RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LANCL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000147036

Ensembl transcript IDs: ENST00000378619.4, ENST00000378621.7, ENST00000614025.4

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGCAGGGCCACAGTGGAAGATAGAGCCTTCTAAACAAAGACGCTaGAGAGTGGGAATTCAGCCTGATTGGGCTGCAGCAGGTCAATCA +
Preference number: 1 (lower is better)
Translates to: SAGPQWKIEPSKQRR*RVGIQPDWAAAGQS
Trigger: TGATTGACCTGCTGCAGCCCAATCAGGCTGAATTCCCACTCTTCAGCGTCTTTGTTTAGAAGGCTCTATCTTCCACTGTGGCCCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR TCA 90 bp TTATGGAGGGGAAGCAGGATAAATGCCACCACCACCCTATTCTCATaGATAGCCACACTCACTTGTGATCTGACTACTAGGCCCAACTTC +
Preference number: 1 (lower is better)
Translates to: LWRGSRINATTTLFS*IATLTCDLTTRPNF
Trigger: GAAGTTGGGCCTAGTAGTCAGATCACAAGTGAGTGTGGCTATTCATGAGAATAGGGTGGTGGTGGCATTTATCCTGCTTCCCCTCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 90 bp TGCAGATCCTTTCTCAAATCTGGCATCATGTTGCCTTCACCTGCCTaGTTCCTTCCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGAT +
Preference number: 1 (lower is better)
Translates to: CRSFLKSGIMLPSPA*FLPSDGNVKAHGCD
Trigger: ATCGCAACCATGAGCCTTAACATTGCCATCAGAAGGAAGGAATCAGGCAGGTGAAGGCAACATGATGCCAGATTTGAGAAAGGATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 90 bp TCTATTCGCTGGGAAATACACATTCCAAAACTAACATGTGGTGCTTaGCCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCC +
Preference number: 1 (lower is better)
Translates to: SIRWEIHIPKLTCGA*PSIYSPVYGFAKCS
Trigger: GGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCACATGTTAGTTTTGGAATGTGTATTTCCCAGCGAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 90 bp CTCTATCTTGCTTATAGAGATTTCATTATACCATGCAGTGGGCTGTaGGCAAACTCCCACATGAAAGGGAAGCAATATCAACTGACTAGT +
Preference number: 1 (lower is better)
Translates to: LYLAYRDFIIPCSGL*ANSHMKGKQYQLTS
Trigger: ACTAGTCAGTTGATATTGCTTCCCTTTCATGTGGGAGTTTGCTCACAGCCCACTGCATGGTATAATGAAATCTCTATAAGCAAGATAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 90 bp CAACTTCTATGTGTTTACAGCAGGGTTGAATTTGATATGACAACTTaGCTCAATGAGTATTACAGCCAATTTCTAGTGGACCCTGTATCT +
Preference number: 1 (lower is better)
Translates to: QLLCVYSRVEFDMTT*LNEYYSQFLVDPVS
Trigger: AGATACAGGGTCCACTAGAAATTGGCTGTAATACTCATTGAGCCAAGTTGTCATATCAAATTCAACCCTGCTGTAAACACATAGAAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR GCA 90 bp AAATTCTATTCGCTGGGAAATACACATTCCAAAACTAACATGTGGTaGTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTG +
Preference number: 1 (lower is better)
Translates to: KFYSLGNTHSKTNMW*LTQYIFTSIWLCKV
Trigger: CACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCACATGTTAGTTTTGGAATGTGTATTTCCCAGCGAATAGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 90 bp GTGACCCAGACCTCAAGCACTACATCCACATATAGAGATTCTATTTaGTTGAAATTCTTATTGGAAGTCATAACTGGGCATGATTTTTCT +
Preference number: 1 (lower is better)
Translates to: VTQTSSTTSTYRDSI*LKFLLEVITGHDFS
Trigger: AGAAAAATCATGCCCAGTTATGACTTCCAATAAGAATTTCAACCAAATAGAATCTCTATATGTGGATGTAGTGCTTGAGGTCTGGGTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 90 bp CTCACATGCAGCTCTTATACACTTGAAATGTGGCTACTTCGAGACTaGAGATGTATAGTAAGTATAAAATACACACTAGAGTTTGAAGAC +
Preference number: 1 (lower is better)
Translates to: LTCSSYTLEMWLLRD*RCIVSIKYTLEFED
Trigger: GTCTTCAAACTCTAGTGTGTATTTTATACTTACTATACATCTCCAGTCTCGAAGTAGCCACATTTCAAGTGTATAAGAGCTGCATGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 90 bp ATACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATaGTTAGCACATCATCATCAGACCTATCAGAACTTAAAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: ILKHGLCLDLTHKSK*LAHHHQTYQNLKGQ
Trigger: CTGCCCTTTTAAGTTCTGATAGGTCTGATGATGATGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 90 bp AGTAAATTCTATTCGCTGGGAAATACACATTCCAAAACTAACATGTaGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAA +
Preference number: 1 (lower is better)
Translates to: SKFYSLGNTHSKTNM*CLTQYIFTSIWLCK
Trigger: TTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCACATGTTAGTTTTGGAATGTGTATTTCCCAGCGAATAGAATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 90 bp TCCAAAATGTCTTGCTATCAAAGCATAATGCAGTCTCCCCATTATTaGGAGACTATTTCAATGTATCCTCAAACATTTCCACTATTACCT +
Preference number: 1 (lower is better)
Translates to: SKMSCYQSIMQSPHY*ETISMYPQTFPLLP
Trigger: AGGTAATAGTGGAAATGTTTGAGGATACATTGAAATAGTCTCTCAATAATGGGGAGACTGCATTATGCTTTGATAGCAAGACATTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 90 bp TTGTTCTCAGCAAGCAAAATAAATATTTGCATTAAAAGGAGCTCCTaGGCTAAATCAGTCTATTCCCATGTAGTAAGTCTTGGTGAATCA +
Preference number: 1 (lower is better)
Translates to: LFSASKINICIKRSS*AKSVYSHVVSLGES
Trigger: TGATTCACCAAGACTTACTACATGGGAATAGACTGATTTAGCTCAGGAGCTCCTTTTAATGCAAATATTTATTTTGCTTGCTGAGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 90 bp GGTTGCGATACCATTGAATGTGGCTTATGTGGAAACTGCCTCGGCTaGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGATAGAGCCT +
Preference number: 2 (lower is better)
Translates to: GCDTIECGLCGNCLG*AQGISAGPQWKIEP
Trigger: AGGCTCTATCTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCCACATTCAATGGTATCGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 90 bp TCCTTCCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATaGAATGTGGCTTATGTGGAAACTGCCTCGGCTTGGCTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: SFLLMAMLRLMVAIP*NVAYVETASAWLRG
Trigger: TCCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGAAACTGCCTCGGCTTaGCTCAGGGGATCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIETASA*LRGSLQ
Trigger: CTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGATTCCACAATCACTGGTaGCTTCCTCAGCCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGFHNHW*LPQPVC
Trigger: GCAGACAGGCTGAGGAAGTCACCAGTGATTGTGGAA...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAGGCAGAGCAAGACTTTaGGATTTCCAGCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGGRARL*DFQHRA
Trigger: AGCCCTGTGCTGGAAATCTCAAAGTCTTGCTCTGCC...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACGGCTCAGGGGATCTCTaGAGGGCCACAGTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHGSGDL*RATVED
Trigger: ATCTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCC...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACGGCTTATGTGGAAACTaGCTCGGCTTGGCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHGLCGN*LGLAQG
Trigger: CCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCC...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACTTCCTCAGCCTGTCTaGCTGTCCCAAACAAAGGCA +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGLPQPV*LSQTKA
Trigger: TGCCTTTGTTTGGGACAGGCAGACAGGCTGAGGAAG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCAATCAGGGGTGGTCCTaGGTTAGAGGTCCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPNQGWS*VRGPRK
Trigger: CTTTCTGGGACCTCTAACCCAGGACCACCCCTGATT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAAATCAGGGGTGGTCCTaGGTTAGAGGTCCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGNQGWS*VRGPRK
Trigger: CTTTCTGGGACCTCTAACCCAGGACCACCCCTGATT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGATAAGGAGAAAATCTaGCCTCCCAGGCGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPDKEKI*PPRRKE
Trigger: CTCCTTTCGCCTGGGAGGGCAGATTTTCTCCTTATC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCAGAAGGAGAAGTTGGTaGATCAGGGGTGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTRRRSW*IRGGPG
Trigger: CCCAGGACCACCCCTGATTCACCAACTTCTCCTTCT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCAGTGGGAATTCAGCCTaGTTGGGCTGCAGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTSGNSA*LGCSRS
Trigger: TGACCTGCTGCAGCCCAATCAGGCTGAATTCCCACT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCAGCACAGGGCTCTTTaGACCACTAATGGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPQHRAL*TTNGFP
Trigger: AGGAAAACCATTAGTGGTGCAAAGAGCCCTGTGCTG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCAGCTCATGGTACTGCTaGGCTGCATTTGGGGAAATA +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPSSWYC*AAFGEI
Trigger: TATTTCCCCAAATGCAGCCCAGCAGTACCATGAGCT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTTGGTGAATCAGGGGTaGTCCTGGGTTAGAGGTCCC +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLLVNQG*SWVRGP
Trigger: GGGACCTCTAACCCAGGACCACCCCTGATTCACCAA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAAAAGACGCTGAAGAGTaGGAATTCAGCCTGATTGGG +
Preference number: 2 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIKDAEE*EFSLIG
Trigger: CCCAATCAGGCTGAATTCCCACTCTTCAGCGTCTTT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR CAA 90 bp ATTAAATTTTTCCACAGGGCAGCTCATGGTACTGCTGGGCTGCATTaGGGGAAATATTGCAGCTCTCGTGTAATAGGCAGGTTCTGTTTA +
Preference number: 2 (lower is better)
Translates to: IKFFHRAAHGTAGLH*GKYCSSRVIGRFCL
Trigger: TAAACAGAACCTGCCTATTACACGAGAGCTGCAATATTTCCCCAAATGCAGCCCAGCAGTACCATGAGCTGCCCTGTGGAAAAATTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTTCCACAATCACTGGTaGCTTCCTCAGCCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLFHNHW*LPQPVC
Trigger: GCAGACAGGCTGAGGAAGTCACCAGTGATTGTGGAA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCTTCAGGTCTCAAGGATaGATTGTGAAAGGAACAGCA +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPFRSQG*IVKGTA
Trigger: TGCTGTTCCTTTCACAATTCATCCTTGAGACCTGAA...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCGGCAGAGCAAGACTTTaGGATTTCCAGCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLGRARL*DFQHRA
Trigger: AGCCCTGTGCTGGAAATCTCAAAGTCTTGCTCTGCC...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCTGCTGCTGTATTTGTaGAACTCATGGCTGTTATCT +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPLLLYL*NSWLLS
Trigger: AGATAACAGCCATGAGTTTCACAAATACAGCAGCAG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGGCTCAGGGGATCTCTaGAGGGCCACAGTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: SFSYGETLVAISRILIDTGSGDL*RATVED
Trigger: ATCTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGGCTTATGTGGAAACTaGCTCGGCTTGGCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: SFSYGETLVAISRILIDTGLCGN*LGLAQG
Trigger: CCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCCCTCACCCACCCCTTTaGCTGCCTTCTCATTTGCTT +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLPHPPL*LPSHLL
Trigger: AAGCAAATGAGAAGGCAGGCAAAGGGGTGGGTGAGG...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGAAACTGCCTCGGCTTaGCTCAGGGGATCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILETASA*LRGSLQ
Trigger: CTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAATCCTTTCTCAAATCTaGCATCATGTTGCCTTCACC +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGILSQI*HHVAFT
Trigger: GGTGAAGGCAACATGATGCCAGATTTGAGAAAGGAT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACTCTGCAGGGCCACAGTaGAAGATAGAGCCTTCTAAA +
Preference number: 2 (lower is better)
Translates to: VLQPISSGPCILEGKVTNSAGPQ*KIEPSK
Trigger: TTTAGAAGGCTCTATCTTCCACTGTGGCCCTGCAGA...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATATGGTTGCGATACCATTaGATGTGGCTTATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIWLRYH*MWLMWK
Trigger: TTTCCACATAAGCCACATTCAATGGTATCGCAACCA...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAGACAACTTGGCTCAATaGGTATTACAGCCAATTTCT +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGDNLAQ*VLQPIS
Trigger: AGAAATTGGCTGTAATACTCATTGAGCCAAGTTGTC...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACTCTAAACAAAGACGCTaGAGAGTGGGAATTCAGCCT +
Preference number: 2 (lower is better)
Translates to: VLQPISSGPCILEGKVTNSKQRR*RVGIQP
Trigger: AGGCTGAATTCCCACTCTTCAGCGTCTTTGTTTAGA...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAAATCTGGCATCATGTTaGCTTCACCTGCCTGATTCC +
Preference number: 2 (lower is better)
Translates to: FTKHILRGSWTIKTACVPNLASC*LHLPDS
Trigger: GGAATCAGGCAGGTGAAGGCAACATGATGCCAGATT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCGGGAAGCAGGATAAATaGCACCACCACCCTATTCTC +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLGKQDK*HHHPIL
Trigger: GAGAATAGGGTGGTGGTGGCATTTATCCTGCTTCCC...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCTTATTATTACTACAGTaGCCCCTAAAAGTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPLLLLQ*PLKVAE
Trigger: CTCTGCCACTTTTAGGGGCCACTGTAGTAATAATAA...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAGGTATCACCCCAAACTaGGCATTTTCACTGATGAAC +
Preference number: 2 (lower is better)
Translates to: FTKHILRGSWTIKTACVPGITPN*AFSLMN
Trigger: GTTCATCAGTGAAAATGCTCAGTTTGGGGTGATACC...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAATGTGGGGAGTCATCTaGAAGCTGCTATTTATGTGG +
Preference number: 2 (lower is better)
Translates to: FTKHILRGSWTIKTACVPMWGVI*KLLFMW
Trigger: CCACATAAATAGCAGCTTTCAGATGACTCCCCACAT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCAGTCTCCCCATTATTaGGAGACTATTTCAATGTAT +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPQSPHY*ETISMY
Trigger: ATACATTGAAATAGTCTCTCAATAATGGGGAGACTG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCAATTTGGGACAGTGCTaGATAAATAGCCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLNLGQC*INSPGP
Trigger: GGGACCTGGGCTATTTATTCAGCACTGTCCCAAATT...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATATCGGTAAATAAGAATTaGGCAAACCAGTCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSISVNKN*ANQSEV
Trigger: TACCTCTGACTGGTTTGCTCAATTCTTATTTACCGA...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR-3UTR GCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCTTCCTCAGCCTGTCTaGCTGTCCCAAACAAAGGCA +
Preference number: 2 (lower is better)
Translates to: DKILGKGSTYALHNEVTDLPQPV*LSQTKA
Trigger: TGCCTTTGTTTGGGACAGGCAGACAGGCTGAGGAAG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAGTTAAAGAAATAAGCTaGCACTGGAAGAGATGCAAT +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGVKEIS*HWKRCN
Trigger: ATTGCATCTCTTCCAGTGGCAGCTTATTTCTTTAAC...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAAGTTCACACTTCCTATaGAGAAAAACACTTTACAGC +
Preference number: 2 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGSSHFL*RKTLYS
Trigger: GCTGTAAAGTGTTTTTCTCCATAGGAAGTGTGAACT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAATTTCCTACTCAATCTaGTATATGCAATTGCCACTG +
Preference number: 2 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIISYSI*YMQLPL
Trigger: CAGTGGCAATTGCATATATCAGATTGAGTAGGAAAT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCTCAAACATGGTCTTTaGTTAGATTTGACACACAAA +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPLKHGL*LDLTHK
Trigger: TTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCATCCTTTCTCAAATCTaGCATCATGTTGCCTTCACC +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTILSQI*HHVAFT
Trigger: GGTGAAGGCAACATGATGCCAGATTTGAGAAAGGAT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGACAATACTCAAACATaGTCTTTGCTTAGATTTGAC +
Preference number: 2 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPDNTQT*SLLRFD
Trigger: GTCAAATCTAAGCAAAGACCATGTTTGAGTATTGTC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATGGAATTCAGCCTGATTaGGCTGCAGCAGGTCAATCA +
Preference number: 2 (lower is better)
Translates to: DKILGKGSTYALHNEVTDGIQPD*AAAGQS
Trigger: TGATTGACCTGCTGCAGCCCAATCAGGCTGAATTCC...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR CAA 90 bp TTCTATTCGCTGGGAAATACACATTCCAAAACTAACATGTGGTGCTaGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: FYSLGNTHSKTNMWC*TQYIFTSIWLCKVL
Trigger: GAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCACATGTTAGTTTTGGAATGTGTATTTCCCAGCGAATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTTTCCCCTTTTCCTATaGTCCCTTGTTTCACATCTA +
Preference number: 2 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIFPLFL*SLVSHL
Trigger: TAGATGTGAAACAAGGGATCATAGGAAAAGGGGAAA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTATACTTCAGCAACCTaGCAATCCATTCCTCATAGC +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLYTSAT*QSIPHS
Trigger: GCTATGAGGAATGGATTGTCAGGTTGCTGAAGTATA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGGGTTGAATTTGATATaGCAACTTGGCTCAATGAGT +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTGLNLI*QLGSMS
Trigger: ACTCATTGAGCCAAGTTGTCATATCAAATTCAACCC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCCTGCTGCTGTATTTGTaGAACTCATGGCTGTTATCT +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLLLLYL*NSWLLS
Trigger: AGATAACAGCCATGAGTTTCACAAATACAGCAGCAG...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCATCTTGAGGGGTTCTTaGACGATAAAAACTGCATGT +
Preference number: 2 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIILRGS*TIKTAC
Trigger: ACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGAT...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCCTTCTTCCTCAGTATTaGACAGGGAGAAGAAAGACA +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLLLPQY*TGRRKT
Trigger: TGTCTTTCTTCTCCCTGTCCAATACTGAGGAAGAAG...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTCTGCATAATGAAGTaGCAGATGCTCCTACAGTGT +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILLCIMK*QMLLQC
Trigger: ACACTGTAGGAGCATCTGTCACTTCATTATGCAGAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGGTATCACCCCAAACTaGGCATTTTCACTGATGAAC +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILGITPN*AFSLMN
Trigger: GTTCATCAGTGAAAATGCTCAGTTTGGGGTGATACC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCAATAAACTTAGAAAGTaGAACCCTGGGTTTGAATCC +
Preference number: 2 (lower is better)
Translates to: LKKHREIYSSKPLFYSVINKLRK*NPGFES
Trigger: GGATTCAAACCCAGGGTTTCACTTTCTAAGTTTATT...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAACCACCCTATTCTCATaGATAGCCACACTCACTTGT +
Preference number: 2 (lower is better)
Translates to: SFSYGETLVAISRILIDTTTLFS*IATLTC
Trigger: ACAAGTGAGTGTGGCTATTCATGAGAATAGGGTGGT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCATTCATATGCGATATTaGCTCTCCTTAAGTCAGTCT +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTIHMRY*LSLSQS
Trigger: AGACTGACTTAAGGAGAGTCAATATCGCATATGAAT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCCAAAGACAAAACGGATaGTCTAAATCAATCCACATG +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTQRQNG*SKSIHM
Trigger: CATGTGGATTGATTTAGATCATCCGTTTTGTCTTTG...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCGAGTCATCTGAAAGCTaGTATTTATGTGGTATCACC +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLESSES*YLCGIT
Trigger: GGTGATACCACATAAATAGCAGCTTTCAGATGACTC...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGTTAAAGAAATAAGCTaGCACTGGAAGAGATGCAAT +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTVKEIS*HWKRCN
Trigger: ATTGCATCTCTTCCAGTGGCAGCTTATTTCTTTAAC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCAGACTTGAATTAAAGTaGAGATCAAACTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLRLELK*RSNSPQ
Trigger: CTGGGGTGAGTTTGATCTGCACTTTAATTCAAGTCT...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 90 bp TCCATTTCTACTGCTAGAGAGTCTATGTGCAACTCATGTTACATTTaGCATTTTCAAGAACATAGGGATTCTACTGCTGCTACAGTATTC +
Preference number: 2 (lower is better)
Translates to: SISTARESMCNSCYI*HFQEHRDSTAATVF
Trigger: GAATACTGTAGCAGCAGTAGAATCCCTATGTTCTTGAAAATGCAAAATGTAACATGAGTTGCACATAGACTCTCTAGCAGTAGAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTATGGTTGCGATACCATTaGATGTGGCTTATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILWLRYH*MWLMWK
Trigger: TTTCCACATAAGCCACATTCAATGGTATCGCAACCA...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACCTACTTTATTGCAATaGGTGCAAACACACACAGTC +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILPTLLQ*VQTHTV
Trigger: GACTGTGTGTGTTTGCACTCATTGCAATAAAGTAGG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAATCCACAACTCACTTTaGGATACTGAGCTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: SFSYGETLVAISRILIDTIHNSL*DTELQQ
Trigger: TTGCTGAAGCTCAGTATCTCAAAGTGAGTTGTGGAT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTTGGACGATAAAAACTaGATGTGTTCCATAAAGCTC +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLLDDKN*MCSIKL
Trigger: GAGCTTTATGGAACACATGCAGTTTTTATCGTCCAA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCCTCAAACATGGTCTTTaGTTAGATTTGACACACAAA +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTLKHGL*LDLTHK
Trigger: TTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAG...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR GCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGTTTCCAAAATGTCTTaGTATCAAAGCATAATGCAG +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTVSKMS*YQSIMQ
Trigger: CTGCATTATGCTTTGATAGCAAGACATTTTGGAAAC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGTTGTTACCTTTCTTTaGTCAGATTCTTTGAGAATG +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTVVTFL*SDSLRM
Trigger: CATTCTCAAAGAATCTGACCAAAGAAAGGTAACAAC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTACCAGGTTTATTTATaGAGGGGAAGCAGGATAAAT +
Preference number: 2 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLYQVYL*RGSRIN
Trigger: ATTTATCCTGCTTCCCCTCCATAAATAAACCTGGTA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCACAAAGTTTTTCTTATaGAGAGACACTTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTTKFFL*RDTCGN
Trigger: ATTGCCACAAGTGTCTCTCCATAAGAAAAACTTTGT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 90 bp ACATTAAATCTCTGCAGTTTTAAGATGAATTGTGGTATCTTTATTTaGCAGATCCTTTCTCAAATCTGGCATCATGTTGCCTTCACCTGC +
Preference number: 2 (lower is better)
Translates to: TLNLCSFKMNCGIFI*QILSQIWHHVAFTC
Trigger: GCAGGTGAAGGCAACATGATGCCAGATTTGAGAAAGGATCTGCAAAATAAAGATACCACAATTCATCTTAAAACTGCAGAGATTTAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 90 bp ACCCAGACCTCAAGCACTACATCCACATATAGAGATTCTATTTGGTaGAAATTCTTATTGGAAGTCATAACTGGGCATGATTTTTCTATG +
Preference number: 2 (lower is better)
Translates to: TQTSSTTSTYRDSIW*KFLLEVITGHDFSM
Trigger: CATAGAAAAATCATGCCCAGTTATGACTTCCAATAAGAATTTCAACCAAATAGAATCTCTATATGTGGATGTAGTGCTTGAGGTCTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTATTTCCCCTTTTCCTATaGTCCCTTGTTTCACATCTA +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILFPLFL*SLVSHL
Trigger: TAGATGTGAAACAAGGGATCATAGGAAAAGGGGAAA...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGACAACTTGGCTCAATaGGTATTACAGCCAATTTCT +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILDNLAQ*VLQPIS
Trigger: AGAAATTGGCTGTAATACTCATTGAGCCAAGTTGTC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAATCTTGAGGGGTTCTTaGACGATAAAAACTGCATGT +
Preference number: 2 (lower is better)
Translates to: KVALRESLFCSLLYPQILILRGS*TIKTAC
Trigger: ACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGAT...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAGAAAGGAACAGCAAATaGAAACAGAAGGTAGCTTTG +
Preference number: 2 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTERNSK*KQKVAL
Trigger: CAAAGCTACCTTCTGTTTCCATTTGCTGTTCCTTTC...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGAAATAAGCTGCCACTaGAAGAGATGCAATTTAGCA +
Preference number: 2 (lower is better)
Translates to: SFSYGETLVAISRILIDTEISCH*KRCNLA
Trigger: TGCTAAATTGCATCTCTTCCAGTGGCAGCTTATTTC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 90 bp TTCCAAAATGTCTTGCTATCAAAGCATAATGCAGTCTCCCCATTATaGAGAGACTATTTCAATGTATCCTCAAACATTTCCACTATTACC +
Preference number: 2 (lower is better)
Translates to: FQNVLLSKHNAVSPL*RDYFNVSSNISTIT
Trigger: GGTAATAGTGGAAATGTTTGAGGATACATTGAAATAGTCTCTCAATAATGGGGAGACTGCATTATGCTTTGATAGCAAGACATTTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAATTTCCTACTCAATCTaGTATATGCAATTGCCACTG +
Preference number: 2 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTISYSI*YMQLPL
Trigger: CAGTGGCAATTGCATATATCAGATTGAGTAGGAAAT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACATCTTTGAGAATGTTATaGATGCTAGAGATCCTTGTC +
Preference number: 2 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTSLRML*MLEILV
Trigger: GACAAGGATCTCTAGCATTCATAACATTCTCAAAGA...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACTAGCTGTAAGACTTTaGAGCATTTACCAAACACAT +
Preference number: 2 (lower is better)
Translates to: SFSYGETLVAISRILIDTLAVRL*SIYQTH
Trigger: ATGTGTTTGGTAAATGCTCCAAAGTCTTACAGCTAG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATTTTGATATGACAACTTaGCTCAATGAGTATTACAGC +
Preference number: 2 (lower is better)
Translates to: DKILGKGSTYALHNEVTDFDMTT*LNEYYS
Trigger: GCTGTAATACTCATTGAGCCAAGTTGTCATATCAAA...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGGGAAACTGCCTCGGCTaGGCTCAGGGGATCTCTGCA +
Preference number: 3 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKGNCLG*AQGISA
Trigger: TGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCC...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 72 bp CCATTGAATGTGGCTTATGTGGAAACTGCCTCGGCTTaGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGA +
Preference number: 3 (lower is better)
Translates to: PLNVAYVETASA*LRGSLQGHSGR
Trigger: TCTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCCACATTCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp CCACAGTGGAAGATAGAGCCTTCTAAACAAAGACGCTaGAGAGTGGGAATTCAGCCTGATTGGGCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: PQWKIEPSKQRR*RVGIQPDWAAA
Trigger: TGCTGCAGCCCAATCAGGCTGAATTCCCACTCTTCAGCGTCTTTGTTTAGAAGGCTCTATCTTCCACTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR-3UTR CAA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGGAAACTGCCTCGGCTaGGCTCAGGGGATCTCTGCA +
Preference number: 3 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTGNCLG*AQGISA
Trigger: TGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp ACTACAGTGGCCCCTAAAAGTGGCAGAGCAAGACTTTaGGATTTCCAGCACAGGGCTCTTTGCACCACTAAT +
Preference number: 3 (lower is better)
Translates to: TTVAPKSGRARL*DFQHRALCTTN
Trigger: ATTAGTGGTGCAAAGAGCCCTGTGCTGGAAATCTCAAAGTCTTGCTCTGCCACTTTTAGGGGCCACTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp GGAAGCAGGATAAATGCCACCACCACCCTATTCTCATaGATAGCCACACTCACTTGTGATCTGACTACTAGG +
Preference number: 3 (lower is better)
Translates to: GSRINATTTLFS*IATLTCDLTTR
Trigger: CCTAGTAGTCAGATCACAAGTGAGTGTGGCTATTCATGAGAATAGGGTGGTGGTGGCATTTATCCTGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR GCA 72 bp GCTCATGGTACTGCTGGGCTGCATTTGGGGAAATATTaGAGCTCTCGTGTAATAGGCAGGTTCTGTTTACAT +
Preference number: 3 (lower is better)
Translates to: AHGTAGLHLGKY*SSRVIGRFCLH
Trigger: ATGTAAACAGAACCTGCCTATTACACGAGAGCTGCAATATTTCCCCAAATGCAGCCCAGCAGTACCATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAAGTGAAACCCTGGGTTaGAATCCTGGTTTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGSETLG*NPGFVL
Trigger: AAGGACAAAACCAGGATTCAAACCCAGGGTTTCACT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCAATTGCATATGTGGTTaGCATTCGTGGCTCACAGCA +
Preference number: 3 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPNCICG*HSWLTA
Trigger: TGCTGTGAGCCACGAATGCAAACCACATATGCAATT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACACCCGAGAACCGGCCTaGAATTCCTCGGTAAATAAG +
Preference number: 3 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHTREPA*NSSVNK
Trigger: CTTATTTACCGAGGAATTCAAGGCCGGTTCTCGGGT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
3UTR TCA 72 bp AGACTTCCAAGAAGAGTTCCCCCAGATGTTCAAAGTTaGGAAAGCTGTACCTTTTCAAAGATTGGGCCGTCC +
Preference number: 3 (lower is better)
Translates to: RLPRRVPPDVQS*ESCTFSKIGPS
Trigger: GGACGGCCCAATCTTTGAAAAGGTACAGCTTTCTCAACTTTGAACATCTGGGGGAACTCTTCTTGGAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAATGGTTGCGATACCATaGAATGTGGCTTATGTGGAA +
Preference number: 3 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGMVAIP*NVAYVE
Trigger: TTCCACATAAGCCACATTCAATGGTATCGCAACCAT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp TTCTCTCTACAGACCTGGCTTGCCTGCTCCTTTTCTTaGGTTATTGGCACTGTAATCCTTTGTTCTCAGCAA +
Preference number: 3 (lower is better)
Translates to: FSLQTWLACSFS*VIGTVILCSQQ
Trigger: TTGCTGAGAACAAAGGATTACAGTGCCAATAACTCAAGAAAAGGAGCAGGCAAGCCAGGTCTGTAGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR GCA 72 bp TGCATTCGTGGCTCACAGCACAATTCTAGCAGACACTaGTGCTGTATTTGTGAAACTCATGGCTGTTATCTT +
Preference number: 3 (lower is better)
Translates to: CIRGSQHNSSRH*CCICETHGCYL
Trigger: AAGATAACAGCCATGAGTTTCACAAATACAGCAGCAGTGTCTGCTAGAATTGTGCTGTGAGCCACGAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAAGTGGACCCTGTATCTaGGAAGGTAAGGTAACCAAC +
Preference number: 3 (lower is better)
Translates to: FTKHILRGSWTIKTACVPSGPCI*EGKVTN
Trigger: GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCCAGGCCTCGATTCATaGGTACTTTCAATTAAAGAA +
Preference number: 3 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPPGLDS*VLSIKE
Trigger: TTCTTTAATTGAAAGTACCAATGAATCGAGGCCTGG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR GCA 72 bp AGGAATGGGACTGTCCAATACAATAGCCAACTCACATaGAGCTCTTATACACTTGAAATGTGGCTACTTCGA +
Preference number: 3 (lower is better)
Translates to: RNGTVQYNSQLT*SSYTLEMWLLR
Trigger: TCGAAGTAGCCACATTTCAAGTGTATAAGAGCTGCATGTGAGTTGGCTATTGTATTGGACAGTCCCATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGTCTACACTTGCAGTTaGGTTTTCTATGTCATAACT +
Preference number: 3 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPVYTCS*VFYVIT
Trigger: AGTTATGACATAGAAAACCAAACTGCAAGTGTAGAC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCAGTGGACCCTGTATCTaGGAAGGTAAGGTAACCAAC +
Preference number: 3 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLSGPCI*EGKVTN
Trigger: GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACT...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAGGTTTCCAAAATGTCTaGCTATCAAAGCATAATGCA +
Preference number: 3 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGGFQNV*LSKHNA
Trigger: TGCATTATGCTTTGATAGCAAGACATTTTGGAAACC...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGAGAAGAAGGAGAAGTaGGTGAATCAGGGGTGGTCC +
Preference number: 3 (lower is better)
Translates to: SFSYGETLVAISRILIDTEKKEK*VNQGWS
Trigger: GGACCACCCCTGATTCACCAACTTCTCCTTCTTCTC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp TCCTTCTTAGTCTGCACACCAGCTAACTTGCTCCAGTaGTCACGTCTTTCTGTATTATCATTTGCCATTTTG +
Preference number: 3 (lower is better)
Translates to: SFLVCTPANLLQ*SRLSVLSFAIL
Trigger: CAAAATGGCAAATGATAATACAGAAAGACGTGATCACTGGAGCAAGTTAGCTGGTGTGCAGACTAAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp GCTTATAGAGATTTCATTATACCATGCAGTGGGCTGTaGGCAAACTCCCACATGAAAGGGAAGCAATATCAA +
Preference number: 3 (lower is better)
Translates to: AYRDFIIPCSGL*ANSHMKGKQYQ
Trigger: TTGATATTGCTTCCCTTTCATGTGGGAGTTTGCTCACAGCCCACTGCATGGTATAATGAAATCTCTATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCTTTACCAAACACATCTaGAGGGGTTCTTGGACGATA +
Preference number: 3 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTFTKHI*RGSWTI
Trigger: TATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAACGGGCTCGGCAAATTaGAGGCTCAGTCATTTAGCT +
Preference number: 3 (lower is better)
Translates to: SFSYGETLVAISRILIDTTGSAN*RLSHLA
Trigger: AGCTAAATGACTGAGCCTCAAATTTGCCGAGCCCGT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCACAACTGAGGCCAATTaGATATGGTTGTATCTGAGG +
Preference number: 3 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLTTEAN*IWLYLR
Trigger: CCTCAGATACAACCATATCAAATTGGCCTCAGTTGT...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR GCA 72 bp TCGCTGGGAAATACACATTCCAAAACTAACATGTGGTaGTTGACCCAGTATATATTCACCAGTATATGGCTT +
Preference number: 3 (lower is better)
Translates to: SLGNTHSKTNMW*LTQYIFTSIWL
Trigger: AAGCCATATACTGGTGAATATATACTGGGTCAAGCACCACATGTTAGTTTTGGAATGTGTATTTCCCAGCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCTGTCATAGTCTACACTaGCAGTTTGGTTTTCTATGT +
Preference number: 3 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTCHSLH*QFGFLC
Trigger: ACATAGAAAACCAAACTGCAAGTGTAGACTATGACA...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACATCTTGAGGGGTTCTaGGACGATAAAAACTGCATG +
Preference number: 3 (lower is better)
Translates to: SFSYGETLVAISRILIDTHLEGF*DDKNCM
Trigger: CATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp TGGGAAATACACATTCCAAAACTAACATGTGGTGCTTaGCCCAGTATATATTCACCAGTATATGGCTTTGCA +
Preference number: 3 (lower is better)
Translates to: WEIHIPKLTCGA*PSIYSPVYGFA
Trigger: TGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCACATGTTAGTTTTGGAATGTGTATTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 72 bp TGTGTTTACAGCAGGGTTGAATTTGATATGACAACTTaGCTCAATGAGTATTACAGCCAATTTCTAGTGGAC +
Preference number: 3 (lower is better)
Translates to: CVYSRVEFDMTT*LNEYYSQFLVD
Trigger: GTCCACTAGAAATTGGCTGTAATACTCATTGAGCCAAGTTGTCATATCAAATTCAACCCTGCTGTAAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAATGGTTGCGATACCATaGAATGTGGCTTATGTGGAA +
Preference number: 3 (lower is better)
Translates to: SFSYGETLVAISRILIDTMVAIP*NVAYVE
Trigger: TTCCACATAAGCCACATTCAATGGTATCGCAACCAT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTGTCATAGTCTACACTaGCAGTTTGGTTTTCTATGT +
Preference number: 3 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLCHSLH*QFGFLC
Trigger: ACATAGAAAACCAAACTGCAAGTGTAGACTATGACA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAACAACTGAGGCCAATTaGATATGGTTGTATCTGAGG +
Preference number: 3 (lower is better)
Translates to: KVALRESLFCSLLYPQILTTEAN*IWLYLR
Trigger: CCTCAGATACAACCATATCAAATTGGCCTCAGTTGT...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAAACATACTTGTAGGTTaGCTTTTTAGGCAACAGAGC +
Preference number: 3 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTNILVG*LFRQQS
Trigger: GCTCTGTTGCCTAAAAAGCAAACCTACAAGTATGTT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAAACCCATTTGTTTCATaGAAGTTACTGAGGTTCGCT +
Preference number: 3 (lower is better)
Translates to: SFSYGETLVAISRILIDTNPFVS*KLLRFA
Trigger: AGCGAACCTCAGTAACTTCAATGAAACAAATGGGTT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCAAACCACTATTTACTaGAAGCAGTTTCACAACTTC +
Preference number: 3 (lower is better)
Translates to: DKILGKGSTYALHNEVTDQTTIY*KQFHNF
Trigger: GAAGTTGTGAAACTGCTTCAAGTAAATAGTGGTTTG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGAGGGAAAGTTTATTTaGTTCACTATTGTATCCCCA +
Preference number: 3 (lower is better)
Translates to: SFSYGETLVAISRILIDTEGKFI*FTIVSP
Trigger: TGGGGATACAATAGTGAACAAAATAAACTTTCCCTC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp AACTTCTATGTGTTTACAGCAGGGTTGAATTTGATATaGCAACTTGGCTCAATGAGTATTACAGCCAATTTC +
Preference number: 3 (lower is better)
Translates to: NFYVFTAGLNLI*QLGSMSITANF
Trigger: GAAATTGGCTGTAATACTCATTGAGCCAAGTTGTCATATCAAATTCAACCCTGCTGTAAACACATAGAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp TCTTGCTATCAAAGCATAATGCAGTCTCCCCATTATTaGGAGACTATTTCAATGTATCCTCAAACATTTCCA +
Preference number: 3 (lower is better)
Translates to: SCYQSIMQSPHY*ETISMYPQTFP
Trigger: TGGAAATGTTTGAGGATACATTGAAATAGTCTCTCAATAATGGGGAGACTGCATTATGCTTTGATAGCAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR TCA 72 bp TATTTTGATCACTATATGTCACGTGGTTCTGAGACTTaGATTAAAGTGCAGATCAAACTCACCCCAGAATTA +
Preference number: 3 (lower is better)
Translates to: YFDHYMSRGSET*IKVQIKLTPEL
Trigger: TAATTCTGGGGTGAGTTTGATCTGCACTTTAATTCAAGTCTCAGAACCACGTGACATATAGTGATCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CCA 72 bp CATGGTCTTTGCTTAGATTTGACACACAAATCAAAATaGTTAGCACATCATCATCAGACCTATCAGAACTTA +
Preference number: 3 (lower is better)
Translates to: HGLCLDLTHKSK*LAHHHQTYQNL
Trigger: TAAGTTCTGATAGGTCTGATGATGATGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGGGCCTTTCTGCCATGTaGGTTCCCCACACCGAATAC +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKGLSAM*VPHTEY
Trigger: GTATTCGGTGTGGGGAACTCACATGGCAGAAAGGCC...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGAGTGGGAATTCAGCCTaGTTGGGCTGCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKSGNSA*LGCSRS
Trigger: TGACCTGCTGCAGCCCAATCAGGCTGAATTCCCACT...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGTACCAATTCCCGATCTaGGGGCTTGAGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKYQFPI*GLEMLM
Trigger: CATGAGCATCTCAAGCCCTCAGATCGGGAATTGGTA...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGGCTCAGGTGGCCAGTTaGAGTTTTGTTCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKAQVAS*SFVPVP
Trigger: TGGAACAGGAACAAAACTGCAACTGGCCACCTGAGC...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGGATAAGGAGAAAATCTaGCCTCCCAGGCGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKDKEKI*PPRRKE
Trigger: CTCCTTTCGCCTGGGAGGGCAGATTTTCTCCTTATC...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACCGGGAGGCGGAGCTTaGAGCGAGCCGAGATCCCGC +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGPGGGA*SEPRSR
Trigger: GCGGGATCTCGGCTCGCTGCAAGCTCCGCCTCCCGG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp ACCATTGAATGTGGCTTATGTGGAAACTGCCTCGGCTaGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TIECGLCGNCLG*AQGISAGPQWK
Trigger: CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCCACATTCAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGGGTATCACCCCAAACTaGGCATTTTCACTGATGAAC +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKGITPN*AFSLMN
Trigger: GTTCATCAGTGAAAATGCTCAGTTTGGGGTGATACC...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGTGCCACTGGAAGAGATaGAATTTAGCACAGACCAAG +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKCHWKR*NLAQTK
Trigger: CTTGGTCTGTGCTAAATTGCATCTCTTCCAGTGGCA...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGCTGCTGCTGTATTTGTaGAACTCATGGCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKLLLYL*NSWLLS
Trigger: AGATAACAGCCATGAGTTTCACAAATACAGCAGCAG...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp TTCCACAGGGCAGCTCATGGTACTGCTGGGCTGCATTaGGGGAAATATTGCAGCTCTCGTGTAATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FHRAAHGTAGLH*GKYCSSRVIGR
Trigger: CCTGCCTATTACACGAGAGCTGCAATATTTCCCCAAATGCAGCCCAGCAGTACCATGAGCTGCCCTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCCCGGGAGGCGGAGCTTaGAGCGAGCCGAGATCCCGC +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLPGGGA*SEPRSR
Trigger: GCGGGATCTCGGCTCGCTGCAAGCTCCGCCTCCCGG...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGATTTCCTACTCAATCTaGTATATGCAATTGCCACTG +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKISYSI*YMQLPL
Trigger: CAGTGGCAATTGCATATATCAGATTGAGTAGGAAAT...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGCAGTCTCCCCATTATTaGGAGACTATTTCAATGTAT +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKQSPHY*ETISMY
Trigger: ATACATTGAAATAGTCTCTCAATAATGGGGAGACTG...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGTTTATAACAACCCTGTaGAGTAGACAGGGTGATTAT +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKFITTL*SRQGDY
Trigger: ATAATCACCCTGTCTACTTCACAGGGTTGTTATAAA...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGCGCCATGGCACCAGTaGACCAGCTCATTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPAPWHQ*TSSFSL
Trigger: GAGAGAGAATGAGCTGGTGCACTGGTGCCATGGCGC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGAATTCTAGCAGACACTaGTGCTGTATTTGTGAAACT +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKNSSRH*CCICET
Trigger: AGTTTCACAAATACAGCAGCAGTGTCTGCTAGAATT...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAAGAAGGAGAAGTTGGTaGATCAGGGGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGRRRSW*IRGGPG
Trigger: CCCAGGACCACCCCTGATTCACCAACTTCTCCTTCT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGCGCCATGGCACCAGTaGACCAGCTCATTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIAPWHQ*TSSFSL
Trigger: GAGAGAGAATGAGCTGGTGCACTGGTGCCATGGCGC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAGGCTCAGGGGATCTCTaGAGGGCCACAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLGSGDL*RATVED
Trigger: ATCTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCC...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCCTTCTGAGGCAAAGTaGTGTGCTCAGGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPPSEAK*CAQDWW
Trigger: CCACCAGTCCTGAGCACAGCACTTTGCCTCAGAAGG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAGGCAGCTCATGGTACTaGTGGGCTGCATTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGGSSWY*WAAFGE
Trigger: TTCCCCAAATGCAGCCCAGCAGTACCATGAGCTGCC...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGATCTTTAAAACTGACTaGTATGTCACAGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKIFKTD*YVTATS
Trigger: TGAAGTAGCTGTGACATAGCAGTCAGTTTTAAAGAT...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGAAAACTAACATGTGGTaGTTGACCCAGTATATATTC +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKKTNMW*LTQYIF
Trigger: GAATATATACTGGGTCAAGCACCACATGTTAGTTTT...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGTTAACTCTGCATTTGTaGCAAGGCAAATATATTGCA +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKLTLHL*QGKYIA
Trigger: TGCAATATATTTGCCTTGGCACAAATGCAGAGTTAA...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACAGATAGGCAATTCCTaGAGCGCCATGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGQIGNS*SAMAPV
Trigger: CACTGGTGCCATGGCGCTCCAGGAATTGCCTATCTG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCTGCCGGCTACTCCATaGCAAATCCCAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNLPATP*QIPGPF
Trigger: GAAGGGGCCTGGGATTTGCCATGGAGTAGCCGGCAG...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGGTTGTTACCTTTCTTTaGTCAGATTCTTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKVVTFL*SDSLRM
Trigger: CATTCTCAAAGAATCTGACCAAAGAAAGGTAACAAC...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACCACAGGGCAGCTCATaGTACTGCTGGGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGPQGSS*YCWAAF
Trigger: AAATGCAGCCCAGCAGTACCATGAGCTGCCCTGTGG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGGCCTTTCTGCCATGTaGGTTCCCCACACCGAATAC +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIGLSAM*VPHTEY
Trigger: GTATTCGGTGTGGGGAACTCACATGGCAGAAAGGCC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCCTCACCCACCCCTTTaGCTGCCTTCTCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPPHPPL*LPSHLL
Trigger: AAGCAAATGAGAAGGCAGGCAAAGGGGTGGGTGAGG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACCTCACCCACCCCTTTaGCTGCCTTCTCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGPHPPL*LPSHLL
Trigger: AAGCAAATGAGAAGGCAGGCAAAGGGGTGGGTGAGG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp CTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATaGAATGTGGCTTATGTGGAAACTGCCTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LMAMLRLMVAIP*NVAYVETASAW
Trigger: CCAAGCCGAGGCAGTTTCCACATAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACATAGACGACAAGCCGTaGGCTGCCCCCAAGTATTCG +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNIDDKP*AAPKYS
Trigger: CGAATACTTGGGGGCAGCTCACGGCTTGTCGTCTAT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTATTCCACAATCACTGGTaGCTTCCTCAGCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLFHNHW*LPQPVC
Trigger: GCAGACAGGCTGAGGAAGTCACCAGTGATTGTGGAA...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCGGCAGAGCAAGACTTTaGGATTTCCAGCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTGRARL*DFQHRA
Trigger: AGCCCTGTGCTGGAAATCTCAAAGTCTTGCTCTGCC...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR GCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCGGCTTATGTGGAAACTaGCTCGGCTTGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIGLCGN*LGLAQG
Trigger: CCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCC...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGGGAAGCAGGATAAATaGCACCACCACCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPGKQDK*HHHPIL
Trigger: GAGAATAGGGTGGTGGTGGCATTTATCCTGCTTCCC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACCATTCTCTCTCTCGATaGTCTCGCCGAGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHHSLSR*SRRAQV
Trigger: CACCTGAGCTCGGCGAGACCATCGAGAGAGAGAATG...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACCAGATAGGCAATTCCTaGAGCGCCATGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHQIGNS*SAMAPV
Trigger: CACTGGTGCCATGGCGCTCCAGGAATTGCCTATCTG...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCTGCTGGGCTGCATTTaGGGAAATATTGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPLLGCI*GNIAAL
Trigger: GAGAGCTGCAATATTTCCCCAAATGCAGCCCAGCAG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAATAGACGACAAGCCGTaGGCTGCCCCCAAGTATTCG +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPIDDKP*AAPKYS
Trigger: CGAATACTTGGGGGCAGCTCACGGCTTGTCGTCTAT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAAGTGGGAATTCAGCCTaGTTGGGCTGCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPSGNSA*LGCSRS
Trigger: TGACCTGCTGCAGCCCAATCAGGCTGAATTCCCACT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCACTCACTTGTGATCTaGCTACTAGGCCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPHSLVI*LLGPTS
Trigger: AGAAGTTGGGCCTAGTAGTCAGATCACAAGTGAGTG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCCATGCAGTGGGCTGTaGGCAAACTCCCACATGAAA +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNPCSGL*ANSHMK
Trigger: TTTCATGTGGGAGTTTGCTCACAGCCCACTGCATGG...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCATGTGTCCAGGTACTaGGGTTTCTTGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPHVSRY*GFLETR
Trigger: TCTGGTTTCCAAGAAACCGCAGTACCTGGACACATG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACGGAAGACATAGGCACTaGCGGCTACTCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHGRHRH*RLLHGK
Trigger: TTTGCCATGGAGTAGCCGGCAGTGCCTATGTCTTCC...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGATCTACAGACCTGGCTTaGCTGCTCCTTTTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGSTDLA*LLLFLS
Trigger: ACTCAAGAAAAGGAGCAGGCAAGCCAGGTCTGTAGA...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCGGAATTCAGCCTGATTaGGCTGCAGCAGGTCAATCA +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTGIQPD*AAAGQS
Trigger: TGATTGACCTGCTGCAGCCCAATCAGGCTGAATTCC...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTTGGTGAATCAGGGGTaGTCCTGGGTTAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVILVNQG*SWVRGP
Trigger: GGGACCTCTAACCCAGGACCACCCCTGATTCACCAA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAAGCTCATGGTACTGCTaGGCTGCATTTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGSSWYC*AAFGEI
Trigger: TATTTCCCCAAATGCAGCCCAGCAGTACCATGAGCT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp AGCTCATGGTACTGCTGGGCTGCATTTGGGGAAATATaGCAGCTCTCGTGTAATAGGCAGGTTCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: SSWYCWAAFGEI*QLSCNRQVLFT
Trigger: TGTAAACAGAACCTGCCTATTACACGAGAGCTGCAATATTTCCCCAAATGCAGCCCAGCAGTACCATGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATACCTGACAAATTGACTTaGTCTGTGCTGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIPDKLT*SVLESA
Trigger: TGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGG...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACTTTGTTCCTGTTCCATaGGAAAGTCCACGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHFVPVP*ESPRSA
Trigger: GGCAGAGCGTGGACTTTCTCATGGAACAGGAACAAA...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACTTTAGCAGGCCTTTCTaGCATGTGAGTTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHFSRPF*HVSSPH
Trigger: GTGTGGGGAACTCACATGGCAGAAAGGCCTGCTAAA...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACGATAAGGAGAAAATCTaGCCTCCCAGGCGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNDKEKI*PPRRKE
Trigger: CTCCTTTCGCCTGGGAGGGCAGATTTTCTCCTTATC...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCATGGTACTGCTGGGCTaGATTTGGGGAAATATTGCA +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPMVLLG*IWGNIA
Trigger: TGCAATATTTCCCCAAATGCAGCCCAGCAGTACCAT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACACTGCCGGCTACTCCATaGCAAATCCCAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTLPATP*QIPGPF
Trigger: GAAGGGGCCTGGGATTTGCCATGGAGTAGCCGGCAG...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCAATCAGGGGTGGTCCTaGGTTAGAGGTCCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTNQGWS*VRGPRK
Trigger: CTTTCTGGGACCTCTAACCCAGGACCACCCCTGATT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp CAGACTTCCAAGAAGAGTTCCCCCAGATGTTCAAAGTaGAGAAAGCTGTACCTTTTCAAAGATTGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: QTSKKSSPRCSK*RKLYLFKDWAV
Trigger: GACGGCCCAATCTTTGAAAAGGTACAGCTTTCTCAACTTTGAACATCTGGGGGAACTCTTCTTGGAAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGAGTCCAGAATTGCCTaGCAAATTGACTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPESRIA*QIDLIC
Trigger: ACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTACCAATTCCCGATCTaGGGGCTTGAGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIYQFPI*GLEMLM
Trigger: CATGAGCATCTCAAGCCCTCAGATCGGGAATTGGTA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTATCTAAACAAAGACGCTaGAGAGTGGGAATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLSKQRR*RVGIQP
Trigger: AGGCTGAATTCCCACTCTTCAGCGTCTTTGTTTAGA...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCTATACTTCAGCAACCTaGCAATCCATTCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPYTSAT*QSIPHS
Trigger: GCTATGAGGAATGGATTGTCAGGTTGCTGAAGTATA...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCGGTATCACCCCAAACTaGGCATTTTCACTGATGAAC +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTGITPN*AFSLMN
Trigger: GTTCATCAGTGAAAATGCTCAGTTTGGGGTGATACC...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAATGTGGGGAGTCATCTaGAAGCTGCTATTTATGTGG +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIMWGVI*KLLFMW
Trigger: CCACATAAATAGCAGCTTTCAGATGACTCCCCACAT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACAATTTGGGACAGTGCTaGATAAATAGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNNLGQC*INSPGP
Trigger: GGGACCTGGGCTATTTATTCAGCACTGTCCCAAATT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCCTCACTTTGAGATACTaGGCTTCAGCAAGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTLTLRY*ASASFP
Trigger: GGGGAAGCTTGCTGAAGCTCAGTATCTCAAAGTGAG...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACCACTCACTTGTGATCTaGCTACTAGGCCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHHSLVI*LLGPTS
Trigger: AGAAGTTGGGCCTAGTAGTCAGATCACAAGTGAGTG...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAACCACCCTATTCTCATaGATAGCCACACTCACTTGT +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSITTLFS*IATLTC
Trigger: ACAAGTGAGTGTGGCTATTCATGAGAATAGGGTGGT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGCTAACTTGCTCCAGTaGTCACGTCTTTCTGTATTA +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPANLLQ*SRLSVL
Trigger: TAATACAGAAAGACGTGATCACTGGAGCAAGTTAGC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACAGAAAGTCCACGCTCTaGCATACCAATTCCCGATCT +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNRKSTL*HTNSRS
Trigger: AGATCGGGAATTGGTATGGCAGAGCGTGGACTTTCT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCATTTAGCAGGCCTTTCTaGCATGTGAGTTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPFSRPF*HVSSPH
Trigger: GTGTGGGGAACTCACATGGCAGAAAGGCCTGCTAAA...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGGCTCAGGGGATCTCTaGAGGGCCACAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILGSGDL*RATVED
Trigger: ATCTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAGGCTTATGTGGAAACTaGCTCGGCTTGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTGLCGN*LGLAQG
Trigger: CCCCTGAGCCAAGCCGAGGCAGTTTCCACATAAGCC...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACAATCTGGCATCATGTTaGCTTCACCTGCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHNLASC*LHLPDS
Trigger: GGAATCAGGCAGGTGAAGGCAACATGATGCCAGATT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCAGCACAGGGCTCTTTaGACCACTAATGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNQHRAL*TTNGFP
Trigger: AGGAAAACCATTAGTGGTGCAAAGAGCCCTGTGCTG...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAATGGTACTGCTGGGCTaGATTTGGGGAAATATTGCA +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIMVLLG*IWGNIA
Trigger: TGCAATATTTCCCCAAATGCAGCCCAGCAGTACCAT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGGTACTGCGGTTTCTTaGAAACCAGATAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIGTAVS*KPDKLW
Trigger: CCAAAGCTTATCTGGTTTCCAAGAAACCGCAGTACC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATGAAACTGCCTCGGCTTaGCTCAGGGGATCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDETASA*LRGSLQ
Trigger: CTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTC...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCATCCTTTCTCAAATCTaGCATCATGTTGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPILSQI*HHVAFT
Trigger: GGTGAAGGCAACATGATGCCAGATTTGAGAAAGGAT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAAAGCTGCTATTTATGTaGTATCACCCCAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGKLLFM*YHPKLS
Trigger: GCTCAGTTTGGGGTGATACCACATAAATAGCAGCTT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACTTCTTCCTCAGTATTaGACAGGGAGAAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGLLPQY*TGRRKT
Trigger: TGTCTTTCTTCTCCCTGTCCAATACTGAGGAAGAAG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCATTATACCATGCAGTaGGCTGTGAGCAAACTCCCA +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNHYTMQ*AVSKLP
Trigger: TGGGAGTTTGCTCACAGCCCACTGCATGGTATAATG...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCACCTGACAAATTGACTTaGTCTGTGCTGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPPDKLT*SVLESA
Trigger: TGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGG...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCCCCGATCTGAGGGCTTaGGATGCTCATGGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLPDLRA*DAHGKK
Trigger: TTTCTTACCATGAGCATCTCAAGCCCTCAGATCGGG...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGGGTTGAATTTGATATaGCAACTTGGCTCAATGAGT +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPGLNLI*QLGSMS
Trigger: ACTCATTGAGCCAAGTTGTCATATCAAATTCAACCC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTACCTACTTTATTGCAATaGGTGCAAACACACACAGTC +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLPTLLQ*VQTHTV
Trigger: GACTGTGTGTGTTTGCACTCATTGCAATAAAGTAGG...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCCTACTTTATTGCAATaGGTGCAAACACACACAGTC +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTPTLLQ*VQTHTV
Trigger: GACTGTGTGTGTTTGCACTCATTGCAATAAAGTAGG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR TCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACGTGAAACCCTGGGTTTaGATCCTGGTTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNVKPWV*ILVLSF
Trigger: AAAGGACAAAACCAGGATTCAAACCCAGGGTTTCAC...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCTACAAACTGATGACTaGAACAGGCTTGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTLQTDD*NRLGQN
Trigger: ATTTTGCCCAAGCCTGTTTCAGTCATCAGTTTGTAG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAATCCACAACTCACTTTaGGATACTGAGCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIIHNSL*DTELQQ
Trigger: TTGCTGAAGCTCAGTATCTCAAAGTGAGTTGTGGAT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACACCACCCTATTCTCATaGATAGCCACACTCACTTGT +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHTTLFS*IATLTC
Trigger: ACAAGTGAGTGTGGCTATTCATGAGAATAGGGTGGT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACGGAAGCAATATCAACTaGCTAGTACTATCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNGSNIN*LVLSPA
Trigger: TGCAGGGGATAGTACTAGTCAGTTGATATTGCTTCC...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCAGAAAGTCCACGCTCTaGCATACCAATTCCCGATCT +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTRKSTL*HTNSRS
Trigger: AGATCGGGAATTGGTATGGCAGAGCGTGGACTTTCT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCACATGTGTCCAGGTACTaGGGTTTCTTGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPHVSRY*GFLETR
Trigger: TCTGGTTTCCAAGAAACCGCAGTACCTGGACACATG...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCCTTCTGAGGCAAAGTaGTGTGCTCAGGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDPSEAK*CAQDWW
Trigger: CCACCAGTCCTGAGCACAGCACTTTGCCTCAGAAGG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGGCAGCTCATGGTACTaGTGGGCTGCATTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILGSSWY*WAAFGE
Trigger: TTCCCCAAATGCAGCCCAGCAGTACCATGAGCTGCC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAGCACACCAGCTAACTTaGTCCAGTGATCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPAHQLT*SSDHVF
Trigger: AAAGACGTGATCACTGGAGCAAGTTAGCTGGTGTGC...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCTCGCCGAGCTCAGGTaGCCAGTTGCAGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDLAELR*PVAVLF
Trigger: GAACAAAACTGCAACTGGCCACCTGAGCTCGGCGAG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTCGCCGAGCTCAGGTaGCCAGTTGCAGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILLAELR*PVAVLF
Trigger: GAACAAAACTGCAACTGGCCACCTGAGCTCGGCGAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACATTCTCTCTCTCGATaGTCTCGCCGAGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILHSLSR*SRRAQV
Trigger: CACCTGAGCTCGGCGAGACCATCGAGAGAGAGAATG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCAAAGACGCTGAAGAGTaGGAATTCAGCCTGATTGGG +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIKDAEE*EFSLIG
Trigger: CCCAATCAGGCTGAATTCCCACTCTTCAGCGTCTTT...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAAAGCTGCTATTTATGTaGTATCACCCCAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIKLLFM*YHPKLS
Trigger: GCTCAGTTTGGGGTGATACCACATAAATAGCAGCTT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCATCTTGAGGGGTTCTTaGACGATAAAAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPILRGS*TIKTAC
Trigger: ACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGAT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCCTGCTGGGCTGCATTTaGGGAAATATTGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLLLGCI*GNIAAL
Trigger: GAGAGCTGCAATATTTCCCCAAATGCAGCCCAGCAG...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCCACAGGGCAGCTCATaGTACTGCTGGGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDPQGSS*YCWAAF
Trigger: AAATGCAGCCCAGCAGTACCATGAGCTGCCCTGTGG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAATATTCACCAGTATATaGCTTTGCAAAGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIIFTSI*LCKVLP
Trigger: GGGGAGCACTTTGCAAAGCCATATACTGGTGAATAT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCCATTATACCATGCAGTaGGCTGTGAGCAAACTCCCA +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIHYTMQ*AVSKLP
Trigger: TGGGAGTTTGCTCACAGCCCACTGCATGGTATAATG...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCTCGGTAAATAAGAATTaGGCAAACCAGTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTSVNKN*ANQSEV
Trigger: TACCTCTGACTGGTTTGCTCAATTCTTATTTACCGA...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCATCTAAACAAAGACGCTaGAGAGTGGGAATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPSKQRR*RVGIQP
Trigger: AGGCTGAATTCCCACTCTTCAGCGTCTTTGTTTAGA...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATATTTCCCCTTTTCCTATaGTCCCTTGTTTCACATCTA +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIFPLFL*SLVSHL
Trigger: TAGATGTGAAACAAGGGATCATAGGAAAAGGGGAAA...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGATCTTTGAGAATGTTATaGATGCTAGAGATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGSLRML*MLEILV
Trigger: GACAAGGATCTCTAGCATTCATAACATTCTCAAAGA...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAGTGAAACCCTGGGTTTaGATCCTGGTTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPVKPWV*ILVLSF
Trigger: AAAGGACAAAACCAGGATTCAAACCCAGGGTTTCAC...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAAATAAACTTAGAAAGTaGAACCCTGGGTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGNKLRK*NPGFES
Trigger: GGATTCAAACCCAGGGTTTCACTTTCTAAGTTTATT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGGCAGAGCAAGACTTTaGGATTTCCAGCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTGRARL*DFQHRA
Trigger: AGCCCTGTGCTGGAAATCTCAAAGTCTTGCTCTGCC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAATTAAAAGGAGCTCCTaGGCTAAATCAGTCTATTCC +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLIKRSS*AKSVYS
Trigger: GGAATAGACTGATTTAGCTCAGGAGCTCCTTTTAAT...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGCCTGCTCCTTTTCTTaGGTTATTGGCACTGTAATC +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTACSFS*VIGTVI
Trigger: GATTACAGTGCCAATAACTCAAGAAAAGGAGCAGGC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCGTGGTTCTGAGACTTaGATTAAAGTGCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTRGSET*IKVQIK
Trigger: TTTGATCTGCACTTTAATTCAAGTCTCAGAACCACG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCCAGATGTTCAAAGTTaGGAAAGCTGTACCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTPDVQS*ESCTFS
Trigger: TGAAAAGGTACAGCTTTCTCAACTTTGAACATCTGG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACTAATGTGCAGTTTGTaGAATGTATCATTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGLMCSL*NVSLGR
Trigger: CCTTCCTAATGATACATTTCACAAACTGCACATTAG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGGAAGCAATATCAACTaGCTAGTACTATCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTGSNIN*LVLSPA
Trigger: TGCAGGGGATAGTACTAGTCAGTTGATATTGCTTCC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACCATGCAGTGGGCTGTaGGCAAACTCCCACATGAAA +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTPCSGL*ANSHMK
Trigger: TTTCATGTGGGAGTTTGCTCACAGCCCACTGCATGG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGGAAGACATAGGCACTaGCGGCTACTCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTGRHRH*RLLHGK
Trigger: TTTGCCATGGAGTAGCCGGCAGTGCCTATGTCTTCC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCTTGGACGATAAAAACTaGATGTGTTCCATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPLDDKN*MCSIKL
Trigger: GAGCTTTATGGAACACATGCAGTTTTTATCGTCCAA...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTCTACAGACCTGGCTTaGCTGCTCCTTTTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLSTDLA*LLLFLS
Trigger: ACTCAAGAAAAGGAGCAGGCAAGCCAGGTCTGTAGA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCGCCTGCCTTCTCATTTaGTTTCCTTGCCAAATTTAT +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTACLLI*FPCQIY
Trigger: ATAAATTTGGCAAGGAAAGCAAATGAGAAGGCAGGC...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACCATTTGGGGAAATATTaGAGCTCTCGTGTAATAGGC +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHHLGKY*SSRVIG
Trigger: GCCTATTACACGAGAGCTGCAATATTTCCCCAAATG...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCATTTGGGGAAATATTaGAGCTCTCGTGTAATAGGC +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNHLGKY*SSRVIG
Trigger: GCCTATTACACGAGAGCTGCAATATTTCCCCAAATG...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTCTGCAGGGCCACAGTaGAAGATAGAGCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLSAGPQ*KIEPSK
Trigger: TTTAGAAGGCTCTATCTTCCACTGTGGCCCTGCAGA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCAGTTCACACTTCCTATaGAGAAAAACACTTTACAGC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPSSHFL*RKTLYS
Trigger: GCTGTAAAGTGTTTTTCTCCATAGGAAGTGTGAACT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAATCTTGAGGGGTTCTTaGACGATAAAAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIILRGS*TIKTAC
Trigger: ACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGAT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCCTAGCTGTAAGACTTTaGAGCATTTACCAAACACAT +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPLAVRL*SIYQTH
Trigger: ATGTGTTTGGTAAATGCTCCAAAGTCTTACAGCTAG...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAGAAAGGAACAGCAAATaGAAACAGAAGGTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLERNSK*KQKVAL
Trigger: CAAAGCTACCTTCTGTTTCCATTTGCTGTTCCTTTC...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATAATCAGGGGTGGTCCTaGGTTAGAGGTCCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDNQGWS*VRGPRK
Trigger: CTTTCTGGGACCTCTAACCCAGGACCACCCCTGATT...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCTTCTTCCTCAGTATTaGACAGGGAGAAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNLLPQY*TGRRKT
Trigger: TGTCTTTCTTCTCCCTGTCCAATACTGAGGAAGAAG...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGATCCAAAACTAACATGTaGTGCTTGACCCAGTATATA +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGSKTNM*CLTQYI
Trigger: TATATACTGGGTCAAGCACCACATGTTAGTTTTGGA...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp CTTTGGAGCATTTACCAAACACATCTTGAGGGGTTCTaGGACGATAAAAACTGCATGTGTTCCATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LWSIYQTHLEGF*DDKNCMCSIKL
Trigger: GAGCTTTATGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAATGCTCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCAATTGCCTGACAAATTaGCTTGATCTGTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVINCLTN*LDLCWS
Trigger: ACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATT...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACCCGATCTGAGGGCTTaGGATGCTCATGGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILPDLRA*DAHGKK
Trigger: TTTCTTACCATGAGCATCTCAAGCCCTCAGATCGGG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACATTTGTTCCTGTTCCATaGGAAAGTCCACGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTFVPVP*ESPRSA
Trigger: GGCAGAGCGTGGACTTTCTCATGGAACAGGAACAAA...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCATGTGGGGAGTCATCTaGAAGCTGCTATTTATGTGG +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLMWGVI*KLLFMW
Trigger: CCACATAAATAGCAGCTTTCAGATGACTCCCCACAT...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTTCAGGTCTCAAGGATaGATTGTGAAAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIFRSQG*IVKGTA
Trigger: TGCTGTTCCTTTCACAATTCATCCTTGAGACCTGAA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTCACTTTGAGATACTaGGCTTCAGCAAGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILLTLRY*ASASFP
Trigger: GGGGAAGCTTGCTGAAGCTCAGTATCTCAAAGTGAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAATTCATATGCGATATTaGCTCTCCTTAAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIIHMRY*LSLSQS
Trigger: AGACTGACTTAAGGAGAGTCAATATCGCATATGAAT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAATTCATATGCGATATTaGCTCTCCTTAAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLIHMRY*LSLSQS
Trigger: AGACTGACTTAAGGAGAGTCAATATCGCATATGAAT...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCTATTTTGGTACTTTCTaGAGATCTATGTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTYFGTF*RSMSKC
Trigger: GCACTTGGACATAGATCTTCAGAAAGTACCAAAATA...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCCTAACATGTGGTGCTTaGCCCAGTATATATTCACCA +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTLTCGA*PSIYSP
Trigger: TGGTGAATATATACTGGGTCAAGCACCACATGTTAG...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTACTAATGTGCAGTTTGTaGAATGTATCATTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLLMCSL*NVSLGR
Trigger: CCTTCCTAATGATACATTTCACAAACTGCACATTAG...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACGCATCTCTAAGCTTCTaGCTCTATCTTGCTTATAGA +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHASLSF*LYLAYR
Trigger: TCTATAAGCAAGATAGAGTCAGAAGCTTAGAGATGC...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAGACCTTGAGGTTGTCTaGCCTTCTGTCCAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTDLEVV*PSVQRV
Trigger: TACCCTTTGGACAGAAGGGCAGACAACCTCAAGGTC...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATGACCTTGAGGTTGTCTaGCCTTCTGTCCAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDDLEVV*PSVQRV
Trigger: TACCCTTTGGACAGAAGGGCAGACAACCTCAAGGTC...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGGGAAGCAGGATAAATaGCACCACCACCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILGKQDK*HHHPIL
Trigger: GAGAATAGGGTGGTGGTGGCATTTATCCTGCTTCCC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAAATAGCCAACTCACATaGAGCTCTTATACACTTGAA +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLNSQLT*SSYTLE
Trigger: TTCAAGTGTATAAGAGCTGCATGTGAGTTGGCTATT...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAACTAGTACTATCCCCTaGAGAACAACCAATAACAAA +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLTSTIP*RTTNNK
Trigger: TTTGTTATTGGTTGTTCTGCAGGGGATAGTACTAGT...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCGGTACTGCGGTTTCTTaGAAACCAGATAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLGTAVS*KPDKLW
Trigger: CCAAAGCTTATCTGGTTTCCAAGAAACCGCAGTACC...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGGAATTCAGCCTGATTaGGCTGCAGCAGGTCAATCA +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILGIQPD*AAAGQS
Trigger: TGATTGACCTGCTGCAGCCCAATCAGGCTGAATTCC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAATCCTTTCTCAAATCTaGCATCATGTTGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPILSQI*HHVAFT
Trigger: GGTGAAGGCAACATGATGCCAGATTTGAGAAAGGAT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCTTTGATATGACAACTTaGCTCAATGAGTATTACAGC +
Preference number: 4 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPFDMTT*LNEYYS
Trigger: GCTGTAATACTCATTGAGCCAAGTTGTCATATCAAA...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGATTTGATATGACAACTTaGCTCAATGAGTATTACAGC +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGFDMTT*LNEYYS
Trigger: GCTGTAATACTCATTGAGCCAAGTTGTCATATCAAA...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGATGTGTTCATTTAACATaGCTAGAAATCACAAACCCA +
Preference number: 4 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGCVHLT*LEITNP
Trigger: TGGGTTTGTGATTTCTAGCCATGTTAAATGAACACA...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGTTATCTTCTACAGATaGTTACTAATGGCTTCAACC +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIVIFYR*LLMAST
Trigger: GGTTGAAGCCATTAGTAACCATCTGTAGAAGATAAC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCATGGAGAGACACTTGTaGCAATTTCTAGGATTCTTA +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTMERHL*QFLGFL
Trigger: TAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCAT...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACACAAAAGAGATATTGTaGCTCTCGGGTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNTKEIL*LSGDSE
Trigger: TTCAGAATCACCCGAGAGCCACAATATCTCTTTTGT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCGGGTTGAATTTGATATaGCAACTTGGCTCAATGAGT +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIGLNLI*QLGSMS
Trigger: ACTCATTGAGCCAAGTTGTCATATCAAATTCAACCC...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACAATAAACTTAGAAAGTaGAACCCTGGGTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNNKLRK*NPGFES
Trigger: GGATTCAAACCCAGGGTTTCACTTTCTAAGTTTATT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAAGTGTTCACCGTTTCTaGAAGAATAAGAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPSVHRF*KNKRKV
Trigger: TACCTTCCTCTTATTCTTTCAGAAACGGTGAACACT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAAATCTGGCATCATGTTaGCTTCACCTGCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILNLASC*LHLPDS
Trigger: GGAATCAGGCAGGTGAAGGCAACATGATGCCAGATT...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGAGTCATCTGAAAGCTaGTATTTATGTGGTATCACC +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTESSES*YLCGIT
Trigger: GGTGATACCACATAAATAGCAGCTTTCAGATGACTC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACTTGGACGATAAAAACTaGATGTGTTCCATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNLDDKN*MCSIKL
Trigger: GAGCTTTATGGAACACATGCAGTTTTTATCGTCCAA...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAGTTTCCAAAATGTCTTaGTATCAAAGCATAATGCAG +
Preference number: 4 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLVSKMS*YQSIMQ
Trigger: CTGCATTATGCTTTGATAGCAAGACATTTTGGAAAC...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCGTTTCCAAAATGTCTTaGTATCAAAGCATAATGCAG +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTVSKMS*YQSIMQ
Trigger: CTGCATTATGCTTTGATAGCAAGACATTTTGGAAAC...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACGTTAAAGAAATAAGCTaGCACTGGAAGAGATGCAAT +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHVKEIS*HWKRCN
Trigger: ATTGCATCTCTTCCAGTGGCAGCTTATTTCTTTAAC...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCAGCACAGGGCTCTTTaGACCACTAATGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDQHRAL*TTNGFP
Trigger: AGGAAAACCATTAGTGGTGCAAAGAGCCCTGTGCTG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAGCCTGCCTTCTCATTTaGTTTCCTTGCCAAATTTAT +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPACLLI*FPCQIY
Trigger: ATAAATTTGGCAAGGAAAGCAAATGAGAAGGCAGGC...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACAGATCTATGTCCAAGTaGAAGACTTTAAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHRSMSK*KTLKPS
Trigger: AGATGGCTTTAAAGTCTTGCACTTGGACATAGATCT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAGCACACCAGCTAACTTaGTCCAGTGATCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTAHQLT*SSDHVF
Trigger: AAAGACGTGATCACTGGAGCAAGTTAGCTGGTGTGC...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCATACATCAGGGGGAATaGTTTCCTCTTCTTTATGGC +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLIHQGE*FPLLYG
Trigger: GCCATAAAGAAGAGGAAACCATTCCCCCTGATGTAT...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATAAAGACGCTGAAGAGTaGGAATTCAGCCTGATTGGG +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDKDAEE*EFSLIG
Trigger: CCCAATCAGGCTGAATTCCCACTCTTCAGCGTCTTT...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACATCTGCAGGGCCACAGTaGAAGATAGAGCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTSAGPQ*KIEPSK
Trigger: TTTAGAAGGCTCTATCTTCCACTGTGGCCCTGCAGA...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGTTGTTACCTTTCTTTaGTCAGATTCTTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIVVTFL*SDSLRM
Trigger: CATTCTCAAAGAATCTGACCAAAGAAAGGTAACAAC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCACACACAAATCAAAATaGTTAGCACATCATCATCAG +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTTHKSK*LAHHHQ
Trigger: CTGATGATGATGTGCTAACCATTTTGATTTGTGTGT...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAGAAATAAGCTGCCACTaGAAGAGATGCAATTTAGCA +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPEISCH*KRCNLA
Trigger: TGCTAAATTGCATCTCTTCCAGTGGCAGCTTATTTC...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATACTTTTCTTGAGTTATTaGCACTGTAATCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSILFLSY*HCNPLF
Trigger: GAACAAAGGATTACAGTGCCAATAACTCAAGAAAAG...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACTACCAGGTTTATTTATaGAGGGGAAGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNYQVYL*RGSRIN
Trigger: ATTTATCCTGCTTCCCCTCCATAAATAAACCTGGTA...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACGTTATCTTCTACAGATaGTTACTAATGGCTTCAACC +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHVIFYR*LLMAST
Trigger: GGTTGAAGCCATTAGTAACCATCTGTAGAAGATAAC...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAAGCTCATGGTACTGCTaGGCTGCATTTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTSSWYC*AAFGEI
Trigger: TATTTCCCCAAATGCAGCCCAGCAGTACCATGAGCT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCACAAAGTTTTTCTTATaGAGAGACACTTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTTKFFL*RDTCGN
Trigger: ATTGCCACAAGTGTCTCTCCATAAGAAAAACTTTGT...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CCA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACTCCAAAACTAACATGTaGTGCTTGACCCAGTATATA +
Preference number: 4 (lower is better)
Translates to: VLQPISSGPCILEGKVTNSKTNM*CLTQYI
Trigger: TATATACTGGGTCAAGCACCACATGTTAGTTTTGGA...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp GTGCTTGACCCAGTATATATTCACCAGTATATGGCTTaGCAAAGTGCTCCCCCTAATAATTTGATTCTACGA +
Preference number: 4 (lower is better)
Translates to: VLDPVYIHQYMA*QSAPPNNLILR
Trigger: TCGTAGAATCAAATTATTAGGGGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp CTGGGAAATACACATTCCAAAACTAACATGTGGTGCTaGACCCAGTATATATTCACCAGTATATGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LGNTHSKTNMWC*TQYIFTSIWLC
Trigger: GCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCACATGTTAGTTTTGGAATGTGTATTTCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCGACAACTTGGCTCAATaGGTATTACAGCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLDNLAQ*VLQPIS
Trigger: AGAAATTGGCTGTAATACTCATTGAGCCAAGTTGTC...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACACTCTGCATAATGAAGTaGCAGATGCTCCTACAGTGT +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTLCIMK*QMLLQC
Trigger: ACACTGTAGGAGCATCTGTCACTTCATTATGCAGAG...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCTCTGCATAATGAAGTaGCAGATGCTCCTACAGTGT +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDLCIMK*QMLLQC
Trigger: ACACTGTAGGAGCATCTGTCACTTCATTATGCAGAG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCATTTCCTACTCAATCTaGTATATGCAATTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIISYSI*YMQLPL
Trigger: CAGTGGCAATTGCATATATCAGATTGAGTAGGAAAT...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCATCTTTGAGAATGTTATaGATGCTAGAGATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPSLRML*MLEILV
Trigger: GACAAGGATCTCTAGCATTCATAACATTCTCAAAGA...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCCAGTCTCCCCATTATTaGGAGACTATTTCAATGTAT +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTQSPHY*ETISMY
Trigger: ATACATTGAAATAGTCTCTCAATAATGGGGAGACTG...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGCCTGCTCCTTTTCTTaGGTTATTGGCACTGTAATC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILACSFS*VIGTVI
Trigger: GATTACAGTGCCAATAACTCAAGAAAAGGAGCAGGC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTTACCACATTCAATATaGACCAAATTCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVILPHSI*TKFSSR
Trigger: TCTGCTGCTGAATTTGGTTCATATTGAATGTGGTAA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACCTCAAACATGGTCTTTaGTTAGATTTGACACACAAA +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHLKHGL*LDLTHK
Trigger: TTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAG...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACATGCCACTGGAAGAGATaGAATTTAGCACAGACCAAG +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTCHWKR*NLAQTK
Trigger: CTTGGTCTGTGCTAAATTGCATCTCTTCCAGTGGCA...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAAATAGCCAACTCACATaGAGCTCTTATACACTTGAA +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPNSQLT*SSYTLE
Trigger: TTCAAGTGTATAAGAGCTGCATGTGAGTTGGCTATT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACATCTTTAAAACTGACTaGTATGTCACAGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHIFKTD*YVTATS
Trigger: TGAAGTAGCTGTGACATAGCAGTCAGTTTTAAAGAT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAACTAGTACTATCCCCTaGAGAACAACCAATAACAAA +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPTSTIP*RTTNNK
Trigger: TTTGTTATTGGTTGTTCTGCAGGGGATAGTACTAGT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCAAACCAGATAAGCTTTaGCAAACAGATAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIKPDKL*QTDRQF
Trigger: GAATTGCCTATCTGTTTGCCAAAGCTTATCTGGTTT...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCAAAAGCAATGTTGTCTaGTATACAGCAGATGTTCCA +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTKSNVV*YTADVP
Trigger: TGGAACATCTGCTGTATACCAGACAACATTGCTTTT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACACACACAAATCAAAATaGTTAGCACATCATCATCAG +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHTHKSK*LAHHHQ
Trigger: CTGATGATGATGTGCTAACCATTTTGATTTGTGTGT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCATACCAGGTTTATTTATaGAGGGGAAGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPYQVYL*RGSRIN
Trigger: ATTTATCCTGCTTCCCCTCCATAAATAAACCTGGTA...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACACAAAGTTTTTCTTATaGAGAGACACTTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHTKFFL*RDTCGN
Trigger: ATTGCCACAAGTGTCTCTCCATAAGAAAAACTTTGT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp CCAAATTTATACCAATATTACACGGGCTCGGCAAATTaGAGGCTCAGTCATTTAGCTATTAATTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: PNLYQYYTGSAN*RLSHLAINLGQ
Trigger: CTGTCCCAAATTAATAGCTAAATGACTGAGCCTCAAATTTGCCGAGCCCGTGTAATATTGGTATAAATTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp ACTGCTAGAGAGTCTATGTGCAACTCATGTTACATTTaGCATTTTCAAGAACATAGGGATTCTACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TARESMCNSCYI*HFQEHRDSTAA
Trigger: AGCAGCAGTAGAATCCCTATGTTCTTGAAAATGCAAAATGTAACATGAGTTGCACATAGACTCTCTAGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATGAGTCCAGAATTGCCTaGCAAATTGACTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDESRIA*QIDLIC
Trigger: ACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTC...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATTGGTTGCGATACCATTaGATGTGGCTTATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDWLRYH*MWLMWK
Trigger: TTTCCACATAAGCCACATTCAATGGTATCGCAACCA...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTATATACTTCAGCAACCTaGCAATCCATTCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILYTSAT*QSIPHS
Trigger: GCTATGAGGAATGGATTGTCAGGTTGCTGAAGTATA...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACATTCAGGTCTCAAGGATaGATTGTGAAAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTFRSQG*IVKGTA
Trigger: TGCTGTTCCTTTCACAATTCATCCTTGAGACCTGAA...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACTACAAACTGATGACTaGAACAGGCTTGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTLQTDD*NRLGQN
Trigger: ATTTTGCCCAAGCCTGTTTCAGTCATCAGTTTGTAG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAATCCACAACTCACTTTaGGATACTGAGCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTIHNSL*DTELQQ
Trigger: TTGCTGAAGCTCAGTATCTCAAAGTGAGTTGTGGAT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTTACCACATTCAATATaGACCAAATTCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLLPHSI*TKFSSR
Trigger: TCTGCTGCTGAATTTGGTTCATATTGAATGTGGTAA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACTAACATGTGGTGCTTaGCCCAGTATATATTCACCA +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTLTCGA*PSIYSP
Trigger: TGGTGAATATATACTGGGTCAAGCACCACATGTTAG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAGCTAACTTGCTCCAGTaGTCACGTCTTTCTGTATTA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTANLLQ*SRLSVL
Trigger: TAATACAGAAAGACGTGATCACTGGAGCAAGTTAGC...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCAAAACTAACATGTGGTaGTTGACCCAGTATATATTC +
Preference number: 4 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTKTNMW*LTQYIF
Trigger: GAATATATACTGGGTCAAGCACCACATGTTAGTTTT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTTAACTCTGCATTTGTaGCAAGGCAAATATATTGCA +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVILTLHL*QGKYIA
Trigger: TGCAATATATTTGCCTTGGCACAAATGCAGAGTTAA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAATTCTGATGAGCATTTaGAAGTTGATCCTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: FTKHILRGSWTIKTACVPILMSI*KLILLS
Trigger: ACTAAGAAGGATCAACTTGCAAATGCTCATCAGAAT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTGTGTTCATTTAACATaGCTAGAAATCACAAACCCA +
Preference number: 4 (lower is better)
Translates to: LKKHREIYSSKPLFYSVICVHLT*LEITNP
Trigger: TGGGTTTGTGATTTCTAGCCATGTTAAATGAACACA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCTTTAAAGCCATCTGTTaGTTTCAATTTAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLFKAIC*FQFRRW
Trigger: CCACCTCCTAAATTGAAACCAACAGATGGCTTTAAA...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAATATTCACCAGTATATaGCTTTGCAAAGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTIFTSI*LCKVLP
Trigger: GGGGAGCACTTTGCAAAGCCATATACTGGTGAATAT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp CTCTGCAGTTTTAAGATGAATTGTGGTATCTTTATTTaGCAGATCCTTTCTCAAATCTGGCATCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: LCSFKMNCGIFI*QILSQIWHHVA
Trigger: GGCAACATGATGCCAGATTTGAGAAAGGATCTGCAAAATAAAGATACCACAATTCATCTTAAAACTGCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp ATGTTCAAAGTTGAGAAAGCTGTACCTTTTCAAAGATaGGGCCGTCCTTCCTTAACAGATTCTAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: MFKVEKAVPFQR*GRPSLTDSKTK
Trigger: TTTGGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTTCTCAACTTTGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACATTTCCCCTTTTCCTATaGTCCCTTGTTTCACATCTA +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTFPLFL*SLVSHL
Trigger: TAGATGTGAAACAAGGGATCATAGGAAAAGGGGAAA...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGACAACTTGGCTCAATaGGTATTACAGCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTDNLAQ*VLQPIS
Trigger: AGAAATTGGCTGTAATACTCATTGAGCCAAGTTGTC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAATTAAAAGGAGCTCCTaGGCTAAATCAGTCTATTCC +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTIKRSS*AKSVYS
Trigger: GGAATAGACTGATTTAGCTCAGGAGCTCCTTTTAAT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACGTGGTTCTGAGACTTaGATTAAAGTGCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILRGSET*IKVQIK
Trigger: TTTGATCTGCACTTTAATTCAAGTCTCAGAACCACG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAAGTGTTCACCGTTTCTaGAAGAATAAGAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTSVHRF*KNKRKV
Trigger: TACCTTCCTCTTATTCTTTCAGAAACGGTGAACACT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACACCAGATGTTCAAAGTTaGGAAAGCTGTACCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTPDVQS*ESCTFS
Trigger: TGAAAAGGTACAGCTTTCTCAACTTTGAACATCTGG...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATGCATCTCTAAGCTTCTaGCTCTATCTTGCTTATAGA +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDASLSF*LYLAYR
Trigger: TCTATAAGCAAGATAGAGTCAGAAGCTTAGAGATGC...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAGAGTCATCTGAAAGCTaGTATTTATGTGGTATCACC +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTESSES*YLCGIT
Trigger: GGTGATACCACATAAATAGCAGCTTTCAGATGACTC...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATAGACTTGAATTAAAGTaGAGATCAAACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDRLELK*RSNSPQ
Trigger: CTGGGGTGAGTTTGATCTGCACTTTAATTCAAGTCT...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGAAAGGAACAGCAAATaGAAACAGAAGGTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTERNSK*KQKVAL
Trigger: CAAAGCTACCTTCTGTTTCCATTTGCTGTTCCTTTC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAGAAATAAGCTGCCACTaGAAGAGATGCAATTTAGCA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTEISCH*KRCNLA
Trigger: TGCTAAATTGCATCTCTTCCAGTGGCAGCTTATTTC...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACATTATTATTACTACAGTaGCCCCTAAAAGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTLLLLQ*PLKVAE
Trigger: CTCTGCCACTTTTAGGGGCCACTGTAGTAATAATAA...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAACAAAAGAGATATTGTaGCTCTCGGGTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTTKEIL*LSGDSE
Trigger: TTCAGAATCACCCGAGAGCCACAATATCTCTTTTGT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTATTTATAACAACCCTGTaGAGTAGACAGGGTGATTAT +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILFITTL*SRQGDY
Trigger: ATAATCACCCTGTCTACTTCACAGGGTTGTTATAAA...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATTATTTTGGTACTTTCTaGAGATCTATGTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDYFGTF*RSMSKC
Trigger: GCACTTGGACATAGATCTTCAGAAAGTACCAAAATA...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCAAAGACAAAACGGATaGTCTAAATCAATCCACATG +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDQRQNG*SKSIHM
Trigger: CATGTGGATTGATTTAGATCATCCGTTTTGTCTTTG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACAAAGACAAAACGGATaGTCTAAATCAATCCACATG +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTQRQNG*SKSIHM
Trigger: CATGTGGATTGATTTAGATCATCCGTTTTGTCTTTG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACACCTCAATGGGTTTTaGCTAAAGATTAATGTCATG +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTHLNGF*LKINVM
Trigger: CATGACATTAATCTTTAGTCAAAACCCATTGAGGTG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR TCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACACACCTCAATGGGTTTTaGCTAAAGATTAATGTCATG +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTHLNGF*LKINVM
Trigger: CATGACATTAATCTTTAGTCAAAACCCATTGAGGTG...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATAATTCTAGCAGACACTaGTGCTGTATTTGTGAAACT +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDNSSRH*CCICET
Trigger: AGTTTCACAAATACAGCAGCAGTGTCTGCTAGAATT...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAAAACCAGATAAGCTTTaGCAAACAGATAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILKPDKL*QTDRQF
Trigger: GAATTGCCTATCTGTTTGCCAAAGCTTATCTGGTTT...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTAGCTGTAAGACTTTaGAGCATTTACCAAACACAT +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILLAVRL*SIYQTH
Trigger: ATGTGTTTGGTAAATGCTCCAAAGTCTTACAGCTAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAATGGAGAGACACTTGTaGCAATTTCTAGGATTCTTA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTMERHL*QFLGFL
Trigger: TAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCAT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTATTTAAAGCCATCTGTTaGTTTCAATTTAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILFKAIC*FQFRRW
Trigger: CCACCTCCTAAATTGAAACCAACAGATGGCTTTAAA...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp ATGGAAACAGAAGGTAGCTTTGAGGGAAAGTTTATTTaGTTCACTATTGTATCCCCAGATTCTAGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: METEGSFEGKFI*FTIVSPDSSLE
Trigger: TTCTAGACTAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTTCTGTTTCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
3UTR CAA 72 bp AATTTAGGAGGTGGTTGTTCTAGAACAAAAGAGATATaGTGGCTCTCGGGTGATTCTGAATACAAAGATAAA +
Preference number: 4 (lower is better)
Translates to: NLGGGCSRTKEI*WLSGDSEYKDK
Trigger: TTTATCTTTGTATTCAGAATCACCCGAGAGCCACAATATCTCTTTTGTTCTAGAACAACCACCTCCTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTCAAACATGGTCTTTaGTTAGATTTGACACACAAA +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILLKHGL*LDLTHK
Trigger: TTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR GCA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAATTCTGATGAGCATTTaGAAGTTGATCCTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: SFSYGETLVAISRILIDTILMSI*KLILLS
Trigger: ACTAAGAAGGATCAACTTGCAAATGCTCATCAGAAT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATGACAATACTCAAACATaGTCTTTGCTTAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDDNTQT*SLLRFD
Trigger: GTCAAATCTAAGCAAAGACCATGTTTGAGTATTGTC...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAGACAATACTCAAACATaGTCTTTGCTTAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: KVALRESLFCSLLYPQILDNTQT*SLLRFD
Trigger: GTCAAATCTAAGCAAAGACCATGTTTGAGTATTGTC...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACACTTTTCTTGAGTTATTaGCACTGTAATCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTLFLSY*HCNPLF
Trigger: GAACAAAGGATTACAGTGCCAATAACTCAAGAAAAG...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATCAGGCCTCGATTCATTaGTACTTTCAATTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: DKILGKGSTYALHNEVTDQASIH*YFQLKK
Trigger: TTTCTTTAATTGAAAGTACCAATGAATCGAGGCCTG...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CCA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACACAGGCCTCGATTCATTaGTACTTTCAATTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTQASIH*YFQLKK
Trigger: TTTCTTTAATTGAAAGTACCAATGAATCGAGGCCTG...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS GCA 90 bp GCTACTCCATGGCAAATCCCAGGCCCCTTCTTTAGCAGGCCTTTCTaGCATGTGAGTTCCCCACACCGAATACATGTGTCCAGGTACTGC +
Preference number: 5 (lower is better)
Translates to: ATPWQIPGPFFSRPF*HVSSPHRIHVSRYC
Trigger: GCAGTACCTGGACACATGTATTCGGTGTGGGGAACTCACATGGCAGAAAGGCCTGCTAAAGAAGGGGCCTGGGATTTGCCATGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS CCA 90 bp GTGCACCAGCTCATTCTCTCTCTCGATGGTCTCGCCGAGCTCAGGTaGCCAGTTGCAGTTTTGTTCCTGTTCCATGAGAAAGTCCACGCT +
Preference number: 5 (lower is better)
Translates to: VHQLILSLDGLAELR*PVAVLFLFHEKVHA
Trigger: AGCGTGGACTTTCTCATGGAACAGGAACAAAACTGCAACTGGCCACCTGAGCTCGGCGAGACCATCGAGAGAGAGAATGAGCTGGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 90 bp CATGGCAAATCCCAGGCCCCTTCTTTAGCAGGCCTTTCTGCCATGTaGGTTCCCCACACCGAATACATGTGTCCAGGTACTGCGGTTTCT +
Preference number: 5 (lower is better)
Translates to: HGKSQAPSLAGLSAM*VPHTEYMCPGTAVS
Trigger: AGAAACCGCAGTACCTGGACACATGTATTCGGTGTGGGGAACTCACATGGCAGAAAGGCCTGCTAAAGAAGGGGCCTGGGATTTGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS-3UTR CAA 90 bp TGTGGAAACTGCCTCGGCTTGGCTCAGGGGATCTCTGCAGGGCCACAGTGGAAGTGCCTGCCTTCTCATTaGCTTTCCTTGCCAAATTTA +
Preference number: 5 (lower is better)
Translates to: CGNCLGLAQGISAGPQWKCLPSH*LSLPNL
Trigger: TAAATTTGGCAAGGAAAGCAAATGAGAAGGCAGGCA...CTTCCACTGTGGCCCTGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGGAAACTGCCTCGGCTaGGCTCAGGGGATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIGNCLG*AQGISA
Trigger: TGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS TCA 90 bp CTTTATGGCATACTGCTTCCCAGAGTCCAGAATTGCCTGACAAATTaGCTTGATCTGTGCTGGAGTCAGCACCTCCTGGGCGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LYGILLPRVQNCLTN*LDLCWSQHLLGEFL
Trigger: CAGAAACTCGCCCAGGAGGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGCAGTATGCCATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 90 bp TTCCTCTTCTTTATGGCATACTGCTTCCCAGAGTCCAGAATTGCCTaGCAAATTGACTTGATCTGTGCTGGAGTCAGCACCTCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: FLFFMAYCFPESRIA*QIDLICAGVSTSWA
Trigger: CGCCCAGGAGGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGCAGTATGCCATAAAGAAGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTACTGTTGCTGCTGACCTaGAGGTTGTCTGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLLLLLT*RLSALL
Trigger: CAGAAGGGCAGACAACCTCAAGGTCAGCAGCAACAG...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAAGCTCAGGTGGCCAGTaGCAGTTTTGTTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLSSGGQ*QFCSCS
Trigger: GGAACAGGAACAAAACTGCAACTGGCCACCTGAGCT...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCGGAAACTGCCTCGGCTaGGCTCAGGGGATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLGNCLG*AQGISA
Trigger: TGCAGAGATCCCCTGAGCCAAGCCGAGGCAGTTTCC...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCTCTACAGACCTGGCTaGCCTGCTCCTTTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTLYRPG*PAPFLE
Trigger: CTCAAGAAAAGGAGCAGGCAAGCCAGGTCTGTAGAG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAACGGGCTCGGCAAATTaGAGGCTCAGTCATTTAGCT +
Preference number: 5 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGTGSAN*RLSHLA
Trigger: AGCTAAATGACTGAGCCTCAAATTTGCCGAGCCCGT...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCACGGGCTCGGCAAATTaGAGGCTCAGTCATTTAGCT +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPTGSAN*RLSHLA
Trigger: AGCTAAATGACTGAGCCTCAAATTTGCCGAGCCCGT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAGAGAAGAAGGAGAAGTaGGTGAATCAGGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLEKKEK*VNQGWS
Trigger: GGACCACCCCTGATTCACCAACTTCTCCTTCTTCTC...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCTGCTGACCTTGAGGTaGTCTGCCCTTCTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTLLTLR*SALLSK
Trigger: TTTGGACAGAAGGGCAGACAACCTCAAGGTCAGCAG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CAA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACAGCTCAGGTGGCCAGTaGCAGTTTTGTTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VLQPISSGPCILEGKVTNSSGGQ*QFCSCS
Trigger: GGAACAGGAACAAAACTGCAACTGGCCACCTGAGCT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCAGTGGACCCTGTATCTaGGAAGGTAAGGTAACCAAC +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPSGPCI*EGKVTN
Trigger: GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCAAAATATAAAAATATaGGGAGGCCGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTQNIKI*GGRGGR
Trigger: CCGCCCGCCTCGGCCTCCCAATATTTTTATATTTTG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS CCA 90 bp TGCCCCCAAGTATTCGGTTCCATAGTAAGAATACATCAGGGGGAATaGTTTCCTCTTCTTTATGGCATACTGCTTCCCAGAGTCCAGAAT +
Preference number: 5 (lower is better)
Translates to: CPQVFGSIVRIHQGE*FPLLYGILLPRVQN
Trigger: ATTCTGGACTCTGGGAAGCAGTATGCCATAAAGAAGAGGAAACCATTCCCCCTGATGTATTCTTACTATGGAACCGAATACTTGGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS-3UTR CAA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGAGAAGAAGGAGAAGTaGGTGAATCAGGGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTEKKEK*VNQGWS
Trigger: GGACCACCCCTGATTCACCAACTTCTCCTTCTTCTC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGCATTTGGGGAAATATaGCAGCTCTCGTGTAATAGG +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPAFGEI*QLSCNR
Trigger: CCTATTACACGAGAGCTGCAATATTTCCCCAAATGC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACACTGCTGGGCTGCATTaGGGGAAATATTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VLQPISSGPCILEGKVTNTAGLH*GKYCSS
Trigger: AGAGCTGCAATATTTCCCCAAATGCAGCCCAGCAGT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAGTACCTTTTCAAAGATaGGGCCGTCCTTCCTTAACA +
Preference number: 5 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGVPFQR*GRPSLT
Trigger: TGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTAC...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGTACCTTTTCAAAGATaGGGCCGTCCTTCCTTAACA +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPVPFQR*GRPSLT
Trigger: TGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTAC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATACACCAGTATATGGCTTaGCAAAGTGCTCCCCCTAAT +
Preference number: 5 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIHQYMA*QSAPPN
Trigger: ATTAGGGGGAGCACTTTGCAAAGCCATATACTGGTG...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCACAACTGAGGCCAATTaGATATGGTTGTATCTGAGG +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPTTEAN*IWLYLR
Trigger: CCTCAGATACAACCATATCAAATTGGCCTCAGTTGT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCCATCTTGAGGGGTTCTaGGACGATAAAAACTGCATG +
Preference number: 5 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTHLEGF*DDKNCM
Trigger: CATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATG...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGATTTACCAAACACATCTaGAGGGGTTCTTGGACGATA +
Preference number: 5 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGFTKHI*RGSWTI
Trigger: TATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGACTTATGGAGAGACACTaGTGGCAATTTCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGLMERH*WQFLGF
Trigger: GAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAG...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACCAGTATATGGCTTaGCAAAGTGCTCCCCCTAAT +
Preference number: 5 (lower is better)
Translates to: VLQPISSGPCILEGKVTNHQYMA*QSAPPN
Trigger: ATTAGGGGGAGCACTTTGCAAAGCCATATACTGGTG...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACCATCTTGAGGGGTTCTaGGACGATAAAAACTGCATG +
Preference number: 5 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHHLEGF*DDKNCM
Trigger: CATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATG...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACCACAGAATTCACAGTGAAACCCTGGGTTaGAATCCTGGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: ISSGPCILEGKVTNHRIHSETLG*NPGFVL
Trigger: AAGGACAAAACCAGGATTCAAACCCAGGGTTTCACT...GTGAATTCTGTGGTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATATGCCTGCCTTCTCATTaGCTTTCCTTGCCAAATTTA +
Preference number: 5 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSICLPSH*LSLPNL
Trigger: TAAATTTGGCAAGGAAAGCAAATGAGAAGGCAGGCA...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTGTTGCTGCTGACCTaGAGGTTGTCTGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: KVALRESLFCSLLYPQILLLLLT*RLSALL
Trigger: CAGAAGGGCAGACAACCTCAAGGTCAGCAGCAACAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGCAAACAGGAAGACTTaGCAAACTGTTTTCATAACC +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPANRKT*QTVFIT
Trigger: GGTTATGAAAACAGTTTGCAAAGTCTTCCTGTTTGC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAAGAACAAAAGAGATATaGTGGCTCTCGGGTGATTCT +
Preference number: 5 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIRTKEI*WLSGDS
Trigger: AGAATCACCCGAGAGCCACAATATCTCTTTTGTTCT...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGCACACTGTCCCAGAGAAGCCTTCATACAAGCTGTATATACTTTCAAGGACCAGAACAAAAGAGATATaGTGGCTCTCGGGTGATTCT +
Preference number: 5 (lower is better)
Translates to: KHTVPEKPSYKLYILSRTRTKEI*WLSGDS
Trigger: AGAATCACCCGAGAGCCACAATATCTCTTTTGTTCT...GGTCCTTGAAAGTATATACAGCTTGTATGAAGGCTTCTCTGGGACAGTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378621.7
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAATGAGCATTTGCAAGTaGATCCTTCTTAGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLMSICK*ILLSLH
Trigger: GTGCAGACTAAGAAGGATCAACTTGCAAATGCTCAT...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS TCA 90 bp TCTGGTATACAGCAGATGTTCCATCTTTATCAAGTTTACAGGGAATaGACTTTGAGCTCGGTAGATGTATTTAGAGTTTCCCGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: SGIQQMFHLYQVYRE*TLSSVDVFRVSREP
Trigger: CGGCTCACGGGAAACTCTAAATACATCTACCGAGCTCAAAGTTCATTCCCTGTAAACTTGATAAAGATGGAACATCTGCTGTATACCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378621.7
ENST00000614025.4
CDS CCA 90 bp TTCCATAGTAAGAATACATCAGGGGGAATGGTTTCCTCTTCTTTATaGCATACTGCTTCCCAGAGTCCAGAATTGCCTGACAAATTGACT +
Preference number: 5 (lower is better)
Translates to: FHSKNTSGGMVSSSL*HTASQSPELPDKLT
Trigger: AGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGCAGTATGCCATAAAGAAGAGGAAACCATTCCCCCTGATGTATTCTTACTATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS-3UTR CAA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCATGGCCAGTTGCAGTTTaGTTCCTGTTCCATGAGAAA +
Preference number: 5 (lower is better)
Translates to: FTKHILRGSWTIKTACVPWPVAV*FLFHEK
Trigger: TTTCTCATGGAACAGGAACAAAACTGCAACTGGCCA...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGGTAATCCAGCTGTACTGAGGCTGGAACTCTTAGCTAAGAACAGACATGGAGTCTACACTTGCAGTTaGGTTTTCTATGTCATAACT +
Preference number: 5 (lower is better)
Translates to: KGNPAVLRLELLAKNRHGVYTCS*VFYVIT
Trigger: AGTTATGACATAGAAAACCAAACTGCAAGTGTAGAC...TCCATGTCTGTTCTTAGCTAAGAGTTCCAGCCTCAGTACAGCTGGATTACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACACAACTGAGGCCAATTaGATATGGTTGTATCTGAGG +
Preference number: 5 (lower is better)
Translates to: VLQPISSGPCILEGKVTNTTEAN*IWLYLR
Trigger: CCTCAGATACAACCATATCAAATTGGCCTCAGTTGT...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCGGTCTTTGCTTAGATTaGACACACAAATCAAAATGG +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPGLCLD*THKSKW
Trigger: CCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACC...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTGGTGCTTGACCCAGTATATATTCACCAGTATATGGCTTTGCAAAGTGCTCCCACTCAAACATGGTCTTaGCTTAGATTTGACACACAA +
Preference number: 5 (lower is better)
Translates to: VVLDPVYIHQYMALQSAPTQTWS*LRFDTQ
Trigger: TTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT...GGGAGCACTTTGCAAAGCCATATACTGGTGAATATATACTGGGTCAAGCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATATGGCACTGTAATCCTTaGTTCTCAGCAAGCAAAATA +
Preference number: 5 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIWHCNP*FSASKI
Trigger: TATTTTGCTTGCTGAGAACAAAGGATTACAGTGCCA...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTCTACAGACCTGGCTaGCCTGCTCCTTTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: KVALRESLFCSLLYPQILLYRPG*PAPFLE
Trigger: CTCAAGAAAAGGAGCAGGCAAGCCAGGTCTGTAGAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACTGCTGACCTTGAGGTaGTCTGCCCTTCTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: KVALRESLFCSLLYPQILLLTLR*SALLSK
Trigger: TTTGGACAGAAGGGCAGACAACCTCAAGGTCAGCAG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAGCAAACAGGAAGACTTaGCAAACTGTTTTCATAACC +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLANRKT*QTVFIT
Trigger: GGTTATGAAAACAGTTTGCAAAGTCTTCCTGTTTGC...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCGCATTTGGGGAAATATaGCAGCTCTCGTGTAATAGG +
Preference number: 5 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIAFGEI*QLSCNR
Trigger: CCTATTACACGAGAGCTGCAATATTTCCCCAAATGC...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAACCCGAGAACCGGCCTaGAATTCCTCGGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: KVALRESLFCSLLYPQILTREPA*NSSVNK
Trigger: CTTATTTACCGAGGAATTCAAGGCCGGTTCTCGGGT...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAACCCGAGAACCGGCCTaGAATTCCTCGGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTTREPA*NSSVNK
Trigger: CTTATTTACCGAGGAATTCAAGGCCGGTTCTCGGGT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATATGTCATAGTCTACACTaGCAGTTTGGTTTTCTATGT +
Preference number: 5 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSICHSLH*QFGFLC
Trigger: ACATAGAAAACCAAACTGCAAGTGTAGACTATGACA...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAGGTCTTTGCTTAGATTaGACACACAAATCAAAATGG +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLGLCLD*THKSKW
Trigger: CCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACC...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAACTCAAACATGGTCTTaGCTTAGATTTGACACACAA +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLTQTWS*LRFDTQ
Trigger: TTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CCTTCTGATGGCAATGTTAAGGCTCATGGTTGCGATACCATTGAATGTGGCTTAGGTTTCCAAAATGTCTaGCTATCAAAGCATAATGCA +
Preference number: 5 (lower is better)
Translates to: PSDGNVKAHGCDTIECGLGFQNV*LSKHNA
Trigger: TGCATTATGCTTTGATAGCAAGACATTTTGGAAACC...TAAGCCACATTCAATGGTATCGCAACCATGAGCCTTAACATTGCCATCAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGATCCTTGTCCCCTCAAAATGAGCACACACACACACAAACAAACTGGTCCATAGGTTTCCAAAATGTCTaGCTATCAAAGCATAATGCA +
Preference number: 5 (lower is better)
Translates to: RSLSPQNEHTHTQTNWSIGFQNV*LSKHNA
Trigger: TGCATTATGCTTTGATAGCAAGACATTTTGGAAACC...TATGGACCAGTTTGTTTGTGTGTGTGTGTGCTCATTTTGAGGGGACAAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GTATTACAGCCAATTTCTAGTGGACCCTGTATCTTGGAAGGTAAGGTAACCAACGATTCATATGCGATATaGACTCTCCTTAAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: VLQPISSGPCILEGKVTNDSYAI*TLLKSV
Trigger: GACTGACTTAAGGAGAGTCAATATCGCATATGAATC...GTTGGTTACCTTACCTTCCAAGATACAGGGTCCACTAGAAATTGGCTGTAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCCTTATGGAGAGACACTaGTGGCAATTTCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: LKKHREIYSSKPLFYSVILMERH*WQFLGF
Trigger: GAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAG...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACAAAATATAAAAATATaGGGAGGCCGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: SFSYGETLVAISRILIDTQNIKI*GGRGGR
Trigger: CCGCCCGCCTCGGCCTCCCAATATTTTTATATTTTG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAACTAACATGTGGTGCTaGACCCAGTATATATTCACC +
Preference number: 5 (lower is better)
Translates to: FTKHILRGSWTIKTACVPTNMWC*TQYIFT
Trigger: GGTGAATATATACTGGGTCAAGCACCACATGTTAGT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCATGAGCATTTGCAAGTaGATCCTTCTTAGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIMSICK*ILLSLH
Trigger: GTGCAGACTAAGAAGGATCAACTTGCAAATGCTCAT...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ACTTTATCAATACTAGGAAACAGGAATGGGACTGTCCAATACAATAGCCAACTCATGGTTGCGATACCATaGAATGTGGCTTATGTGGAA +
Preference number: 5 (lower is better)
Translates to: TLSILGNRNGTVQYNSQLMVAIP*NVAYVE
Trigger: TTCCACATAAGCCACATTCAATGGTATCGCAACCAT...GAGTTGGCTATTGTATTGGACAGTCCCATTCCTGTTTCCTAGTATTGATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAAACATACTTGTAGGTTaGCTTTTTAGGCAACAGAGC +
Preference number: 5 (lower is better)
Translates to: FTKHILRGSWTIKTACVPNILVG*LFRQQS
Trigger: GCTCTGTTGCCTAAAAAGCAAACCTACAAGTATGTT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCGCAGTCTCCCCATTATaGAGAGACTATTTCAATGTA +
Preference number: 5 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTAVSPL*RDYFNV
Trigger: TACATTGAAATAGTCTCTCAATAATGGGGAGACTGC...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAAGCTGTACCTTTTCAAAGATTGGGCCGTCCTTCCTTAACAGATTCTAAAACCAACCCATTTGTTTCATaGAAGTTACTGAGGTTCGCT +
Preference number: 5 (lower is better)
Translates to: KAVPFQRLGRPSLTDSKTNPFVS*KLLRFA
Trigger: AGCGAACCTCAGTAACTTCAATGAAACAAATGGGTT...GGTTTTAGAATCTGTTAAGGAAGGACGGCCCAATCTTTGAAAAGGTACAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAAACCCATTTGTTTCATaGAAGTTACTGAGGTTCGCT +
Preference number: 5 (lower is better)
Translates to: FTKHILRGSWTIKTACVPNPFVS*KLLRFA
Trigger: AGCGAACCTCAGTAACTTCAATGAAACAAATGGGTT...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAGATTCATATGCGATATaGACTCTCCTTAAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: FTKHILRGSWTIKTACVPDSYAI*TLLKSV
Trigger: GACTGACTTAAGGAGAGTCAATATCGCATATGAATC...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp TTTACCAAACACATCTTGAGGGGTTCTTGGACGATAAAAACTGCATGTGTTCCAGAATTGAGCAAACCTTaGAGCTCGGTAGATGTATTT +
Preference number: 5 (lower is better)
Translates to: FTKHILRGSWTIKTACVPELSKP*SSVDVF
Trigger: AAATACATCTACCGAGCTCAAAGGTTTGCTCAATTC...TGGAACACATGCAGTTTTTATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378619.4
CDS-3UTR CAA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAAGTGAAACCCTGGGTTaGAATCCTGGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTSETLG*NPGFVL
Trigger: AAGGACAAAACCAGGATTCAAACCCAGGGTTTCACT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCGAGGGAAAGTTTATTTaGTTCACTATTGTATCCCCA +
Preference number: 5 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIEGKFI*FTIVSP
Trigger: TGGGGATACAATAGTGAACAAAATAAACTTTCCCTC...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp CTAAAGAAGCACAGGGAAATATACTCTAGCAAACCCCTGTTCTACTCAGTTATCTGGTTGAAATTCTTATaGGAAGTCATAACTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LKKHREIYSSKPLFYSVIWLKFL*EVITGH
Trigger: ATGCCCAGTTATGACTTCCAATAAGAATTTCAACCA...GATAACTGAGTAGAACAGGGGTTTGCTAGAGTATATTTCCCTGTGCTTCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAAATTGCATATGTGGTTaGCATTCGTGGCTCACAGCA +
Preference number: 5 (lower is better)
Translates to: SFSYGETLVAISRILIDTNCICG*HSWLTA
Trigger: TGCTGTGAGCCACGAATGCAAACCACATATGCAATT...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTAAATTGCATATGTGGTTaGCATTCGTGGCTCACAGCA +
Preference number: 5 (lower is better)
Translates to: KVALRESLFCSLLYPQILNCICG*HSWLTA
Trigger: TGCTGTGAGCCACGAATGCAAACCACATATGCAATT...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACATTTACCAAACACATCTaGAGGGGTTCTTGGACGATA +
Preference number: 5 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTFTKHI*RGSWTI
Trigger: TATCGTCCAAGAACCCCTCAAGATGTGTTTGGTAAA...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACAACTAACATGTGGTGCTaGACCCAGTATATATTCACC +
Preference number: 5 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTTNMWC*TQYIFT
Trigger: GGTGAATATATACTGGGTCAAGCACCACATGTTAGT...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp GACAAAATTCTAGGAAAAGGATCAACTTATGCTCTGCATAATGAAGTGACAGATAACATACTTGTAGGTTaGCTTTTTAGGCAACAGAGC +
Preference number: 5 (lower is better)
Translates to: DKILGKGSTYALHNEVTDNILVG*LFRQQS
Trigger: GCTCTGTTGCCTAAAAAGCAAACCTACAAGTATGTT...ATCTGTCACTTCATTATGCAGAGCATAAGTTGATCCTTTTCCTAGAATTTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACAGCAGTCTCCCCATTATaGAGAGACTATTTCAATGTA +
Preference number: 5 (lower is better)
Translates to: SFSYGETLVAISRILIDTAVSPL*RDYFNV
Trigger: TACATTGAAATAGTCTCTCAATAATGGGGAGACTGC...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACATGGCACTGTAATCCTTaGTTCTCAGCAAGCAAAATA +
Preference number: 5 (lower is better)
Translates to: SFSYGETLVAISRILIDTWHCNP*FSASKI
Trigger: TATTTTGCTTGCTGAGAACAAAGGATTACAGTGCCA...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTACCAGGCCTCGATTCATaGGTACTTTCAATTAAAGAA +
Preference number: 5 (lower is better)
Translates to: KVALRESLFCSLLYPQILPGLDS*VLSIKE
Trigger: TTCTTTAATTGAAAGTACCAATGAATCGAGGCCTGG...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AGTTTTTCTTATGGAGAGACACTTGTGGCAATTTCTAGGATTCTTATAGACACACCAGGCCTCGATTCATaGGTACTTTCAATTAAAGAA +
Preference number: 5 (lower is better)
Translates to: SFSYGETLVAISRILIDTPGLDS*VLSIKE
Trigger: TTCTTTAATTGAAAGTACCAATGAATCGAGGCCTGG...TGTGTCTATAAGAATCCTAGAAATTGCCACAAGTGTCTCTCCATAAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACATGTCATAGTCTACACTaGCAGTTTGGTTTTCTATGT +
Preference number: 5 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTCHSLH*QFGFLC
Trigger: ACATAGAAAACCAAACTGCAAGTGTAGACTATGACA...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp ACTCAAACATGGTCTTTGCTTAGATTTGACACACAAATCAAAATGGTTAGCACACAAACCACTATTTACTaGAAGCAGTTTCACAACTTC +
Preference number: 5 (lower is better)
Translates to: TQTWSLLRFDTQIKMVSTQTTIY*KQFHNF
Trigger: GAAGTTGTGAAACTGCTTCAAGTAAATAGTGGTTTG...TGTGCTAACCATTTTGATTTGTGTGTCAAATCTAAGCAAAGACCATGTTTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS-3UTR CAA 90 bp AAGGTAGCTTTGAGGGAAAGTTTATTTTGTTCACTATTGTATCCCCAGATTCTATGGTTGAAATTCTTATaGGAAGTCATAACTGGGCAT +
Preference number: 5 (lower is better)
Translates to: KVALRESLFCSLLYPQILWLKFL*EVITGH
Trigger: ATGCCCAGTTATGACTTCCAATAAGAATTTCAACCA...TAGAATCTGGGGATACAATAGTGAACAAAATAAACTTTCCCTCAAAGCTACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378619.4
ENST00000378621.7
CDS CCA 72 bp CATGGCACCAGTGCACCAGCTCATTCTCTCTCTCGATaGTCTCGCCGAGCTCAGGTGGCCAGTTGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: HGTSAPAHSLSR*SRRAQVASCSF
Trigger: AAAACTGCAACTGGCCACCTGAGCTCGGCGAGACCATCGAGAGAGAGAATGAGCTGGTGCACTGGTGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 72 bp TCCCAGGCCCCTTCTTTAGCAGGCCTTTCTGCCATGTaGGTTCCCCACACCGAATACATGTGTCCAGGTACT +
Preference number: 6 (lower is better)
Translates to: SQAPSLAGLSAM*VPHTEYMCPGT
Trigger: AGTACCTGGACACATGTATTCGGTGTGGGGAACTCACATGGCAGAAAGGCCTGCTAAAGAAGGGGCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 72 bp GCTTCCCAGAGTCCAGAATTGCCTGACAAATTGACTTaGTCTGTGCTGGAGTCAGCACCTCCTGGGCGAGTT +
Preference number: 6 (lower is better)
Translates to: ASQSPELPDKLT*SVLESAPPGRV
Trigger: AACTCGCCCAGGAGGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 72 bp ATACTGCTTCCCAGAGTCCAGAATTGCCTGACAAATTaGCTTGATCTGTGCTGGAGTCAGCACCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ILLPRVQNCLTN*LDLCWSQHLLG
Trigger: GCCCAGGAGGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS CCA 72 bp CTCATTCTCTCTCTCGATGGTCTCGCCGAGCTCAGGTaGCCAGTTGCAGTTTTGTTCCTGTTCCATGAGAAA +
Preference number: 6 (lower is better)
Translates to: LILSLDGLAELR*PVAVLFLFHEK
Trigger: TTTCTCATGGAACAGGAACAAAACTGCAACTGGCCACCTGAGCTCGGCGAGACCATCGAGAGAGAGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS CCA 72 bp CCAGGTACTGCGGTTTCTTGGAAACCAGATAAGCTTTaGCAAACAGATAGGCAATTCCTGGAGCGCCATGGC +
Preference number: 6 (lower is better)
Translates to: PGTAVSWKPDKL*QTDRQFLERHG
Trigger: GCCATGGCGCTCCAGGAATTGCCTATCTGTTTGCCAAAGCTTATCTGGTTTCCAAGAAACCGCAGTACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 72 bp GAGAAAGTCCACGCTCTGCCATACCAATTCCCGATCTaGGGGCTTGAGATGCTCATGGTAAGAAAGAAGCAT +
Preference number: 6 (lower is better)
Translates to: EKVHALPYQFPI*GLEMLMVRKKH
Trigger: ATGCTTCTTTCTTACCATGAGCATCTCAAGCCCTCAGATCGGGAATTGGTATGGCAGAGCGTGGACTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 72 bp TTTATGGCATACTGCTTCCCAGAGTCCAGAATTGCCTaGCAAATTGACTTGATCTGTGCTGGAGTCAGCACC +
Preference number: 6 (lower is better)
Translates to: FMAYCFPESRIA*QIDLICAGVST
Trigger: GGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAGCAGTATGCCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS CCA 72 bp AAGAATACATCAGGGGGAATGGTTTCCTCTTCTTTATaGCATACTGCTTCCCAGAGTCCAGAATTGCCTGAC +
Preference number: 6 (lower is better)
Translates to: KNTSGGMVSSSL*HTASQSPELPD
Trigger: GTCAGGCAATTCTGGACTCTGGGAAGCAGTATGCCATAAAGAAGAGGAAACCATTCCCCCTGATGTATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS CCA 72 bp CACACCGAATACATGTGTCCAGGTACTGCGGTTTCTTaGAAACCAGATAAGCTTTGGCAAACAGATAGGCAA +
Preference number: 6 (lower is better)
Translates to: HTEYMCPGTAVS*KPDKLWQTDRQ
Trigger: TTGCCTATCTGTTTGCCAAAGCTTATCTGGTTTCCAAGAAACCGCAGTACCTGGACACATGTATTCGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378619.4
ENST00000378621.7
ENST00000614025.4
CDS TCA 72 bp CAGCAGATGTTCCATCTTTATCAAGTTTACAGGGAATaGACTTTGAGCTCGGTAGATGTATTTAGAGTTTCC +
Preference number: 6 (lower is better)
Translates to: QQMFHLYQVYRE*TLSSVDVFRVS
Trigger: GGAAACTCTAAATACATCTACCGAGCTCAAAGTTCATTCCCTGTAAACTTGATAAAGATGGAACATCTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378621.7
ENST00000614025.4