGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGSRLGA*GRWMVK
Trigger: CTTCACCATCCATCTGCCCCACGCTCCAAGCCTGGA...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTCCAGGCTTGGAGCGTaGGGCAGATGGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMSRLGA*GRWMVK
Trigger: CTTCACCATCCATCTGCCCCACGCTCCAAGCCTGGA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCACGATAGGTGGGGCTaGAGCGGAAGCGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARHDRWG*SGSGRC
Trigger: ACATCTCCCGCTTCCGCTCCAGCCCCACCTATCGTG...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCGGGACAAGTCCTGGTaGAATTCGTCCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGRDKSW*NSSLRA
Trigger: GGCCCTCAAGGACGAATTCCACCAGGACTTGTCCCG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGCGGGACAAGTCCTGGTaGAATTCGTCCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMRDKSW*NSSLRA
Trigger: GGCCCTCAAGGACGAATTCCACCAGGACTTGTCCCG...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGAGGGCAGGTTGCCCTaGTGTCTGCCCAATGCTAAG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMEGRLP*CLPNAK
Trigger: CTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCAGCCCCAAACTGGCTaGGGCAGAGAGAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARQPQTG*GRERPV
Trigger: GACTGGTCTCTCTCTGCCCCAGCCAGTTTGGGGCTG...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGGGGACACGTGGCATaGGCGGGCCGGGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGGHVA*AGRGSI
Trigger: GATGCTTCCCCGGCCCGCTCATGCCACGTGTCCCCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCGGCATGATAAAAGCTaGCACGGACAGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGRHDKS*HGQQAP
Trigger: TGGTGCCTGCTGTCCGTGTCAGCTTTTATCATGCCG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTGTCAGAGGCGAAGGTaGCATCCGTGTCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGCQRRR*HPCPGQ
Trigger: TTGTCCTGGACACGGATGTCACCTTCGCCTCTGACA...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCATGGGGCAGGAAAGTaGCATGCACACGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARHGAGK*HAHGAQ
Trigger: CTGTGCACCGTGTGCATGTCACTTTCCTGCCCCATG...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGCATGGGGCAGGAAAGTaGCATGCACACGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKHGAGK*HAHGAQ
Trigger: CTGTGCACCGTGTGCATGTCACTTTCCTGCCCCATG...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGCTCCATCGCAGGCCCTaGGGACCGAGGGGCGAGATG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALLHRRP*GPRGEM
Trigger: CATCTCGCCCCTCGGTCCGCAGGGCCTGCGATGGAG...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325468.9
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGCACACGATGGCCACATaGAAGAGCTCGCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKHTMAT*KSSHLG
Trigger: GCCCAAGTGCGAGCTCTTGCATGTGGCCATCGTGTG...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTTCCTCGTCCAGTTGTaGCAGGGCCTGCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARFLVQL*QGLLQL
Trigger: CAGTTGCAGCAGGCCCTGGCACAACTGGACGAGGAA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGACAGTGAGCTGCTGCTaGCGGAACTCAAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKTVSCC*RNSKQG
Trigger: CCCCTGCTTTGAGTTCCGGCAGCAGCAGCTCACTGT...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGCGGTGCACAGTGAGCTaGTGCTGCCGGAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKRCTVS*CCRNSK
Trigger: CTTTGAGTTCCGGCAGCAGCAGCTCACTGTGCACCG...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGGCAGGAAAGTGACATaGACACGGTGCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMGRKVT*TRCTVS
Trigger: GCTCACTGTGCACCGTGTGCATGTCACTTTCCTGCC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGCTGCCTTGCGCCGGCTaGCCAGCCCCAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALLPCAG*PAPAAQ
Trigger: TTGAGCAGCTGGGGCTGGGCAGCCGGCGCAAGGCAG...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCGGCACCACCAGTGCTaGCTTGCGCCGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSRHHQC*LAPAAQ
Trigger: CTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTGCCGGCACCACCAGTaGTGCCTTGCGCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSCRHHQ*CLAPAA
Trigger: GGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGCGTTGAAGATGTCCTaGTCAGCCAGTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGALKMS*SASEVA
Trigger: TGCCACCTCACTGGCTGACCAGGACATCTTCAACGC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCGTAGGGTTCATAGTTaGCCGCCCATTGCACACGGT +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGRRVHS*PPIAHG
Trigger: ACCGTGTGCAATGGGCGGCCAACTATGAACCCTACG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGAGATGTCCAGGCTTaGAGCGTGGGGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARGDVQA*SVGQMD
Trigger: ATCCATCTGCCCCACGCTCCAAGCCTGGACATCTCC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGAGATGTCCAGGCTTaGAGCGTGGGGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGDVQA*SVGQMD
Trigger: ATCCATCTGCCCCACGCTCCAAGCCTGGACATCTCC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTGGCGGGACAAGTCCTaGTGGAATTCGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMWRDKS*WNSSLR
Trigger: CCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTGGCGGGACAAGTCCTaGTGGAATTCGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGWRDKS*WNSSLR
Trigger: CCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCA...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGAGGGCAGGTTGCCCTaGTGTCTGCCCAATGCTAAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKEGRLP*CLPNAK
Trigger: CTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCCGTGTCCAGGACAATaGCGCGGGCCAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAPCPGQ*RGPAQQ
Trigger: CTGCTGAGCTGGCCCGCGTCATTGTCCTGGACACGG...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTGTCAGAGGCGAAGGTaGCATCCGTGTCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARCQRRR*HPCPGQ
Trigger: TTGTCCTGGACACGGATGTCACCTTCGCCTCTGACA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGTCAGAGGCGAAGGTaGCATCCGTGTCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKCQRRR*HPCPGQ
Trigger: TTGTCCTGGACACGGATGTCACCTTCGCCTCTGACA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTCCAGTGGATCACCTTaGGGTCAGACGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKSSGSP*GQTPQS
Trigger: ACTCTGAGGCGTCTGACCTCAAGGTGATCCACTGGA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGAAGACGTAAGGCGTaGGGGCCTGGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGRRKA*GPGPRP
Trigger: TGGCCTTGGCCCAGGCCCTCACGCCTTACGTCTTCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGGGCAGATGGATGGTaGAGGCCTCGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGADGW*RPRAAP
Trigger: TGGTGCTGCCCGAGGCCTTCACCATCCATCTGCCCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGGGCAGATGGATGGTaGAGGCCTCGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGADGW*RPRAAP
Trigger: TGGTGCTGCCCGAGGCCTTCACCATCCATCTGCCCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTCAGCCTCCACATCTaGTCCCAGCCAGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALVSLHI*SQPACR
Trigger: CCGGCAGGCTGGCTGGGAGCAGATGTGGAGGCTGAC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGCACAGTGAGCTGCTaGTGCCGGAACTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKCTVSC*CRNSKQ
Trigger: CTGCTTTGAGTTCCGGCAGCAGCAGCTCACTGTGCA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCAGGAAAGTGACATaGACACGGTGCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKGRKVT*TRCTVS
Trigger: GCTCACTGTGCACCGTGTGCATGTCACTTTCCTGCC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCTGCCTTGCGCCGGCTaGCCAGCCCCAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSLPCAG*PAPAAQ
Trigger: TTGAGCAGCTGGGGCTGGGCAGCCGGCGCAAGGCAG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCGCAGGGTCTCGAATaGCGGCACCACCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAAQGLE*RHHQCC
Trigger: GCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGCGCAGGGTCTCGAATaGCGGCACCACCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALAQGLE*RHHQCC
Trigger: GCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGCATAGTCTGTGGGTaGGTGGCCTCGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGIVCG*VASGPL
Trigger: GAGTGGCCCCGAGGCCACGCACCCACAGACTATGCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTCTCCAGGATGTTTCTaGCCACGGCGTCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARSPGCF*PRRQSP
Trigger: TGGTGACTGACGCCGTGGCCAGAAACATCCTGGAGA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCGTTGAAGATGTCCTaGTCAGCCAGTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARALKMS*SASEVA
Trigger: TGCCACCTCACTGGCTGACCAGGACATCTTCAACGC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCACCAGGTGGGGGCTaGCTGGGGCACACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAAPGGG*LGHTKS
Trigger: GCTCTTTGTGTGCCCCAGCCAGCCCCCACCTGGTGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCACAAGGCCAGGCTCATaGGGCCAGGCCAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSATRPGS*GQASAC
Trigger: GCAGGCACTGGCCTGGCCCCATGAGCCTGGCCTTGT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGACAAGGCCAGGCTCATaGGGCCAGGCCAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALTRPGS*GQASAC
Trigger: GCAGGCACTGGCCTGGCCCCATGAGCCTGGCCTTGT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGCGTAGGGTTCATAGTTaGCCGCCCATTGCACACGGT +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARRRVHS*PPIAHG
Trigger: ACCGTGTGCAATGGGCGGCCAACTATGAACCCTACG...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGAGCGTGGGGCAGATaGATGGTGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGAWGR*MVKASG
Trigger: GCCCGAGGCCTTCACCATCCATCTGCCCCACGCTCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGAGCGTGGGGCAGATaGATGGTGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGAWGR*MVKASG
Trigger: GCCCGAGGCCTTCACCATCCATCTGCCCCACGCTCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGCAGTCACGATAGGTaGGGCTGGAGCGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGSHDR*GWSGSG
Trigger: CCCGCTTCCGCTCCAGCCCCACCTATCGTGACTGCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCAGCAGCCCCATGGTaGCGGGACAAGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAAAAPW*RDKSWW
Trigger: CCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCCGTGTCCAGGACAATaGCGCGGGCCAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSPCPGQ*RGPAQQ
Trigger: CTGCTGAGCTGGCCCGCGTCATTGTCCTGGACACGG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGTCCTGGTCAGCCAGTaGGGTGGCAGGCAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAVLVSQ*GGRQAK
Trigger: CTTAGCCTGCCTGCCACCTCACTGGCTGACCAGGAC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTCCTGGTCAGCCAGTaGGGTGGCAGGCAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALVLVSQ*GGRQAK
Trigger: CTTAGCCTGCCTGCCACCTCACTGGCTGACCAGGAC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCCGAAGCTTCTTTGGTaGGTTCCAGTGGATCACCTT +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGPKLLW*VPVDHL
Trigger: AAGGTGATCCACTGGAACTCACCAAAGAAGCTTCGG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCACACGGTGCACAGTaGGCTGCTGCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAAHGAQ*AAAAGT
Trigger: AGTTCCGGCAGCAGCAGCTCACTGTGCACCGTGTGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGAAATGCAGGAACTGCTaGGCTTCTGCGTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARKCRNC*ASASVR
Trigger: CCTGACAGACGCAGAAGCTCAGCAGTTCCTGCATTT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGAAGACGTAAGGCGTaGGGGCCTGGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGRRKA*GPGPRP
Trigger: TGGCCTTGGCCCAGGCCCTCACGCCTTACGTCTTCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGGGCAGATGGATGGTaGAGGCCTCGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGADGW*RPRAAP
Trigger: TGGTGCTGCCCGAGGCCTTCACCATCCATCTGCCCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGGCTGGGAGGTATTTaGGGGCAGCAGCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGLGGI*GQQPHG
Trigger: ACCATGGGGCTGCTGCCCTCAAATACCTCCCAGCCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGGCTGGGAGGTATTTaGGGGCAGCAGCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGLGGI*GQQPHG
Trigger: ACCATGGGGCTGCTGCCCTCAAATACCTCCCAGCCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGAGGAGCTCATATTCCTaGAGGTGTAGAGAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKRSSYS*RCRECP
Trigger: CGGGCACTCTCTACACCTTCAGGAATATGAGCTCCT...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531847.1
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGTCAGCCTCCACATCTaGTCCCAGCCAGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSVSLHI*SQPACR
Trigger: CCGGCAGGCTGGCTGGGAGCAGATGTGGAGGCTGAC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCACACAAGGCAGACGCTaGACTAGCCCCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSATQGRR*TSPGCS
Trigger: GGAGCACCCGGGGCTAGTGCAGCGTCTGCCTTGTGT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGCATAGTCTGTGGGTaGGTGGCCTCGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGIVCG*VASGPL
Trigger: GAGTGGCCCCGAGGCCACGCACCCACAGACTATGCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCTGGCGGAGGGCAGGTTaGCCTGGTGTCTGCCCAATG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAWRRAG*PGVCPM
Trigger: CATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCA...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTGGCGGAGGGCAGGTTaGCCTGGTGTCTGCCCAATG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALWRRAG*PGVCPM
Trigger: CATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGCCCCGCACACACGATaGCCACATGCAAGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALAPHTR*PHARAR
Trigger: GCGAGCTCTTGCATGTGGCCATCGTGTGTGCGGGGC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGGATCCAGGAGACCTaGGGCTTGAGCTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGIQET*GLSWSA
Trigger: TGCCGACCAGCTCAAGCCCCAGGTCTCCTGGATCCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGGATCCAGGAGACCTaGGGCTTGAGCTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGIQET*GLSWSA
Trigger: TGCCGACCAGCTCAAGCCCCAGGTCTCCTGGATCCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTACAAGGCCAGGCTCATaGGGCCAGGCCAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSTRPGS*GQASAC
Trigger: GCAGGCACTGGCCTGGCCCCATGAGCCTGGCCTTGT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCGGGGACAGTCTCGTaGCACCACCACGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAAGTVS*HHHVGF
Trigger: GAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGCGGGGACAGTCTCGTaGCACCACCACGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALAGTVS*HHHVGF
Trigger: GAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGAGGAGCTCATATTCCTaGGCATCCAGCTCCACAATG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMRSSYS*ASSSTM
Trigger: CATTGTGGAGCTGGATGCCCAGGAATATGAGCTCCT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGAGCGTGGGGCAGATaGATGGTGAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGAWGR*MVKASG
Trigger: GCCCGAGGCCTTCACCATCCATCTGCCCCACGCTCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTAGGGCAGCAGCCCCATaGTGGCGGGACAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSRAAAP*WRDKSW
Trigger: CCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGCCGAAGCTTCTTTGGTaGGTTCCAGTGGATCACCTT +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKPKLLW*VPVDHL
Trigger: AAGGTGATCCACTGGAACTCACCAAAGAAGCTTCGG...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGCAGCAAGCACTGGTaGGGCCTCGACGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGSKHW*GLDEMQ
Trigger: CTGCATTTCGTCGAGGCCTCACCAGTGCTTGCTGCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTGGAATGGGGGAAGCTaGAGCGGTAGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALWNGGS*SGSAGS
Trigger: AGACCCTGCGCTACCGCTTCAGCTTCCCCCATTCCA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCCACTCGTGGTACCTaGAGGTGTAGAGAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAATRGT*RCRECP
Trigger: CGGGCACTCTCTACACCTTCAGGTACCACGAGTGGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGGCTGGGAGGTATTTaGGGGCAGCAGCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGLGGI*GQQPHG
Trigger: ACCATGGGGCTGCTGCCCTCAAATACCTCCCAGCCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTCTCGGCTGGAGTTATaGCCCGCACACACGATGGCC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALSRLEL*PAHTMA
Trigger: GGCCATCGTGTGTGCGGGGCATAACTCCAGCCGAGA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGCCAGGCCAGTGCCTaGACAGGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGQASA*TGLPTS
Trigger: AGATGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGCCAGGCCAGTGCCTaGACAGGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGQASA*TGLPTS
Trigger: AGATGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTGGCGGAGGGCAGGTTaGCCTGGTGTCTGCCCAATG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSWRRAG*PGVCPM
Trigger: CATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGACCCCACAGATGCTCTaGCCCAGCCCTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALTPQML*PSPSQR
Trigger: TCTCTGGGAAGGGCTGGGGCAGAGCATCTGTGGGGT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCCGCACACACGATaGCCACATGCAAGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSAPHTR*PHARAR
Trigger: GCGAGCTCTTGCATGTGGCCATCGTGTGTGCGGGGC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGGATCCAGGAGACCTaGGGCTTGAGCTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGIQET*GLSWSA
Trigger: TGCCGACCAGCTCAAGCCCCAGGTCTCCTGGATCCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGGGGTGGCGGTTCATaGGGCAGGAAAGTGACATGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGGGGS*GRKVTC
Trigger: GCATGTCACTTTCCTGCCCCATGAACCGCCACCCCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCATGGGGCAGGAAAGTaGCATGCACACGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAHGAGK*HAHGAQ
Trigger: CTGTGCACCGTGTGCATGTCACTTTCCTGCCCCATG...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCACTCGTGGTACCTaGAGGTGTAGAGAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSATRGT*RCRECP
Trigger: CGGGCACTCTCTACACCTTCAGGTACCACGAGTGGC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCACACGATGGCCACATaGAAGAGCTCGCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAHTMAT*KSSHLG
Trigger: GCCCAAGTGCGAGCTCTTGCATGTGGCCATCGTGTG...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTCTCGGCTGGAGTTATaGCCCGCACACACGATGGCC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSSRLEL*PAHTMA
Trigger: GGCCATCGTGTGTGCGGGGCATAACTCCAGCCGAGA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCAGTTGTGCCAGGGCCTaGTGCAACTGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSASCARA*CNCSAP
Trigger: TGGTGCTGAGCAGTTGCAGCAGGCCCTGGCACAACT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGACAGTGAGCTGCTGCTaGCGGAACTCAAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALTVSCC*RNSKQG
Trigger: CCCCTGCTTTGAGTTCCGGCAGCAGCAGCTCACTGT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCACAGTGAGCTGCTGCTaGCGGAACTCAAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSATVSCC*RNSKQG
Trigger: CCCCTGCTTTGAGTTCCGGCAGCAGCAGCTCACTGT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCGGTGCACAGTGAGCTaGTGCTGCCGGAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSARCTVS*CCRNSK
Trigger: CTTTGAGTTCCGGCAGCAGCAGCTCACTGTGCACCG...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTACCCCACAGATGCTCTaGCCCAGCCCTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSTPQML*PSPSQR
Trigger: TCTCTGGGAAGGGCTGGGGCAGAGCATCTGTGGGGT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGCAAGTGGAGGTGCAGTaGATTTTTCCTGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGQVEVQ*IFPVEE
Trigger: CTCTTCTACAGGAAAAATCCACTGCACCTCCACTTG...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGCAAGTGGAGGTGCAGTaGATTTTTCCTGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMQVEVQ*IFPVEE
Trigger: CTCTTCTACAGGAAAAATCCACTGCACCTCCACTTG...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGCGGAGTAGTGCTTGTTaGGGATCCAGGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALRSSAC*GSRRPG
Trigger: CCCAGGTCTCCTGGATCCCCAACAAGCACTACTCCG...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCGGAGTAGTGCTTGTTaGGGATCCAGGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSARSSAC*GSRRPG
Trigger: CCCAGGTCTCCTGGATCCCCAACAAGCACTACTCCG...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTTTGGTGAGTTCCAGTaGATCACCTTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARFGEFQ*ITLRSD
Trigger: GTCTGACCTCAAGGTGATCCACTGGAACTCACCAAA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTTTGGTGAGTTCCAGTaGATCACCTTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKFGEFQ*ITLRSD
Trigger: GTCTGACCTCAAGGTGATCCACTGGAACTCACCAAA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGGAGATGTCCAGGCTTaGAGCGTGGGGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALGDVQA*SVGQMD
Trigger: ATCCATCTGCCCCACGCTCCAAGCCTGGACATCTCC...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCACGATAGGTGGGGCTaGAGCGGAAGCGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSHDRWG*SGSGRC
Trigger: ACATCTCCCGCTTCCGCTCCAGCCCCACCTATCGTG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGCGGGACAAGTCCTGGTaGAATTCGTCCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALRDKSW*NSSLRA
Trigger: GGCCCTCAAGGACGAATTCCACCAGGACTTGTCCCG...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGAGGGCAGGTTGCCCTaGTGTCTGCCCAATGCTAAG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAEGRLP*CLPNAK
Trigger: CTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTCCAGTGGATCACCTTaGGGTCAGACGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALSSGSP*GQTPQS
Trigger: ACTCTGAGGCGTCTGACCTCAAGGTGATCCACTGGA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCATGGGGCAGGAAAGTaGCATGCACACGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSHGAGK*HAHGAQ
Trigger: CTGTGCACCGTGTGCATGTCACTTTCCTGCCCCATG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGAGGTCAGGTAGAAATTaGGGAAGAATTCCACATGCT +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMRSGRN*GRIPHA
Trigger: AGCATGTGGAATTCTTCCGCAATTTCTACCTGACCT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGAGGTCAGGTAGAAATTaGGGAAGAATTCCACATGCT +
Preference number: 4 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGRSGRN*GRIPHA
Trigger: AGCATGTGGAATTCTTCCGCAATTTCTACCTGACCT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTTCCTCGTCCAGTTGTaGCAGGGCCTGCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSFLVQL*QGLLQL
Trigger: CAGTTGCAGCAGGCCCTGGCACAACTGGACGAGGAA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTGCACAGTGAGCTGCTaGTGCCGGAACTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALCTVSC*CRNSKQ
Trigger: CTGCTTTGAGTTCCGGCAGCAGCAGCTCACTGTGCA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGGCAGGAAAGTGACATaGACACGGTGCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAGRKVT*TRCTVS
Trigger: GCTCACTGTGCACCGTGTGCATGTCACTTTCCTGCC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGCAAGTGGAGGTGCAGTaGATTTTTCCTGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKQVEVQ*IFPVEE
Trigger: CTCTTCTACAGGAAAAATCCACTGCACCTCCACTTG...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTCTCCAGGATGTTTCTaGCCACGGCGTCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALSPGCF*PRRQSP
Trigger: TGGTGACTGACGCCGTGGCCAGAAACATCCTGGAGA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCTCTCCAGGATGTTTCTaGCCACGGCGTCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSASPGCF*PRRQSP
Trigger: TGGTGACTGACGCCGTGGCCAGAAACATCCTGGAGA...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCGGAGTAGTGCTTGTTaGGGATCCAGGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSRSSAC*GSRRPG
Trigger: CCCAGGTCTCCTGGATCCCCAACAAGCACTACTCCG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCGTTGAAGATGTCCTaGTCAGCCAGTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAALKMS*SASEVA
Trigger: TGCCACCTCACTGGCTGACCAGGACATCTTCAACGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCGTAGGGTTCATAGTTaGCCGCCCATTGCACACGGT +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSARRVHS*PPIAHG
Trigger: ACCGTGTGCAATGGGCGGCCAACTATGAACCCTACG...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTCCAGGCTTGGAGCGTaGGGCAGATGGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSSRLGA*GRWMVK
Trigger: CTTCACCATCCATCTGCCCCACGCTCCAAGCCTGGA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGAGATGTCCAGGCTTaGAGCGTGGGGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGDVQA*SVGQMD
Trigger: ATCCATCTGCCCCACGCTCCAAGCCTGGACATCTCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCTGGCGGGACAAGTCCTaGTGGAATTCGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAWRDKS*WNSSLR
Trigger: CCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCA...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGAGGGCAGGTTGCCCTaGTGTCTGCCCAATGCTAAG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSEGRLP*CLPNAK
Trigger: CTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGATAAACAATTCAAGATaGGGGAACCAGCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMINNSR*GNQPQT
Trigger: AGTTTGGGGCTGGTTCCCCCATCTTGAATTGTTTAT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCGGCATGATAAAAGCTaGCACGGACAGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSRHDKS*HGQQAP
Trigger: TGGTGCCTGCTGTCCGTGTCAGCTTTTATCATGCCG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTGTCAGAGGCGAAGGTaGCATCCGTGTCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSCQRRR*HPCPGQ
Trigger: TTGTCCTGGACACGGATGTCACCTTCGCCTCTGACA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTCCAGTGGATCACCTTaGGGTCAGACGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSSSGSP*GQTPQS
Trigger: ACTCTGAGGCGTCTGACCTCAAGGTGATCCACTGGA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGAAATGCAGGAACTGCTaGGCTTCTGCGTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALKCRNC*ASASVR
Trigger: CCTGACAGACGCAGAAGCTCAGCAGTTCCTGCATTT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTGCACAGTGAGCTGCTaGTGCCGGAACTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSCTVSC*CRNSKQ
Trigger: CTGCTTTGAGTTCCGGCAGCAGCAGCTCACTGTGCA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGGCAGGAAAGTGACATaGACACGGTGCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSGRKVT*TRCTVS
Trigger: GCTCACTGTGCACCGTGTGCATGTCACTTTCCTGCC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCGTTGAAGATGTCCTaGTCAGCCAGTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSALKMS*SASEVA
Trigger: TGCCACCTCACTGGCTGACCAGGACATCTTCAACGC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTGGCGGGACAAGTCCTaGTGGAATTCGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSWRDKS*WNSSLR
Trigger: CCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGATAAACAATTCAAGATaGGGGAACCAGCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: QTGWGRERPVPSHTIAARINNSR*GNQPQT
Trigger: AGTTTGGGGCTGGTTCCCCCATCTTGAATTGTTTAT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CCA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGATAAACAATTCAAGATaGGGGAACCAGCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKINNSR*GNQPQT
Trigger: AGTTTGGGGCTGGTTCCCCCATCTTGAATTGTTTAT...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR TCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGCCGAAGCTTCTTTGGTaGGTTCCAGTGGATCACCTT +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALPKLLW*VPVDHL
Trigger: AAGGTGATCCACTGGAACTCACCAAAGAAGCTTCGG...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR TCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTAAATGCAGGAACTGCTaGGCTTCTGCGTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSKCRNC*ASASVR
Trigger: CCTGACAGACGCAGAAGCTCAGCAGTTCCTGCATTT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCGTCAGTCACCAAGTaGAGGTGCAGTGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAASVTK*RCSGFF
Trigger: GAAAAATCCACTGCACCTCCACTTGGTGACTGACGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGAGGAGCTCATATTCCTaGGCATCCAGCTCCACAATG +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALRSSYS*ASSSTM
Trigger: CATTGTGGAGCTGGATGCCCAGGAATATGAGCTCCT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCGTCAGTCACCAAGTaGAGGTGCAGTGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSASVTK*RCSGFF
Trigger: GAAAAATCCACTGCACCTCCACTTGGTGACTGACGC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTAGGAGCTCATATTCCTaGGCATCCAGCTCCACAATG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSRSSYS*ASSSTM
Trigger: CATTGTGGAGCTGGATGCCCAGGAATATGAGCTCCT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTTTGGTGAGTTCCAGTaGATCACCTTGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSFGEFQ*ITLRSD
Trigger: GTCTGACCTCAAGGTGATCCACTGGAACTCACCAAA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGAGGTCAGGTAGAAATTaGGGAAGAATTCCACATGCT +
Preference number: 4 (lower is better)
Translates to: PETLNNLNSRDGGGQVALRSGRN*GRIPHA
Trigger: AGCATGTGGAATTCTTCCGCAATTTCTACCTGACCT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTCAAGTGGAGGTGCAGTaGATTTTTCCTGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSQVEVQ*IFPVEE
Trigger: CTCTTCTACAGGAAAAATCCACTGCACCTCCACTTG...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CCA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCATAAACAATTCAAGATaGGGGAACCAGCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAINNSR*GNQPQT
Trigger: AGTTTGGGGCTGGTTCCCCCATCTTGAATTGTTTAT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR GCA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTAGGTCAGGTAGAAATTaGGGAAGAATTCCACATGCT +
Preference number: 4 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSRSGRN*GRIPHA
Trigger: AGCATGTGGAATTCTTCCGCAATTTCTACCTGACCT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS TCA 90 bp AGGGAGGGACGCGACCCGGGGCTGCAGGCTCCATCGCAGGCCCCTTaGCGTTCCTTCTGGCAGCGGAGCCTCCCAGGGCTGGCTAGCACT +
Preference number: 5 (lower is better)
Translates to: REGRDPGLQAPSQAP*RSFWQRSLPGLAST
Trigger: AGTGCTAGCCAGCCCTGGGAGGCTCCGCTGCCAGAAGGAACGTCAAGGGGCCTGCGATGGAGCCTGCAGCCCCGGGTCGCGTCCCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529052.5
ENST00000531526.5
CDS GCA 90 bp GAAGCTGAAGCGGTAGCGCAGGGTCTCGAATGCCGGCACCACCAGTaGTGCCTTGCGCCGGCTGCCCAGCCCCAGCTGCTCAATGGAGGC +
Preference number: 5 (lower is better)
Translates to: EAEAVAQGLECRHHQ*CLAPAAQPQLLNGG
Trigger: GCCTCCATTGAGCAGCTGGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGCTACCGCTTCAGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS TCA 90 bp TGCCACACCCCACCCGGCAAGGCTTCCTCAGACCTGGTCAGCCAGTaGGGTGGCAGGCAGGCTAAGGAGCTCCCGCCTGGCTGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: CHTPPGKASSDLVSQ*GGRQAKELPPGCQP
Trigger: AGGCTGACAGCCAGGCGGGAGCTCCTTAGCCTGCCTGCCACCTCACTGGCTGACCAGGTCTGAGGAAGCCTTGCCGGGTGGGGTGTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS TCA 90 bp CCGATCGCCTGCGTGTCTGGGAGGGGAGGGCATAAGGGAGCTGTCTaGAGCTGCCACAGGACCTGGGCTCAGGGCTGGATGCAGGGATCC +
Preference number: 5 (lower is better)
Translates to: PIACVSGRGGHKGAV*SCHRTWAQGWMQGS
Trigger: GGATCCCTGCATCCAGCCCTGAGCCCAGGTCCTGTGGCAGCTTCAGACAGCTCCCTTATGCCCTCCCCTCCCAGACACGCAGGCGATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414027.2
CDS CCA 90 bp CATAGCGGGGACAGTCTCGTGGCACCACCACGTAGGGTTCATAGTTaGCCGCCCATTGCACACGGTACGGGGCCTGAGCCTCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: HSGDSLVAPPRRVHS*PPIAHGTGPEPPAS
Trigger: GCTGGCGGGAGGCTCAGGCCCCGTACCGTGTGCAATGGGCGGCCAACTATGAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS-3UTR CAA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTGCAAGAGCTCGCACTaGGGCGGCGGCGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGCKSSH*GGGGGC
Trigger: GCAGCCGCCGCCGCCGCCCAAGTGCGAGCTCTTGCA...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTGCAAGAGCTCGCACTaGGGCGGCGGCGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMCKSSH*GGGGGC
Trigger: GCAGCCGCCGCCGCCGCCCAAGTGCGAGCTCTTGCA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGACCACCAGTGCTGCCTaGCGCCGGCTGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGTTSAA*RRLPSP
Trigger: GGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS CCA 90 bp TGGGGCTGCTGCAGGGCTGGGAGGTATTTGAGGGCAGCAGCCCCATaGTGGCGGGACAAGTCCTGGTGGAATTCGTCCTTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: WGCCRAGRYLRAAAP*WRDKSWWNSSLRAW
Trigger: CCAGGCCCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCTCAAATACCTCCCAGCCCTGCAGCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CAA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGCAAGAGCTCGCACTaGGGCGGCGGCGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKCKSSH*GGGGGC
Trigger: GCAGCCGCCGCCGCCGCCCAAGTGCGAGCTCTTGCA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGACCACCAGTGCTGCCTaGCGCCGGCTGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: QTGWGRERPVPSHTIAARTTSAA*RRLPSP
Trigger: GGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS GCA 90 bp TCTGCGTCTGTCAGGTACAAGGCCAGGCTCATGGGGCCAGGCCAGTaGCTGCACAGGGCTTCCAACATCTGCAGCCGGTCCATGGACAGC +
Preference number: 5 (lower is better)
Translates to: SASVRYKARLMGPGQ*LHRASNICSRSMDS
Trigger: GCTGTCCATGGACCGGCTGCAGATGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCCCCATGAGCCTGGCCTTGTACCTGACAGACGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS TCA 90 bp GGAAGCGGGAGATGTCCAGGCTTGGAGCGTGGGGCAGATGGATGGTaGAGGCCTCGGGCAGCACCAGGAGCTCATATTCCTGGGCATCCA +
Preference number: 5 (lower is better)
Translates to: GSGRCPGLERGADGW*RPRAAPGAHIPGHP
Trigger: TGGATGCCCAGGAATATGAGCTCCTGGTGCTGCCCGAGGCCTTCACCATCCATCTGCCCCACGCTCCAAGCCTGGACATCTCCCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 90 bp GGAACTGCTGAGCTTCTGCGTCTGTCAGGTACAAGGCCAGGCTCATaGGGCCAGGCCAGTGCCTGCACAGGGCTTCCAACATCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GTAELLRLSGTRPGS*GQASACTGLPTSAA
Trigger: GGCTGCAGATGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCCCCATGAGCCTGGCCTTGTACCTGACAGACGCAGAAGCTCAGCAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS TCA 90 bp CGGGCAGCAAGCACTGGTGAGGCCTCGACGAAATGCAGGAACTGCTaGGCTTCTGCGTCTGTCAGGTACAAGGCCAGGCTCATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RAASTGEASTKCRNC*ASASVRYKARLMGP
Trigger: TGGCCCCATGAGCCTGGCCTTGTACCTGACAGACGCAGAAGCTCAGCAGTTCCTGCATTTCGTCGAGGCCTCACCAGTGCTTGCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 90 bp CCAGCCGAAGCCCACAAAGCGAGGATCATAGCGGGGACAGTCTCGTaGCACCACCACGTAGGGTTCATAGTTGGCCGCCCATTGCACACG +
Preference number: 5 (lower is better)
Translates to: PAEAHKARIIAGTVS*HHHVGFIVGRPLHT
Trigger: CGTGTGCAATGGGCGGCCAACTATGAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGCTATGATCCTCGCTTTGTGGGCTTCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 90 bp TTCTTTGGTGAGTTCCAGTGGATCACCTGGGACCCAGGAGGGTGTTaGGGCCATGGGAGCAGGGAGCAGAAGTCTCCATCCATGGCCCCC +
Preference number: 5 (lower is better)
Translates to: FFGEFQWITWDPGGC*GHGSREQKSPSMAP
Trigger: GGGGGCCATGGATGGAGACTTCTGCTCCCTGCTCCCATGGCCCCAACACCCTCCTGGGTCCCAGGTGATCCACTGGAACTCACCAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530437.5
CDS-3UTR CAA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGACGTTGCGAAGCTGGTaGACGGGGTATAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGTLRSW*TGYRGP
Trigger: GGGGCCCCTATACCCCGTCAACCAGCTTCGCAACGT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGACGTTGCGAAGCTGGTaGACGGGGTATAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMTLRSW*TGYRGP
Trigger: GGGGCCCCTATACCCCGTCAACCAGCTTCGCAACGT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGGGCCAAGGCCACGTaGCGAAGCTGGTTGACGGGG +
Preference number: 5 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKWAKAT*RSWLTG
Trigger: CCCCGTCAACCAGCTTCGCAACGTGGCCTTGGCCCA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTGGGCCAAGGCCACGTaGCGAAGCTGGTTGACGGGG +
Preference number: 5 (lower is better)
Translates to: QTGWGRERPVPSHTIAARWAKAT*RSWLTG
Trigger: CCCCGTCAACCAGCTTCGCAACGTGGCCTTGGCCCA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS TCA 90 bp GTACACCACATGGTAGGCCACGTCCTGCCGGGCAGCAAGCACTGGTaGGGCCTCGACGAAATGCAGGAACTGCTGAGCTTCTGCGTCTGT +
Preference number: 5 (lower is better)
Translates to: VHHMVGHVLPGSKHW*GLDEMQELLSFCVC
Trigger: ACAGACGCAGAAGCTCAGCAGTTCCTGCATTTCGTCGAGGCCTCACCAGTGCTTGCTGCCCGGCAGGACGTGGCCTACCATGTGGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS TCA 90 bp GGAAGCGGGAGATGTCCAGGCTTGGAGCGTGGGGCAGATGGATGGTaGAGGCCTCGGGCAGCACCAGGAGCTCATATTCCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: GSGRCPGLERGADGW*RPRAAPGAHIPEGV
Trigger: TACACCTTCAGGAATATGAGCTCCTGGTGCTGCCCGAGGCCTTCACCATCCATCTGCCCCACGCTCCAAGCCTGGACATCTCCCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531847.1
CDS CCA 90 bp GCCAGTGACACTCATCAGGGCATTAGCCACAGGACTAGACCACCATaGGCCATCTTGCCTGATGCGACGGGTGGGCACAACCACAGGTGG +
Preference number: 5 (lower is better)
Translates to: ASDTHQGISHRTRPP*AILPDATGGHNHRW
Trigger: CCACCTGTGGTTGTGCCCACCCGTCGCATCAGGCAAGATGGCCCATGGTGGTCTAGTCCTGTGGCTAATGCCCTGATGAGTGTCACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS-3UTR CAA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGGTCTTCCTCGTCCAGTaGTGCCAGGGCCTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGVFLVQ*CQGLLQ
Trigger: TTGCAGCAGGCCCTGGCACAACTGGACGAGGAAGAC...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGACCACCAGTGCTGCCTaGCGCCGGCTGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PETLNNLNSRDGGGQVALTTSAA*RRLPSP
Trigger: GGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGATAGTTGGCCGCCCATaGCACACGGTACGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKIVGRP*HTVRGL
Trigger: CAGGCCCCGTACCGTGTGCAATGGGCGGCCAACTAT...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS GCA 90 bp AAGAGCATGGACTTCACCAGGGTGATGACGTCTCGGCTGGAGTTATaGCCCGCACACACGATGGCCACATGCAAGAGCTCGCACTTGGGC +
Preference number: 5 (lower is better)
Translates to: KSMDFTRVMTSRLEL*PAHTMATCKSSHLG
Trigger: GCCCAAGTGCGAGCTCTTGCATGTGGCCATCGTGTGTGCGGGGCATAACTCCAGCCGAGACGTCATCACCCTGGTGAAGTCCATGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS GCA 90 bp CTCATCAGGGCATTAGCCACAGGACTAGACCACCATGGGCCATCTTaGCTGATGCGACGGGTGGGCACAACCACAGGTGGAGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LIRALATGLDHHGPS*LMRRVGTTTGGAAV
Trigger: AACAGCAGCTCCACCTGTGGTTGTGCCCACCCGTCGCATCAGGCAAGATGGCCCATGGTGGTCTAGTCCTGTGGCTAATGCCCTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS-3UTR CAA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGAGCCCCGGGTGCTCCTaGATCACAGCGTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMSPGCS*ITALKM
Trigger: CATCTTCAACGCTGTGATCAAGGAGCACCCGGGGCT...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTCTTCCTCGTCCAGTaGTGCCAGGGCCTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKVFLVQ*CQGLLQ
Trigger: TTGCAGCAGGCCCTGGCACAACTGGACGAGGAAGAC...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTACCACCAGTGCTGCCTaGCGCCGGCTGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSTTSAA*RRLPSP
Trigger: GGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGGCCAACAGCTCCACCTaGGAATGGGGGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMANSST*EWGKLK
Trigger: CTTCAGCTTCCCCCATTCCAAGGTGGAGCTGTTGGC...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGTGGTGGAATTCGTCCTaGAGGGCCTGGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGWWNSS*RAWRQS
Trigger: TGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCA...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CAA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTGGTGGAATTCGTCCTaGAGGGCCTGGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMWWNSS*RAWRQS
Trigger: TGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGCCAACAGCTCCACCTaGGAATGGGGGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QTGWGRERPVPSHTIAARANSST*EWGKLK
Trigger: CTTCAGCTTCCCCCATTCCAAGGTGGAGCTGTTGGC...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp AACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGGGACAATGTGGGCCACTTaGTTCCAGCCGAAGCCCACA +
Preference number: 5 (lower is better)
Translates to: NWLGQRETSPQPYNSSKGTMWAT*FQPKPT
Trigger: TGTGGGCTTCGGCTGGAACAAAGTGGCCCACATTGT...CCCCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGTGGTGGAATTCGTCCTaGAGGGCCTGGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: QTGWGRERPVPSHTIAARWWNSS*RAWRQS
Trigger: TGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCA...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CAA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGTGGTGGAATTCGTCCTaGAGGGCCTGGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKWWNSS*RAWRQS
Trigger: TGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCA...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
ENST00000531847.1
CDS-3UTR CAA 90 bp ATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATGTCCTTGATCACAGCGTaGAAGATGTCCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: IAGMAEGRLPWCLPNAKMSLITA*KMSWSA
Trigger: GGCTGACCAGGACATCTTCAACGCTGTGATCAAGGA...CATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTGGGCCAAGGCCACGTaGCGAAGCTGGTTGACGGGG +
Preference number: 5 (lower is better)
Translates to: PETLNNLNSRDGGGQVALWAKAT*RSWLTG
Trigger: CCCCGTCAACCAGCTTCGCAACGTGGCCTTGGCCCA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGGACAATGTGGGCCACTTaGTTCCAGCCGAAGCCCACA +
Preference number: 5 (lower is better)
Translates to: QTGWGRERPVPSHTIAARTMWAT*FQPKPT
Trigger: TGTGGGCTTCGGCTGGAACAAAGTGGCCCACATTGT...CCTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAAACTGGCTGGGGCAGAGAGAGACCAGTCCCCAGCCATACAATAGCAGCAAGACAATGTGGGCCACTTaGTTCCAGCCGAAGCCCACA +
Preference number: 5 (lower is better)
Translates to: PNWLGQRETSPQPYNSSKTMWAT*FQPKPT
Trigger: TGTGGGCTTCGGCTGGAACAAAGTGGCCCACATTGT...CTTGCTGCTATTGTATGGCTGGGGACTGGTCTCTCTCTGCCCCAGCCAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGACGTTGCGAAGCTGGTaGACGGGGTATAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PETLNNLNSRDGGGQVALTLRSW*TGYRGP
Trigger: GGGGCCCCTATACCCCGTCAACCAGCTTCGCAACGT...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCATAGTTGGCCGCCCATaGCACACGGTACGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAIVGRP*HTVRGL
Trigger: CAGGCCCCGTACCGTGTGCAATGGGCGGCCAACTAT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTATAGTTGGCCGCCCATaGCACACGGTACGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSIVGRP*HTVRGL
Trigger: CAGGCCCCGTACCGTGTGCAATGGGCGGCCAACTAT...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCAGCCCCGGGTGCTCCTaGATCACAGCGTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: LNNLNSRDGGGQVALVSASPGCS*ITALKM
Trigger: CATCTTCAACGCTGTGATCAAGGAGCACCCGGGGCT...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCGCCAACAGCTCCACCTaGGAATGGGGGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAANSST*EWGKLK
Trigger: CTTCAGCTTCCCCCATTCCAAGGTGGAGCTGTTGGC...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCTGGTGGAATTCGTCCTaGAGGGCCTGGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAWWNSS*RAWRQS
Trigger: TGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCA...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTTCCAGTGGATCACCTaGAGGTCAGACGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PETLNNLNSRDGGGQVALFQWIT*RSDASE
Trigger: CTCTGAGGCGTCTGACCTCAAGGTGATCCACTGGAA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp TTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCTTCCAGTGGATCACCTaGAGGTCAGACGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LNNLNSRDGGGQVALVSAFQWIT*RSDASE
Trigger: CTCTGAGGCGTCTGACCTCAAGGTGATCCACTGGAA...GGCAGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTGCCAACAGCTCCACCTaGGAATGGGGGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSANSST*EWGKLK
Trigger: CTTCAGCTTCCCCCATTCCAAGGTGGAGCTGTTGGC...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp CCAGAGACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGTCCTTGATCACAGCGTaGAAGATGTCCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PETLNNLNSRDGGGQVALSLITA*KMSWSA
Trigger: GGCTGACCAGGACATCTTCAACGCTGTGATCAAGGA...CAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS-3UTR CAA 90 bp ACCTTAAATAATTTAAATAGCAGGGATGGCGGAGGGCAGGTTGCCCTGGTGTCTTTCCAGTGGATCACCTaGAGGTCAGACGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TLNNLNSRDGGGQVALVSFQWIT*RSDASE
Trigger: CTCTGAGGCGTCTGACCTCAAGGTGATCCACTGGAA...AGACACCAGGGCAACCTGCCCTCCGCCATCCCTGCTATTTAAATTATTTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS CCA 72 bp TCCGTCGAGGGCGGCGGCTCTCCGCAGCCTCCCGTCTaGGGGGACACGTGGCATGAGCGGGCCGGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: SVEGGGSPQPPV*GDTWHERAGEA
Trigger: TGCTTCCCCGGCCCGCTCATGCCACGTGTCCCCCCAGACGGGAGGCTGCGGAGAGCCGCCGCCCTCGACGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000531526.5
CDS TCA 72 bp CGCGACCCGGGGCTGCAGGCTCCATCGCAGGCCCCTTaGCGTTCCTTCTGGCAGCGGAGCCTCCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: RDPGLQAPSQAP*RSFWQRSLPGL
Trigger: CAGCCCTGGGAGGCTCCGCTGCCAGAAGGAACGTCAAGGGGCCTGCGATGGAGCCTGCAGCCCCGGGTCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529052.5
ENST00000531526.5
CDS GCA 72 bp GCGGTAGCGCAGGGTCTCGAATGCCGGCACCACCAGTaGTGCCTTGCGCCGGCTGCCCAGCCCCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: AVAQGLECRHHQ*CLAPAAQPQLL
Trigger: GAGCAGCTGGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGCTACCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CAA 72 bp ACGCGACCCGGGGCTGCAGGCTCCATCGCAGGCCCCTaGACGTTCCTTCTGGCAGCGGAGCCTCCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TRPGAAGSIAGP*TFLLAAEPPRA
Trigger: AGCCCTGGGAGGCTCCGCTGCCAGAAGGAACGTCAAGGGGCCTGCGATGGAGCCTGCAGCCCCGGGTCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529052.5
ENST00000531526.5
CDS CAA 72 bp CGCAGGGTCTCGAATGCCGGCACCACCAGTGCTGCCTaGCGCCGGCTGCCCAGCCCCAGCTGCTCAATGGAG +
Preference number: 6 (lower is better)
Translates to: RRVSNAGTTSAA*RRLPSPSCSME
Trigger: CTCCATTGAGCAGCTGGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS TCA 72 bp AGGGCAGGTTGCCCTGGTGTCTGCCCAATGCTAAGATaGGGGGCAGCGCCGGCCCAGCCTCAGCCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: RAGCPGVCPMLR*GAAPAQPQPRA
Trigger: TGCCCGAGGCTGAGGCTGGGCCGGCGCTGCCCCTCATCTTAGCATTGGGCAGACACCAGGGCAACCTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
ENST00000531847.1
CDS TCA 72 bp CCACCCGGCAAGGCTTCCTCAGACCTGGTCAGCCAGTaGGGTGGCAGGCAGGCTAAGGAGCTCCCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PPGKASSDLVSQ*GGRQAKELPPG
Trigger: GCCAGGCGGGAGCTCCTTAGCCTGCCTGCCACCTCACTGGCTGACCAGGTCTGAGGAAGCCTTGCCGGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS GCA 72 bp GTAGCGCAGGGTCTCGAATGCCGGCACCACCAGTGCTaGCTTGCGCCGGCTGCCCAGCCCCAGCTGCTCAAT +
Preference number: 6 (lower is better)
Translates to: VAQGLECRHHQC*LAPAAQPQLLN
Trigger: ATTGAGCAGCTGGGGCTGGGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS GCA 72 bp ATGGGGGAAGCTGAAGCGGTAGCGCAGGGTCTCGAATaGCGGCACCACCAGTGCTGCCTTGCGCCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: MGEAEAVAQGLE*RHHQCCLAPAA
Trigger: GGCAGCCGGCGCAAGGCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGCTACCGCTTCAGCTTCCCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CAA 72 bp TGGCACCACCACGTAGGGTTCATAGTTGGCCGCCCATaGCACACGGTACGGGGCCTGAGCCTCCCGCCAGCG +
Preference number: 6 (lower is better)
Translates to: WHHHVGFIVGRP*HTVRGLSLPPA
Trigger: CGCTGGCGGGAGGCTCAGGCCCCGTACCGTGTGCAATGGGCGGCCAACTATGAACCCTACGTGGTGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CAA 90 bp ACAGTCTCGTGGCACCACCACGTAGGGTTCATAGTTGGCCGCCCATaGCACACGGTACGGGGCCTGAGCCTCCCGCCAGCGGGCATAGTC +
Preference number: 6 (lower is better)
Translates to: TVSWHHHVGFIVGRP*HTVRGLSLPPAGIV
Trigger: GACTATGCCCGCTGGCGGGAGGCTCAGGCCCCGTACCGTGTGCAATGGGCGGCCAACTATGAACCCTACGTGGTGGTGCCACGAGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 72 bp AGGGCAGCAGCCCCATGGTGGCGGGACAAGTCCTGGTaGAATTCGTCCTTGAGGGCCTGGAGGCAGTCACGA +
Preference number: 6 (lower is better)
Translates to: RAAAPWWRDKSW*NSSLRAWRQSR
Trigger: TCGTGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
ENST00000531847.1
CDS TCA 72 bp CATGGTGGCGGGACAAGTCCTGGTGGAATTCGTCCTTaGGGGCCTGGAGGCAGTCACGATAGGTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: HGGGTSPGGIRP*GPGGSHDRWGW
Trigger: CCAGCCCCACCTATCGTGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
ENST00000531847.1
CDS CCA 72 bp GAGCTTCTGCGTCTGTCAGGTACAAGGCCAGGCTCATaGGGCCAGGCCAGTGCCTGCACAGGGCTTCCAACA +
Preference number: 6 (lower is better)
Translates to: ELLRLSGTRPGS*GQASACTGLPT
Trigger: TGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCCCCATGAGCCTGGCCTTGTACCTGACAGACGCAGAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 72 bp GACAGTCTCGTGGCACCACCACGTAGGGTTCATAGTTaGCCGCCCATTGCACACGGTACGGGGCCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: DSLVAPPRRVHS*PPIAHGTGPEP
Trigger: AGGCTCAGGCCCCGTACCGTGTGCAATGGGCGGCCAACTATGAACCCTACGTGGTGGTGCCACGAGACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 72 bp TTGAGGGCAGCAGCCCCATGGTGGCGGGACAAGTCCTaGTGGAATTCGTCCTTGAGGGCCTGGAGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: LRAAAPWWRDKS*WNSSLRAWRQS
Trigger: TGACTGCCTCCAGGCCCTCAAGGACGAATTCCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
ENST00000531847.1
CDS TCA 72 bp ATGGTAGGCCACGTCCTGCCGGGCAGCAAGCACTGGTaGGGCCTCGACGAAATGCAGGAACTGCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: MVGHVLPGSKHW*GLDEMQELLSF
Trigger: GAAGCTCAGCAGTTCCTGCATTTCGTCGAGGCCTCACCAGTGCTTGCTGCCCGGCAGGACGTGGCCTACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 72 bp GCCCACAAAGCGAGGATCATAGCGGGGACAGTCTCGTaGCACCACCACGTAGGGTTCATAGTTGGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: AHKARIIAGTVS*HHHVGFIVGRP
Trigger: TGGGCGGCCAACTATGAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGCTATGATCCTCGCTTTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CAA 72 bp GGCATTAGCCACAGGACTAGACCACCATGGGCCATCTaGCCTGATGCGACGGGTGGGCACAACCACAGGTGG +
Preference number: 6 (lower is better)
Translates to: GISHRTRPPWAI*PDATGGHNHRW
Trigger: CCACCTGTGGTTGTGCCCACCCGTCGCATCAGGCAAGATGGCCCATGGTGGTCTAGTCCTGTGGCTAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS GCA 72 bp GACTTCACCAGGGTGATGACGTCTCGGCTGGAGTTATaGCCCGCACACACGATGGCCACATGCAAGAGCTCG +
Preference number: 6 (lower is better)
Translates to: DFTRVMTSRLEL*PAHTMATCKSS
Trigger: CGAGCTCTTGCATGTGGCCATCGTGTGTGCGGGGCATAACTCCAGCCGAGACGTCATCACCCTGGTGAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS GCA 72 bp TACCAGTCACTCTGGTTCTCCACAAGACCGATCGCCTaGGTGTCTGGGAGGGGAGGGCATAAGGGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: YQSLWFSTRPIA*VSGRGGHKGAV
Trigger: GACAGCTCCCTTATGCCCTCCCCTCCCAGACACGCAGGCGATCGGTCTTGTGGAGAACCAGAGTGACTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414027.2
CDS GCA 72 bp GCATTAGCCACAGGACTAGACCACCATGGGCCATCTTaGCTGATGCGACGGGTGGGCACAACCACAGGTGGA +
Preference number: 6 (lower is better)
Translates to: ALATGLDHHGPS*LMRRVGTTTGG
Trigger: TCCACCTGTGGTTGTGCCCACCCGTCGCATCAGGCAAGATGGCCCATGGTGGTCTAGTCCTGTGGCTAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS CAA 90 bp ACTCATCAGGGCATTAGCCACAGGACTAGACCACCATGGGCCATCTaGCCTGATGCGACGGGTGGGCACAACCACAGGTGGAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: THQGISHRTRPPWAI*PDATGGHNHRWSCC
Trigger: ACAGCAGCTCCACCTGTGGTTGTGCCCACCCGTCGCATCAGGCAAGATGGCCCATGGTGGTCTAGTCCTGTGGCTAATGCCCTGATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS CAA 90 bp ACATTCCAGACACAAGGCAGACGCTGCACTAGCCCCGGGTGCTCCTaGATCACAGCGTTGAAGATGTCCTGGTCAGCCAGTGAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: TFQTQGRRCTSPGCS*ITALKMSWSASEVA
Trigger: TGCCACCTCACTGGCTGACCAGGACATCTTCAACGCTGTGATCAAGGAGCACCCGGGGCTAGTGCAGCGTCTGCCTTGTGTCTGGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS TCA 72 bp AGCACTGGTGAGGCCTCGACGAAATGCAGGAACTGCTaGGCTTCTGCGTCTGTCAGGTACAAGGCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: STGEASTKCRNC*ASASVRYKARL
Trigger: GAGCCTGGCCTTGTACCTGACAGACGCAGAAGCTCAGCAGTTCCTGCATTTCGTCGAGGCCTCACCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000528236.5
ENST00000529052.5
ENST00000530437.5
ENST00000531526.5
CDS CCA 72 bp ACTCATCAGGGCATTAGCCACAGGACTAGACCACCATaGGCCATCTTGCCTGATGCGACGGGTGGGCACAAC +
Preference number: 6 (lower is better)
Translates to: THQGISHRTRPP*AILPDATGGHN
Trigger: GTTGTGCCCACCCGTCGCATCAGGCAAGATGGCCCATGGTGGTCTAGTCCTGTGGCTAATGCCCTGATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528236.5
CDS CAA 72 bp ACACAAGGCAGACGCTGCACTAGCCCCGGGTGCTCCTaGATCACAGCGTTGAAGATGTCCTGGTCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: TQGRRCTSPGCS*ITALKMSWSAS
Trigger: ACTGGCTGACCAGGACATCTTCAACGCTGTGATCAAGGAGCACCCGGGGCTAGTGCAGCGTCTGCCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325468.9
ENST00000401752.6
ENST00000529052.5
ENST00000531526.5
CDS CAA 90 bp ACATTCCAGACACAAGGCAGACGCTGCACTAGCCCCGGGTGCTCCTaGATCACAGCGTTGAAGATGTCCTGTGTTAAATCCCCGGCCCAA +
Preference number: 6 (lower is better)
Translates to: TFQTQGRRCTSPGCS*ITALKMSCVKSPAQ
Trigger: TTGGGCCGGGGATTTAACACAGGACATCTTCAACGCTGTGATCAAGGAGCACCCGGGGCTAGTGCAGCGTCTGCCTTGTGTCTGGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414027.2
ENST00000525609.5
CDS CAA 72 bp ACACAAGGCAGACGCTGCACTAGCCCCGGGTGCTCCTaGATCACAGCGTTGAAGATGTCCTGTGTTAAATCC +
Preference number: 6 (lower is better)
Translates to: TQGRRCTSPGCS*ITALKMSCVKS
Trigger: GGATTTAACACAGGACATCTTCAACGCTGTGATCAAGGAGCACCCGGGGCTAGTGCAGCGTCTGCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414027.2
ENST00000525609.5