Pregenerated sensors for LAPTM4A-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000223734

Ensembl transcript IDs: ENST00000452342.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCATCTCCAAAAACCCAGCAGCTAAGTAGTTCTTCTACATTATCTTaGTTTCATTTATCCTTAATCCTTTTGCCTTTGGCAGGGTTGGAT	+
Preference number: 5 (lower is better) Translates to: SSPKTQQLSSSSTLS*FHLSLILLPLAGLD Trigger: ATCCAACCCTGCCAAAGGCAAAAGGATTAAGGATAAATGAAAGCAAGATAATGTAGAAGAACTACTTAGCTGCTGGGTTTTTGGAGATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452342.2
CDS GCA 72 bp	CATAATTGCACGTCCCAAGGGCAGGAAAACCGCAACTaGCGAGTTGTGCAGAGCACCACAAAGAAAAGCGGA	+
Preference number: 6 (lower is better) Translates to: HNCTSQGQENRN*RVVQSTTKKSG Trigger: TCCGCTTTTCTTTGTGGTGCTCTGCACAACTCGGCAGTTGCGGTTTTCCTGCCCTTGGGACGTGCAATTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452342.2
CDS CCA 72 bp	TTTATCCTTAATCCTTTTGCCTTTGGCAGGGTTGGATaGTCTTTCTTCGCCCCCACCAAGGAGGCTTCGGAG	+
Preference number: 6 (lower is better) Translates to: FILNPFAFGRVG*SFFAPTKEASE Trigger: CTCCGAAGCCTCCTTGGTGGGGGCGAAGAAAGACCATCCAACCCTGCCAAAGGCAAAAGGATTAAGGATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452342.2
CDS CAA 72 bp	TTATCTTGCTTTCATTTATCCTTAATCCTTTTGCCTTaGGCAGGGTTGGATGGTCTTTCTTCGCCCCCACCA	+
Preference number: 6 (lower is better) Translates to: LSCFHLSLILLP*AGLDGLSSPPP Trigger: TGGTGGGGGCGAAGAAAGACCATCCAACCCTGCCAAAGGCAAAAGGATTAAGGATAAATGAAAGCAAGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452342.2

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