RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000050555

Ensembl transcript IDs: ENST00000355452.5, ENST00000361069.9, ENST00000462567.1, ENST00000678544.1, ENST00000678758.1, ENST00000679272.1

Found 1024 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCACGGGAGGGGGCTGGGCCCGCAGAGGTGCCTGACTTCCCAATaGCGAGGCCTTGCCATCTGCTGGAAGAGGGTCTGGGAGAGGGGA +
Preference number: 1 (lower is better)
Translates to: SHGRGLGPQRCLTSQ*RGLAICWKRVWERG
Trigger: TCCCCTCTCCCAGACCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCACCTCTGCGGGCCCAGCCCCCTCCCGTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp CAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTaGAATGGCAGCCAGGCTTGCACACCCTGGTGGCCTCCCGCATGG +
Preference number: 1 (lower is better)
Translates to: QHAGLATGRFPDRTD*NGSQACTPWWPPAW
Trigger: CCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp ACCAACGTCCGGTCCACATGCTGGCCACCTACTAGGTGTGTCATATaGACACCCACAGCCAGGGCCCTGGCTGCCCACCAGCCGGGGAGG +
Preference number: 1 (lower is better)
Translates to: TNVRSTCWPPTRCVI*TPTARALAAHQPGR
Trigger: CCTCCCCGGCTGGTGGGCAGCCAGGGCCCTGGCTGTGGGTGTGCATATGACACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp GAAGCGTCCGGTGAAGGCAATGACACCCCCGCCAGGAATGGGCCTTaGTCTAGCCAGACTAGCAGGCCTGGCCACGGCCTCAGGGTCTCT +
Preference number: 1 (lower is better)
Translates to: EASGEGNDTPARNGP*SSQTSRPGHGLRVS
Trigger: AGAGACCCTGAGGCCGTGGCCAGGCCTGCTAGTCTGGCTAGAGCAAGGCCCATTCCTGGCGGGGGTGTCATTGCCTTCACCGGACGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp TTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACACCCTaGTGGCCTCCCGCATGGCAAGTGGTGCCGCAGGGCTGGTCTGGA +
Preference number: 1 (lower is better)
Translates to: FPDRTDWNGSQACTP*WPPAWQVVPQGWSG
Trigger: TCCAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp GAAGTGGGTACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTaGAGTCCCAGGACCCTGAGAGGGAAGCGTCCGGTGAAGGCAATG +
Preference number: 1 (lower is better)
Translates to: EVGTGQGGPFPQGIW*SPRTLRGKRPVKAM
Trigger: CATTGCCTTCACCGGACGCTTCCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGTACCCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp TGCACACCCTGGTGGCCTCCCGCATGGCAAGTGGTGCCGCAGGGCTaGTCTGGAAAGCGTCAATTAAAGGTCAACTGGGTTGCCGGGGGC +
Preference number: 1 (lower is better)
Translates to: CTPWWPPAWQVVPQG*SGKRQLKVNWVAGG
Trigger: GCCCCCGGCAACCCAGTTGACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp AGAGGAAATGCTGAGGAGTCCTGGGCAGAGGCCAGCATGCGGGCCTaGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCC +
Preference number: 1 (lower is better)
Translates to: RGNAEESWAEASMRA*PQGDSQTGQTGMAA
Trigger: GGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTGCCCAGGACTCCTCAGCATTTCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp GTTCACAGCAGCCGGCTCCGGGGAATGTCTGTATGGGCACACCTGTaGGGTAGTGTGCACCCCCTGGGTCATGTAAACAGCAGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: VHSSRLRGMSVWAHL*GSVHPLGHVNSRWG
Trigger: CCCCCACCTGCTGTTTACATGACCCAGGGGGTGCACACTACCCCACAGGTGTGCCCATACAGACATTCCCCGGAGCCGGCTGCTGTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp ACCCTGGTGGCCTCCCGCATGGCAAGTGGTGCCGCAGGGCTGGTCTaGAAAGCGTCAATTAAAGGTCAACTGGGTTGCCGGGGGCACAGA +
Preference number: 1 (lower is better)
Translates to: TLVASRMASGAAGLV*KASIKGQLGCRGHR
Trigger: TCTGTGCCCCCGGCAACCCAGTTGACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp GACTGGAATGGCAGCCAGGCTTGCACACCCTGGTGGCCTCCCGCATaGCAAGTGGTGCCGCAGGGCTGGTCTGGAAAGCGTCAATTAAAG +
Preference number: 1 (lower is better)
Translates to: DWNGSQACTPWWPPA*QVVPQGWSGKRQLK
Trigger: CTTTAATTGACGCTTTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR TCA 90 bp GGCTGCCCACCAGCCGGGGAGGGTGAGGCACACCACCCTGCCCAGTaGAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: GCPPAGEGEAHHPAQ*KGPLFPRSTELVCA
Trigger: AGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACTGGGCAGGGTGGTGTGCCTCACCCTCCCCGGCTGGTGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp AAGCCCTCTAATGGGAGGTACTGGCCCAGCCACGAGCTCGGCTTTTaGCACCTTCCTACCAACGTCCGGTCCACATGCTGGCCACCTACT +
Preference number: 1 (lower is better)
Translates to: KPSNGRYWPSHELGF*HLPTNVRSTCWPPT
Trigger: AGTAGGTGGCCAGCATGTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACCTCCCATTAGAGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp GAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACATGCTaGCCACCTACTAGGTGTGTCATATGCACACCCACAGCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: ELGFCHLPTNVRSTC*PPTRCVICTPTARA
Trigger: GGCCCTGGCTGTGGGTGTGCATATGACACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp ATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGAGCTGTAGGGAGTaGACGCAGCAACACAGGTCAGGGAGCTGCTGTGAAACAGAGGGC +
Preference number: 1 (lower is better)
Translates to: ISWPVGPLAVSSCRE*TQQHRSGSCCETEG
Trigger: GCCCTCTGTTTCACAGCAGCTCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGACCAACAGGCCAAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp CACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACATaGTGGCCACCTACTAGGTGTGTCATATGCACACCCACAGCCAGG +
Preference number: 1 (lower is better)
Translates to: HELGFCHLPTNVRST*WPPTRCVICTPTAR
Trigger: CCTGGCTGTGGGTGTGCATATGACACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp GTCTCTGGGCCTCAGATTCTGCTGCTAAGAACCCTCCCGGGATCTTaGATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGAGCTGTAGG +
Preference number: 1 (lower is better)
Translates to: VSGPQILLLRTLPGS*ISWPVGPLAVSSCR
Trigger: CCTACAGCTCGACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTTAGCAGCAGAATCTGAGGCCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp ACCTGTGATCACACAACCCCAGCAAAGCCCTCTAATGGGAGGTACTaGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTC +
Preference number: 1 (lower is better)
Translates to: TCDHTTPAKPSNGRY*PSHELGFCHLPTNV
Trigger: GACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACCTCCCATTAGAGGGCTTTGCTGGGGTTGTGTGATCACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp AGTGTGCACTCATGTCCAGGTGAACTGGGTACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCACAGACAGAATCGGCAGGGAGTGACT +
Preference number: 1 (lower is better)
Translates to: SVHSCPGELGTHTQS*WQGRSHRQNRQGVT
Trigger: AGTCACTCCCTGCCGATTCTGTCTGTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp GCTCTGGGACTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTaGAGATCTGCTGAGACCTCCCTGCTATCTGGAGTGAGTGGATGT +
Preference number: 1 (lower is better)
Translates to: ALGLGALAVADPLDL*RSAETSLLSGVSGC
Trigger: ACATCCACTCACTCCAGATAGCAGGGAGGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAGTCCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp GTGCACTCATGTCCAGGTGAACTGGGTACGCACACTCAGTCCTGCTaGCAGGGAAGAAGCCACAGACAGAATCGGCAGGGAGTGACTATC +
Preference number: 1 (lower is better)
Translates to: VHSCPGELGTHTQSC*QGRSHRQNRQGVTI
Trigger: GATAGTCACTCCCTGCCGATTCTGTCTGTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTaGGTACGCACACTCAGTCCTGCTGGCAGGGAAGAAGCCACAGAC +
Preference number: 1 (lower is better)
Translates to: YACAGVRVCTHVQVN*VRTLSPAGREEATD
Trigger: GTCTGTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR TCA 90 bp CACCCCTCCAACTCACCAGCTCCTAGGCTTTACGTGGTAAGTGCCTaGGAGGACAGGGTAGGTACCTGTGATCACACAACCCCAGCAAAG +
Preference number: 1 (lower is better)
Translates to: HPSNSPAPRLYVVSA*EDRVGTCDHTTPAK
Trigger: CTTTGCTGGGGTTGTGTGATCACAGGTACCTACCCTGTCCTCTCAGGCACTTACCACGTAAAGCCTAGGAGCTGGTGAGTTGGAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 90 bp CACGTGTGTATGTTATTGACACTGGGGTGTGCCCGTTTATGCATGTaGAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACG +
Preference number: 1 (lower is better)
Translates to: HVCMLLTLGCARLCM*RGESVHSCPGELGT
Trigger: CGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATAAACGGGCACACCCCAGTGTCAATAACATACACACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp ACATCCAGAGGGTGTCCAGCACACAGGTGGCTCTCACAACAGCTGTaGACTGTAATGTGTGTGGACCGTAAGCTGCTGACTGGATGGATT +
Preference number: 1 (lower is better)
Translates to: TSRGCPAHRWLSQQL*TVMCVDRKLLTGWI
Trigger: AATCCATCCAGTCAGCAGCTTACGGTCCACACACATTACAGTCCACAGCTGTTGTGAGAGCCACCTGTGTGCTGGACACCCTCTGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 90 bp CAGCTGTGGACTGTAATGTGTGTGGACCGTAAGCTGCTGACTGGATaGATTAGACTTGAACACGTGTGGGTCATACACACAGACATGCAC +
Preference number: 1 (lower is better)
Translates to: QLWTVMCVDRKLLTG*IRLEHVWVIHTDMH
Trigger: GTGCATGTCTGTGTGTATGACCCACACGTGTTCAAGTCTAATCCATCCAGTCAGCAGCTTACGGTCCACACACATTACAGTCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACAGCCAGGGCCCTGGCTaGCCACCAGCCGGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHSQGPG*PPAGEG
Trigger: ACCCTCCCCGGCTGGTGGGCAGCCAGGGCCCTGGCT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGGGCAGAGGCCAGCATaGGGGCCTGGCCACAGGGCG +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGGQRPA*GPGHRA
Trigger: CGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTGCCC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGGCCTGTTGGTCCCCTaGCTGTGTCGAGCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSGLLVP*LCRAVG
Trigger: CCCTACAGCTCGACACAGCCAGGGGACCAACAGGCC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCTCCCGCATGGCAAGTaGTGCCGCAGGGCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLLPHGK*CRRAGL
Trigger: CAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCAGGCTTGCACACCCTaGTGGCCTCCCGCATGGCAA +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSQACTP*WPPAWQ
Trigger: TTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CAA 90 bp CACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTaGCACACCCTGGTGGCCTCCCGCATGGCAAGTGGTGCCGCAGGG +
Preference number: 2 (lower is better)
Translates to: HRAIPRQDRLEWQPG*HTLVASRMASGAAG
Trigger: CCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCAGAATCGGCAGGGAGTaGCTATCCACACGGGGGCGA +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSRIGRE*LSTRGR
Trigger: TCGCCCCCGTGTGGATAGTCACTCCCTGCCGATTCT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCAAAGGTCAACTGGGTTaGCGGGGGCACAGAGGCGTG +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSKGQLG*RGHRGV
Trigger: CACGCCTCTGTGCCCCCGGCAACCCAGTTGACCTTT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCCGCATGGCAAGTGGTaGCGCAGGGCTGGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLPHGKW*RRAGLE
Trigger: TTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGAATGGCAGCCAGGCTTaGACACCCTGGTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLNGSQA*TPWWPP
Trigger: GGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTTGGTGGCCTCCCGCATaGCAAGTGGTGCCGCAGGGC +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGWWPPA*QVVPQG
Trigger: GCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCA...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCAGGCTTGCACACCCTaGTGGCCTCCCGCATGGCAA +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLQACTP*WPPAWQ
Trigger: TTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGCCAGCATGCGGGCCTaGCCACAGGGCGATTCCCAG +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGASMRA*PQGDSQ
Trigger: CTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGAGAATCGGCAGGGAGTaGCTATCCACACGGGGGCGA +
Preference number: 2 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGRIGRE*LSTRGR
Trigger: TCGCCCCCGTGTGGATAGTCACTCCCTGCCGATTCT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACAATGGCAGCCAGGCTTaGACACCCTGGTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHNGSQA*TPWWPP
Trigger: GGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTGCCTGACTTCCCAATaGCGAGGCCTTGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSCLTSQ*RGLAIC
Trigger: GCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCTGGGCCCGCAGAGGTaGCTGACTTCCCAATGCCGA +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHLGPQR*LTSQCR
Trigger: TCGGCATTGGGAAGTCAGGCACCTCTGCGGGCCCAG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGGGTACAGGCCAGGGTaGGCCATTCCCTCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHGYRPG*AIPSGH
Trigger: ATGCCCTGAGGGAATGGCCCACCCTGGCCTGTACCC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCTCCCGCATGGCAAGTaGTGCCGCAGGGCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGLPHGK*CRRAGL
Trigger: CAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCTCCCGCATGGCAAGTaGTGCCGCAGGGCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHLPHGK*CRRAGL
Trigger: CAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTACGTGGTAAGTGCCTaGGAGGACAGGGTAGGTACC +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSYVVSA*EDRVGT
Trigger: GGTACCTACCCTGTCCTCTCAGGCACTTACCACGTA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLTHTQS*WQGRSH
Trigger: GTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTCGAGCTGTAGGGAGTaGACGCAGCAACACAGGTCA +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSSSCRE*TQQHRS
Trigger: TGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCCAGGAATGGGCCTTaGTCTAGCCAGACTAGCAGG +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLARNGP*SSQTSR
Trigger: CCTGCTAGTCTGGCTAGAGCAAGGCCCATTCCTGGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCCGCATGGCAAGTGGTaGCGCAGGGCTGGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHPHGKW*RRAGLE
Trigger: TTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCGAGGCCTTGCCATCTaGTGGAAGAGGGTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHRGLAI*WKRVWE
Trigger: CTCCCAGACCCTCTTCCAGCAGATGGCAAGGCCTCG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGTATGGGCACACCTGTaGGGTAGTGTGCACCCCCTG +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHVWAHL*GSVHPL
Trigger: CAGGGGGTGCACACTACCCCACAGGTGTGCCCATAC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCGGGGAATGTCTGTATaGGCACACCTGTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSRGMSV*AHLWGS
Trigger: ACTACCCCACAGGTGTGCCCATACAGACATTCCCCG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGGGTACAGGCCAGGGTaGGCCATTCCCTCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGGYRPG*AIPSGH
Trigger: ATGCCCTGAGGGAATGGCCCACCCTGGCCTGTACCC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGGGAGAGGGGAGGGATaGCAAGAGGAAATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHGRGEG*QEEMLR
Trigger: CCTCAGCATTTCCTCTTGGCATCCCTCCCCTCTCCC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGTATGGGCACACCTGTaGGGTAGTGTGCACCCCCTG +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGVWAHL*GSVHPL
Trigger: CAGGGGGTGCACACTACCCCACAGGTGTGCCCATAC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCATGTCCAGGTGAACTaGGTACGCACACTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSHVQVN*VRTLSP
Trigger: AGGACTGAGTGTGCGTACCCAGTTCACCTGGACATG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCATTTCTTGGCCTGTTaGTCCCCTGGCTGTGTCGAG +
Preference number: 2 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGHFLAC*SPGCVE
Trigger: CTCGACACAGCCAGGGGACCAACAGGCCAAGAAATG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCAATTAAAGGTCAACTaGGTTGCCGGGGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSQLKVN*VAGGTE
Trigger: CTCTGTGCCCCCGGCAACCCAGTTGACCTTTAATTG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGTGGTGCCGCAGGGCTaGTCTGGAAAGCGTCAATTA +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLVVPQG*SGKRQL
Trigger: TAATTGACGCTTTCCAGACCAGCCCTGCGGCACCAC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAATGCTGAGGAGTCCTaGGCAGAGGCCAGCATGCGG +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGNAEES*AEASMR
Trigger: CCGCATGCTGGCCTCTGCCCAGGACTCCTCAGCATT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCACTCATGTCCAGGTaGACTGGGTACGCACACTCA +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHALMSR*TGYAHS
Trigger: TGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTGGACCGTAAGCTGCTaGCTGGATGGATTAGACTTG +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSWTVSC*LDGLDL
Trigger: CAAGTCTAATCCATCCAGTCAGCAGCTTACGGTCCA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCCTGCTATCTGGAGTaGGTGGATGTAGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGPCYLE*VDVAPQ
Trigger: CTGGGGTGCTACATCCACTCACTCCAGATAGCAGGG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCCCTGCTATCTGGAGTaGGTGGATGTAGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHPCYLE*VDVAPQ
Trigger: CTGGGGTGCTACATCCACTCACTCCAGATAGCAGGG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGTHTQS*WQGRSH
Trigger: GTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCAGGGGTGAGAGTGTaGACTCATGTCCAGGTGAAC +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAGVRV*THVQVN
Trigger: GTTCACCTGGACATGAGTGCACACTCTCACCCCTGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTCGAGCTGTAGGGAGTaGACGCAGCAACACAGGTCA +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHSSCRE*TQQHRS
Trigger: TGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGACCCTCCCGGGATCTTaGATTTCTTGGCCTGTTGGT +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLTLPGS*ISWPVG
Trigger: ACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGCCAGGAATGGGCCTTaGTCTAGCCAGACTAGCAGG +
Preference number: 2 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHARNGP*SSQTSR
Trigger: CCTGCTAGTCTGGCTAGAGCAAGGCCCATTCCTGGC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAACGGAATTGGTCTGTaGTGCTGCCCTACCCCTGCC +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGNGIGL*CCPTPA
Trigger: GGCAGGGGTAGGGCAGCAGCACAGACCAATTCCGTT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCATTTCTTGGCCTGTTaGTCCCCTGGCTGTGTCGAG +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHHFLAC*SPGCVE
Trigger: CTCGACACAGCCAGGGGACCAACAGGCCAAGAAATG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGACGTGTGTATGTTATTaGCACTGGGGTGTGCCCGTT +
Preference number: 2 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLTCVCY*HWGVPV
Trigger: AACGGGCACACCCCAGTGTCAATAACATACACACGT...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCCCGCAGAGGTGCCTaGCTTCCCAATGCCGAGGCC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLARRGA*LPNAEA
Trigger: GGCCTCGGCATTGGGAAGTCAGGCACCTCTGCGGGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATACCAGCCGGGGAGGGTaGGGCACACCACCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDTSRGG*GTPPCP
Trigger: TGGGCAGGGTGGTGTGCCTCACCCTCCCCGGCTGGT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGGGTGTGCCCGTTTATaGATGTGCAGGGGTGAGAGT +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGGCARL*MCRGES
Trigger: ACTCTCACCCCTGCACATGCATAAACGGGCACACCC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGGGTGTGCCCGTTTATaGATGTGCAGGGGTGAGAGT +
Preference number: 2 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHGCARL*MCRGES
Trigger: ACTCTCACCCCTGCACATGCATAAACGGGCACACCC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGACCCCCTTGATCTCTaGAGATCTGCTGAGACCTCC +
Preference number: 2 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGDPLDL*RSAETS
Trigger: GGAGGTCTCAGCAGATCTGCAGAGATCAAGGGGGTC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACACCCTCCCGGGATCTTaGATTTCTTGGCCTGTTGGT +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHTLPGS*ISWPVG
Trigger: ACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGGGCAGAGGCCAGCATaGGGGCCTGGCCACAGGGCG +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPGQRPA*GPGHRA
Trigger: CGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTGCCC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCTCTCACAACAGCTGTaGACTGTAATGTGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSLSQQL*TVMCVD
Trigger: GTCCACACACATTACAGTCCACAGCTGTTGTGAGAG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCAATTAAAGGTCAACTaGGTTGCCGGGGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHQLKVN*VAGGTE
Trigger: CTCTGTGCCCCCGGCAACCCAGTTGACCTTTAATTG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCCGCAGGGCTGGTCTaGAAAGCGTCAATTAAAGGT +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAAGLV*KASIKG
Trigger: ACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCACGTTCAACGGAATTaGTCTGTGCTGCTGCCCTAC +
Preference number: 2 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHHVQRN*SVLLPY
Trigger: GTAGGGCAGCAGCACAGACCAATTCCGTTGAACGTG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCCTGGGGTCCTGGAGTaGTGCAAGCTGGCCGAGCCC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDPGVLE*CKLAEP
Trigger: GGGCTCGGCCAGCTTGCATCACTCCAGGACCCCAGG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTACCCTCCCGGGATCTTaGATTTCTTGGCCTGTTGGT +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGTLPGS*ISWPVG
Trigger: ACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTGCTGCCCTACCCCTaGCCCTGTCAGGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLLPYP*PCQGSH
Trigger: GTGGCTCCCCTGACAGGGGCAGGGGTAGGGCAGCAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCAGACTTGAACACGTGTaGGTCATACACACAGACATG +
Preference number: 2 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSRLEHV*VIHTDM
Trigger: CATGTCTGTGTGTATGACCCACACGTGTTCAAGTCT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCTCTCACAACAGCTGTaGACTGTAATGTGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLLSQQL*TVMCVD
Trigger: GTCCACACACATTACAGTCCACAGCTGTTGTGAGAG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAGAATCGGCAGGGAGTaGCTATCCACACGGGGGCGA +
Preference number: 2 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRRIGRE*LSTRGR
Trigger: TCGCCCCCGTGTGGATAGTCACTCCCTGCCGATTCT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGAACCAGAGGTCAGCTaGGGGCCTCTCCGCACCCCA +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDEPEVS*GPLRTP
Trigger: TGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: KNPPGILHFLACWSPGCVTHTQS*WQGRSH
Trigger: GTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAATTGACACTGGGGTGTaGCCGTTTATGCATGTGCAG +
Preference number: 2 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGIDTGV*PFMHVQ
Trigger: CTGCACATGCATAAACGGGCACACCCCAGTGTCAAT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTCATACACACAGACATaGACCCTCACGTGTGTATGT +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLSYTQT*TLTCVC
Trigger: ACATACACACGTGAGGGTGCATGTCTGTGTGTATGA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCATGTAAACAGCAGGTaGGGGAGTGTGTGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: LGALAVADPLDLCRSAETHVNSR*GSVCRG
Trigger: TCCCCGGCACACACTCCCCCACCTGCTGTTTACATG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGAGACTTGAACACGTGTaGGTCATACACACAGACATG +
Preference number: 2 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGRLEHV*VIHTDM
Trigger: CATGTCTGTGTGTATGACCCACACGTGTTCAAGTCT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGAAGCTGCTGACTGGATaGATTAGACTTGAACACGTG +
Preference number: 2 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLKLLTG*IRLEHV
Trigger: CACGTGTTCAAGTCTAATCCATCCAGTCAGCAGCTT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTGGTGGCCTCCCGCATaGCAAGTGGTGCCGCAGGGC +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPWWPPA*QVVPQG
Trigger: GCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATACACCATCCCCCTCCTaGATGGCGCCCCTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDTPSPS*MAPLPA
Trigger: AGCAGGGAGGGGCGCCATCCAGGAGGGGGATGGTGT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCCAAGAGCCCTGACTaGGCAGCTCCAACATCCCAC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLAKSPD*AAPTSH
Trigger: GTGGGATGTTGGAGCTGCTCAGTCAGGGCTCTTGGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTCTAATGGGAGGTACTaGCCCAGCCACGAGCTCGGC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLSNGRY*PSHELG
Trigger: GCCGAGCTCGTGGCTGGGCCAGTACCTCCCATTAGA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCCAAGAGGAAATGCTaGGGAGTCCTGGGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDAKRKC*GVLGRG
Trigger: GCCTCTGCCCAGGACTCCTCAGCATTTCCTCTTGGC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGAGTTCGTCTCGAGCCTaGACCAGAGGTCAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLSSSRA*TRGQLR
Trigger: CCTCAGCTGACCTCTGGTTCAGGCTCGAGACGAACT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCACAGGTCAGGGAGCTaGTGTGAAACAGAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLHRSGS*CETEGS
Trigger: GCTGCCCTCTGTTTCACAGCAGCTCCCTGACCTGTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCCGCATGGCAAGTGGTaGCGCAGGGCTGGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPPHGKW*RRAGLE
Trigger: TTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCCAATGCCGAGGCCTTaGCATCTGCTGGAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLPMPRP*HLLEEG
Trigger: ACCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCATGTAAACAGCAGGTaGGGGAGTGTGTGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLHVNSR*GSVCRG
Trigger: TCCCCGGCACACACTCCCCCACCTGCTGTTTACATG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAAAGCTGCTGACTGGATaGATTAGACTTGAACACGTG +
Preference number: 2 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGKLLTG*IRLEHV
Trigger: CACGTGTTCAAGTCTAATCCATCCAGTCAGCAGCTT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAAGCTGCTGACTGGATaGATTAGACTTGAACACGTG +
Preference number: 2 (lower is better)
Translates to: GTGPATSSAFATFLPTSGKLLTG*IRLEHV
Trigger: CACGTGTTCAAGTCTAATCCATCCAGTCAGCAGCTT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGTCCGGTCCACATGCTaGCCACCTACTAGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLVRSTC*PPTRCV
Trigger: GACACACCTAGTAGGTGGCCAGCATGTGGACCGGAC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCATGTGCAGGGGTaGGAGTGTGCACTCATGTCC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLMHVQG*ECALMS
Trigger: GGACATGAGTGCACACTCTCACCCCTGCACATGCAT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCACGTGTGTATGTTATTaGCACTGGGGTGTGCCCGTT +
Preference number: 2 (lower is better)
Translates to: LGALAVADPLDLCRSAETTCVCY*HWGVPV
Trigger: AACGGGCACACCCCAGTGTCAATAACATACACACGT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATAGTTCGTCTCGAGCCTaGACCAGAGGTCAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDSSSRA*TRGQLR
Trigger: CCTCAGCTGACCTCTGGTTCAGGCTCGAGACGAACT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGGGTGTGCCCGTTTATaGATGTGCAGGGGTGAGAGT +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLGCARL*MCRGES
Trigger: ACTCTCACCCCTGCACATGCATAAACGGGCACACCC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGAACGTCCGGTCCACATaGTGGCCACCTACTAGGTGT +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLNVRST*WPPTRC
Trigger: ACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCATGTAAACAGCAGGTaGGGGAGTGTGTGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDHVNSR*GSVCRG
Trigger: TCCCCGGCACACACTCCCCCACCTGCTGTTTACATG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCGGGGAATGTCTGTATaGGCACACCTGTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLRGMSV*AHLWGS
Trigger: ACTACCCCACAGGTGTGCCCATACAGACATTCCCCG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGATCACAGGCTGAAGTaGGTACAGGCCAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPDHRLK*VQARVG
Trigger: GCCCACCCTGGCCTGTACCCACTTCAGCCTGTGATC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGTGGTGCCGCAGGGCTaGTCTGGAAAGCGTCAATTA +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLVVPQG*SGKRQL
Trigger: TAATTGACGCTTTCCAGACCAGCCCTGCGGCACCAC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCAATGCTGAGGAGTCCTaGGCAGAGGCCAGCATGCGG +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPNAEES*AEASMR
Trigger: CCGCATGCTGGCCTCTGCCCAGGACTCCTCAGCATT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGGCCTTGCCATCTGCTaGAAGAGGGTCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPGLAIC*KRVWER
Trigger: CCTCTCCCAGACCCTCTTCCAGCAGATGGCAAGGCC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCACTCATGTCCAGGTaGACTGGGTACGCACACTCA +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDALMSR*TGYAHS
Trigger: TGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCACCACCCTGCCCAGTaGAAGGGTCCTTTATTTCCA +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLHHPAQ*KGPLFP
Trigger: TGGAAATAAAGGACCCTTTCACTGGGCAGGGTGGTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCAGGGGTGAGAGTGTaGACTCATGTCCAGGTGAAC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDAGVRV*THVQVN
Trigger: GTTCACCTGGACATGAGTGCACACTCTCACCCCTGC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCCCGTTTATGCATGTaGAGGGGTGAGAGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDARLCM*RGESVH
Trigger: GTGCACACTCTCACCCCTGCACATGCATAAACGGGC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAAATGGCAGCCAGGCTTaGACACCCTGGTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRNGSQA*TPWWPP
Trigger: GGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCACGTTCAACGGAATTaGTCTGTGCTGCTGCCCTAC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLHVQRN*SVLLPY
Trigger: GTAGGGCAGCAGCACAGACCAATTCCGTTGAACGTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATAGGTGGAGGATGCAGTaGGCAGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDRWRMQ*AEIMPL
Trigger: CAGTGGCATGATCTCTGCCCACTGCATCCTCCACCT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CAA 90 bp ACTTCACCTAAGCTGAGAAGCTGGAATCAGGACAGAGTCACCAGCTaGTCTCTTGCAAGCACTGGACCTGATGACATGTACACCTGGGGC +
Preference number: 2 (lower is better)
Translates to: TSPKLRSWNQDRVTS*SLASTGPDDMYTWG
Trigger: GCCCCAGGTGTACATGTCATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTCTCAGCTTAGGTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTGGACCGTAAGCTGCTaGCTGGATGGATTAGACTTG +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLWTVSC*LDGLDL
Trigger: CAAGTCTAATCCATCCAGTCAGCAGCTTACGGTCCA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCACCACCCTGCCCAGTaGAAGGGTCCTTTATTTCCA +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDHHPAQ*KGPLFP
Trigger: TGGAAATAAAGGACCCTTTCACTGGGCAGGGTGGTG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCCCGTTTATGCATGTaGAGGGGTGAGAGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPARLCM*RGESVH
Trigger: GTGCACACTCTCACCCCTGCACATGCATAAACGGGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGACCCCCTTGATCTCTaGAGATCTGCTGAGACCTCC +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPDPLDL*RSAETS
Trigger: GGAGGTCTCAGCAGATCTGCAGAGATCAAGGGGGTC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCGGGGAATGTCTGTATaGGCACACCTGTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPRGMSV*AHLWGS
Trigger: ACTACCCCACAGGTGTGCCCATACAGACATTCCCCG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCAGACTTGAACACGTGTaGGTCATACACACAGACATG +
Preference number: 2 (lower is better)
Translates to: LGALAVADPLDLCRSAETRLEHV*VIHTDM
Trigger: CATGTCTGTGTGTATGACCCACACGTGTTCAAGTCT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCATTTCTTGGCCTGTTaGTCCCCTGGCTGTGTCGAG +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPHFLAC*SPGCVE
Trigger: CTCGACACAGCCAGGGGACCAACAGGCCAAGAAATG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAAATGCTGAGGAGTCCTaGGCAGAGGCCAGCATGCGG +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRNAEES*AEASMR
Trigger: CCGCATGCTGGCCTCTGCCCAGGACTCCTCAGCATT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGGCCTTGCCATCTGCTaGAAGAGGGTCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRGLAIC*KRVWER
Trigger: CCTCTCCCAGACCCTCTTCCAGCAGATGGCAAGGCC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACCCTGCTATCTGGAGTaGGTGGATGTAGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRPCYLE*VDVAPQ
Trigger: CTGGGGTGCTACATCCACTCACTCCAGATAGCAGGG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATATTGACACTGGGGTGTaGCCGTTTATGCATGTGCAG +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDIDTGV*PFMHVQ
Trigger: CTGCACATGCATAAACGGGCACACCCCAGTGTCAAT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACCAATGCCGAGGCCTTaGCATCTGCTGGAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRPMPRP*HLLEEG
Trigger: ACCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATGCCTGACTTCCCAATaGCGAGGCCTTGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRCLTSQ*RGLAIC
Trigger: GCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTGTTGTCCACCCTCTTaGCTGGAATGCTTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDCCPPS*LECFLL
Trigger: GAGAAGGAAGCATTCCAGGCAAGAGGGTGGACAACA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAAGTGGGCAGAGATCATaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRSGQRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATCTCTGCCCACT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATTCAACCTGGGGTCCTaGAGTGATGCAAGCTGGCCG +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRFNLGS*SDASWP
Trigger: CGGCCAGCTTGCATCACTCCAGGACCCCAGGTTGAA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAATGCATGTGCAGGGGTaGGAGTGTGCACTCATGTCC +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRMHVQG*ECALMS
Trigger: GGACATGAGTGCACACTCTCACCCCTGCACATGCAT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR TCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATACGTGGTAAGTGCCTaGGAGGACAGGGTAGGTACC +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRYVVSA*EDRVGT
Trigger: GGTACCTACCCTGTCCTCTCAGGCACTTACCACGTA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCATTGACACTGGGGTGTaGCCGTTTATGCATGTGCAG +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPIDTGV*PFMHVQ
Trigger: CTGCACATGCATAAACGGGCACACCCCAGTGTCAAT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTCTCACAACAGCTGTaGACTGTAATGTGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLSQQL*TVMCVD
Trigger: GTCCACACACATTACAGTCCACAGCTGTTGTGAGAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATGTCCAGCACACAGGTaGCTCTCACAACAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRCPAHR*LSQQLW
Trigger: CCACAGCTGTTGTGAGAGCCACCTGTGTGCTGGACA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACCACCCCATTCAACCTaGGGTCCTGGAGTGATGCAA +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRPPHST*GPGVMQ
Trigger: TTGCATCACTCCAGGACCCCAGGTTGAATGGGGTGG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACTTAAACCTGGGAGGTaGAGGATGCAGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRLKPGR*RMQWAE
Trigger: CTCTGCCCACTGCATCCTCCACCTCCCAGGTTTAAG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTCTCATGTAACAACTTaGCCAACATCCAGAGGGTGT +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDSHVTT*PTSRGC
Trigger: ACACCCTCTGGATGTTGGGCAAGTTGTTACATGAGA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCAAAGAAAGCCACTCTaGAAAGAGAAAAGAATGGGC +
Preference number: 2 (lower is better)
Translates to: EAGIRTESPACLLQALDLQRKPL*KEKRMG
Trigger: GCCCATTCTTTTCTCTTTGCAGAGTGGCTTTCTTTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACATGTCCAGGTGAACTaGGTACGCACACTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRHVQVN*VRTLSP
Trigger: AGGACTGAGTGTGCGTACCCAGTTCACCTGGACATG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGCCGCAGGGCTGGTCTaGAAAGCGTCAATTAAAGGT +
Preference number: 2 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRAAGLV*KASIKG
Trigger: ACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTCTCATGTAACAACTTaGCCAACATCCAGAGGGTGT +
Preference number: 2 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPSHVTT*PTSRGC
Trigger: ACACCCTCTGGATGTTGGGCAAGTTGTTACATGAGA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCAAAGAAAGCCACTCTaGAAAGAGAAAAGAATGGGC +
Preference number: 2 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDQRKPL*KEKRMG
Trigger: GCCCATTCTTTTCTCTTTGCAGAGTGGCTTTCTTTG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR TCA 72 bp GGAGCCACGGGAGGGGGCTGGGCCCGCAGAGGTGCCTaGCTTCCCAATGCCGAGGCCTTGCCATCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: GATGGGWARRGA*LPNAEALPSAG
Trigger: TCCAGCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCACCTCTGCGGGCCCAGCCCCCTCCCGTGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp GGCAGCCAGGCTTGCACACCCTGGTGGCCTCCCGCATaGCAAGTGGTGCCGCAGGGCTGGTCTGGAAAGCGT +
Preference number: 3 (lower is better)
Translates to: GSQACTPWWPPA*QVVPQGWSGKR
Trigger: ACGCTTTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp AGGGGGCTGGGCCCGCAGAGGTGCCTGACTTCCCAATaGCGAGGCCTTGCCATCTGCTGGAAGAGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: RGLGPQRCLTSQ*RGLAICWKRVW
Trigger: CCAGACCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCACCTCTGCGGGCCCAGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp ACAGACTGGAATGGCAGCCAGGCTTGCACACCCTGGTaGCCTCCCGCATGGCAAGTGGTGCCGCAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: TDWNGSQACTPW*PPAWQVVPQGW
Trigger: CCAGCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp AGGACAGACTGGAATGGCAGCCAGGCTTGCACACCCTaGTGGCCTCCCGCATGGCAAGTGGTGCCGCAGGGC +
Preference number: 3 (lower is better)
Translates to: RTDWNGSQACTP*WPPAWQVVPQG
Trigger: GCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTCTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp GGTGAAGGCAATGACACCCCCGCCAGGAATGGGCCTTaGTCTAGCCAGACTAGCAGGCCTGGCCACGGCCTC +
Preference number: 3 (lower is better)
Translates to: GEGNDTPARNGP*SSQTSRPGHGL
Trigger: GAGGCCGTGGCCAGGCCTGCTAGTCTGGCTAGAGCAAGGCCCATTCCTGGCGGGGGTGTCATTGCCTTCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp GGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTaGAATGGCAGCCAGGCTTGCACACCCTGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: GLATGRFPDRTD*NGSQACTPWWP
Trigger: AGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCTGGGACTAGGGGCTTaGGCTGTTGCTGACCCCCTT +
Preference number: 3 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLLGLGA*AVADPL
Trigger: AAGGGGGTCAGCAACAGCCAAAGCCCCTAGTCCCAG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCCACGAGCTCGGCTTTaGCCACCTTCCTACCAACGT +
Preference number: 3 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSPRARL*PPSYQR
Trigger: ACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGGGATCTTGCATTTCTaGGCCTGTTGGTCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLGILHF*ACWSPG
Trigger: GCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGGGATCTTGCATTTCTaGGCCTGTTGGTCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGGILHF*ACWSPG
Trigger: GCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACTGGGACTAGGGGCTTaGGCTGTTGCTGACCCCCTT +
Preference number: 3 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGLGLGA*AVADPL
Trigger: AAGGGGGTCAGCAACAGCCAAAGCCCCTAGTCCCAG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGAACCCTCCCGGGATCTaGCATTTCTTGGCCTGTTGG +
Preference number: 3 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLNPPGI*HFLACW
Trigger: CCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCACGTGTGTATGTTATaGACACTGGGGTGTGCCCGT +
Preference number: 3 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGHVCML*TLGCAR
Trigger: ACGGGCACACCCCAGTGTCAATAACATACACACGTG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCTGTTGCTGACCCCCTaGATCTCTGCAGATCTGCTG +
Preference number: 3 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHLLLTP*ISADLL
Trigger: CAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCCACGTTCAACGGAATaGGTCTGTGCTGCTGCCCTA +
Preference number: 3 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHPRSTE*VCAAAL
Trigger: TAGGGCAGCAGCACAGACCAATTCCGTTGAACGTGG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp CCTGTTGGTCCCCTGGCTGTGTCGAGCTGTAGGGAGTaGACGCAGCAACACAGGTCAGGGAGCTGCTGTGAA +
Preference number: 3 (lower is better)
Translates to: PVGPLAVSSCRE*TQQHRSGSCCE
Trigger: TTCACAGCAGCTCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGACCAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp AATGGGAGGTACTGGCCCAGCCACGAGCTCGGCTTTTaGCACCTTCCTACCAACGTCCGGTCCACATGCTGG +
Preference number: 3 (lower is better)
Translates to: NGRYWPSHELGF*HLPTNVRSTCW
Trigger: CCAGCATGTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACCTCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp AGCCGGCTCCGGGGAATGTCTGTATGGGCACACCTGTaGGGTAGTGTGCACCCCCTGGGTCATGTAAACAGC +
Preference number: 3 (lower is better)
Translates to: SRLRGMSVWAHL*GSVHPLGHVNS
Trigger: GCTGTTTACATGACCCAGGGGGTGCACACTACCCCACAGGTGTGCCCATACAGACATTCCCCGGAGCCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp GCCTCCCGCATGGCAAGTGGTGCCGCAGGGCTGGTCTaGAAAGCGTCAATTAAAGGTCAACTGGGTTGCCGG +
Preference number: 3 (lower is better)
Translates to: ASRMASGAAGLV*KASIKGQLGCR
Trigger: CCGGCAACCCAGTTGACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGTTCAACGGAATaGGTCTGTGCTGCTGCCCTA +
Preference number: 3 (lower is better)
Translates to: GTGPATSSAFATFLPTSGPRSTE*VCAAAL
Trigger: TAGGGCAGCAGCACAGACCAATTCCGTTGAACGTGG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp TCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTaGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAAC +
Preference number: 3 (lower is better)
Translates to: SRDLAFLGLLVP*LCRAVGSARSN
Trigger: GTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp CACACAACCCCAGCAAAGCCCTCTAATGGGAGGTACTaGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCT +
Preference number: 3 (lower is better)
Translates to: HTTPAKPSNGRY*PSHELGFCHLP
Trigger: AGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACCTCCCATTAGAGGGCTTTGCTGGGGTTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCTGGATGGATTAGACTaGAACACGTGTGGGTCATAC +
Preference number: 3 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLLDGLD*NTCGSY
Trigger: GTATGACCCACACGTGTTCAAGTCTAATCCATCCAG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGATCTCATGTAACAACTaGCCCAACATCCAGAGGGTG +
Preference number: 3 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGISCNN*PNIQRV
Trigger: CACCCTCTGGATGTTGGGCAAGTTGTTACATGAGAT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCTGGGACTAGGGGCTTaGGCTGTTGCTGACCCCCTT +
Preference number: 3 (lower is better)
Translates to: KNPPGILHFLACWSPGCVLGLGA*AVADPL
Trigger: AAGGGGGTCAGCAACAGCCAAAGCCCCTAGTCCCAG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCTGGATGGATTAGACTaGAACACGTGTGGGTCATAC +
Preference number: 3 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHLDGLD*NTCGSY
Trigger: GTATGACCCACACGTGTTCAAGTCTAATCCATCCAG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACATCTCATGTAACAACTaGCCCAACATCCAGAGGGTG +
Preference number: 3 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHISCNN*PNIQRV
Trigger: CACCCTCTGGATGTTGGGCAAGTTGTTACATGAGAT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCCCAATGCCGAGGCCTaGCCATCTGCTGGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: EAGIRTESPACLLQALDLPNAEA*PSAGRG
Trigger: CCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGGG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCACCTCAGGAGGGGTTaGAGGCCTGCGGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDHLRRG*RPAAKS
Trigger: GCTCTTGGCCGCAGGCCTCAAACCCCTCCTGAGGTG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR TCA 72 bp CCAGCCGGGGAGGGTGAGGCACACCACCCTGCCCAGTaGAAGGGTCCTTTATTTCCACGTTCAACGGAATTG +
Preference number: 3 (lower is better)
Translates to: PAGEGEAHHPAQ*KGPLFPRSTEL
Trigger: CAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACTGGGCAGGGTGGTGTGCCTCACCCTCCCCGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp TGTCCAGGTGAACTGGGTACGCACACTCAGTCCTGCTaGCAGGGAAGAAGCCACAGACAGAATCGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: CPGELGTHTQSC*QGRSHRQNRQG
Trigger: TCCCTGCCGATTCTGTCTGTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGTACCCAGTTCACCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp GCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTaGGTACGCACACTCAGTCCTGCTGGCAGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: AGVRVCTHVQVN*VRTLSPAGREE
Trigger: TTCTTCCCTGCCAGCAGGACTGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp TGGTGGCCTCCCGCATGGCAAGTGGTGCCGCAGGGCTaGTCTGGAAAGCGTCAATTAAAGGTCAACTGGGTT +
Preference number: 3 (lower is better)
Translates to: WWPPAWQVVPQG*SGKRQLKVNWV
Trigger: AACCCAGTTGACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTATCTCATGTAACAACTaGCCCAACATCCAGAGGGTG +
Preference number: 3 (lower is better)
Translates to: GTGPATSSAFATFLPTSGISCNN*PNIQRV
Trigger: CACCCTCTGGATGTTGGGCAAGTTGTTACATGAGAT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCTGTTGCTGACCCCCTaGATCTCTGCAGATCTGCTG +
Preference number: 3 (lower is better)
Translates to: KNPPGILHFLACWSPGCVLLLTP*ISADLL
Trigger: CAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp TCATGTCCAGGTGAACTGGGTACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCACAGACAGAATCGGCAG +
Preference number: 3 (lower is better)
Translates to: SCPGELGTHTQS*WQGRSHRQNRQ
Trigger: CTGCCGATTCTGTCTGTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGTACCCAGTTCACCTGGACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTaGAGATCTGCTGAGACCTCCCTGCTATCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: LGALAVADPLDL*RSAETSLLSGV
Trigger: CACTCCAGATAGCAGGGAGGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp CCTCAGATTCTGCTGCTAAGAACCCTCCCGGGATCTTaGATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCG +
Preference number: 3 (lower is better)
Translates to: PQILLLRTLPGS*ISWPVGPLAVS
Trigger: CGACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTTAGCAGCAGAATCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp GGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACATaGTGGCCACCTACTAGGTGTGTCATATGCACACCC +
Preference number: 3 (lower is better)
Translates to: GFCHLPTNVRST*WPPTRCVICTP
Trigger: GGGTGTGCATATGACACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCATTTCTTGGCCTGTaGGTCCCCTGGCTGTGTCGA +
Preference number: 3 (lower is better)
Translates to: EAGIRTESPACLLQALDLAFLGL*VPWLCR
Trigger: TCGACACAGCCAGGGGACCAACAGGCCAAGAAATGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp GGGTGTCCAGCACACAGGTGGCTCTCACAACAGCTGTaGACTGTAATGTGTGTGGACCGTAAGCTGCTGACT +
Preference number: 3 (lower is better)
Translates to: GCPAHRWLSQQL*TVMCVDRKLLT
Trigger: AGTCAGCAGCTTACGGTCCACACACATTACAGTCCACAGCTGTTGTGAGAGCCACCTGTGTGCTGGACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR TCA 72 bp TCTGCAGATCTGCTGAGACCTCCCTGCTATCTGGAGTaGGTGGATGTAGCACCCCAGGGCATCTCATGTAAC +
Preference number: 3 (lower is better)
Translates to: SADLLRPPCYLE*VDVAPQGISCN
Trigger: GTTACATGAGATGCCCTGGGGTGCTACATCCACTCACTCCAGATAGCAGGGAGGTCTCAGCAGATCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp ACTTGCCCAACATCCAGAGGGTGTCCAGCACACAGGTaGCTCTCACAACAGCTGTGGACTGTAATGTGTGTG +
Preference number: 3 (lower is better)
Translates to: TCPTSRGCPAHR*LSQQLWTVMCV
Trigger: CACACACATTACAGTCCACAGCTGTTGTGAGAGCCACCTGTGTGCTGGACACCCTCTGGATGTTGGGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp TTTTGCCACCTTCCTACCAACGTCCGGTCCACATGCTaGCCACCTACTAGGTGTGTCATATGCACACCCACA +
Preference number: 3 (lower is better)
Translates to: FCHLPTNVRSTC*PPTRCVICTPT
Trigger: TGTGGGTGTGCATATGACACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTTGGTAGGAAGGTGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCACGTGTGTATGTTATaGACACTGGGGTGTGCCCGT +
Preference number: 3 (lower is better)
Translates to: EAGIRTESPACLLQALDLHVCML*TLGCAR
Trigger: ACGGGCACACCCCAGTGTCAATAACATACACACGTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCATTTCTTGGCCTGTaGGTCCCCTGGCTGTGTCGA +
Preference number: 3 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPAFLGL*VPWLCR
Trigger: TCGACACAGCCAGGGGACCAACAGGCCAAGAAATGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp ATGTTATTGACACTGGGGTGTGCCCGTTTATGCATGTaGAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAA +
Preference number: 3 (lower is better)
Translates to: MLLTLGCARLCM*RGESVHSCPGE
Trigger: TTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATAAACGGGCACACCCCAGTGTCAATAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR GCA 72 bp GTGTGTATGTTATTGACACTGGGGTGTGCCCGTTTATaGATGTGCAGGGGTGAGAGTGTGCACTCATGTCCA +
Preference number: 3 (lower is better)
Translates to: VCMLLTLGCARL*MCRGESVHSCP
Trigger: TGGACATGAGTGCACACTCTCACCCCTGCACATGCATAAACGGGCACACCCCAGTGTCAATAACATACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTGGATGGATTAGACTaGAACACGTGTGGGTCATAC +
Preference number: 3 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLDGLD*NTCGSY
Trigger: GTATGACCCACACGTGTTCAAGTCTAATCCATCCAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAAACCCTCCCGGGATCTaGCATTTCTTGGCCTGTTGG +
Preference number: 3 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRNPPGI*HFLACW
Trigger: CCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CCA 72 bp ACTGTAATGTGTGTGGACCGTAAGCTGCTGACTGGATaGATTAGACTTGAACACGTGTGGGTCATACACACA +
Preference number: 3 (lower is better)
Translates to: TVMCVDRKLLTG*IRLEHVWVIHT
Trigger: TGTGTGTATGACCCACACGTGTTCAAGTCTAATCCATCCAGTCAGCAGCTTACGGTCCACACACATTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGGGCAGAGGCCAGCATaGGGGCCTGGCCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGGQRPA*GPGHRA
Trigger: CGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTGCCC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCCCGCGGCGCCCACGTaGGGACAGAAGTCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLPAAPT*GQKSSG
Trigger: GCCCGAGGACTTCTGTCCCCACGTGGGCGCCGCGGG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCGTTGTGGTGGCGCTaGGGGTCGGCGGCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLALWWR*GSAASQ
Trigger: CTGCGACGCCGCCGACCCCCAGCGCCACCACAACGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCCTGGGGTCCTGGAGTaGTGCAAGCTGGCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSPGVLE*CKLAEP
Trigger: GGGCTCGGCCAGCTTGCATCACTCCAGGACCCCAGG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGCCCGCAGAGGTGCCTaGCTTCCCAATGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGARRGA*LPNAEA
Trigger: GGCCTCGGCATTGGGAAGTCAGGCACCTCTGCGGGC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCCTGGGGTCCTGGAGTaGTGCAAGCTGGCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGPGVLE*CKLAEP
Trigger: GGGCTCGGCCAGCTTGCATCACTCCAGGACCCCAGG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACAGTCCTCGGGCGGGCTaGCGCACGTGTGCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHSPRAG*RTCARP
Trigger: AGGCCTCGCACACGTGCGGCAGCCCGCCCGAGGACT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCAGGCCAACTGGCCTaGCACGTCGGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAGQLA*HVGAAL
Trigger: GAGTGCGGCCCCGACGTGGCAGGCCAGTTGGCCTGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCCCGCCGTGGCCTGTaGTGCGGAAGAGCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLARRGL*CGRAPD
Trigger: ATCGGGAGCTCTTCCGCAGCACAGGCCACGGCGGGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCCAGTGGGTGACACTTaGAGCTCCGGCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSPVGDT*SSGSPS
Trigger: GGAGGGGCTGCCGGAGCTGCAAGTGTCACCCACTGG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCCCGGGGAGCCCAGCTaGAGCCTCAGGCGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSPGEPS*SLRRSS
Trigger: ACTAGAACGCCTGAGGCTGCAGCTGGGCTCCCCGGG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAAGCCAGGGCCCTGGCTaGCCACCAGCCGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGSQGPG*PPAGEG
Trigger: ACCCTCCCCGGCTGGTGGGCAGCCAGGGCCCTGGCT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCGCAGCCGCCGCCATaGTCAAGGGCACCGACGCCG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGAQPPP*SRAPTP
Trigger: CGGCGTCGGTGCCCTTGACCATGGCGGCGGCTGCGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCCGCTACACTGGCACTaGTGGCAGGGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGPLHWH*WQGWGC
Trigger: GCACCCCCAGCCCTGCCACCAGTGCCAGTGTAGCGG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACGAGGCAGCGCCCAGTaGGGAGCACCTGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGRGSAQ*GAPAGP
Trigger: CGGGCCTGCAGGTGCTCCCCACTGGGCGCTGCCTCG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCATGTGCCGTTCTCGTaGCACTGGGCCGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSHVPFS*HWAEAA
Trigger: CGCTGCCTCGGCCCAGTGCCACGAGAACGGCACATG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCGCGTAGCTGGTGTTaGAGGCGAGCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLARSWC*RRAGPS
Trigger: GGAGGGCCCTGCTCGCCTCCAACACCAGCTACGCGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGACGCCAGCACCTGCTaGGACGCCTGTTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSDASTC*DACWSV
Trigger: CACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCTCCCGCATGGCAAGTaGTGCCGCAGGGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSLPHGK*CRRAGL
Trigger: CAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGCCAGCATGCGGGCCTaGCCACAGGGCGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLASMRA*PQGDSQ
Trigger: CTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTGCAGCCTCCCTCACTaGGCGAGTGGAACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLCSLPH*ASGTRA
Trigger: TGCCCGGGTTCCACTCGCTCAGTGAGGGAGGCTGCA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCTCCCGGGCGGCCTTaGCAGCACCCTCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGAPGRP*QHPRGS
Trigger: TGAGCCTCGAGGGTGCTGTCAAGGCCGCCCGGGAGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCTTGCGTCTGGCTGGTaGGCCTGCTGGCACGGCGGT +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHLASGW*ACWHGG
Trigger: ACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGAACCAGAGGTCAGCTaGGGGCCTCTCCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGEPEVS*GPLRTP
Trigger: TGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGACCTCAGGAGGGGTTTaGGGCCTGCGGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLTSGGV*GLRPRA
Trigger: GGCTCTTGGCCGCAGGCCTCAAACCCCTCCTGAGGT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTGCCTTCCTCTGCAATaGCGCCTGGTCCTTGGGCCG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSCLPLQ*RLVLGP
Trigger: CGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGTCCAGCCAGTCACCGTaGGCTTGCAGGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGSSQSP*ACRRRC
Trigger: GCACCTGCGCCTGCAAGCCCACGGTGACTGGCTGGA...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGGGCAGGGACAGGGCTaGCAGTCGTCGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHGQGQG*QSSAWP
Trigger: GGGCCAAGCCGACGACTGCCAGCCCTGTCCCTGCCC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGAGGCAGCGCAGGCAGTaGCCAGACAGGGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGRQRRQ*PDRGSQ
Trigger: CTGTGACCCCCTGTCTGGCCACTGCCTGCGCTGCCT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCACCTGTCACAGGCCTaGCCTGTGACACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGHLSQA*PVTPGR
Trigger: CCGCCCAGGTGTCACAGGCCAGGCCTGTGACAGGTG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGTTCTGGGATCCGGCCTaGGCACAGCGGGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLFWDPA*AQRAPL
Trigger: CAAGGGTGCCCGCTGTGCCCAGGCCGGATCCCAGAA...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGTGTCTCTGTGGCTCCTaGCGAGGGCACGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGCLCGS*RGHGPL
Trigger: CAGAGGCCCGTGCCCTCGCCAGGAGCCACAGAGACA...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTGCCGTAGCGTCGCCTaGGCAGCAGTCTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSCRSVA*AAVWRV
Trigger: AACCCTCCAGACTGCTGCCCAGGCGACGCTACGGCA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGACGCCAGCACCTGCTaGGACGCCTGTTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLDASTC*DACWSV
Trigger: CACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTGGTGGCCTCCCGCATaGCAAGTGGTGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHWWPPA*QVVPQG
Trigger: GCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCGCAGCCTGGACAGATaGGGAAGCCTGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHRSLDR*GSLGQG
Trigger: GCCCTGACCCAGGCTTCCTCATCTGTCCAGGCTGCG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCTTGCGTCTGGCTGGTaGGCCTGCTGGCACGGCGGT +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGLASGW*ACWHGG
Trigger: ACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGCCCGCAGAGGTGCCTaGCTTCCCAATGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGARRGA*LPNAEA
Trigger: GGCCTCGGCATTGGGAAGTCAGGCACCTCTGCGGGC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACACCTCAGGAGGGGTTTaGGGCCTGCGGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHTSGGV*GLRPRA
Trigger: GGCTCTTGGCCGCAGGCCTCAAACCCCTCCTGAGGT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGGGTCGCAGGGCATCTaGTCACTGACCGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGGSQGI*SLTEPC
Trigger: ACAGGGCTCGGTCAGTGAGCAGATGCCCTGCGACCC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCTGGGCAGCCCTCACTaGCAGCTGGCACAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLLGSPH*QLAQFS
Trigger: CGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCCGCATGGCAAGTGGTaGCGCAGGGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLPHGKW*RRAGLE
Trigger: TTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGAATGGCAGCCAGGCTTaGACACCCTGGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGNGSQA*TPWWPP
Trigger: GGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCGAGGCCTTGCCATCTaGTGGAAGAGGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSRGLAI*WKRVWE
Trigger: CTCCCAGACCCTCTTCCAGCAGATGGCAAGGCCTCG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACTGCTGCCCTACCCCTaGCCCTGTCAGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGLLPYP*PCQGSH
Trigger: GTGGCTCCCCTGACAGGGGCAGGGGTAGGGCAGCAG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCGGGGCCGCACTCGCTaGCATGCCCGTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHRGRTR*HARCTC
Trigger: GCAAGTGCAACGGGCATGCCAGCGAGTGCGGCCCCG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCCTGGAACTGGGCAGTaGACGCGCACACCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSPGTGQ*TRTPWS
Trigger: ACTCCAAGGTGTGCGCGTCCACTGCCCAGTTCCAGG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGTGGCAGTCGTCGGCTTaGCCCGCGAAAGGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGWQSSA*PAKGLP
Trigger: TGGCAACCCTTTCGCGGGCCAAGCCGACGACTGCCA...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGACGTTCCCGCTACACTaGCACTGGTGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLTFPLH*HWWQGW
Trigger: CCAGCCCTGCCACCAGTGCCAGTGTAGCGGGAACGT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCCGTTCTCGTGGCACTaGGCCGAGGCAGCGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHPFSWH*AEAAPS
Trigger: ACTGGGCGCTGCCTCGGCCCAGTGCCACGAGAACGG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCCGCCTGGACCTCCTaGTACCTGTCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAAWTS*YLSSRS
Trigger: GGACCTGGAGGACAGGTACCAGGAGGTCCAGGCGGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGCGGCTCTGGCCTCCTaGTGCAGCTTTGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGAALAS*CSFVRG
Trigger: ACCCCTCACAAAGCTGCACCAGGAGGCCAGAGCCGC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGGGTCAGGGCGGCTCTaGCCTCCTGGTGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHGSGRL*PPGAAL
Trigger: CAAAGCTGCACCAGGAGGCCAGAGCCGCCCTGACCC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGACAGATGAGGAAGCCTaGGTCAGGGCGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLTDEEA*VRAALA
Trigger: GGCCAGAGCCGCCCTGACCCAGGCTTCCTCATCTGT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGGCCTGTTGGTCCCCTaGCTGTGTCGAGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGGLLVP*LCRAVG
Trigger: CCCTACAGCTCGACACAGCCAGGGGACCAACAGGCC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGGCCTGTTGGTCCCCTaGCTGTGTCGAGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLGLLVP*LCRAVG
Trigger: CCCTACAGCTCGACACAGCCAGGGGACCAACAGGCC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGCTTGCACACCCTGGTaGCCTCCCGCATGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGACTPW*PPAWQV
Trigger: CACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGGCCTTGCCATCTGCTaGAAGAGGGTCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSGLAIC*KRVWER
Trigger: CCTCTCCCAGACCCTCTTCCAGCAGATGGCAAGGCC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACACACCATCCCCCTCCTaGATGGCGCCCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHTPSPS*MAPLPA
Trigger: AGCAGGGAGGGGCGCCATCCAGGAGGGGGATGGTGT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCGCAGCCTGGACAGATaGGGAAGCCTGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHRSLDR*GSLGQG
Trigger: GCCCTGACCCAGGCTTCCTCATCTGTCCAGGCTGCG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGESWLP*QSLSQP
Trigger: AGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCGTTCTAGTGCCCACTaGGTCTCGTTCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLRSSAH*VSFRAW
Trigger: CCAGGCCCTGAACGAGACTCAGTGGGCACTAGAACG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCGTTCTAGTGCCCACTaGGTCTCGTTCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLRSSAH*VSFRAW
Trigger: CCAGGCCCTGAACGAGACTCAGTGGGCACTAGAACG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGCCAAGAGGAAATGCTaGGGAGTCCTGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGAKRKC*GVLGRG
Trigger: GCCTCTGCCCAGGACTCCTCAGCATTTCCTCTTGGC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCAGTTCGTCTCGAGCCTaGACCAGAGGTCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSSSSRA*TRGQLR
Trigger: CCTCAGCTGACCTCTGGTTCAGGCTCGAGACGAACT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCTGGTGACCCACTCCTaGAGCCCAGGGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHLVTHS*SPGLSS
Trigger: CGAGGAGAGCCCTGGGCTGCAGGAGTGGGTCACCAG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCGTTGCACTTGCACCTaGCGCCCACAGAGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLRCTCT*RPQRSR
Trigger: CCGACTTCTCTGTGGGCGGCAGGTGCAAGTGCAACG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCATGCCCGTTGCACTTaGACCTGCCGCCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGHARCT*TCRPQR
Trigger: TCTCTGTGGGCGGCAGGTGCAAGTGCAACGGGCATG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCTCCCGATCAAACGTaGATTCCTCGGAGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLAPDQT*IPRSGH
Trigger: GTGGCCGCTCCGAGGAATGCACGTTTGATCGGGAGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCAGCGGGATTGCAAGTaGAGGGTCTGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLQRDCK*RVCSLP
Trigger: AGGGAGGCTGCAGACCCTGCACTTGCAATCCCGCTG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGGTCTGCCAGCTGGGTaGAGGTCTTCTGGGATCCGG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHGLPAG*RSSGIR
Trigger: CCGGATCCCAGAAGACCTGCACCCAGCTGGCAGACC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGTGAGGGGTTCTGTTTaGCGTAGCGTCGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLVRGSV*RSVAWA
Trigger: TGCCCAGGCGACGCTACGGCAAACAGAACCCCTCAC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGTGAGGGGTTCTGTTTaGCGTAGCGTCGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGVRGSV*RSVAWA
Trigger: TGCCCAGGCGACGCTACGGCAAACAGAACCCCTCAC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTGCCTTCCTCTGCAATaGCGCCTGGTCCTTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHCLPLQ*RLVLGP
Trigger: CGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTCAGACGCCAGCACCTaGTGGGACGCCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHSDAST*WDACWS
Trigger: GCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCAGCTCCTGTCTGCGTaGTTCAGACGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLQLLSA*FRRQHL
Trigger: CAGGTGCTGGCGTCTGAAGCACGCAGACAGGAGCTG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCCTCCAGCTCCTGTCTaGGTGCTTCAGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLPPAPV*VLQTPA
Trigger: TGCTGGCGTCTGAAGCACGCAGACAGGAGCTGGAGG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCGCGATTCCCGGATCTaGTGCTCCATCTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLRDSRI*CSISLS
Trigger: GCTGAGCGAGATGGAGCAGCAGATCCGGGAATCGCG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSTHTQS*WQGRSH
Trigger: GTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCCGCATGGCAAGTGGTaGCGCAGGGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHPHGKW*RRAGLE
Trigger: TTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCCAATGCCGAGGCCTTaGCATCTGCTGGAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSPMPRP*HLLEEG
Trigger: ACCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGGGCCCTCGGTATGGTaGCTGCAGACACAGATCCCT +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLGPSVW*LQTQIP
Trigger: AGGGATCTGTGTCTGCAGCCACCATACCGAGGGCCC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCCGAAGAAACCCAGCTaGCACCTGTCACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGPKKPS*HLSQAW
Trigger: CCAGGCCTGTGACAGGTGCCAGCTGGGTTTCTTCGG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTGGGTGCAGGTCTTCTaGGATCCGGCCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHWVQVF*DPAWAQ
Trigger: CTGTGCCCAGGCCGGATCCCAGAAGACCTGCACCCA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGCCTGGGCAGCAGTCTaGAGGGTTCGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGAWAAV*RVRAAS
Trigger: TGAGGCTGCCCGAACCCTCCAGACTGCTGCCCAGGC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCGGCTCTGGCCTCCTaGTGCAGCTTTGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAALAS*CSFVRG
Trigger: ACCCCTCACAAAGCTGCACCAGGAGGCCAGAGCCGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACACAGATGAGGAAGCCTaGGTCAGGGCGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHTDEEA*VRAALA
Trigger: GGCCAGAGCCGCCCTGACCCAGGCTTCCTCATCTGT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCCTTCTTCTTGGCACTaGAGGAAAGAGGGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSPSSWH*RKEGPR
Trigger: ACGCGGCCCCTCTTTCCTCCAGTGCCAAGAAGAAGG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGTTCAGGGCCTGGGCTaGGGCTTGATGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHVQGLG*GLMGVQ
Trigger: CTGGACACCCATCAAGCCCCAGCCCAGGCCCTGAAC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTCACTCTCGAAGCCCTaGATCTGCAGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSSLSKP*ICSSCC
Trigger: GCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGTATGGGCACACCTGTaGGGTAGTGTGCACCCCCTG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLVWAHL*GSVHPL
Trigger: CAGGGGGTGCACACTACCCCACAGGTGTGCCCATAC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGATCACAGGCTGAAGTaGGTACAGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGDHRLK*VQARVG
Trigger: GCCCACCCTGGCCTGTACCCACTTCAGCCTGTGATC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGTCCGGTCCACATGCTaGCCACCTACTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSVRSTC*PPTRCV
Trigger: GACACACCTAGTAGGTGGCCAGCATGTGGACCGGAC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGTCTAATGGGAGGTACTaGCCCAGCCACGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLSNGRY*PSHELG
Trigger: GCCGAGCTCGTGGCTGGGCCAGTACCTCCCATTAGA...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTCTAATGGGAGGTACTaGCCCAGCCACGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLSNGRY*PSHELG
Trigger: GCCGAGCTCGTGGCTGGGCCAGTACCTCCCATTAGA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAACACCATCCCCCTCCTaGATGGCGCCCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGTPSPS*MAPLPA
Trigger: AGCAGGGAGGGGCGCCATCCAGGAGGGGGATGGTGT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTGGAGTGATGCAAGCTaGCCGAGCCCCAACCCTGCG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHWSDAS*PSPNPA
Trigger: CGCAGGGTTGGGGCTCGGCCAGCTTGCATCACTCCA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTTCAACCTGGGGTCCTaGAGTGATGCAAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSFNLGS*SDASWP
Trigger: CGGCCAGCTTGCATCACTCCAGGACCCCAGGTTGAA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGCCTGGGCTGGGGCTTaGTGGGTGTCCAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVAWAGA*WVSSDP
Trigger: GGGGTCGCTGGACACCCATCAAGCCCCAGCCCAGGC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCACCAGCCGGGGAGGGTaGGGCACACCACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVTSRGG*GTPPCP
Trigger: TGGGCAGGGTGGTGTGCCTCACCCTCCCCGGCTGGT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCACCAGCCGGGGAGGGTaGGGCACACCACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETTSRGG*GTPPCP
Trigger: TGGGCAGGGTGGTGTGCCTCACCCTCCCCGGCTGGT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCCAAGAGCCCTGACTaGGCAGCTCCAACATCCCAC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAKSPD*AAPTSH
Trigger: GTGGGATGTTGGAGCTGCTCAGTCAGGGCTCTTGGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTACCGAGGTGGGGTACTaGACGCCGAAGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGTEVGY*TPKAMD
Trigger: GTCCATGGCCTTCGGCGTGCAGTACCCCACCTCGGT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACTGGAGAAGGCCACGTTaGCGCCACTCAGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHWRRPR*RHSAGR
Trigger: TCTCCCCGCTGAGTGGCGGCAACGTGGCCTTCTCCA...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCGCACTCGCTGGCATaGCCGTTGCACTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGPHSLA*PLHLHL
Trigger: CAGGTGCAAGTGCAACGGGCATGCCAGCGAGTGCGG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGGCCCGCGAAAGGGTTaGCATAGAAACCTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSGPRKG*HRNLAN
Trigger: GTTTGCCAGGTTTCTATGGCAACCCTTTCGCGGGCC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAGGCATGCATTTGTCTaGGGGTCGAGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGRHAFV*GSRGQG
Trigger: GCCCTGGCCCCTCGACCCGCAGACAAATGCATGCCT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCCTGCACACGCATGTaGCGTTCTCGTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGACTRM*RSRGTG
Trigger: CCCAGTGCCACGAGAACGGCACATGCGTGTGCAGGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGGCCTTCAGCTTGGCTaGCTCCTCCTTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHGLQLG*LLLHQG
Trigger: GCCCTGGTGAAGGAGGAGGCAGCCAAGCTGAAGGCC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTCTGCGCCAACTTGCTaGACGGTGGCCAACACGCTT +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLSAPTC*TVANTL
Trigger: AAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATCAGACGCCAGCACCTaGTGGGACGCCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGSDAST*WDACWS
Trigger: GCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCCTCCAGCTCCTGTCTaGGTGCTTCAGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHPPAPV*VLQTPA
Trigger: TGCTGGCGTCTGAAGCACGCAGACAGGAGCTGGAGG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTTCTCGGGCAGGCTGTaGAGAATGGCCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLFSGRL*RMASRF
Trigger: GAACCTGGAGGCCATTCTGCACAGCCTGCCCGAGAA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGTTCTCGGGCAGGCTGTaGAGAATGGCCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLFSGRL*RMASRF
Trigger: GAACCTGGAGGCCATTCTGCACAGCCTGCCCGAGAA...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGCCCGTTTATGCATGTaGAGGGGTGAGAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSARLCM*RGESVH
Trigger: GTGCACACTCTCACCCCTGCACATGCATAAACGGGC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGCCAGGAATGGGCCTTaGTCTAGCCAGACTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGARNGP*SSQTSR
Trigger: CCTGCTAGTCTGGCTAGAGCAAGGCCCATTCCTGGC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGGGCAGAGGCCAGCATaGGGGCCTGGCCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRGQRPA*GPGHRA
Trigger: CGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTGCCC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGGGAGAGGGGAGGGATaGCAAGAGGAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGGRGEG*QEEMLR
Trigger: CCTCAGCATTTCCTCTTGGCATCCCTCCCCTCTCCC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGGGAGAGGGGAGGGATaGCAAGAGGAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLGRGEG*QEEMLR
Trigger: CCTCAGCATTTCCTCTTGGCATCCCTCCCCTCTCCC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGAACGGAATTGGTCTGTaGTGCTGCCCTACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLNGIGL*CCPTPA
Trigger: GGCAGGGGTAGGGCAGCAGCACAGACCAATTCCGTT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCACGAGCTCGGCTTTTaGCACCTTCCTACCAACGTC +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSHELGF*HLPTNV
Trigger: GACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGAGTGGGCAGAGATCATaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLSGQRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATCTCTGCCCACT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGGCTGCGCTTGTAGATaGCAAAGCTCTCAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLGCACR*QSSQGD
Trigger: GTCGCCCTGAGAGCTTTGCCATCTACAAGCGCAGCC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACAGGGAGCCTGCCGACTaGCAGTCACAGGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHREPAD*QSQGWH
Trigger: ATGCCAGCCCTGTGACTGCCAGTCGGCAGGCTCCCT...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCCTGTGTCATCGCACTaGAGGTGTAGGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHPVSSH*RCREPA
Trigger: GGCAGGCTCCCTACACCTCCAGTGCGATGACACAGG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCTCCACCCAGGAGGCTaGCGGGGAAAGCCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVLHPGG*RGKPWP
Trigger: CGGCCAGGGCTTTCCCCGCCAGCCTCCTGGGTGGAG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGATGGGCCCTCGGTATaGTGGCTGCAGACACAGATC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLDGPSV*WLQTQI
Trigger: GATCTGTGTCTGCAGCCACCATACCGAGGGCCCATC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGACTGACCGAGCCCTGTaGGTGACAGCTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGTDRAL*VTAARH
Trigger: ATGCCTTGCAGCTGTCACCCACAGGGCTCGGTCAGT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGGCAGGCAGGAGCATTaGCCTGTCACTGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGGRQEH*PVTGSQ
Trigger: CTGCGACCCAGTGACAGGCCAATGCTCCTGCCTGCC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGTCTGGCCTTCAGCTTaGCTGCCTCCTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGVWPSA*LPPPSP
Trigger: TGGTGAAGGAGGAGGCAGCCAAGCTGAAGGCCAGAC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGTCACTGTCGCAGCCTaGACAGATGAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLVTVAA*TDEEAW
Trigger: CCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGAC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCTCTGCAATGCCGCCTaGTCCTTGGGCCGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGLCNAA*SLGRGN
Trigger: GTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCCTTCTTCTTGGCACTaGAGGAAAGAGGGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLPSSWH*RKEGPR
Trigger: ACGCGGCCCCTCTTTCCTCCAGTGCCAAGAAGAAGG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATGCTGGGACGCCTGTTaGAGCGTGGCTTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGCWDAC*SVACVW
Trigger: CCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACTGCTGGGACGCCTGTTaGAGCGTGGCTTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHCWDAC*SVACVW
Trigger: CCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCA...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGTTCAGGGCCTGGGCTaGGGCTTGATGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGVQGLG*GLMGVQ
Trigger: CTGGACACCCATCAAGCCCCAGCCCAGGCCCTGAAC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGTCACTCTCGAAGCCCTaGATCTGCAGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLSLSKP*ICSSCC
Trigger: GCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGA...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCATTTCTTGGCCTGTTaGTCCCCTGGCTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSHFLAC*SPGCVE
Trigger: CTCGACACAGCCAGGGGACCAACAGGCCAAGAAATG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGGGTACAGGCCAGGGTaGGCCATTCCCTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGGYRPG*AIPSGH
Trigger: ATGCCCTGAGGGAATGGCCCACCCTGGCCTGTACCC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGTGGTGCCGCAGGGCTaGTCTGGAAAGCGTCAATTA +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSVVPQG*SGKRQL
Trigger: TAATTGACGCTTTCCAGACCAGCCCTGCGGCACCAC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGCTTGCACACCCTGGTaGCCTCCCGCATGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHACTPW*PPAWQV
Trigger: CACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCTTGCACACCCTGGTaGCCTCCCGCATGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGACTPW*PPAWQV
Trigger: CACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGTCCGGTCCACATGCTaGCCACCTACTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLVRSTC*PPTRCV
Trigger: GACACACCTAGTAGGTGGCCAGCATGTGGACCGGAC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCTTAAACCTGGGAGGTaGAGGATGCAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSLKPGR*RMQWAE
Trigger: CTCTGCCCACTGCATCCTCCACCTCCCAGGTTTAAG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCACCTTGGGGTCCTTaGAGATGTCGTCCCCAAACG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAPWGP*RCRPQT
Trigger: CGTTTGGGGACGACATCTTCAAGGACCCCAAGGTGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCTGGCCGGGCGGATGTaGGCCGGACCTCAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVLAGRM*AGPQSG
Trigger: TCCTGACTGAGGTCCGGCTCACATCCGCCCGGCCAG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAACCGAGCCCTGTGGGTaGCAGCTGCAAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGTEPCG*QLQGMH
Trigger: ATGCATGCCTTGCAGCTGTCACCCACAGGGCTCGGT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCCTGGTGCAGCTTTGTaGGGGGTTCTGTTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLPGAAL*GVLFAV
Trigger: TACGGCAAACAGAACCCCTCACAAAGCTGCACCAGG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAAGAATCGGCAGGGAGTaGCTATCCACACGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGRIGRE*LSTRGR
Trigger: TCGCCCCCGTGTGGATAGTCACTCCCTGCCGATTCT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGCACTCATGTCCAGGTaGACTGGGTACGCACACTCA +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLALMSR*TGYAHS
Trigger: TGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGCCAAGAGGAAATGCTaGGGAGTCCTGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHAKRKC*GVLGRG
Trigger: GCCTCTGCCCAGGACTCCTCAGCATTTCCTCTTGGC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCACCAGCCGGGGAGGGTaGGGCACACCACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRTSRGG*GTPPCP
Trigger: TGGGCAGGGTGGTGTGCCTCACCCTCCCCGGCTGGT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGTACGTGGTAAGTGCCTaGGAGGACAGGGTAGGTACC +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLYVVSA*EDRVGT
Trigger: GGTACCTACCCTGTCCTCTCAGGCACTTACCACGTA...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCCAAGAGCCCTGACTaGGCAGCTCCAACATCCCAC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGAKSPD*AAPTSH
Trigger: GTGGGATGTTGGAGCTGCTCAGTCAGGGCTCTTGGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGCCAAGAGCCCTGACTaGGCAGCTCCAACATCCCAC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGAKSPD*AAPTSH
Trigger: GTGGGATGTTGGAGCTGCTCAGTCAGGGCTCTTGGC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATGCGGCCAAGAGCCCTaGCTGAGCAGCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGCGQEP*LSSSNI
Trigger: GATGTTGGAGCTGCTCAGTCAGGGCTCTTGGCCGCA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACACAGGTGTCCAGGCTaGCAGCGGGATTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGHRCPG*QRDCKC
Trigger: GCACTTGCAATCCCGCTGGCAGCCTGGACACCTGTG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGGGTCACAGGTGCCATaGTGGTTACAGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHGSQVP*WLQVQG
Trigger: CCCCTGCACCTGTAACCAGCATGGCACCTGTGACCC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCCCTTGTTCAGCCTCTaGAGCTGCTCCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVPLFSL*SCSRAA
Trigger: GGCCGCCCGGGAGCAGCTGCAGAGGCTGAACAAGGG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACTTCAGGCAGCACCTCTaGCACAGCCGTCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHFRQHL*HSRPQC
Trigger: GCACTGAGGACGGCTGTGGCAGAGGTGCTGCCTGAA...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACGCGATTCCCGGATCTaGTGCTCCATCTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGRDSRI*CSISLS
Trigger: GCTGAGCGAGATGGAGCAGCAGATCCGGGAATCGCG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTCGAAGCCCTGGATCTaGAGCTCCTGCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHSKPWI*SSCCWD
Trigger: ATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCAGGGGTGAGAGTGTaGACTCATGTCCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLAGVRV*THVQVN
Trigger: GTTCACCTGGACATGAGTGCACACTCTCACCCCTGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGGGTGTGCCCGTTTATaGATGTGCAGGGGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGGCARL*MCRGES
Trigger: ACTCTCACCCCTGCACATGCATAAACGGGCACACCC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGACCCCCTTGATCTCTaGAGATCTGCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLDPLDL*RSAETS
Trigger: GGAGGTCTCAGCAGATCTGCAGAGATCAAGGGGGTC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGTCGAGCTGTAGGGAGTaGACGCAGCAACACAGGTCA +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGSSCRE*TQQHRS
Trigger: TGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGA...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTCGAGCTGTAGGGAGTaGACGCAGCAACACAGGTCA +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLSSCRE*TQQHRS
Trigger: TGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCACCCTCCCGGGATCTTaGATTTCTTGGCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSTLPGS*ISWPVG
Trigger: ACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAAAGGTCAACTGGGTTaGCGGGGGCACAGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGKGQLG*RGHRGV
Trigger: CACGCCTCTGTGCCCCCGGCAACCCAGTTGACCTTT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGGGCAGAGGCCAGCATaGGGGCCTGGCCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLGQRPA*GPGHRA
Trigger: CGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTGCCC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACGAGGCCTTGCCATCTaGTGGAAGAGGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGRGLAI*WKRVWE
Trigger: CTCCCAGACCCTCTTCCAGCAGATGGCAAGGCCTCG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGGAATTGGTCTGTGCTaGTGCCCTACCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGGIGLC*CPTPAP
Trigger: AGGGGCAGGGGTAGGGCAGCAGCACAGACCAATTCC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAACGTCCGGTCCACATaGTGGCCACCTACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLNVRST*WPPTRC
Trigger: ACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTT...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGAACGTCCGGTCCACATaGTGGCCACCTACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGNVRST*WPPTRC
Trigger: ACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGCACGCCGAAGGCCATaGACGGGCTCTGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVARRRP*TGSATR
Trigger: CCTGGTGGCAGAGCCCGTCCATGGCCTTCGGCGTGC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCACAGATCCCTGTGTTaGGGTCACAGGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLHRSLC*GHRCHA
Trigger: AGCATGGCACCTGTGACCCCAACACAGGGATCTGTG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACCACAGTCGGACCCTTaGAGCCACCCCTCCGTCAAA +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGPQSDP*SHPSVK
Trigger: TTTGACGGAGGGGTGGCTCCAAGGGTCCGACTGTGG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCTTGGCACTGTCCTTaGCCAACACCTCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLAWHCP*PTPLLL
Trigger: GAGAAGCAGAGGTGTTGGCCAAGGACAGTGCCAAGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTGCAGCTCCTGCTGCTaGGATTCCTGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHCSSCC*DSCSSR
Trigger: TCTGCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCGGGGAATGTCTGTATaGGCACACCTGTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGRGMSV*AHLWGS
Trigger: ACTACCCCACAGGTGTGCCCATACAGACATTCCCCG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTGTCCAGCACACAGGTaGCTCTCACAACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLCPAHR*LSQQLW
Trigger: CCACAGCTGTTGTGAGAGCCACCTGTGTGCTGGACA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGGCCTTGCCATCTGCTaGAAGAGGGTCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGGLAIC*KRVWER
Trigger: CCTCTCCCAGACCCTCTTCCAGCAGATGGCAAGGCC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATCTAATGGGAGGTACTaGCCCAGCCACGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGSNGRY*PSHELG
Trigger: GCCGAGCTCGTGGCTGGGCCAGTACCTCCCATTAGA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGGTGGAGGATGCAGTaGGCAGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLRWRMQ*AEIMPL
Trigger: CAGTGGCATGATCTCTGCCCACTGCATCCTCCACCT...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCTTAAACCTGGGAGGTaGAGGATGCAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGLKPGR*RMQWAE
Trigger: CTCTGCCCACTGCATCCTCCACCTCCCAGGTTTAAG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCGCAGCCTGGACAGATaGGGAAGCCTGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVRSLDR*GSLGQG
Trigger: GCCCTGACCCAGGCTTCCTCATCTGTCCAGGCTGCG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCCTGGGCTGGGGCTTaGTGGGTGTCCAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLAWAGA*WVSSDP
Trigger: GGGGTCGCTGGACACCCATCAAGCCCCAGCCCAGGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCAGGGTAGGTACCTGTaGTCACACAACCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLQGRYL*SHNPSK
Trigger: TTTGCTGGGGTTGTGTGATCACAGGTACCTACCCTG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGAACCAGAGGTCAGCTaGGGGCCTCTCCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVEPEVS*GPLRTP
Trigger: TGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGATCCTCATTATCCTaGACGGGGGTTGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLRSSLS*TGVGGT
Trigger: AGTCCCACCAACCCCCGTTCAGGATAATGAGGATCT...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCAGCACACCTCTTCTCTaGACACCATCTCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSSTPLL*TPSPIR
Trigger: CCTAATGGGAGATGGTGTTCAGAGAAGAGGTGTGCT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGCCATGGACGGGCTCTaGCACCAGGTGCTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETAMDGL*HQVLSS
Trigger: GGACGAGAGCACCTGGTGGCAGAGCCCGTCCATGGC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGAGTCTGCCTTCCTCTaGAATGCCGCCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHESAFL*NAAWSL
Trigger: CAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGAGCATCCTCTCCGCCTaGTTGGTCTTCTTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGSILSA*LVFFLV
Trigger: CACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGATTCCCGGATCTGCTaGTCCATCTCGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHDSRIC*SISLSP
Trigger: TGGGCTGAGCGAGATGGAGCAGCAGATCCGGGAATC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGATTCCCGGATCTGCTaGTCCATCTCGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGDSRIC*SISLSP
Trigger: TGGGCTGAGCGAGATGGAGCAGCAGATCCGGGAATC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTATCTGCAGCTCCTGCTaGTGGGATTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGICSSC*WDSCSS
Trigger: GCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGAT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGACCCCCTTGATCTCTaGAGATCTGCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHDPLDL*RSAETS
Trigger: GGAGGTCTCAGCAGATCTGCAGAGATCAAGGGGGTC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGACCCTCCCGGGATCTTaGATTTCTTGGCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGTLPGS*ISWPVG
Trigger: ACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACTGCCTGACTTCCCAATaGCGAGGCCTTGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHCLTSQ*RGLAIC
Trigger: GCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCA...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTTGCCTGACTTCCCAATaGCGAGGCCTTGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGCLTSQ*RGLAIC
Trigger: GCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCA...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACAACGGAATTGGTCTGTaGTGCTGCCCTACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHNGIGL*CCPTPA
Trigger: GGCAGGGGTAGGGCAGCAGCACAGACCAATTCCGTT...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCTTTACGTGGTAAGTaGCTGAGAGGACAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLALRGK*LRGQGR
Trigger: CCTACCCTGTCCTCTCAGGCACTTACCACGTAAAGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGATGGCGCCCCTCCCTaGTCCTCACCATCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETDGAPP*SSPSSD
Trigger: GTCCGAGGATGGTGAGGAGCAGGGAGGGGCGCCATC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAAGTGGGCAGAGATCATaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGSGQRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATCTCTGCCCACT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGTTGGGCCGGGGAAACTaGAGCTTCATTCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGLGRGN*SFIPAN
Trigger: GTTTGCAGGAATGAAGCTGCAGTTTCCCCGGCCCAA...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS-3UTR GCA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGGCCTTGGCAAGCTCTaGTTCTCTGCCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLGLGKL*FSALLL
Trigger: AAGAAGAAGGGCAGAGAAGCAGAGCTTGCCAAGGCC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCACCGGCAGGCCAACTaGCCTGCCACGTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDHRQAN*PATSGP
Trigger: CGGCCCCGACGTGGCAGGCCAGTTGGCCTGCCGGTG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCCGGTGGTGTTGTGCTaGCACCGGCAGGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVPVVLC*HRQANW
Trigger: CCAGTTGGCCTGCCGGTGCCAGCACAACACCACCGG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCAGGGCAGACACTCGTaGGCAGCCTCGGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLQGRHS*AASAVP
Trigger: GGGCACCGCCGAGGCTGCCCACGAGTGTCTGCCCTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCGCGGAGGCGGAGGCTaGTCAGGTTGGCGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLRGGGG*SGWRGA
Trigger: GGCTCCTCGCCAACCTGACCAGCCTCCGCCTCCGCG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTGGCGGGGAAAGCCCTaGCCGGGCGGATGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLWRGKP*PGGCEP
Trigger: CGGCTCACATCCGCCCGGCCAGGGCTTTCCCCGCCA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGGCTTCCCGAGCCCCTaGAAGCAGGTGATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETGFPSP*KQVMAL
Trigger: CAGGGCCATCACCTGCTTCCAGGGGCTCGGGAAGCC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGGGCCCTCCAAGCAGTaGCTGCGATCTTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVGPSKQ*LRSWWR
Trigger: CCGCCACCAAGATCGCAGCCACTGCTTGGAGGGCCC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACCTTCTTCTTGGCACTaGAGGAAAGAGGGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGPSSWH*RKEGPR
Trigger: ACGCGGCCCCTCTTTCCTCCAGTGCCAAGAAGAAGG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCCCTCAGCAAGGCCTTaGCAAGCTTGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHPSARP*QAWHCP
Trigger: AGGACAGTGCCAAGCTTGCCAAGGCCTTGCTGAGGG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGACGCCAGCACCTGCTaGGACGCCTGTTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETDASTC*DACWSV
Trigger: CACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGCCCTCACTGCCAGCTaGCACAGTTCTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETALTAS*HSSRAG
Trigger: GCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCTGTGTGCCGGGGATCTaGGCAGCCCTCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVCVPGI*AALTAS
Trigger: GCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACA...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTGTCCAGCACACAGGTaGCTCTCACAACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHCPAHR*LSQQLW
Trigger: CCACAGCTGTTGTGAGAGCCACCTGTGTGCTGGACA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCTGGTGGCCTCCCGCATaGCAAGTGGTGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRWWPPA*QVVPQG
Trigger: GCCCTGCGGCACCACTTGCCATGCGGGAGGCCACCA...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCAGACAGGACAGACTaGAATGGCAGCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGPDRTD*NGSQAC
Trigger: GCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACCAGACAGGACAGACTaGAATGGCAGCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGPDRTD*NGSQAC
Trigger: GCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCCTCAGCAAGGCCTTaGCAAGCTCTGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGPSARP*QALLLC
Trigger: GCAGAGAAGCAGAGCTTGCCAAGGCCTTGCTGAGGG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
3UTR CAA 72 bp ATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTaGCACACCCTGGTGGCCTCCCGCATGGCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: IPRQDRLEWQPG*HTLVASRMASG
Trigger: ACCACTTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTGGTCACGGCAGTGGTaGCAGCGCCCGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDWSRQW*QRPPWP
Trigger: AGGCCACGGCGGGCGCTGTCACCACTGCCGTGACCA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGGGGCTGCCCATAGCTaGACCGCTGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRGAAHS*TAGLPG
Trigger: TCCTGGGAGACCAGCGGTTCAGCTATGGGCAGCCCC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGACGTGTGTATGTTATTaGCACTGGGGTGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLTCVCY*HWGVPV
Trigger: AACGGGCACACCCCAGTGTCAATAACATACACACGT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCACCACCCTGCCCAGTaGAAGGGTCCTTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHHHPAQ*KGPLFP
Trigger: TGGAAATAAAGGACCCTTTCACTGGGCAGGGTGGTG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATACGTGGTAAGTGCCTaGGAGGACAGGGTAGGTACC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGYVVSA*EDRVGT
Trigger: GGTACCTACCCTGTCCTCTCAGGCACTTACCACGTA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTTCGGACACTTGGCTGTaGGTTCGTCTCGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGSDTWL*VRLEPE
Trigger: TTCAGGCTCGAGACGAACTCACAGCCAAGTGTCCGA...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGGCTGCCAGCGGGATTaGAAGTGCAGGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVGCQRD*KCRVCS
Trigger: GCTGCAGACCCTGCACTTGCAATCCCGCTGGCAGCC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAGCAGAAACAGCTGCTaGAGCCAGCTGGATTGTGGG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGSRNSC*SQLDCG
Trigger: CCCACAATCCAGCTGGCTGCAGCAGCTGTTTCTGCT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTTGTTGGGGTCACAGGTaGCATGCTGGTTACAGGTGC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGCWGHR*HAGYRC
Trigger: GCACCTGTAACCAGCATGGCACCTGTGACCCCAACA...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGCCTCAGTGGCCATGTaGTGCCATGATGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHASVAM*CHDATV
Trigger: GACAGTTGCATCATGGCAGCACATGGCCACTGAGGC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCAGGGGTGAGAGTGTaGACTCATGTCCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGAGVRV*THVQVN
Trigger: GTTCACCTGGACATGAGTGCACACTCTCACCCCTGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCCCGTTTATGCATGTaGAGGGGTGAGAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGARLCM*RGESVH
Trigger: GTGCACACTCTCACCCCTGCACATGCATAAACGGGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGCCCGTTTATGCATGTaGAGGGGTGAGAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHARLCM*RGESVH
Trigger: GTGCACACTCTCACCCCTGCACATGCATAAACGGGC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGATTGACACTGGGGTGTaGCCGTTTATGCATGTGCAG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLIDTGV*PFMHVQ
Trigger: CTGCACATGCATAAACGGGCACACCCCAGTGTCAAT...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATCGAGCTGTAGGGAGTaGACGCAGCAACACAGGTCA +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGSSCRE*TQQHRS
Trigger: TGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCTGGGCCCGCAGAGGTaGCTGACTTCCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETLGPQR*LTSQCR
Trigger: TCGGCATTGGGAAGTCAGGCACCTCTGCGGGCCCAG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCTGCTGCCCTACCCCTaGCCCTGTCAGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLLLPYP*PCQGSH
Trigger: GTGGCTCCCCTGACAGGGGCAGGGGTAGGGCAGCAG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCACGAGCTCGGCTTTTaGCACCTTCCTACCAACGTC +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGHELGF*HLPTNV
Trigger: GACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCTGGTAGGGCTCCCATaGGCCGTCGGCGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPLVGLP*AVGAAA
Trigger: CGCAGCCGCGCCGACGGCCCATGGGAGCCCTACCAG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCTCAGTCAGGAACACTaGACCGGCAGGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRLSQEH*TGRAGA
Trigger: GGCCCCAGCCCTGCCGGTCCAGTGTTCCTGACTGAG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCACCTCCCGGCTCTCTaGGATGGTCGTACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETHLPAL*DGRTGR
Trigger: TCGGCCTGTACGACCATCCCAGAGAGCCGGGAGGTG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCACTGGTGGCAGGGCTaGGGGTGCCCAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLHWWQG*GCPKSP
Trigger: GGGGCTCTTTGGGCACCCCCAGCCCTGCCACCAGTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGGGCACGGGCCTCTGTaGCCAGGTGGCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRGHGPL*PGGSIW
Trigger: CCAAATGGAGCCACCTGGCCACAGAGGCCCGTGCCC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGTCCTCAGTGCTTTCTaGGCCGCCTGGACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETVLSAF*AAWTSW
Trigger: CCAGGAGGTCCAGGCGGCCCAGAAAGCACTGAGGAC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCTGCCGTAGCGTCGCCTaGGCAGCAGTCTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETCRSVA*AAVWRV
Trigger: AACCCTCCAGACTGCTGCCCAGGCGACGCTACGGCA...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCACAGATGAGGAAGCCTaGGTCAGGGCGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVTDEEA*VRAALA
Trigger: GGCCAGAGCCGCCCTGACCCAGGCTTCCTCATCTGT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACTCTGCCCTTCTTCTTaGCACTGGAGGAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGLCPSS*HWRKEG
Trigger: CCCCTCTTTCCTCCAGTGCCAAGAAGAAGGGCAGAG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAGGCCTTGGCAAGCTTaGCACTGTCCTTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGRPWQA*HCPWPT
Trigger: TGTTGGCCAAGGACAGTGCCAAGCTTGCCAAGGCCT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCAGCGTGGCTTGCGTCTaGCTGGTGAGCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVSVACV*LVSLLA
Trigger: TGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCTGCTGGGACGCCTGTTaGAGCGTGGCTTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETCWDAC*SVACVW
Trigger: CCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCA...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGGGTACAGGCCAGGGTaGGCCATTCCCTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVGYRPG*AIPSGH
Trigger: ATGCCCTGAGGGAATGGCCCACCCTGGCCTGTACCC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTTGGGCCTGGCTCTTTaGATAGATCACAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLLGLAL*IDHRLK
Trigger: CTTCAGCCTGTGATCTATCCAAAGAGCCAGGCCCAA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCCAGCATGCGGGCCTaGCCACAGGGCGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLASMRA*PQGDSQ
Trigger: CTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGGCTATCTCCAACACGTaGCAGCCGTTTTTACTCCAG +
Preference number: 4 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLAISNT*QPFLLQ
Trigger: CTGGAGTAAAAACGGCTGCCACGTGTTGGAGATAGC...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAAGGTGGAGGATGCAGTaGGCAGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGRWRMQ*AEIMPL
Trigger: CAGTGGCATGATCTCTGCCCACTGCATCCTCCACCT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGATGACATGTACACCTaGGGCCATTATGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHDDMYT*GHYGGW
Trigger: CCATCCCCCATAATGGCCCCAGGTGTACATGTCATC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGGCTGTGGAAGTCGGTaGGGTAGGAGGCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVGCGSR*GRRRCG
Trigger: ACCACAACGCCTCCTACCTCACCGACTTCCACAGCC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGCGGGGAGATGTCGCTaGACTCAGAGGTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETAGRCR*TQRCRR
Trigger: CCTTCTGCACCTCTGAGTTCAGCGACATCTCCCCGC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGGAGTTCGGTGCTGGTaGCCCACTCCTGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLGVRCW*PTPAAQ
Trigger: CTGGGCTGCAGGAGTGGGTCACCAGCACCGAACTCC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCTCCCGTGCAGTCACATaGGGCAGGCAGGAGCATTGG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETSRAVT*GRQEHW
Trigger: CCAATGCTCCTGCCTGCCTCATGTGACTGCACGGGA...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTGGGAGCCCAGTGGGTaGCACTTGCAGCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLWEPSG*HLQLRQ
Trigger: CTGCCGGAGCTGCAAGTGTCACCCACTGGGCTCCCA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVESWLP*QSLSQP
Trigger: AGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGATGTCCTTCTCCAGTaGGATACGCGATTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGDVLLQ*DTRFPD
Trigger: ATCCGGGAATCGCGTATCTCACTGGAGAAGGACATC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGCCAAGAGGAAATGCTaGGGAGTCCTGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVAKRKC*GVLGRG
Trigger: GCCTCTGCCCAGGACTCCTCAGCATTTCCTCTTGGC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCAGGGTAGGTACCTGTaGTCACACAACCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGQGRYL*SHNPSK
Trigger: TTTGCTGGGGTTGTGTGATCACAGGTACCTACCCTG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGCTTGCAGGCGCAGGTaGCTGTGTCATCGCACTGGA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVACRRR*LCHRTG
Trigger: TCCAGTGCGATGACACAGGCACCTGCGCCTGCAAGC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCCTGTGGGTGACAGCTaGAAGGCATGCATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHPVGDS*KACICL
Trigger: CAGACAAATGCATGCCTTGCAGCTGTCACCCACAGG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGTGGTCCCCAGGGACTaGCACAGTCGGACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRVVPRD*HSRTLG
Trigger: TCCAAGGGTCCGACTGTGGCAGTCCCTGGGGACCAC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCCTCCAAGCAGTGGCTaGGATCTTGGTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVPPSSG*DLGGGV
Trigger: GACACCGCCACCAAGATCGCAGCCACTGCTTGGAGG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCACAGCCGTCCTCAGTaGTTTCTGGGCCGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRHSRPQ*FLGRLD
Trigger: GTCCAGGCGGCCCAGAAAGCACTGAGGACGGCTGTG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCTGTTGGAGCGTGGCTTaGGTCTGGCTGGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETCWSVA*VWLVSL
Trigger: CAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACA...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCTGTTGGAGCGTGGCTTaGGTCTGGCTGGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVCWSVA*VWLVSL
Trigger: CAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACA...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCCCGGGGAGCCCAGCTaGAGCCTCAGGCGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLPGEPS*SLRRSS
Trigger: ACTAGAACGCCTGAGGCTGCAGCTGGGCTCCCCGGG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCAGACTGAGTTTCCTCTaGAAGGACCCCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVRLSFL*KDPGEP
Trigger: GGGCTCCCCGGGGTCCTTGCAGAGGAAACTCAGTCT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCTGGGCAGCCCTCACTaGCAGCTGGCACAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRLGSPH*QLAQFS
Trigger: CGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACATTGACACTGGGGTGTaGCCGTTTATGCATGTGCAG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHIDTGV*PFMHVQ
Trigger: CTGCACATGCATAAACGGGCACACCCCAGTGTCAAT...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTCTCATGTAACAACTTaGCCAACATCCAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSSHVTT*PTSRGC
Trigger: ACACCCTCTGGATGTTGGGCAAGTTGTTACATGAGA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCCGCATGGCAAGTGGTaGCGCAGGGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRPHGKW*RRAGLE
Trigger: TTCCAGACCAGCCCTGCGGCACCACTTGCCATGCGG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAATGGCAGCCAGGCTTaGACACCCTGGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRNGSQA*TPWWPP
Trigger: GGGAGGCCACCAGGGTGTGCAAGCCTGGCTGCCATT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGGAATTGGTCTGTGCTaGTGCCCTACCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVGIGLC*CPTPAP
Trigger: AGGGGCAGGGGTAGGGCAGCAGCACAGACCAATTCC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGCTTTACGTGGTAAGTaGCTGAGAGGACAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGALRGK*LRGQGR
Trigger: CCTACCCTGTCCTCTCAGGCACTTACCACGTAAAGC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCGAAGTTGTAGGCGCTaGGCCGGCCCTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDRSCRR*AGPPGW
Trigger: CCACCCTGGAGGGCCGGCCCAGCGCCTACAACTTCG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCCCACGGGCGGTCCTaGAAGAAGGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPAHGRS*KKGRQR
Trigger: GCGCTGCCTGCCCTTCTTCCAGGACCGCCCGTGGGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCCCTCACTGAGCGAGTaGAACCCGGGCAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLPSLSE*NPGRQR
Trigger: CCGCTGTCTGCCCGGGTTCCACTCGCTCAGTGAGGG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCAGTTGCCCACGGCATTaGGGTCCACGTTCCCGCTAC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVSCPRH*GPRSRY
Trigger: GTAGCGGGAACGTGGACCCCAATGCCGTGGGCAACT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGGGTCAGGGCGGCTCTaGCCTCCTGGTGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLGSGRL*PPGAAL
Trigger: CAAAGCTGCACCAGGAGGCCAGAGCCGCCCTGACCC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTTCCTCTCCGCCTGCTTaGTCTTCTTTCTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGSSPPA*SSFSCL
Trigger: CAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGA...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGCAGGCTGTGCAGAATaGCCTCCAGGTTCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGAGCAE*PPGSVC
Trigger: ACAAACAGAACCTGGAGGCCATTCTGCACAGCCTGC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCCCTCACTGCCAGCTaGCACAGTTCTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLALTAS*HSSRAG
Trigger: GCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGTATGGGCACACCTGTaGGGTAGTGTGCACCCCCTG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETVWAHL*GSVHPL
Trigger: CAGGGGGTGCACACTACCCCACAGGTGTGCCCATAC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGATCACAGGCTGAAGTaGGTACAGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVDHRLK*VQARVG
Trigger: GCCCACCCTGGCCTGTACCCACTTCAGCCTGTGATC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGCCGCAGGGCTGGTCTaGAAAGCGTCAATTAAAGGT +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGAAGLV*KASIKG
Trigger: ACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCAATGCTGAGGAGTCCTaGGCAGAGGCCAGCATGCGG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETNAEES*AEASMR
Trigger: CCGCATGCTGGCCTCTGCCCAGGACTCCTCAGCATT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACACGTTCAACGGAATTaGTCTGTGCTGCTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGHVQRN*SVLLPY
Trigger: GTAGGGCAGCAGCACAGACCAATTCCGTTGAACGTG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCTGGAGTGATGCAAGCTaGCCGAGCCCCAACCCTGCG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRWSDAS*PSPNPA
Trigger: CGCAGGGTTGGGGCTCGGCCAGCTTGCATCACTCCA...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCTATCTCCAACACGTaGCAGCCGTTTTTACTCCAG +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAISNT*QPFLLQ
Trigger: CTGGAGTAAAAACGGCTGCCACGTGTTGGAGATAGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGATGACATGTACACCTaGGGCCATTATGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHDDMYT*GHYGGW
Trigger: CCATCCCCCATAATGGCCCCAGGTGTACATGTCATC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAGGCCCGGCAGCCCTTaGTGGAGAAGCCGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRRPGSP*WRSRRN
Trigger: GTTTCTTCGGCTTCTCCATCAAGGGCTGCCGGGCCT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGTGTGCCGTCTGCCGTaGGGAAGAAGTTGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRVCRLP*GRSCRG
Trigger: GCCACGACAACTTCTTCCTCACGGCAGACGGCACAC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACACGTGTGTATGTTATTaGCACTGGGGTGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHTCVCY*HWGVPV
Trigger: AACGGGCACACCCCAGTGTCAATAACATACACACGT...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACTGGACCGTAAGCTGCTaGCTGGATGGATTAGACTTG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHWTVSC*LDGLDL
Trigger: CAAGTCTAATCCATCCAGTCAGCAGCTTACGGTCCA...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTTGGACCGTAAGCTGCTaGCTGGATGGATTAGACTTG +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGWTVSC*LDGLDL
Trigger: CAAGTCTAATCCATCCAGTCAGCAGCTTACGGTCCA...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCCCTGCTATCTGGAGTaGGTGGATGTAGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVPCYLE*VDVAPQ
Trigger: CTGGGGTGCTACATCCACTCACTCCAGATAGCAGGG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCGCTGGCATGCCCGTTaGACTTGCACCTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDRWHAR*TCTCRP
Trigger: TGGGCGGCAGGTGCAAGTGCAACGGGCATGCCAGCG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGTGCCGGTGGTGTTGTaGTGGCACCGGCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDVPVVL*WHRQAN
Trigger: GTTGGCCTGCCGGTGCCAGCACAACACCACCGGCAC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTCTACCTCCCTGGGATaGCCGGCATCCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDSTSLG*PASWGP
Trigger: TGGCCCCCAGGATGCCGGGCATCCCAGGGAGGTAGA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGTACGGGGCTGTATCTaGGCCAACTTGCTGCACGGT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETVRGCI*ANLLHG
Trigger: ACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTAC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACTCAGTGGCCATGTGCTaGCATGATGCAACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHSVAMC*HDATVF
Trigger: GAAGACAGTTGCATCATGGCAGCACATGGCCACTGA...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGTCACTGACGGAGTCTaGCTTCCTCTGCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVVTDGV*LPLQCR
Trigger: GCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGAC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCTGTTGGAGCGTGGCTTaGGTCTGGCTGGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRCWSVA*VWLVSL
Trigger: CAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACA...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCTTCTCGGGCAGGCTGTaGAGAATGGCCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETFSGRL*RMASRF
Trigger: GAACCTGGAGGCCATTCTGCACAGCCTGCCCGAGAA...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETTHTQS*WQGRSH
Trigger: GTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCACAGGTCAGGGAGCTaGTGTGAAACAGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETHRSGS*CETEGS
Trigger: GCTGCCCTCTGTTTCACAGCAGCTCCCTGACCTGTG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCCAATGCCGAGGCCTTaGCATCTGCTGGAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETPMPRP*HLLEEG
Trigger: ACCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCTGCCTGACTTCCCAATaGCGAGGCCTTGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVCLTSQ*RGLAIC
Trigger: GCAGATGGCAAGGCCTCGGCATTGGGAAGTCAGGCA...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCTGGGCCCGCAGAGGTaGCTGACTTCCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLLGPQR*LTSQCR
Trigger: TCGGCATTGGGAAGTCAGGCACCTCTGCGGGCCCAG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCTGCTGCCCTACCCCTaGCCCTGTCAGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPLLPYP*PCQGSH
Trigger: GTGGCTCCCCTGACAGGGGCAGGGGTAGGGCAGCAG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCAACGGAATTGGTCTGTaGTGCTGCCCTACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVNGIGL*CCPTPA
Trigger: GGCAGGGGTAGGGCAGCAGCACAGACCAATTCCGTT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAAGCCAGGGCCCTGGCTaGCCACCAGCCGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRSQGPG*PPAGEG
Trigger: ACCCTCCCCGGCTGGTGGGCAGCCAGGGCCCTGGCT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGATGGCGCCCCTCCCTaGTCCTCACCATCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDDGAPP*SSPSSD
Trigger: GTCCGAGGATGGTGAGGAGCAGGGAGGGGCGCCATC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCCCTCTTGCCTGGAATaGTTCCTTCTCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVPSCLE*FLLCLP
Trigger: GGGGAGGCAGAGAAGGAAGCATTCCAGGCAAGAGGG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACTGTTGTCCACCCTCTTaGCTGGAATGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHCCPPS*LECFLL
Trigger: GAGAAGGAAGCATTCCAGGCAAGAGGGTGGACAACA...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGCTGCTGCAGCCAGCTaGATTGTGGGGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRAAAAS*IVGLQV
Trigger: AACCTGCAGCCCCACAATCCAGCTGGCTGCAGCAGC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCAGCCTTCGGCTCCCTaGTGGAAATCGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVQPSAP*WKSLRM
Trigger: CATCCTCAGCGATTTCCACCAGGGAGCCGAAGGCTG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGGAGGCTGGTCAGGTTaGCGAGGAGCCGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLGGWSG*RGAAGS
Trigger: ACTTCCAGCGGCTCCTCGCCAACCTGACCAGCCTCC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCACAGCGTTCACAGGATaGGCCCTCGGTATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETTAFTG*ALGMVA
Trigger: AGCCACCATACCGAGGGCCCATCCTGTGAACGCTGT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCCCGGCTCTCTGGGATaGTCGTACAGGCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDPGSLG*SYRPTG
Trigger: GCCAGTCGGCCTGTACGACCATCCCAGAGAGCCGGG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCACAGTGGTCACCCGTaGTGTTGTGCAGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRHSGHP*CCAGSA
Trigger: TGCGCTGCCTGCACAACACCACGGGTGACCACTGTG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTATTTGGTCGGCTGACTaGGACCTTCCTGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: GTGPATSSAFATFLPTSGIWSAD*DLPEES
Trigger: AGATTCCTCAGGAAGGTCCCAGTCAGCCGACCAAAT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCCAGGTGGCTCCATTTaGTCGGCTGACTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVPGGSI*SADWDL
Trigger: AAGGTCCCAGTCAGCCGACCAAATGGAGCCACCTGG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGGGTCAGGGCGGCTCTaGCCTCCTGGTGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDGSGRL*PPGAAL
Trigger: CAAAGCTGCACCAGGAGGCCAGAGCCGCCCTGACCC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCCGCCTGGTCCTTaGGCCGGGGAAACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLMPPGP*AGETAA
Trigger: AGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCAT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCTCTGCAATGCCGCCTaGTCCTTGGGCCGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLLCNAA*SLGRGN
Trigger: GTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCATGTAAACAGCAGGTaGGGGAGTGTGTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVHVNSR*GSVCRG
Trigger: TCCCCGGCACACACTCCCCCACCTGCTGTTTACATG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGTATGGGCACACCTGTaGGGTAGTGTGCACCCCCTG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRVWAHL*GSVHPL
Trigger: CAGGGGGTGCACACTACCCCACAGGTGTGCCCATAC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTCCCGCATGGCAAGTaGTGCCGCAGGGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLPHGK*CRRAGL
Trigger: CAGACCAGCCCTGCGGCACCACTTGCCATGCGGGAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAATGCTGAGGAGTCCTaGGCAGAGGCCAGCATGCGG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRNAEES*AEASMR
Trigger: CCGCATGCTGGCCTCTGCCCAGGACTCCTCAGCATT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTGGAGTGATGCAAGCTaGCCGAGCCCCAACCCTGCG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLWSDAS*PSPNPA
Trigger: CGCAGGGTTGGGGCTCGGCCAGCTTGCATCACTCCA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGCTATCTCCAACACGTaGCAGCCGTTTTTACTCCAG +
Preference number: 4 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHAISNT*QPFLLQ
Trigger: CTGGAGTAAAAACGGCTGCCACGTGTTGGAGATAGC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCATCTCCCATTAGGTTaGGGGGTGGCACCGGTCATC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETHLPLG*GVAPVI
Trigger: GATGACCGGTGCCACCCCCCAACCTAATGGGAGATG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLESWLP*QSLSQP
Trigger: AGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCGTTCTAGTGCCCACTaGGTCTCGTTCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLRSSAH*VSFRAW
Trigger: CCAGGCCCTGAACGAGACTCAGTGGGCACTAGAACG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGCACTCATGTCCAGGTaGACTGGGTACGCACACTCA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVALMSR*TGYAHS
Trigger: TGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCATGCATGTGCAGGGGTaGGAGTGTGCACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVMHVQG*ECALMS
Trigger: GGACATGAGTGCACACTCTCACCCCTGCACATGCAT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGAACCAGAGGTCAGCTaGGGGCCTCTCCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPEPEVS*GPLRTP
Trigger: TGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAGTTCGTCTCGAGCCTaGACCAGAGGTCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRSSSRA*TRGQLR
Trigger: CCTCAGCTGACCTCTGGTTCAGGCTCGAGACGAACT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGATCTGTCACATAGGTTaGCTTCCACATTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGICHIG*LPHSLC
Trigger: GCAAAGAGAATGTGGAAGGCAACCTATGTGACAGAT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCGGCTGCAGTCCCGTaGAGTCACATGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDAAAVP*SHMRQA
Trigger: TGCCTGCCTCATGTGACTGCACGGGACTGCAGCCGC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCACCTGGGCGGCAGGTaGACTGTCCAGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLHLGGR*TVQSWD
Trigger: ATCCCAAGACTGGACAGTGCACCTGCCGCCCAGGTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCCCGGGGAGCCCAGCTaGAGCCTCAGGCGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPPGEPS*SLRRSS
Trigger: ACTAGAACGCCTGAGGCTGCAGCTGGGCTCCCCGGG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGAGACTGAGTTTCCTCTaGAAGGACCCCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLRLSFL*KDPGEP
Trigger: GGGCTCCCCGGGGTCCTTGCAGAGGAAACTCAGTCT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCATCTGCAGCTCCTGCTaGTGGGATTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRICSSC*WDSCSS
Trigger: GCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGAT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCTCGAAGCCCTGGATCTaGAGCTCCTGCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRSKPWI*SSCCWD
Trigger: ATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGA...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGACCCCCTTGATCTCTaGAGATCTGCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVDPLDL*RSAETS
Trigger: GGAGGTCTCAGCAGATCTGCAGAGATCAAGGGGGTC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCACAGGTCAGGGAGCTaGTGTGAAACAGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRHRSGS*CETEGS
Trigger: GCTGCCCTCTGTTTCACAGCAGCTCCCTGACCTGTG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGAAAGGTCAACTGGGTTaGCGGGGGCACAGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLKGQLG*RGHRGV
Trigger: CACGCCTCTGTGCCCCCGGCAACCCAGTTGACCTTT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCGAGGCCTTGCCATCTaGTGGAAGAGGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLRGLAI*WKRVWE
Trigger: CTCCCAGACCCTCTTCCAGCAGATGGCAAGGCCTCG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTGGGCCCGCAGAGGTaGCTGACTTCCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLGPQR*LTSQCR
Trigger: TCGGCATTGGGAAGTCAGGCACCTCTGCGGGCCCAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGGAATTGGTCTGTGCTaGTGCCCTACCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLGIGLC*CPTPAP
Trigger: AGGGGCAGGGGTAGGGCAGCAGCACAGACCAATTCC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCACTAGGTGTGTCATATaGACACCCACAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVTRCVI*TPTARA
Trigger: GGCCCTGGCTGTGGGTGTGCATATGACACACCTAGT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCCCTCTTGCCTGGAATaGTTCCTTCTCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRPSCLE*FLLCLP
Trigger: GGGGAGGCAGAGAAGGAAGCATTCCAGGCAAGAGGG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCAAAGAAAGCCACTCTaGAAAGAGAAAAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGQRKPL*KEKRMG
Trigger: GCCCATTCTTTTCTCTTTGCAGAGTGGCTTTCTTTG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACACGTGTGCGAGGCCTaGGCGAGCCGCCCAAACGCC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRHVCEA*ASRPNA
Trigger: GGCGTTTGGGCGGCTCGCCCAGGCCTCGCACACGTG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCAGCTCTCAGGGCGACTaGTGTGGAACTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVSSQGD*CGTSAS
Trigger: TGAGGCTGAAGTTCCACACCAGTCGCCCTGAGAGCT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGGATGCCCGGCATCCTaGGGGCCAGACAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPGCPAS*GPDRLE
Trigger: CTCTAGCCTGTCTGGCCCCCAGGATGCCGGGCATCC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCCGTCAAAGTCAGTCTaGCCTTCAGCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVPSKSV*PSAWLP
Trigger: AGGCAGCCAAGCTGAAGGCCAGACTGACTTTGACGG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGCTTGGCACTGTCCTTaGCCAACACCTCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVAWHCP*PTPLLL
Trigger: GAGAAGCAGAGGTGTTGGCCAAGGACAGTGCCAAGC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCAGGCCTTGGCAAGCTTaGCACTGTCCTTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETRPWQA*HCPWPT
Trigger: TGTTGGCCAAGGACAGTGCCAAGCTTGCCAAGGCCT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATAGCGTGGCTTGCGTCTaGCTGGTGAGCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDSVACV*LVSLLA
Trigger: TGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCCCTCACTGCCAGCTaGCACAGTTCTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPALTAS*HSSRAG
Trigger: GCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCATGTAAACAGCAGGTaGGGGAGTGTGTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRHVNSR*GSVCRG
Trigger: TCCCCGGCACACACTCCCCCACCTGCTGTTTACATG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCGGGGAATGTCTGTATaGGCACACCTGTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETRGMSV*AHLWGS
Trigger: ACTACCCCACAGGTGTGCCCATACAGACATTCCCCG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGTGGTGCCGCAGGGCTaGTCTGGAAAGCGTCAATTA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVVVPQG*SGKRQL
Trigger: TAATTGACGCTTTCCAGACCAGCCCTGCGGCACCAC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCCAGACAGGACAGACTaGAATGGCAGCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRPDRTD*NGSQAC
Trigger: GCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGAATGCTGAGGAGTCCTaGGCAGAGGCCAGCATGCGG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLNAEES*AEASMR
Trigger: CCGCATGCTGGCCTCTGCCCAGGACTCCTCAGCATT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGTCCGGTCCACATGCTaGCCACCTACTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRVRSTC*PPTRCV
Trigger: GACACACCTAGTAGGTGGCCAGCATGTGGACCGGAC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCCACCCCATTCAACCTaGGGTCCTGGAGTGATGCAA +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETPPHST*GPGVMQ
Trigger: TTGCATCACTCCAGGACCCCAGGTTGAATGGGGTGG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CAA 72 bp GCCTCAGATTCTGCTGCTAAGAACCCTCCCGGGATCTaGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ASDSAAKNPPGI*HFLACWSPGCV
Trigger: GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTTAGCAGCAGAATCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCAGGGCATCTGCTCACTaGCCGAGCCCTGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPRASAH*PSPVGD
Trigger: GTCACCCACAGGGCTCGGTCAGTGAGCAGATGCCCT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGATGTCCTTCTCCAGTaGGATACGCGATTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVDVLLQ*DTRFPD
Trigger: ATCCGGGAATCGCGTATCTCACTGGAGAAGGACATC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCGATGTCCTTCTCCAGTaGGATACGCGATTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETDVLLQ*DTRFPD
Trigger: ATCCGGGAATCGCGTATCTCACTGGAGAAGGACATC...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCCCTGCTATCTGGAGTaGGTGGATGTAGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLPCYLE*VDVAPQ
Trigger: CTGGGGTGCTACATCCACTCACTCCAGATAGCAGGG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCTCGGACACTTGGCTGTaGGTTCGTCTCGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRSDTWL*VRLEPE
Trigger: TTCAGGCTCGAGACGAACTCACAGCCAAGTGTCCGA...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTGCGGCCAAGAGCCCTaGCTGAGCAGCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDCGQEP*LSSSNI
Trigger: GATGTTGGAGCTGCTCAGTCAGGGCTCTTGGCCGCA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCAGATCCTCATTATCCTaGACGGGGGTTGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVRSSLS*TGVGGT
Trigger: AGTCCCACCAACCCCCGTTCAGGATAATGAGGATCT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCTTCCACATTCTCTTTaGAGGGGCAGCGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLLPHSL*RGSAHC
Trigger: GCAGTGGGCGCTGCCCCTGCAAAGAGAATGTGGAAG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCAGGAACTTCTCTGGTaGTGTGAGCTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRQELLW*CELLLV
Trigger: GACGAGGAGGAGCTCACAGCACCAGAGAAGTTCCTG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGTCACTGACGGAGTCTaGCTTCCTCTGCAATGCCGC +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLVTDGV*LPLQCR
Trigger: GCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGAC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCAGCATCCTCTCCGCCTaGTTGGTCTTCTTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETSILSA*LVFFLV
Trigger: CACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTCGAAGCCCTGGATCTaGAGCTCCTGCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLSKPWI*SSCCWD
Trigger: ATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCACTAGGTGTGTCATATaGACACCCACAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRTRCVI*TPTARA
Trigger: GGCCCTGGCTGTGGGTGTGCATATGACACACCTAGT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCAAAGAAAGCCACTCTaGAAAGAGAAAAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHQRKPL*KEKRMG
Trigger: GCCCATTCTTTTCTCTTTGCAGAGTGGCTTTCTTTG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGGCCCGTGTAGCCAGTaGGACATGAACAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVGPCSQ*DMNKSP
Trigger: TGGAGATTTGTTCATGTCCCACTGGCTACACGGGCC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGTCGTACAGGCCGACTaGCCAGGGCAGGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRVVQAD*PGQGQG
Trigger: GCCCTGTCCCTGCCCTGGCCAGTCGGCCTGTACGAC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTGTCCAGTCTTGGGATaGCACTGGTCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLCPVLG*HWSSWE
Trigger: CTCCCAGGAGGACCAGTGCCATCCCAAGACTGGACA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCTGCACTGTCCAGTCTTaGGATGGCACTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRCTVQS*DGTGPP
Trigger: AGGAGGACCAGTGCCATCCCAAGACTGGACAGTGCA...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCAGTGGCTGCGATCTTaGTGGCGGTGTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDQWLRS*WRCLCG
Trigger: GCCACAGAGACACCGCCACCAAGATCGCAGCCACTG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATAGAGAAGCGCGTAGCTaGTGTTGGAGGCGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDREARS*CWRRAG
Trigger: CCCTGCTCGCCTCCAACACCAGCTACGCGCTTCTCT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGTCACTGTCGCAGCCTaGACAGATGAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLVTVAA*TDEEAW
Trigger: CCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGAC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCATGCCGCCTGGTCCTTaGGCCGGGGAAACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPMPPGP*AGETAA
Trigger: AGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCAT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCAGCGTGGCTTGCGTCTaGCTGGTGAGCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPSVACV*LVSLLA
Trigger: TGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAAGACTTGAACACGTGTaGGTCATACACACAGACATG +
Preference number: 4 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGRLEHV*VIHTDM
Trigger: CATGTCTGTGTGTATGACCCACACGTGTTCAAGTCT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCAATTAAAGGTCAACTaGGTTGCCGGGGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVQLKVN*VAGGTE
Trigger: CTCTGTGCCCCCGGCAACCCAGTTGACCTTTAATTG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCACGTTCAACGGAATTaGTCTGTGCTGCTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVHVQRN*SVLLPY
Trigger: GTAGGGCAGCAGCACAGACCAATTCCGTTGAACGTG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGATGACATGTACACCTaGGGCCATTATGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVDDMYT*GHYGGW
Trigger: CCATCCCCCATAATGGCCCCAGGTGTACATGTCATC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CAA 72 bp GTGGATGTAGCACCCCAGGGCATCTCATGTAACAACTaGCCCAACATCCAGAGGGTGTCCAGCACACAGGTG +
Preference number: 4 (lower is better)
Translates to: VDVAPQGISCNN*PNIQRVSSTQV
Trigger: CACCTGTGTGCTGGACACCCTCTGGATGTTGGGCAAGTTGTTACATGAGATGCCCTGGGGTGCTACATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCCTGGTGCAGCTTTGTaGGGGGTTCTGTTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLPGAAL*GVLFAV
Trigger: TACGGCAAACAGAACCCCTCACAAAGCTGCACCAGG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCAAGGAGTCTGTCACTaGCGGAGTCTGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLQGVCH*RSLPSS
Trigger: AGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCAGAATCGGCAGGGAGTaGCTATCCACACGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPRIGRE*LSTRGR
Trigger: TCGCCCCCGTGTGGATAGTCACTCCCTGCCGATTCT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCAGGGTAGGTACCTGTaGTCACACAACCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRQGRYL*SHNPSK
Trigger: TTTGCTGGGGTTGTGTGATCACAGGTACCTACCCTG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTGCGGCCAAGAGCCCTaGCTGAGCAGCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPCGQEP*LSSSNI
Trigger: GATGTTGGAGCTGCTCAGTCAGGGCTCTTGGCCGCA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAACCTCAGGAGGGGTTTaGGGCCTGCGGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRTSGGV*GLRPRA
Trigger: GGCTCTTGGCCGCAGGCCTCAAACCCCTCCTGAGGT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCACAGGGGGTCACAGTTaGCCACGGCATTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPTGGHS*PRHWGP
Trigger: TGGACCCCAATGCCGTGGGCAACTGTGACCCCCTGT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGTATCTGCGCCAACTTaGTGCACGGTGGCCAACACG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDVSAPT*CTVANT
Trigger: CGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATAC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGTGAGGGGTTCTGTTTaGCGTAGCGTCGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPVRGSV*RSVAWA
Trigger: TGCCCAGGCGACGCTACGGCAAACAGAACCCCTCAC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCTTGGCCAACACCTCTaGTTCTCTGCCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETLGQHL*FSALLL
Trigger: AAGAAGAAGGGCAGAGAAGCAGAGGTGTTGGCCAAG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATATCTGCAGCTCCTGCTaGTGGGATTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDICSSC*WDSCSS
Trigger: GCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGAT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATACGCACACTCAGTCCTaGTGGCAGGGAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDTHTQS*WQGRSH
Trigger: GTGGCTTCTTCCCTGCCAGCAGGACTGAGTGTGCGT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCCAATGCCGAGGCCTTaGCATCTGCTGGAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDPMPRP*HLLEEG
Trigger: ACCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCCCTCTTGCCTGGAATaGTTCCTTCTCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDPSCLE*FLLCLP
Trigger: GGGGAGGCAGAGAAGGAAGCATTCCAGGCAAGAGGG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCTGTTGTCCACCCTCTTaGCTGGAATGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVCCPPS*LECFLL
Trigger: GAGAAGGAAGCATTCCAGGCAAGAGGGTGGACAACA...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGTCACAGGGCTGGCATaGCATCCGCGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRVTGLA*HPRVPV
Trigger: CACTGGGACCCGCGGATGCCATGCCAGCCCTGTGAC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCAGGACGGACATTGCTaGCAGTGTGTGCCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPQDGHC*QCVPSA
Trigger: GGCAGACGGCACACACTGCCAGCAATGTCCGTCCTG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTGGCTGCGATCTTGGTaGCGGTGTCTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPWLRSW*RCLCGS
Trigger: GGAGCCACAGAGACACCGCCACCAAGATCGCAGCCA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCAACTTGCTGCACGGTaGCCAACACGCTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLQLAAR*PTRFPL
Trigger: AAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGCCTGGGCAGCAGTCTaGAGGGTTCGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRAWAAV*RVRAAS
Trigger: TGAGGCTGCCCGAACCCTCCAGACTGCTGCCCAGGC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATGTGTGCCGGGGATCTaGGCAGCCCTCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRCVPGI*AALTAS
Trigger: GCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCATGTCCAGGTGAACTaGGTACGCACACTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRHVQVN*VRTLSP
Trigger: AGGACTGAGTGTGCGTACCCAGTTCACCTGGACATG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCATTTCTTGGCCTGTTaGTCCCCTGGCTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLHFLAC*SPGCVE
Trigger: CTCGACACAGCCAGGGGACCAACAGGCCAAGAAATG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCTTGGGCCTGGCTCTTTaGATAGATCACAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETLGLAL*IDHRLK
Trigger: CTTCAGCCTGTGATCTATCCAAAGAGCCAGGCCCAA...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCTCCTCTCCGCCTGCTTaGTCTTCTTTCTCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETSSPPA*SSFSCL
Trigger: AAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGA...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355452.5
CDS-3UTR TCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGTAGCCAGTGGGACATaGACAAATCTCCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLVASGT*TNLHPG
Trigger: TCCTGGGTGGAGATTTGTTCATGTCCCACTGGCTAC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGGCCATGTGCTGCCATaGTGCAACTGTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDGHVLP*CNCLLQ
Trigger: CTGGAGAAGACAGTTGCATCATGGCAGCACATGGCC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCTGGACCGTAAGCTGCTaGCTGGATGGATTAGACTTG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRWTVSC*LDGLDL
Trigger: CAAGTCTAATCCATCCAGTCAGCAGCTTACGGTCCA...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAGCACACCTCTTCTCTaGACACCATCTCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRSTPLL*TPSPIR
Trigger: CCTAATGGGAGATGGTGTTCAGAGAAGAGGTGTGCT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACCTCGGAGCGGCCACTaGAGTTGCAGGGCAGACACT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRPRSGH*SCRADT
Trigger: AGTGTCTGCCCTGCAACTGCAGTGGCCGCTCCGAGG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACAGTCACCGTGGGCTTaGAGGCGCAGGTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRQSPWA*RRRCLC
Trigger: ACACAGGCACCTGCGCCTGCAAGCCCACGGTGACTG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGACAGCTGCAAGGCATaGATTTGTCTGCGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDDSCKA*ICLRVE
Trigger: CTCGACCCGCAGACAAATGCATGCCTTGCAGCTGTC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCAGTGTGTGCCGTCTaGCGTGAGGAAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDAVCAV*REEEVV
Trigger: GACAACTTCTTCCTCACGGCAGACGGCACACACTGC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATTCAGCCTCTGCAGCTaGTCCCGGGCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRFSLCS*SRAALT
Trigger: TGTCAAGGCCGCCCGGGAGCAGCTGCAGAGGCTGAA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGAGCATCCTCTCCGCCTaGTTGGTCTTCTTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLSILSA*LVFFLV
Trigger: CACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATCAGACGCCAGCACCTaGTGGGACGCCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRSDAST*WDACWS
Trigger: GCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACTGGGCAGCCCTCACTaGCAGCTGGCACAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRLGSPH*QLAQFS
Trigger: CGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGGGTGTGCCCGTTTATaGATGTGCAGGGGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDGCARL*MCRGES
Trigger: ACTCTCACCCCTGCACATGCATAAACGGGCACACCC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCACAGGTCAGGGAGCTaGTGTGAAACAGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPHRSGS*CETEGS
Trigger: GCTGCCCTCTGTTTCACAGCAGCTCCCTGACCTGTG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCCAGGAATGGGCCTTaGTCTAGCCAGACTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPARNGP*SSQTSR
Trigger: CCTGCTAGTCTGGCTAGAGCAAGGCCCATTCCTGGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGGGAGAGGGGAGGGATaGCAAGAGGAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPGRGEG*QEEMLR
Trigger: CCTCAGCATTTCCTCTTGGCATCCCTCCCCTCTCCC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTGGACGCGCACACCTTaGAGTGGCCATAGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDWTRTP*SGHSRN
Trigger: GTTTCTGCTATGGCCACTCCAAGGTGTGCGCGTCCA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGCTTTCTGGGCCGCCTaGACCTCCTGGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRAFWAA*TSWYLS
Trigger: GGACAGGTACCAGGAGGTCCAGGCGGCCCAGAAAGC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATGCCGTAGCGTCGCCTaGGCAGCAGTCTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRCRSVA*AAVWRV
Trigger: AACCCTCCAGACTGCTGCCCAGGCGACGCTACGGCA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTCCTCTCCGCCTGCTTaGTCTTCTTTCTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACLLQALDLSSPPA*SSFSCL
Trigger: CAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTCTGCCCTTCTTCTTaGCACTGGAGGAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLCPSS*HWRKEG
Trigger: CCCCTCTTTCCTCCAGTGCCAAGAAGAAGGGCAGAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCCCTCAGCAAGGCCTTaGCAAGCTTGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPPSARP*QAWHCP
Trigger: AGGACAGTGCCAAGCTTGCCAAGGCCTTGCTGAGGG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CCA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCTCTCACAACAGCTGTaGACTGTAATGTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LGALAVADPLDLCRSAETLSQQL*TVMCVD
Trigger: GTCCACACACATTACAGTCCACAGCTGTTGTGAGAG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACAGGCTTGCACACCCTaGTGGCCTCCCGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRQACTP*WPPAWQ
Trigger: TTGCCATGCGGGAGGCCACCAGGGTGTGCAAGCCTG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCATCTCCCATTAGGTTaGGGGGTGGCACCGGTCATC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPHLPLG*GVAPVI
Trigger: GATGACCGGTGCCACCCCCCAACCTAATGGGAGATG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CAA 72 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTaGCAAGCACTGGACCTGATGACATGTACACCTGGG +
Preference number: 4 (lower is better)
Translates to: EAGIRTESPACL*QALDLMTCTPG
Trigger: CCCAGGTGTACATGTCATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATAAATCGCTGAGGATGTaGTGCACCTGGAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDKSLRM*CTWNWA
Trigger: TGCCCAGTTCCAGGTGCATCACATCCTCAGCGATTT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR TCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCACTCATGTCCAGGTaGACTGGGTACGCACACTCA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPALMSR*TGYAHS
Trigger: TGAGTGTGCGTACCCAGTTCACCTGGACATGAGTGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCATGCATGTGCAGGGGTaGGAGTGTGCACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPMHVQG*ECALMS
Trigger: GGACATGAGTGCACACTCTCACCCCTGCACATGCAT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTCGGACACTTGGCTGTaGGTTCGTCTCGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPSDTWL*VRLEPE
Trigger: TTCAGGCTCGAGACGAACTCACAGCCAAGTGTCCGA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCATGCTGGTTACAGGTaGAGGGGACACAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPHAGYR*RGHSWH
Trigger: ATGCCAGCTGTGTCCCCTGCACCTGTAACCAGCATG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCGCGAGAATGGCAGCTaGATGCAGAATCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDRENGS*MQNLLF
Trigger: GAAGAGGAGATTCTGCATGCAGCTGCCATTCTCGCG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACAGCTCCTGTCTGCGTaGTTCAGACGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRQLLSA*FRRQHL
Trigger: CAGGTGCTGGCGTCTGAAGCACGCAGACAGGAGCTG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACCTCCAGCTCCTGTCTaGGTGCTTCAGACGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRPPAPV*VLQTPA
Trigger: TGCTGGCGTCTGAAGCACGCAGACAGGAGCTGGAGG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACGCGATTCCCGGATCTaGTGCTCCATCTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRRDSRI*CSISLS
Trigger: GCTGAGCGAGATGGAGCAGCAGATCCGGGAATCGCG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAAGACTGAGTTTCCTCTaGAAGGACCCCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRRLSFL*KDPGEP
Trigger: GGGCTCCCCGGGGTCCTTGCAGAGGAAACTCAGTCT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCTCATACACACAGACATaGACCCTCACGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVSYTQT*TLTCVC
Trigger: ACATACACACGTGAGGGTGCATGTCTGTGTGTATGA...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCACTAGGTGTGTCATATaGACACCCACAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPTRCVI*TPTARA
Trigger: GGCCCTGGCTGTGGGTGTGCATATGACACACCTAGT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCACGAGCTCGGCTTTTaGCACCTTCCTACCAACGTC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPHELGF*HLPTNV
Trigger: GACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACAGGTGCTCTCGTCCTaGCTGTGGAAGTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRQVLSS*LWKSVR
Trigger: CCTCACCGACTTCCACAGCCAGGACGAGAGCACCTG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTCCCAGGAACTTCTCTaGTGCTGTGAGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPSQELL*CCELLL
Trigger: GAGGAGGAGCTCACAGCACCAGAGAAGTTCCTGGGA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCCAGAGACGCGAGAATaGCAGCTGCATGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDPETRE*QLHAES
Trigger: AGATTCTGCATGCAGCTGCCATTCTCGCGTCTCTGG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCTCTGCCCTTCTTCTTaGCACTGGAGGAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPLCPSS*HWRKEG
Trigger: CCCCTCTTTCCTCCAGTGCCAAGAAGAAGGGCAGAG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCATGTCCAGGTGAACTaGGTACGCACACTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDHVQVN*VRTLSP
Trigger: AGGACTGAGTGTGCGTACCCAGTTCACCTGGACATG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCTCTCACAACAGCTGTaGACTGTAATGTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRLSQQL*TVMCVD
Trigger: GTCCACACACATTACAGTCCACAGCTGTTGTGAGAG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCAATTAAAGGTCAACTaGGTTGCCGGGGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDQLKVN*VAGGTE
Trigger: CTCTGTGCCCCCGGCAACCCAGTTGACCTTTAATTG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGCCGCAGGGCTGGTCTaGAAAGCGTCAATTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDAAGLV*KASIKG
Trigger: ACCTTTAATTGACGCTTTCCAGACCAGCCCTGCGGC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCCACCCCATTCAACCTaGGGTCCTGGAGTGATGCAA +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPPPHST*GPGVMQ
Trigger: TTGCATCACTCCAGGACCCCAGGTTGAATGGGGTGG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCAGGTGGAGGATGCAGTaGGCAGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPRWRMQ*AEIMPL
Trigger: CAGTGGCATGATCTCTGCCCACTGCATCCTCCACCT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCTTAAACCTGGGAGGTaGAGGATGCAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPLKPGR*RMQWAE
Trigger: CTCTGCCCACTGCATCCTCCACCTCCCAGGTTTAAG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATACGTGTGTATGTTATTaGCACTGGGGTGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDTCVCY*HWGVPV
Trigger: AACGGGCACACCCCAGTGTCAATAACATACACACGT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTTGGCCAACACCTCTaGTTCTCTGCCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLGQHL*FSALLL
Trigger: AAGAAGAAGGGCAGAGAAGCAGAGGTGTTGGCCAAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGATTCCCGGATCTGCTaGTCCATCTCGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRDSRIC*SISLSP
Trigger: TGGGCTGAGCGAGATGGAGCAGCAGATCCGGGAATC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGCCAGGAATGGGCCTTaGTCTAGCCAGACTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRARNGP*SSQTSR
Trigger: CCTGCTAGTCTGGCTAGAGCAAGGCCCATTCCTGGC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCTTTACGTGGTAAGTaGCTGAGAGGACAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPALRGK*LRGQGR
Trigger: CCTACCCTGTCCTCTCAGGCACTTACCACGTAAAGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCCAAAGAAAGCCACTCTaGAAAGAGAAAAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: KNPPGILHFLACWSPGCVQRKPL*KEKRMG
Trigger: GCCCATTCTTTTCTCTTTGCAGAGTGGCTTTCTTTG...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACTCCTCCTCGTCTTCTaGGCTCAGGAGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRLLLVF*AQEDPI
Trigger: AATGGGGTCCTCCTGAGCCCAGAAGACGAGGAGGAG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGTCACTGTCGCAGCCTaGACAGATGAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRVTVAA*TDEEAW
Trigger: CCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGAC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATGCAGCTCCTGCTGCTaGGATTCCTGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRCSSCC*DSCSSR
Trigger: TCTGCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATCACTCTCGAAGCCCTaGATCTGCAGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRSLSKP*ICSSCC
Trigger: GCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCGCAGGCTGTGCAGAATaGCCTCCAGGTTCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPAGCAE*PPGSVC
Trigger: ACAAACAGAACCTGGAGGCCATTCTGCACAGCCTGC...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAGACTTGAACACGTGTaGGTCATACACACAGACATG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRRLEHV*VIHTDM
Trigger: CATGTCTGTGTGTATGACCCACACGTGTTCAAGTCT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAAGCTGCTGACTGGATaGATTAGACTTGAACACGTG +
Preference number: 4 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRKLLTG*IRLEHV
Trigger: CACGTGTTCAAGTCTAATCCATCCAGTCAGCAGCTT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACATCTCCCATTAGGTTaGGGGGTGGCACCGGTCATC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRHLPLG*GVAPVI
Trigger: GATGACCGGTGCCACCCCCCAACCTAATGGGAGATG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR TCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACCTGGTGCAGCTTTGTaGGGGGTTCTGTTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRPGAAL*GVLFAV
Trigger: TACGGCAAACAGAACCCCTCACAAAGCTGCACCAGG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGCAGGGGTGAGAGTGTaGACTCATGTCCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRAGVRV*THVQVN
Trigger: GTTCACCTGGACATGAGTGCACACTCTCACCCCTGC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAAACGTCCGGTCCACATaGTGGCCACCTACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRNVRST*WPPTRC
Trigger: ACACCTAGTAGGTGGCCAGCATGTGGACCGGACGTT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
3UTR CAA 72 bp AAGCTGAGAAGCTGGAATCAGGACAGAGTCACCAGCTaGTCTCTTGCAAGCACTGGACCTGATGACATGTAC +
Preference number: 4 (lower is better)
Translates to: KLRSWNQDRVTS*SLASTGPDDMY
Trigger: GTACATGTCATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTCTCAGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATTGGGCCGGGGAAACTaGAGCTTCATTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRLGRGN*SFIPSR
Trigger: TCTGGAAGGAATGAAGCTGCAGTTTCCCCGGCCCAA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACATAGCAGAAACAGCTaGTGCAGCCAGCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRHSRNS*CSQLDC
Trigger: ACAATCCAGCTGGCTGCAGCAGCTGTTTCTGCTATG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR GCA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTCATACACACAGACATaGACCCTCACGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPSYTQT*TLTCVC
Trigger: ACATACACACGTGAGGGTGCATGTCTGTGTGTATGA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR GCA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATCATACACACAGACATaGACCCTCACGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRSYTQT*TLTCVC
Trigger: ACATACACACGTGAGGGTGCATGTCTGTGTGTATGA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 90 bp CCGCGCCCGCGGCGCCCACGTGGGGACAGAAGTCCTCGGGCGGGCTaGCGCACGTGTGCGAGGCCTGGGCGAGCCGCCCAAACGCCGCGT +
Preference number: 5 (lower is better)
Translates to: PRPRRPRGDRSPRAG*RTCARPGRAAQTPR
Trigger: ACGCGGCGTTTGGGCGGCTCGCCCAGGCCTCGCACACGTGCGGCAGCCCGCCCGAGGACTTCTGTCCCCACGTGGGCGCCGCGGGCGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp TGCGCCGTCATAGCACGCGCCCATGCCCGCGCCGGCCGCCCGCGGTaGCAGCAGCGCCAGCCCCAGCAGAAGCGCAGCCGCCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: CAVIARAHARAGRPR*QQRQPQQKRSRRHG
Trigger: ACCATGGCGGCGGCTGCGCTTCTGCTGGGGCTGGCGCTGCTGGCACCGCGGGCGGCCGGCGCGGGCATGGGCGCGTGCTATGACGGCGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp GCGCCCACGTGGGGACAGAAGTCCTCGGGCGGGCTGCCGCACGTGTaGGAGGCCTGGGCGAGCCGCCCAAACGCCGCGTTCTCGAACACC +
Preference number: 5 (lower is better)
Translates to: APTWGQKSSGGLPHV*EAWASRPNAAFSNT
Trigger: GGTGTTCGAGAACGCGGCGTTTGGGCGGCTCGCCCAGGCCTCGCACACGTGCGGCAGCCCGCCCGAGGACTTCTGTCCCCACGTGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp GGCCACTGCAGTTGCAGGGCAGACACTCGTGGGCAGCCTCGGCGGTaGCCCGGGCCCACGGGCGGTCCTGGAAGAAGGGCAGGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: GHCSCRADTRGQPRR*PGPTGGPGRRAGSA
Trigger: AGCGCTGCCTGCCCTTCTTCCAGGACCGCCCGTGGGCCCGGGGCACCGCCGAGGCTGCCCACGAGTGTCTGCCCTGCAACTGCAGTGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp AAGCCCTGGCCGGGCGGATGTGAGCCGGACCTCAGTCAGGAACACTaGACCGGCAGGGCTGGGGCCGGGACTGACGCGGAGGCGGAGGCT +
Preference number: 5 (lower is better)
Translates to: KPWPGGCEPDLSQEH*TGRAGAGTDAEAEA
Trigger: AGCCTCCGCCTCCGCGTCAGTCCCGGCCCCAGCCCTGCCGGTCCAGTGTTCCTGACTGAGGTCCGGCTCACATCCGCCCGGCCAGGGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp CCCTCGAAGCCAGGCCTGCACACGCATGTGCCGTTCTCGTGGCACTaGGCCGAGGCAGCGCCCAGTGGGGAGCACCTGCAGGCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: PSKPGLHTHVPFSWH*AEAAPSGEHLQARQ
Trigger: CTGCCGGGCCTGCAGGTGCTCCCCACTGGGCGCTGCCTCGGCCCAGTGCCACGAGAACGGCACATGCGTGTGCAGGCCTGGCTTCGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 90 bp TCTCCACCCAGGAGGCTGGCGGGGAAAGCCCTGGCCGGGCGGATGTaGGCCGGACCTCAGTCAGGAACACTGGACCGGCAGGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SPPRRLAGKALAGRM*AGPQSGTLDRQGWG
Trigger: GCCCCAGCCCTGCCGGTCCAGTGTTCCTGACTGAGGTCCGGCTCACATCCGCCCGGCCAGGGCTTTCCCCGCCAGCCTCCTGGGTGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 90 bp GGGCAAGCAGCGGATCCTCTCCTTGGGGGAGGTGCCCTGCTGGGCTaGGGCGGCGGGTCTGCCCCTGGCTGCCAGCCAAGAACCCAAGCC +
Preference number: 5 (lower is better)
Translates to: GQAADPLLGGGALLG*GGGSAPGCQPRTQA
Trigger: GGCTTGGGTTCTTGGCTGGCAGCCAGGGGCAGACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS GCA 90 bp GCCTGGAAAGGAAGGGCAAGCAGCGGATCCTCTCCTTGGGGGAGGTaGCCTGCTGGGCTGAGGCGGCGGGTCTGCCCCTGGCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: AWKGRASSGSSPWGR*PAGLRRRVCPWLPA
Trigger: GGCTGGCAGCCAGGGGCAGACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTTGCCCTTCCTTTCCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 90 bp GTACACACCACCTCCCGGCTCTCTGGGATGGTCGTACAGGCCGACTaGCCAGGGCAGGGACAGGGCTGGCAGTCGTCGGCTTGGCCCGCG +
Preference number: 5 (lower is better)
Translates to: VHTTSRLSGMVVQAD*PGQGQGWQSSAWPA
Trigger: CGCGGGCCAAGCCGACGACTGCCAGCCCTGTCCCTGCCCTGGCCAGTCGGCCTGTACGACCATCCCAGAGAGCCGGGAGGTGGTGTGTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp GACGCCAGCACCTGCTGGGACGCCTGTTGGAGCGTGGCTTGCGTCTaGCTGGTGAGCCTGCTGGCACGGCGGTGCGCCTGTTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: DASTCWDACWSVACV*LVSLLARRCACFRS
Trigger: GGAGCGGAAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 90 bp AGGAAGGGCAAGCAGCGGATCCTCTCCTTGGGGGAGGTGCCCTGCTaGGCTGAGGCGGCGGGTCTGCCCCTGGCTGCCAGCCAAGAACCC +
Preference number: 5 (lower is better)
Translates to: RKGKQRILSLGEVPC*AEAAGLPLAASQEP
Trigger: GGGTTCTTGGCTGGCAGCCAGGGGCAGACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTTGCCCTTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 90 bp GCACCTGCTGGGACGCCTGTTGGAGCGTGGCTTGCGTCTGGCTGGTaGGCCTGCTGGCACGGCGGTGCGCCTGTTTCCGCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: APAGTPVGAWLASGW*ACWHGGAPVSAPSA
Trigger: TGCTGAGGGAGCGGAAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp TGGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTGCTGGCACGGCGGTaGGCCTGTTTCCGCTCCCTCAGCAAGGCCTTGGCAAGCCCCGTG +
Preference number: 5 (lower is better)
Translates to: WSVACVWLVSLLARR*ACFRSLSKALASPV
Trigger: CACGGGGCTTGCCAAGGCCTTGCTGAGGGAGCGGAAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462567.1
CDS-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGCGGGCCCCGGACTGTaGTCCACCCTCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSAGPGL*STLLPG
Trigger: TCCAGGCAAGAGGGTGGACAACAGTCCGGGGCCCGC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 90 bp GATCCGGCCTGGGCACAGCGGGCACCCTTGTTCAGCCTCTGCAGCTaGTCCCGGGCGGCCTTGACAGCACCCTCGAGGCTCATCATCTGC +
Preference number: 5 (lower is better)
Translates to: DPAWAQRAPLFSLCS*SRAALTAPSRLIIC
Trigger: GCAGATGATGAGCCTCGAGGGTGCTGTCAAGGCCGCCCGGGAGCAGCTGCAGAGGCTGAACAAGGGTGCCCGCTGTGCCCAGGCCGGATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp TTCTGGGATCCGGCCTGGGCACAGCGGGCACCCTTGTTCAGCCTCTaGAGCTGCTCCCGGGCGGCCTTGACAGCACCCTCGAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: FWDPAWAQRAPLFSL*SCSRAALTAPSRLI
Trigger: GATGAGCCTCGAGGGTGCTGTCAAGGCCGCCCGGGAGCAGCTGCAGAGGCTGAACAAGGGTGCCCGCTGTGCCCAGGCCGGATCCCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp CGCGTAGCTGGTGTTGGAGGCGAGCAGGGCCCTCCAAGCAGTGGCTaGGATCTTGGTGGCGGTGTCTCTGTGGCTCCTGGCGAGGGCACG +
Preference number: 5 (lower is better)
Translates to: RVAGVGGEQGPPSSG*DLGGGVSVAPGEGT
Trigger: CGTGCCCTCGCCAGGAGCCACAGAGACACCGCCACCAAGATCGCAGCCACTGCTTGGAGGGCCCTGCTCGCCTCCAACACCAGCTACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp GCTTCAGACGCCAGCACCTGCTGGGACGCCTGTTGGAGCGTGGCTTaGGTCTGGCTGGTGAGCCTGCTGGCACGGCGGTGCGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ASDASTCWDACWSVA*VWLVSLLARRCACF
Trigger: GAAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp GAAAGGAAGGGCAAGCAGCGGATCCTCTCCTTGGGGGAGGTGCCCTaGTGGGCTGAGGCGGCGGGTCTGCCCCTGGCTGCCAGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: ERKGKQRILSLGEVP*WAEAAGLPLAASQE
Trigger: TTCTTGGCTGGCAGCCAGGGGCAGACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTTGCCCTTCCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 90 bp TCCTGTCTGCGTGCTTCAGACGCCAGCACCTGCTGGGACGCCTGTTaGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTGCTGGCACGGCGG +
Preference number: 5 (lower is better)
Translates to: SCLRASDASTCWDAC*SVACVWLVSLLARR
Trigger: CCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACGCAGACAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGTCTGTGCCGGTGGTGTaGTGCTGGCACCGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLSVPVV*CWHRQA
Trigger: GGCCTGCCGGTGCCAGCACAACACCACCGGCACAGA...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGCGGGCCCCGGACTGTaGTCCACCCTCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLAGPGL*STLLPG
Trigger: TCCAGGCAAGAGGGTGGACAACAGTCCGGGGCCCGC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 90 bp CTGTGTGGTCACGGCAGTGGTGACAGCGCCCGCCGTGGCCTGTGCTaGGGAAGAGCTCCCGATCAAACGTGCATTCCTCGGAGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: LCGHGSGDSARRGLC*GRAPDQTCIPRSGH
Trigger: GTGGCCGCTCCGAGGAATGCACGTTTGATCGGGAGCTCTTCCGCAGCACAGGCCACGGCGGGCGCTGTCACCACTGCCGTGACCACACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp CAGCTGTGTGGTCACGGCAGTGGTGACAGCGCCCGCCGTGGCCTGTaGTGCGGAAGAGCTCCCGATCAAACGTGCATTCCTCGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: QLCGHGSGDSARRGL*CGRAPDQTCIPRSG
Trigger: GCCGCTCCGAGGAATGCACGTTTGATCGGGAGCTCTTCCGCAGCACAGGCCACGGCGGGCGCTGTCACCACTGCCGTGACCACACAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp TGGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTGCTGGCACGGCGGTaGGCCTGTTTCCGCTCCCTCAGCAAGGCCTTGGCAAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: WSVACVWLVSLLARR*ACFRSLSKALASLA
Trigger: TGCCAAGCTTGCCAAGGCCTTGCTGAGGGAGCGGAAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678544.1
CDS GCA 90 bp ACAGCAGGTGGGGGAGTGTGTGCCGGGGATCTGGGCAGCCCTCACTaGCAGCTGGCACAGTTCTCGGGCAGGCTGTGCAGAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TAGGGVCAGDLGSPH*QLAQFSGRLCRMAS
Trigger: GGAGGCCATTCTGCACAGCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACACTCCCCCACCTGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp TGGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTGCTGGCACGGCGGTaGGCCTGTTTCCGCTCCCTCAGCAAGGCCTTGGCAAGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: WSVACVWLVSLLARR*ACFRSLSKALASSA
Trigger: AGCAGAGCTTGCCAAGGCCTTGCTGAGGGAGCGGAAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS CCA 90 bp TGGTGGCGGTGTCTCTGTGGCTCCTGGCGAGGGCACGGGCCTCTGTaGCCAGGTGGCTCCATTTGGTCGGCTGACTGGGACCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: WWRCLCGSWRGHGPL*PGGSIWSADWDLPE
Trigger: CTCAGGAAGGTCCCAGTCAGCCGACCAAATGGAGCCACCTGGCCACAGAGGCCCGTGCCCTCGCCAGGAGCCACAGAGACACCGCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp TCCGCTTCAGGCAGCACCTCTGCCACAGCCGTCCTCAGTGCTTTCTaGGCCGCCTGGACCTCCTGGTACCTGTCCTCCAGGTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SASGSTSATAVLSAF*AAWTSWYLSSRSRW
Trigger: CCAGCGGGACCTGGAGGACAGGTACCAGGAGGTCCAGGCGGCCCAGAAAGCACTGAGGACGGCTGTGGCAGAGGTGCTGCCTGAAGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACCTGGCAGTCGTCGGCTaGGCCCGCGAAAGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHLAVVG*ARERVA
Trigger: GGCAACCCTTTCGCGGGCCAAGCCGACGACTGCCAG...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCTGCAAGGCATGCATTaGTCTGCGGGTCGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSLQGMH*SAGRGA
Trigger: GGCCCCTCGACCCGCAGACAAATGCATGCCTTGCAG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATGCTCCCGGGCGGCCTaGACAGCACCCTCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGCSRAA*TAPSRL
Trigger: GAGCCTCGAGGGTGCTGTCAAGGCCGCCCGGGAGCA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGGCACAGCGGGCACCCTaGTTCAGCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGAQRAP*FSLCSC
Trigger: GCAGCTGCAGAGGCTGAACAAGGGTGCCCGCTGTGC...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGCAGTGGCTGCGATCTaGGTGGCGGTGTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSAVAAI*VAVSLW
Trigger: CCACAGAGACACCGCCACCAAGATCGCAGCCACTGC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGGCCTGGGCTGGGGCTaGATGGGTGTCCAGCGACCC +
Preference number: 5 (lower is better)
Translates to: GTGPATSSAFATFLPTSGGLGWG*MGVQRP
Trigger: GGGTCGCTGGACACCCATCAAGCCCCAGCCCAGGCC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCACCTCAGGAGGGGTTaGAGGCCTGCGGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLHLRRG*RPAAKS
Trigger: GCTCTTGGCCGCAGGCCTCAAACCCCTCCTGAGGTG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCACCTCAGGAGGGGTTaGAGGCCTGCGGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGHLRRG*RPAAKS
Trigger: GCTCTTGGCCGCAGGCCTCAAACCCCTCCTGAGGTG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 90 bp AGCGCCCGCCGTGGCCTGTGCTGCGGAAGAGCTCCCGATCAAACGTaGATTCCTCGGAGCGGCCACTGCAGTTGCAGGGCAGACACTCGT +
Preference number: 5 (lower is better)
Translates to: SARRGLCCGRAPDQT*IPRSGHCSCRADTR
Trigger: ACGAGTGTCTGCCCTGCAACTGCAGTGGCCGCTCCGAGGAATGCACGTTTGATCGGGAGCTCTTCCGCAGCACAGGCCACGGCGGGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp AGCGGTCACACTTCCAGCCAGTCACCGTGGGCTTGCAGGCGCAGGTaGCTGTGTCATCGCACTGGAGGTGTAGGGAGCCTGCCGACTGGC +
Preference number: 5 (lower is better)
Translates to: SGHTSSQSPWACRRR*LCHRTGGVGSLPTG
Trigger: GCCAGTCGGCAGGCTCCCTACACCTCCAGTGCGATGACACAGGCACCTGCGCCTGCAAGCCCACGGTGACTGGCTGGAAGTGTGACCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp TCGGAGGTCTCCTGCAGGTGGAACCTGAGCTCTACCTCCCTGGGATaGCCGGCATCCTGGGGGCCAGACAGGCTAGAGTGCCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SEVSCRWNLSSTSLG*PASWGPDRLECLRD
Trigger: GTCCCTGAGGCACTCTAGCCTGTCTGGCCCCCAGGATGCCGGGCATCCCAGGGAGGTAGAGCTCAGGTTCCACCTGCAGGAGACCTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp TGCAGGTGGAACCTGAGCTCTACCTCCCTGGGATGCCCGGCATCCTaGGGGCCAGACAGGCTAGAGTGCCTCAGGGACAGGGCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: CRWNLSSTSLGCPAS*GPDRLECLRDRAKP
Trigger: AGGCTTGGCCCTGTCCCTGAGGCACTCTAGCCTGTCTGGCCCCCAGGATGCCGGGCATCCCAGGGAGGTAGAGCTCAGGTTCCACCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp GCTTCCTCCAGCTCCTGTCTGCGTGCTTCAGACGCCAGCACCTGCTaGGACGCCTGTTGGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: ASSSSCLRASDASTC*DACWSVACVWLVSL
Trigger: CAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACGCAGACAGGAGCTGGAGGAAGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 90 bp GTGGGGGAGTGTGTGCCGGGGATCTGGGCAGCCCTCACTGCCAGCTaGCACAGTTCTCGGGCAGGCTGTGCAGAATGGCCTCCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: VGECVPGIWAALTAS*HSSRAGCAEWPPGS
Trigger: AGAACCTGGAGGCCATTCTGCACAGCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACACTCCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCTCCCTCAGCAAGGCCTaGGCAAGCTTGGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSSLSKA*ASLALS
Trigger: GGACAGTGCCAAGCTTGCCAAGGCCTTGCTGAGGGA...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCCTCCAGGTTCTGTTaGTCGGCGCGGATCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHASRFC*SARISA
Trigger: CGCCGAGATCCGCGCCGACAAACAGAACCTGGAGGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCCCAATGCCGAGGCCTaGCCATCTGCTGGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGPNAEA*PSAGRG
Trigger: CCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGGG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCCCAATGCCGAGGCCTaGCCATCTGCTGGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLPNAEA*PSAGRG
Trigger: CCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGGG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS TCA 90 bp TCCAGGGCCTTCGCCTTCAGGCCCAGGTCTTCAGCCCGGGACTTCTaGGGCTGCAGGGAGACAATGCGCTCAGGCAGGGCCTGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SRAFAFRPRSSARDF*GCRETMRSGRAWKG
Trigger: TCCTTTCCAGGCCCTGCCTGAGCGCATTGTCTCCCTGCAGCCTCAGAAGTCCCGGGCTGAAGACCTGGGCCTGAAGGCGAAGGCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 90 bp CAGAGTCCTGGCTCCCATGACAGTCACTGTCGCAGCCTGGACAGATaGGGAAGCCTGGGTCAGGGCGGCTCTGGCCTCCTGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: QSPGSHDSHCRSLDR*GSLGQGGSGLLVQL
Trigger: CAGCTGCACCAGGAGGCCAGAGCCGCCCTGACCCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679272.1
CDS GCA 90 bp GGCAGGGACAGGGCTGGCAGTCGTCGGCTTGGCCCGCGAAAGGGTTaGCATAGAAACCTGGCAAACAGCGTTCACAGGATGGGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: GRDRAGSRRLGPRKG*HRNLANSVHRMGPR
Trigger: CCGAGGGCCCATCCTGTGAACGCTGTTTGCCAGGTTTCTATGGCAACCCTTTCGCGGGCCAAGCCGACGACTGCCAGCCCTGTCCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp CACGCTTTCCGCTTCAGGCAGCACCTCTGCCACAGCCGTCCTCAGTaGTTTCTGGGCCGCCTGGACCTCCTGGTACCTGTCCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: HAFRFRQHLCHSRPQ*FLGRLDLLVPVLQV
Trigger: GACCTGGAGGACAGGTACCAGGAGGTCCAGGCGGCCCAGAAAGCACTGAGGACGGCTGTGGCAGAGGTGCTGCCTGAAGCGGAAAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp TTGCTGCACGGTGGCCAACACGCTTTCCGCTTCAGGCAGCACCTCTaGCACAGCCGTCCTCAGTGCTTTCTGGGCCGCCTGGACCTCCTG +
Preference number: 5 (lower is better)
Translates to: LLHGGQHAFRFRQHL*HSRPQCFLGRLDLL
Trigger: CAGGAGGTCCAGGCGGCCCAGAAAGCACTGAGGACGGCTGTGGCAGAGGTGCTGCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp TCAGCTTCCTCCAGCTCCTGTCTGCGTGCTTCAGACGCCAGCACCTaGTGGGACGCCTGTTGGAGCGTGGCTTGCGTCTGGCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SASSSSCLRASDAST*WDACWSVACVWLVS
Trigger: GCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACGCAGACAGGAGCTGGAGGAAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp GGCCCAGGTCTTCAGCCCGGGACTTCTGAGGCTGCAGGGAGACAATaGGCTCAGGCAGGGCCTGGAAAGGAAGGGCAAGCAGCGGATCCT +
Preference number: 5 (lower is better)
Translates to: GPGLQPGTSEAAGRQ*AQAGPGKEGQAADP
Trigger: AGGATCCGCTGCTTGCCCTTCCTTTCCAGGCCCTGCCTGAGCGCATTGTCTCCCTGCAGCCTCAGAAGTCCCGGGCTGAAGACCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 90 bp GCAAGGCCAGGTACGGGGCTGTATCTGCGCCAACTTGCTGCACGGTaGCCAACACGCTTTCCGCTTCAGGCAGCACCTCTGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: ARPGTGLYLRQLAAR*PTRFPLQAAPLPQP
Trigger: CGGCTGTGGCAGAGGTGCTGCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp TCAGCCAGCAGAGTCCTGGCTCCCATGACAGTCACTGTCGCAGCCTaGACAGATGAGGAAGCCTGGGTCAGGGCGGCTCTGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SASRVLAPMTVTVAA*TDEEAWVRAALASW
Trigger: CCAGGAGGCCAGAGCCGCCCTGACCCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTGCTGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
ENST00000679272.1
CDS CCA 90 bp GCCCTCACTGCCAGCTGGCACAGTTCTCGGGCAGGCTGTGCAGAATaGCCTCCAGGTTCTGTTTGTCGGCGCGGATCTCGGCGAGGTCAC +
Preference number: 5 (lower is better)
Translates to: ALTASWHSSRAGCAE*PPGSVCRRGSRRGH
Trigger: GTGACCTCGCCGAGATCCGCGCCGACAAACAGAACCTGGAGGCCATTCTGCACAGCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 90 bp CCTGGGTCATGTAAACAGCAGGTGGGGGAGTGTGTGCCGGGGATCTaGGCAGCCCTCACTGCCAGCTGGCACAGTTCTCGGGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PGSCKQQVGECVPGI*AALTASWHSSRAGC
Trigger: ACAGCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACACTCCCCCACCTGCTGTTTACATGACCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGCATGCCCGTTGCACTaGCACCTGCCGCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHACPLH*HLPPTE
Trigger: CTCTGTGGGCGGCAGGTGCAAGTGCAACGGGCATGC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCCTGCAGCCAGCTGGATaGTGGGGCTGCAGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSLQPAG*WGCRLK
Trigger: CTTTAACCTGCAGCCCCACAATCCAGCTGGCTGCAG...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGCAGGCCCGGCAGCCCTaGATGGAGAAGCCGAAGAAA +
Preference number: 5 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLQARQP*MEKPKK
Trigger: TTTCTTCGGCTTCTCCATCAAGGGCTGCCGGGCCTG...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGAGTCTGGCCTTCAGCTaGGCTGCCTCCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGSLAFS*AASSFT
Trigger: GGTGAAGGAGGAGGCAGCCAAGCTGAAGGCCAGACT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTAATGCCGCCTGGTCCTaGGGCCGGGGAAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: GTGPATSSAFATFLPTSGNAAWS*GRGNCS
Trigger: GCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTCCCTCAGCAAGGCCTaGGCAAGCTTGGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLSLSKA*ASLALS
Trigger: GGACAGTGCCAAGCTTGCCAAGGCCTTGCTGAGGGA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTGCCTCCAGGTTCTGTTaGTCGGCGCGGATCTCGGCG +
Preference number: 5 (lower is better)
Translates to: GTGPATSSAFATFLPTSGASRFC*SARISA
Trigger: CGCCGAGATCCGCGCCGACAAACAGAACCTGGAGGC...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCGCATTTCTTGGCCTGTaGGTCCCCTGGCTGTGTCGA +
Preference number: 5 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSAFLGL*VPWLCR
Trigger: TCGACACAGCCAGGGGACCAACAGGCCAAGAAATGC...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCACCTCAGGAGGGGTTaGAGGCCTGCGGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: GTGPATSSAFATFLPTSGHLRRG*RPAAKS
Trigger: GCTCTTGGCCGCAGGCCTCAAACCCCTCCTGAGGTG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS TCA 90 bp CAGAGTCCTGGCTCCCATGACAGTCACTGTCGCAGCCTGGACAGATaGGGAAGCCTGGGTCAGGGCGGCTCTGGCCTCCTGGTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: QSPGSHDSHCRSLDR*GSLGQGGSGLLVQL
Trigger: AAGCTGCACCAGGAGGCCAGAGCCGCCCTGACCCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp AGGCTGGAGGTCGAAGAAGCCAGGGTAGCAGCGGCTGCAGTCCCGTaGAGTCACATGAGGCAGGCAGGAGCATTGGCCTGTCACTGGGTC +
Preference number: 5 (lower is better)
Translates to: RLEVEEARVAAAAVP*SHMRQAGALACHWV
Trigger: GACCCAGTGACAGGCCAATGCTCCTGCCTGCCTCATGTGACTGCACGGGACTGCAGCCGCTGCTACCCTGGCTTCTTCGACCTCCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp GAAGCCAGCAAGGCCAGGTACGGGGCTGTATCTGCGCCAACTTGCTaGACGGTGGCCAACACGCTTTCCGCTTCAGGCAGCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: EASKARYGAVSAPTC*TVANTLSASGSTSA
Trigger: GGCAGAGGTGCTGCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTTGCTGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp GGGGAAGCCAGCAAGGCCAGGTACGGGGCTGTATCTGCGCCAACTTaGTGCACGGTGGCCAACACGCTTTCCGCTTCAGGCAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: GEASKARYGAVSAPT*CTVANTLSASGSTS
Trigger: AGAGGTGCTGCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTTGCTGGCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp AGTGGAACCCGGGCAGACAGCGGTCACACTTCCAGCCAGTCACCGTaGGCTTGCAGGCGCAGGTGCCTGTGTCATCGCACTGGAGGTGTA +
Preference number: 5 (lower is better)
Translates to: SGTRADSGHTSSQSP*ACRRRCLCHRTGGV
Trigger: TACACCTCCAGTGCGATGACACAGGCACCTGCGCCTGCAAGCCCACGGTGACTGGCTGGAAGTGTGACCGCTGTCTGCCCGGGTTCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp GTCCCGTGCAGTCACATGAGGCAGGCAGGAGCATTGGCCTGTCACTaGGTCGCAGGGCATCTGCTCACTGACCGAGCCCTGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: VPCSHMRQAGALACH*VAGHLLTDRALWVT
Trigger: TGTCACCCACAGGGCTCGGTCAGTGAGCAGATGCCCTGCGACCCAGTGACAGGCCAATGCTCCTGCCTGCCTCATGTGACTGCACGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp GGGCACGGGCCTCTGTGGCCAGGTGGCTCCATTTGGTCGGCTGACTaGGACCTTCCTGAGGAATCTCCAGAGACGCGAGAATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GHGPLWPGGSIWSAD*DLPEESPETREWQL
Trigger: CAGCTGCCATTCTCGCGTCTCTGGAGATTCCTCAGGAAGGTCCCAGTCAGCCGACCAAATGGAGCCACCTGGCCACAGAGGCCCGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp CCACCCTTCCCTCCAGCAGATTCCAGAGAAGCGCGTAGCTGGTGTTaGAGGCGAGCAGGGCCCTCCAAGCAGTGGCTGCGATCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: PPFPPADSREARSWC*RRAGPSKQWLRSWW
Trigger: CCACCAAGATCGCAGCCACTGCTTGGAGGGCCCTGCTCGCCTCCAACACCAGCTACGCGCTTCTCTGGAATCTGCTGGAGGGAAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGACACAGATCCCTGTGTaGGGGTCACAGGTGCCATGC +
Preference number: 5 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGTQIPV*GSQVPC
Trigger: GCATGGCACCTGTGACCCCAACACAGGGATCTGTGT...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCAGTTGCCCACGGCATaGGGGTCCACGTTCCCGCTA +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHQLPTA*GSTFPL
Trigger: TAGCGGGAACGTGGACCCCAATGCCGTGGGCAACTG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGGCATTTCTTGGCCTGTaGGTCCCCTGGCTGTGTCGA +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLAFLGL*VPWLCR
Trigger: TCGACACAGCCAGGGGACCAACAGGCCAAGAAATGC...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCCCAATGCCGAGGCCTaGCCATCTGCTGGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHPNAEA*PSAGRG
Trigger: CCCTCTTCCAGCAGATGGCAAGGCCTCGGCATTGGG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS TCA 90 bp CGGAGCACAGGATTCACAGAACTGGCCCGTGTAGCCAGTGGGACATaGACAAATCTCCACCCAGGAGGCTGGCGGGGAAAGCCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: RSTGFTELARVASGT*TNLHPGGWRGKPWP
Trigger: CGGCCAGGGCTTTCCCCGCCAGCCTCCTGGGTGGAGATTTGTTCATGTCCCACTGGCTACACGGGCCAGTTCTGTGAATCCTGTGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGTGGAGAAGGCCACGTaGCCGCCACTCAGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: KNPPGILHFLACWSPGCVVEKAT*PPLSGE
Trigger: CTCCCCGCTGAGTGGCGGCAACGTGGCCTTCTCCAC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACGCCGTGAGGAAGAAGTaGTCGTGGCAGCGGTCACAT +
Preference number: 5 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHAVRKK*SWQRSH
Trigger: ATGTGACCGCTGCCACGACAACTTCTTCCTCACGGC...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp CAGAGGCCAGCATGCGGGCCTGGCCACAGGGCGATTCCCAGACAGGACAGACTGTCTCTGCCCTTCTTCTaGGCACTGGAGGAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: QRPACGPGHRAIPRQDRLSLPFF*ALEERG
Trigger: CCCTCTTTCCTCCAGTGCCAAGAAGAAGGGCAGAGA...CAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCCAGGCCCGCATGCTGGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGTCTCTGCCCTTCTTCTaGGCACTGGAGGAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLSLPFF*ALEERG
Trigger: CCCTCTTTCCTCCAGTGCCAAGAAGAAGGGCAGAGA...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGCTTGGCACTGTCCTaGGCCAACACCTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLSLALS*ANTSAS
Trigger: AGAAGCAGAGGTGTTGGCCAAGGACAGTGCCAAGCT...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CAA 90 bp CAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGAGAGGGCTGTTGCTGACCCCCTaGATCTCTGCAGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGGPFPQGIWCSPRTLRGLLLTP*ISADLL
Trigger: CAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAG...CCCTCTCAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCTGGGACTAGGGGCTTaGGCTGTTGCTGACCCCCTT +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHLGLGA*AVADPL
Trigger: AAGGGGGTCAGCAACAGCCAAAGCCCCTAGTCCCAG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS TCA 90 bp GGCAGGAGCATTGGCCTGTCACTGGGTCGCAGGGCATCTGCTCACTaGCCGAGCCCTGTGGGTGACAGCTGCAAGGCATGCATTTGTCTG +
Preference number: 5 (lower is better)
Translates to: GRSIGLSLGRRASAH*PSPVGDSCKACICL
Trigger: CAGACAAATGCATGCCTTGCAGCTGTCACCCACAGGGCTCGGTCAGTGAGCAGATGCCCTGCGACCCAGTGACAGGCCAATGCTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 90 bp ACCCGGCTGAGGCTTCCAGATCAGCCAGCAGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCTGGACAGATGAGGAAGCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: TRLRLPDQPAESWLP*QSLSQPGQMRKPGS
Trigger: TGACCCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTGCTGGCTGATCTGGAAGCCTCAGCCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS GCA 90 bp GTCTCGATGTCCTTCTCCAGTGAGATACGCGATTCCCGGATCTGCTaGTCCATCTCGCTCAGCCCAGCACCCACCCGCTCAGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VSMSFSSEIRDSRIC*SISLSPAPTRSASS
Trigger: GGAGGAAGCTGAGCGGGTGGGTGCTGGGCTGAGCGAGATGGAGCAGCAGATCCGGGAATCGCGTATCTCACTGGAGAAGGACATCGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp TCTGCCTTCCTCTGCAATGCCGCCTGGTCCTTGGGCCGGGGAAACTaGAGCTTCATTCCTGCAAACCCGGCTGAGGCTTCCAGATCAGCC +
Preference number: 5 (lower is better)
Translates to: SAFLCNAAWSLGRGN*SFIPANPAEASRSA
Trigger: GGCTGATCTGGAAGCCTCAGCCGGGTTTGCAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS CCA 90 bp TTCTGTTTGTCGGCGCGGATCTCGGCGAGGTCACTCTCGAAGCCCTaGATCTGCAGCTCCTGCTGCTGGGATTCCTGCTCCAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: FCLSARISARSLSKP*ICSSCCWDSCSSRL
Trigger: CAGTCTGCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGACCTCGCCGAGATCCGCGCCGACAAACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGAGCGGCCACTGCAGTaGCAGGGCAGACACTCGTGG +
Preference number: 5 (lower is better)
Translates to: KNPPGILHFLACWSPGCVERPLQ*QGRHSW
Trigger: CCACGAGTGTCTGCCCTGCAACTGCAGTGGCCGCTC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGCCTCCAGGTTCTGTTaGTCGGCGCGGATCTCGGCG +
Preference number: 5 (lower is better)
Translates to: KNPPGILHFLACWSPGCVASRFC*SARISA
Trigger: CGCCGAGATCCGCGCCGACAAACAGAACCTGGAGGC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp ACAGGCCAGGGTGGGCCATTCCCTCAGGGCATCTGGTGCAGTCCCAGGACCCTGCACGTGTGTATGTTATaGACACTGGGGTGTGCCCGT +
Preference number: 5 (lower is better)
Translates to: TGQGGPFPQGIWCSPRTLHVCML*TLGCAR
Trigger: ACGGGCACACCCCAGTGTCAATAACATACACACGTG...CAGGGTCCTGGGACTGCACCAGATGCCCTGAGGGAATGGCCCACCCTGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAGGGATCTTGCATTTCTaGGCCTGTTGGTCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGGILHF*ACWSPG
Trigger: GCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCC...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGATCCCTCAGCAAGGCCTaGGCAAGCTCTGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGSLSKA*ASSASL
Trigger: CAGAGAAGCAGAGCTTGCCAAGGCCTTGCTGAGGGA...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS TCA 90 bp GGGCGTAGCAGGACGGACATTGCTGGCAGTGTGTGCCGTCTGCCGTaGGGAAGAAGTTGTCGTGGCAGCGGTCACATTTGTAGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: GRSRTDIAGSVCRLP*GRSCRGSGHICSPR
Trigger: TCGAGGGCTACAAATGTGACCGCTGCCACGACAACTTCTTCCTCACGGCAGACGGCACACACTGCCAGCAATGTCCGTCCTGCTACGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 90 bp CCGCCTGCTTGGTCTTCTTTCTCGTGTCTGCAAGGAGTCTGTCACTaGCGGAGTCTGCCTTCCTCTGCAATGCCGCCTGGTCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: PPAWSSFSCLQGVCH*RSLPSSAMPPGPWA
Trigger: GGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTGCAGACACGAGAAAGAAGACCAAGCAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp CACCAGGGCGTAGCAGGACGGACATTGCTGGCAGTGTGTGCCGTCTaGCGTGAGGAAGAAGTTGTCGTGGCAGCGGTCACATTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: HQGVAGRTLLAVCAV*REEEVVVAAVTFVA
Trigger: GGCTACAAATGTGACCGCTGCCACGACAACTTCTTCCTCACGGCAGACGGCACACACTGCCAGCAATGTCCGTCCTGCTACGCCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 90 bp CAGCAAGGCCTTGGCAAGCTTGGCACTGTCCTTGGCCAACACCTCTaGTTCTCTGCCCTTCTTCTTGGCACTGGAGGAAAGAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: QQGLGKLGTVLGQHL*FSALLLGTGGKRGR
Trigger: GCGGCCCCTCTTTCCTCCAGTGCCAAGAAGAAGGGCAGAGAAGCAGAGGTGTTGGCCAAGGACAGTGCCAAGCTTGCCAAGGCCTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678544.1
CDS GCA 90 bp AAGGTCTCGATGTCCTTCTCCAGTGAGATACGCGATTCCCGGATCTaGTGCTCCATCTCGCTCAGCCCAGCACCCACCCGCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: KVSMSFSSEIRDSRI*CSISLSPAPTRSAS
Trigger: GGAAGCTGAGCGGGTGGGTGCTGGGCTGAGCGAGATGGAGCAGCAGATCCGGGAATCGCGTATCTCACTGGAGAAGGACATCGAGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp CGGATCTCGGCGAGGTCACTCTCGAAGCCCTGGATCTGCAGCTCCTaGTGCTGGGATTCCTGCTCCAGCAGACTGAGTTTCCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RISARSLSKPWICSS*CWDSCSSRLSFLCK
Trigger: CTTGCAGAGGAAACTCAGTCTGCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGACCTCGCCGAGATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp GTCTGCAAGGAGTCTGTCACTGACGGAGTCTGCCTTCCTCTGCAATaGCGCCTGGTCCTTGGGCCGGGGAAACTGCAGCTTCATTCCTGC +
Preference number: 5 (lower is better)
Translates to: VCKESVTDGVCLPLQ*RLVLGPGKLQLHSC
Trigger: GCAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS GCA 90 bp TCCAGCCTTGGTGACAGAGTAAGAGTCTTTGTGAGGGGTTCTGTTTaGCGTAGCGTCGCCTGGGCAGCAGTCTGGAGGGTTCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSLGDRVRVFVRGSV*RSVAWAAVWRVRAA
Trigger: GGCTGCCCGAACCCTCCAGACTGCTGCCCAGGCGACGCTACGGCAAACAGAACCCCTCACAAAGACTCTTACTCTGTCACCAAGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679272.1
CDS CCA 90 bp AGCAGAATGTCTAGTGGTCCCCAGGGACTGCCACAGTCGGACCCTTaGAGCCACCCCTCCGTCAAAGTCAGTCTGGCCTTCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SRMSSGPQGLPQSDP*SHPSVKVSLAFSLA
Trigger: AGCCAAGCTGAAGGCCAGACTGACTTTGACGGAGGGGTGGCTCCAAGGGTCCGACTGTGGCAGTCCCTGGGGACCACTAGACATTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp AGGAGTCTGTCACTGACGGAGTCTGCCTTCCTCTGCAATGCCGCCTaGTCCTTGGGCCGGGGAAACTGCAGCTTCATTCCTGCAAACCCG +
Preference number: 5 (lower is better)
Translates to: RSLSLTESAFLCNAA*SLGRGNCSFIPANP
Trigger: CGGGTTTGCAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS-3UTR CAA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCAGGCGGAGGGTGATGTaGACCGAGGTGGGGTACTGC +
Preference number: 5 (lower is better)
Translates to: LGALAVADPLDLCRSAETRRRVM*TEVGYC
Trigger: GCAGTACCCCACCTCGGTCAACATCACCCTCCGCCT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCAGGCTGCCAGCGGGATaGCAAGTGCAGGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KNPPGILHFLACWSPGCVRLPAG*QVQGLQ
Trigger: CTGCAGACCCTGCACTTGCAATCCCGCTGGCAGCCT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAATGCCGCCTGGTCCTaGGGCCGGGGAAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRNAAWS*GRGNCS
Trigger: GCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCTGCTGGGACGCCTGTaGGAGCGTGGCTTGCGTCTG +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRLLGRL*ERGLRL
Trigger: CAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACAACCCTCCCGGGATCTaGCATTTCTTGGCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHNPPGI*HFLACW
Trigger: CCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTT...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACCCACGTTCAACGGAATaGGTCTGTGCTGCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHPRSTE*VCAAAL
Trigger: TAGGGCAGCAGCACAGACCAATTCCGTTGAACGTGG...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGAACCATCCTCGGACACTaGGCTGTGAGTTCGTCTCGA +
Preference number: 5 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGTILGH*AVSSSR
Trigger: TCGAGACGAACTCACAGCCAAGTGTCCGAGGATGGT...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTACCATCCTCGGACACTaGGCTGTGAGTTCGTCTCGA +
Preference number: 5 (lower is better)
Translates to: GTGPATSSAFATFLPTSGTILGH*AVSSSR
Trigger: TCGAGACGAACTCACAGCCAAGTGTCCGAGGATGGT...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCGGGCCCCGGACTGTaGTCCACCCTCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: EAGIRTESPACLLQALDLAGPGL*STLLPG
Trigger: TCCAGGCAAGAGGGTGGACAACAGTCCGGGGCCCGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp CTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCCACTCACCAGCTTGTCTCTaGCAAGCACTGGACCTGATG +
Preference number: 5 (lower is better)
Translates to: LAQPRARLLPPSYQRPVHSPACL*QALDLM
Trigger: CATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGA...GTGGACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTTATCCTGAACGGGGGTaGGTGGGACTTCACCTAAGC +
Preference number: 5 (lower is better)
Translates to: GTGPATSSAFATFLPTSGYPERG*VGLHLS
Trigger: GCTTAGGTGAAGTCCCACCAACCCCCGTTCAGGATA...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GTCTCGAGCCTGAACCAGAGGTCAGCTGAGGGCCTCTCCGCACCCCACCCCTCCACCGGTCATCCATTATaGGCCTTAGATCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: VSSLNQRSAEGLSAPHPSTGHPL*ALDPEI
Trigger: GATCTCTGGATCTAAGGCCAATAATGGATGACCGGT...GGAGGGGTGGGGTGCGGAGAGGCCCTCAGCTGACCTCTGGTTCAGGCTCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 90 bp GTCTGCAAGGAGTCTGTCACTGACGGAGTCTGCCTTCCTCTGCAATaGCGCCTGGTCCTTGGGCCGGGGAAACTGCAGCTTCATTCCTTC +
Preference number: 5 (lower is better)
Translates to: VCKESVTDGVCLPLQ*RLVLGPGKLQLHSF
Trigger: GAAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678544.1
CDS GCA 90 bp CTCGTGTCTGCAAGGAGTCTGTCACTGACGGAGTCTGCCTTCCTCTaGAATGCCGCCTGGTCCTTGGGCCGGGGAAACTGCAGCTTCATT +
Preference number: 5 (lower is better)
Translates to: LVSARSLSLTESAFL*NAAWSLGRGNCSFI
Trigger: AATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTGCAGACACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp GGTCTTCTTTCTCGTGTCTGCAAGGAGTCTGTCACTGACGGAGTCTaGCTTCCTCTGCAATGCCGCCTGGTCCTTGGGCCGGGGAAACTG +
Preference number: 5 (lower is better)
Translates to: GLLSRVCKESVTDGV*LPLQCRLVLGPGKL
Trigger: CAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTGCAGACACGAGAAAGAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp GCACTGGAGGAAAGAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTaGTTGGTCTTCTTTCTCGTGTCTGCAAGGAGTCTGTCACTGACG +
Preference number: 5 (lower is better)
Translates to: ALEERGAAFPSILSA*LVFFLVSARSLSLT
Trigger: CGTCAGTGACAGACTCCTTGCAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTCTTTCCTCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 90 bp ATCTCGGCGAGGTCACTCTCGAAGCCCTGGATCTGCAGCTCCTGCTaGTGGGATTCCTGCTCCAGCAGACTGAGTTTCCTCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: ISARSLSKPWICSSC*WDSCSSRLSFLCKD
Trigger: GTCCTTGCAGAGGAAACTCAGTCTGCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGACCTCGCCGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 90 bp TGTATCCCGGAGCACAGGATTCACAGAACTGGCCCGTGTAGCCAGTaGGACATGAACAAATCTCCACCCAGGAGGCTGGCGGGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: CIPEHRIHRTGPCSQ*DMNKSPPRRLAGKA
Trigger: GGCTTTCCCCGCCAGCCTCCTGGGTGGAGATTTGTTCATGTCCCACTGGCTACACGGGCCAGTTCTGTGAATCCTGTGCTCCGGGATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCCAGTCACCGTGGGCTaGCAGGCGCAGGTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDPVTVG*QAQVPV
Trigger: CACAGGCACCTGCGCCTGCAAGCCCACGGTGACTGG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCGTAGCAGGACGGACATaGCTGGCAGTGTGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: KNPPGILHFLACWSPGCVVAGRT*LAVCAV
Trigger: GACGGCACACACTGCCAGCAATGTCCGTCCTGCTAC...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGCCACAGTCGGACCCTaGGAGCCACCCCTCCGTCAA +
Preference number: 5 (lower is better)
Translates to: EAGIRTESPACLLQALDLATVGP*EPPLRQ
Trigger: TTGACGGAGGGGTGGCTCCAAGGGTCCGACTGTGGC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACATCCTCTCCGCCTGCTaGGTCTTCTTTCTCGTGTCT +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHILSAC*VFFLVS
Trigger: AGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGAT...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCTGTTGGAGCGTGGCTaGCGTCTGGCTGGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRLLERG*RLAGEP
Trigger: AGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGTACTGGCCCAGCCACGAGCTCGGCTTTTGCCACCTTCCTACCAACGTCCGGTCACGTGTGTATGTTATaGACACTGGGGTGTGCCCGT +
Preference number: 5 (lower is better)
Translates to: GTGPATSSAFATFLPTSGHVCML*TLGCAR
Trigger: ACGGGCACACCCCAGTGTCAATAACATACACACGTG...ACCGGACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGGCTGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGCCACAGGGCGATTCCCAGACAGGACAGACTGGAATGGCAGCCAGGCTTGCACGACAGAGTCACCAGCTaGTCTCTTGCAAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: GHRAIPRQDRLEWQPGLHDRVTS*SLASTG
Trigger: TCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTC...GTGCAAGCCTGGCTGCCATTCCAGTCTGTCCTGTCTGGGAATCGCCCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS TCA 90 bp GCAGCTTCATTCCTTCCAGATCAGCCAGCAGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCTGGACAGATGAGGAAGCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: AASFLPDQPAESWLP*QSLSQPGQMRKPGS
Trigger: TGACCCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTGCTGGCTGATCTGGAAGGAATGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678544.1
CDS TCA 90 bp GACACGATGGACCCGGTTCATGCAGAGGTGATGAGTATAAGGCGATaGGCACAGAGGGGTCGGCCAGCTACCTCGTGCATTGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: DTMDPVHAEVMSIRR*AQRGRPATSCIAPE
Trigger: TTCGGGAGCAATGCACGAGGTAGCTGGCCGACCCCTCTGTGCTCATCGCCTTATACTCATCACCTCTGCATGAACCGGGTCCATCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 90 bp CGCGAAAGGGTTGCCATAGAAACCTGGCAAACAGCGTTCACAGGATaGGCCCTCGGTATGGTGGCTGCAGACACAGATCCCTGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: RERVAIETWQTAFTG*ALGMVAADTDPCVG
Trigger: CCCAACACAGGGATCTGTGTCTGCAGCCACCATACCGAGGGCCCATCCTGTGAACGCTGTTTGCCAGGTTTCTATGGCAACCCTTTCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 90 bp AGGAGTCTGTCACTGACGGAGTCTGCCTTCCTCTGCAATGCCGCCTaGTCCTTGGGCCGGGGAAACTGCAGCTTCATTCCTTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: RSLSLTESAFLCNAA*SLGRGNCSFIPSRS
Trigger: TGATCTGGAAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678544.1
CDS CCA 90 bp AGGCTCAGGAAGGGAAAGTCCTTGGCCGAGGTCACAGAGCTGGAGTaGCAGAGCTGGGATTGCATCCCGTGTCCATCTGATGACACTGCT +
Preference number: 5 (lower is better)
Translates to: RLRKGKSLAEVTELE*QSWDCIPCPSDDTA
Trigger: AGCAGTGTCATCAGATGGACACGGGATGCAATCCCAGCTCTGCCACTCCAGCTCTGTGACCTCGGCCAAGGACTTTCCCTTCCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTGGTCACCCGTGGTGTaGTGCAGGCAGCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDWSPVV*CRQRRQ
Trigger: CTGCCTGCGCTGCCTGCACAACACCACGGGTGACCA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGCTGTTGGAGCGTGGCTaGCGTCTGGCTGGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: EAGIRTESPACLLQALDLLLERG*RLAGEP
Trigger: AGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAG...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCTGCTGGGACGCCTGTaGGAGCGTGGCTTGCGTCTG +
Preference number: 5 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDLLGRL*ERGLRL
Trigger: CAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCTGGGACTAGGGGCTTaGGCTGTTGCTGACCCCCTT +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRLGLGA*AVADPL
Trigger: AAGGGGGTCAGCAACAGCCAAAGCCCCTAGTCCCAG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS TCA 90 bp TCTTTCTCGTGTCTTCCAGATCAGCCAGCAGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCTGGACAGATGAGGAAGCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: SFSCLPDQPAESWLP*QSLSQPGQMRKPGS
Trigger: TGACCCAGGCTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTGCTGGCTGATCTGGAAGACACGAGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355452.5
CDS TCA 90 bp CCCACTGCAAAGTGGGAATGCTTCCCCAGCTCCACAGCCCTGAACTaGGATCTGGGGGCTGGATGGCTTCCGAATGCAGAATTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: PTAKWECFPSSTALN*DLGAGWLPNAEFPR
Trigger: TCTGGGAAATTCTGCATTCGGAAGCCATCCAGCCCCCAGATCTCAGTTCAGGGCTGTGGAGCTGGGGAAGCATTCCCACTTTGCAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS GCA 90 bp TATAAGGCGATGAGCACAGAGGGGTCGGCCAGCTACCTCGTGCATTaGTCCCGAATCTCTGTCCAGCTCCCATGGAAGCAGCCTCGAAAT +
Preference number: 5 (lower is better)
Translates to: YKAMSTEGSASYLVH*SRISVQLPWKQPRN
Trigger: ATTTCGAGGCTGCTTCCATGGGAGCTGGACAGAGATTCGGGAGCAATGCACGAGGTAGCTGGCCGACCCCTCTGTGCTCATCGCCTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGGCCTGGGCTGGGGCTaGATGGGTGTCCAGCGACCC +
Preference number: 5 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRGLGWG*MGVQRP
Trigger: GGGTCGCTGGACACCCATCAAGCCCCAGCCCAGGCC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GTCCCCTGGCTGTGTCGAGCTGTAGGGAGTGCACGCAGCAACACAGGTCAGGGACTGGATGGATTAGACTaGAACACGTGTGGGTCATAC +
Preference number: 5 (lower is better)
Translates to: VPWLCRAVGSARSNTGQGLDGLD*NTCGSY
Trigger: GTATGACCCACACGTGTTCAAGTCTAATCCATCCAG...TCCCTGACCTGTGTTGCTGCGTGCACTCCCTACAGCTCGACACAGCCAGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCTGTTGCTGACCCCCTaGATCTCTGCAGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGALAVADPLDLCRSAETLLLTP*ISADLL
Trigger: CAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCGCATTTCTTGGCCTGTaGGTCCCCTGGCTGTGTCGA +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRAFLGL*VPWLCR
Trigger: TCGACACAGCCAGGGGACCAACAGGCCAAGAAATGC...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCCCACGTTCAACGGAATaGGTCTGTGCTGCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: LGALAVADPLDLCRSAETPRSTE*VCAAAL
Trigger: TAGGGCAGCAGCACAGACCAATTCCGTTGAACGTGG...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 90 bp AAGCCCTTACTTGGGGCTCAGATGACAGTCCTACCAATTTCTAGCTaGGTGGCCTTGAGCAACCCAGCTAACCTCCCTGACCCACACTGC +
Preference number: 5 (lower is better)
Translates to: KPLLGAQMTVLPISS*VALSNPANLPDPHC
Trigger: GCAGTGTGGGTCAGGGAGGTTAGCTGGGTTGCTCAAGGCCACGCAGCTAGAAATTGGTAGGACTGTCATCTGAGCCCCAAGTAAGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCAGCACCTTGGGGTCCTaGAAGATGTCGTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRSTLGS*KMSSPN
Trigger: GTTTGGGGACGACATCTTCAAGGACCCCAAGGTGCT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCCCACGTTCAACGGAATaGGTCTGTGCTGCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRPRSTE*VCAAAL
Trigger: TAGGGCAGCAGCACAGACCAATTCCGTTGAACGTGG...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCCCTTCCACATTCTCTTaGCAGGGGCAGCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPPSTFS*QGQRPL
Trigger: CAGTGGGCGCTGCCCCTGCAAAGAGAATGTGGAAGG...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGACAGGGGGTCACAGTaGCCCACGGCATTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRDRGSQ*PTALGS
Trigger: GGACCCCAATGCCGTGGGCAACTGTGACCCCCTGTC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATGGGATCTTGCATTTCTaGGCCTGTTGGTCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDGILHF*ACWSPG
Trigger: GCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCC...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATCCACGAGCTCGGCTTTaGCCACCTTCCTACCAACGT +
Preference number: 5 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDPRARL*PPSYQR
Trigger: ACGTTGGTAGGAAGGTGGCAAAAGCCGAGCTCGTGG...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGACCATCCTCGGACACTaGGCTGTGAGTTCGTCTCGA +
Preference number: 5 (lower is better)
Translates to: EAGIRTESPACLLQALDLTILGH*AVSSSR
Trigger: TCGAGACGAACTCACAGCCAAGTGTCCGAGGATGGT...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTATCCTGAACGGGGGTaGGTGGGACTTCACCTAAGC +
Preference number: 5 (lower is better)
Translates to: EAGIRTESPACLLQALDLYPERG*VGLHLS
Trigger: GCTTAGGTGAAGTCCCACCAACCCCCGTTCAGGATA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 90 bp TTTGGGATTTCAGGGTTACTGAATCGACACGATGGACCCGGTTCATaGAGAGGTGATGAGTATAAGGCGATGAGCACAGAGGGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: FGISGLLNRHDGPGS*RGDEYKAMSTEGSA
Trigger: GGCCGACCCCTCTGTGCTCATCGCCTTATACTCATCACCTCTGCATGAACCGGGTCCATCGTGTCGATTCAGTAACCCTGAAATCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS-3UTR CAA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTGTATCTGCGCCAACTaGCTGCACGGTGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPCICAN*LHGGQH
Trigger: GTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACTGTTGGAGCGTGGCTaGCGTCTGGCTGGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRLLERG*RLAGEP
Trigger: AGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp CTAGGGGCTTTGGCTGTTGCTGACCCCCTTGATCTCTGCAGATCTGCTGAGACCATCTCATGTAACAACTaGCCCAACATCCAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LGALAVADPLDLCRSAETISCNN*PNIQRV
Trigger: CACCCTCTGGATGTTGGGCAAGTTGTTACATGAGAT...GGTCTCAGCAGATCTGCAGAGATCAAGGGGGTCAGCAACAGCCAAAGCCCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGTCACCAGCTTGTCTCTaGCAAGCACTGGACCTGATG +
Preference number: 5 (lower is better)
Translates to: EAGIRTESPACLLQALDLSPACL*QALDLM
Trigger: CATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGA...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GAAGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGGACAGAGTCACCAGCTaGTCTCTTGCAAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: EAGIRTESPACLLQALDLDRVTS*SLASTG
Trigger: TCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTC...CAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp AAGAACCCTCCCGGGATCTTGCATTTCTTGGCCTGTTGGTCCCCTGGCTGTGTCACCGGTCATCCATTATaGGCCTTAGATCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: KNPPGILHFLACWSPGCVTGHPL*ALDPEI
Trigger: GATCTCTGGATCTAAGGCCAATAATGGATGACCGGT...GACACAGCCAGGGGACCAACAGGCCAAGAAATGCAAGATCCCGGGAGGGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS TCA 90 bp AAGCAGCCTCGAAATAACCTAATGGGTGAGTTCTATGTGACAGACTaGGGCTCAGGAAGGGAAAGTCCTTGGCCGAGGTCACAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KQPRNNLMGEFYVTD*GSGRESPWPRSQSW
Trigger: CCAGCTCTGTGACCTCGGCCAAGGACTTTCCCTTCCTGAGCCTCAGTCTGTCACATAGAACTCACCCATTAGGTTATTTCGAGGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 90 bp GCCAGCTACCTCGTGCATTGCTCCCGAATCTCTGTCCAGCTCCCATaGAAGCAGCCTCGAAATAACCTAATGGGTGAGTTCTATGTGACA +
Preference number: 5 (lower is better)
Translates to: ASYLVHCSRISVQLP*KQPRNNLMGEFYVT
Trigger: TGTCACATAGAACTCACCCATTAGGTTATTTCGAGGCTGCTTCCATGGGAGCTGGACAGAGATTCGGGAGCAATGCACGAGGTAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS-3UTR CAA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCTCGTCCCCAAACGTGTaGAGCCGGTCTAGAGAGATG +
Preference number: 5 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPSSPNV*SRSREM
Trigger: CATCTCTCTAGACCGGCTCAACACGTTTGGGGACGA...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATATCCTCTCCGCCTGCTaGGTCTTCTTTCTCGTGTCT +
Preference number: 5 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDILSAC*VFFLVS
Trigger: AGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGAT...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp AGTGAAAGGGTCCTTTATTTCCACGTTCAACGGAATTGGTCTGTGCTGCTGCCCAGCTTGGCACTGTCCTaGGCCAACACCTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SERVLYFHVQRNWSVLLPSLALS*ANTSAS
Trigger: AGAAGCAGAGGTGTTGGCCAAGGACAGTGCCAAGCT...GGGCAGCAGCACAGACCAATTCCGTTGAACGTGGAAATAAAGGACCCTTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355452.5
ENST00000361069.9
CDS-3UTR CAA 90 bp AGCTGGAATCAGGACAGAGTCACCAGCTTGTCTCTTGCAAGCACTGGACCTGATTCACCAGCTTGTCTCTaGCAAGCACTGGACCTGATG +
Preference number: 5 (lower is better)
Translates to: SWNQDRVTSLSLASTGPDSPACL*QALDLM
Trigger: CATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGA...ATCAGGTCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTCCTGATTCCAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp TATGCATGTGCAGGGGTGAGAGTGTGCACTCATGTCCAGGTGAACTGGGTACGCACCGGTCATCCATTATaGGCCTTAGATCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: YACAGVRVCTHVQVNWVRTGHPL*ALDPEI
Trigger: GATCTCTGGATCTAAGGCCAATAATGGATGACCGGT...GCGTACCCAGTTCACCTGGACATGAGTGCACACTCTCACCCCTGCACATGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGATGTGGCATCTCCCTCTaGTATCCCGGAGCACAGGAT +
Preference number: 5 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRCGISL*YPGAQD
Trigger: ATCCTGTGCTCCGGGATACAAGAGGGAGATGCCACA...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAGACAGAGTCACCAGCTaGTCTCTTGCAAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRDRVTS*SLASTG
Trigger: TCCAGTGCTTGCAAGAGACAAGCTGGTGACTCTGTC...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGACTGGATGGATTAGACTaGAACACGTGTGGGTCATAC +
Preference number: 5 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRLDGLD*NTCGSY
Trigger: GTATGACCCACACGTGTTCAAGTCTAATCCATCCAG...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS-3UTR CAA 90 bp GGGTGTCCTCTCCTATCAGGCACAAGAAAAACAAAGAAAGCCACTCTGCAAAGAATCTCATGTAACAACTaGCCCAACATCCAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GCPLLSGTRKTKKATLQRISCNN*PNIQRV
Trigger: CACCCTCTGGATGTTGGGCAAGTTGTTACATGAGAT...TCTTTGCAGAGTGGCTTTCTTTGTTTTTCTTGTGCCTGATAGGAGAGGACACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678758.1
CDS GCA 72 bp CGGCGCCCACGTGGGGACAGAAGTCCTCGGGCGGGCTaGCGCACGTGTGCGAGGCCTGGGCGAGCCGCCCAA +
Preference number: 6 (lower is better)
Translates to: RRPRGDRSPRAG*RTCARPGRAAQ
Trigger: TTGGGCGGCTCGCCCAGGCCTCGCACACGTGCGGCAGCCCGCCCGAGGACTTCTGTCCCCACGTGGGCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp AGTTGCAGGGCAGACACTCGTGGGCAGCCTCGGCGGTaGCCCGGGCCCACGGGCGGTCCTGGAAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SCRADTRGQPRR*PGPTGGPGRRA
Trigger: TGCCCTTCTTCCAGGACCGCCCGTGGGCCCGGGGCACCGCCGAGGCTGCCCACGAGTGTCTGCCCTGCAACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CCGGCCTGGGCACAGCGGGCACCCTTGTTCAGCCTCTaGAGCTGCTCCCGGGCGGCCTTGACAGCACCCTCG +
Preference number: 6 (lower is better)
Translates to: PAWAQRAPLFSL*SCSRAALTAPS
Trigger: CGAGGGTGCTGTCAAGGCCGCCCGGGAGCAGCTGCAGAGGCTGAACAAGGGTGCCCGCTGTGCCCAGGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GGAAGGGCAAGCAGCGGATCCTCTCCTTGGGGGAGGTaGCCTGCTGGGCTGAGGCGGCGGGTCTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GRASSGSSPWGR*PAGLRRRVCPW
Trigger: CCAGGGGCAGACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTTGCCCTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 72 bp GTGCCGGTGGTGTTGTGCTGGCACCGGCAGGCCAACTaGCCTGCCACGTCGGGGCCGCACTCGCTGGCATGC +
Preference number: 6 (lower is better)
Translates to: VPVVLCWHRQAN*PATSGPHSLAC
Trigger: GCATGCCAGCGAGTGCGGCCCCGACGTGGCAGGCCAGTTGGCCTGCCGGTGCCAGCACAACACCACCGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CCGGGCGGATGTGAGCCGGACCTCAGTCAGGAACACTaGACCGGCAGGGCTGGGGCCGGGACTGACGCGGAG +
Preference number: 6 (lower is better)
Translates to: PGGCEPDLSQEH*TGRAGAGTDAE
Trigger: CTCCGCGTCAGTCCCGGCCCCAGCCCTGCCGGTCCAGTGTTCCTGACTGAGGTCCGGCTCACATCCGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp AAGCAGCGGATCCTCTCCTTGGGGGAGGTGCCCTGCTaGGCTGAGGCGGCGGGTCTGCCCCTGGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: KQRILSLGEVPC*AEAAGLPLAAS
Trigger: GCTGGCAGCCAGGGGCAGACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 72 bp TCAGGAACACTGGACCGGCAGGGCTGGGGCCGGGACTaGCGCGGAGGCGGAGGCTGGTCAGGTTGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: SGTLDRQGWGRD*RGGGGWSGWRG
Trigger: TCCTCGCCAACCTGACCAGCCTCCGCCTCCGCGTCAGTCCCGGCCCCAGCCCTGCCGGTCCAGTGTTCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GGTGGTGTTGTGCTGGCACCGGCAGGCCAACTGGCCTaGCACGTCGGGGCCGCACTCGCTGGCATGCCCGTT +
Preference number: 6 (lower is better)
Translates to: GGVVLAPAGQLA*HVGAALAGMPV
Trigger: AACGGGCATGCCAGCGAGTGCGGCCCCGACGTGGCAGGCCAGTTGGCCTGCCGGTGCCAGCACAACACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GCCAGCACCTGCTGGGACGCCTGTTGGAGCGTGGCTTaGGTCTGGCTGGTGAGCCTGCTGGCACGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: ASTCWDACWSVA*VWLVSLLARRC
Trigger: GCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp CCAGGCCTGCACACGCATGTGCCGTTCTCGTGGCACTaGGCCGAGGCAGCGCCCAGTGGGGAGCACCTGCAG +
Preference number: 6 (lower is better)
Translates to: PGLHTHVPFSWH*AEAAPSGEHLQ
Trigger: CTGCAGGTGCTCCCCACTGGGCGCTGCCTCGGCCCAGTGCCACGAGAACGGCACATGCGTGTGCAGGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 72 bp CGCCAGCACCTGCTGGGACGCCTGTTGGAGCGTGGCTaGCGTCTGGCTGGTGAGCCTGCTGGCACGGCGGTG +
Preference number: 6 (lower is better)
Translates to: RQHLLGRLLERG*RLAGEPAGTAV
Trigger: CACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CAA 90 bp CTCAGGCAGGGCCTGGAAAGGAAGGGCAAGCAGCGGATCCTCTCCTaGGGGGAGGTGCCCTGCTGGGCTGAGGCGGCGGGTCTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LRQGLERKGKQRILS*GEVPCWAEAAGLPL
Trigger: CAGGGGCAGACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTTGCCCTTCCTTTCCAGGCCCTGCCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CAA 90 bp TGGGTGCAGGTCTTCTGGGATCCGGCCTGGGCACAGCGGGCACCCTaGTTCAGCCTCTGCAGCTGCTCCCGGGCGGCCTTGACAGCACCC +
Preference number: 6 (lower is better)
Translates to: WVQVFWDPAWAQRAP*FSLCSCSRAALTAP
Trigger: GGGTGCTGTCAAGGCCGCCCGGGAGCAGCTGCAGAGGCTGAACAAGGGTGCCCGCTGTGCCCAGGCCGGATCCCAGAAGACCTGCACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 72 bp AGGAGGCTGGCGGGGAAAGCCCTGGCCGGGCGGATGTaGGCCGGACCTCAGTCAGGAACACTGGACCGGCAG +
Preference number: 6 (lower is better)
Translates to: RRLAGKALAGRM*AGPQSGTLDRQ
Trigger: CTGCCGGTCCAGTGTTCCTGACTGAGGTCCGGCTCACATCCGCCCGGCCAGGGCTTTCCCCGCCAGCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 72 bp GGGACGCCTGTTGGAGCGTGGCTTGCGTCTGGCTGGTaGGCCTGCTGGCACGGCGGTGCGCCTGTTTCCGCT +
Preference number: 6 (lower is better)
Translates to: GTPVGAWLASGW*ACWHGGAPVSA
Trigger: AGCGGAAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp GTCGTACAGGCCGACTGGCCAGGGCAGGGACAGGGCTaGCAGTCGTCGGCTTGGCCCGCGAAAGGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: VVQADWPGQGQG*QSSAWPAKGLP
Trigger: TGGCAACCCTTTCGCGGGCCAAGCCGACGACTGCCAGCCCTGTCCCTGCCCTGGCCAGTCGGCCTGTACGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp TCGAAGCCAGGCCTGCACACGCATGTGCCGTTCTCGTaGCACTGGGCCGAGGCAGCGCCCAGTGGGGAGCAC +
Preference number: 6 (lower is better)
Translates to: SKPGLHTHVPFS*HWAEAAPSGEH
Trigger: GTGCTCCCCACTGGGCGCTGCCTCGGCCCAGTGCCACGAGAACGGCACATGCGTGTGCAGGCCTGGCTTCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CGAGCAGGGCCCTCCAAGCAGTGGCTGCGATCTTGGTaGCGGTGTCTCTGTGGCTCCTGGCGAGGGCACGGG +
Preference number: 6 (lower is better)
Translates to: RAGPSKQWLRSW*RCLCGSWRGHG
Trigger: CCCGTGCCCTCGCCAGGAGCCACAGAGACACCGCCACCAAGATCGCAGCCACTGCTTGGAGGGCCCTGCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp ACCTGCTGGGACGCCTGTTGGAGCGTGGCTTGCGTCTaGCTGGTGAGCCTGCTGGCACGGCGGTGCGCCTGT +
Preference number: 6 (lower is better)
Translates to: TCWDACWSVACV*LVSLLARRCAC
Trigger: ACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp GCCTGGAAAGGAAGGGCAAGCAGCGGATCCTCTCCTTaGGGGAGGTGCCCTGCTGGGCTGAGGCGGCGGGTC +
Preference number: 6 (lower is better)
Translates to: AWKGRASSGSSP*GRCPAGLRRRV
Trigger: GACCCGCCGCCTCAGCCCAGCAGGGCACCTCCCCCAAGGAGAGGATCCGCTGCTTGCCCTTCCTTTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CAA 90 bp CTGGTGTTGGAGGCGAGCAGGGCCCTCCAAGCAGTGGCTGCGATCTaGGTGGCGGTGTCTCTGTGGCTCCTGGCGAGGGCACGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LVLEASRALQAVAAI*VAVSLWLLARARAS
Trigger: AGAGGCCCGTGCCCTCGCCAGGAGCCACAGAGACACCGCCACCAAGATCGCAGCCACTGCTTGGAGGGCCCTGCTCGCCTCCAACACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 90 bp CTCCTGTCTGCGTGCTTCAGACGCCAGCACCTGCTGGGACGCCTGTaGGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTGCTGGCACGGCG +
Preference number: 6 (lower is better)
Translates to: LLSACFRRQHLLGRL*ERGLRLAGEPAGTA
Trigger: CGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACGCAGACAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS TCA 72 bp TCACAGTGTGGCCCAGCTGTGTGGTCACGGCAGTGGTaGCAGCGCCCGCCGTGGCCTGTGCTGCGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SQCGPAVWSRQW*QRPPWPVLRKS
Trigger: GCTCTTCCGCAGCACAGGCCACGGCGGGCGCTGTCACCACTGCCGTGACCACACAGCTGGGCCACACTGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CTGCCACGTCGGGGCCGCACTCGCTGGCATGCCCGTTaGACTTGCACCTGCCGCCCACAGAGAAGTCGGACA +
Preference number: 6 (lower is better)
Translates to: LPRRGRTRWHAR*TCTCRPQRSRT
Trigger: TGTCCGACTTCTCTGTGGGCGGCAGGTGCAAGTGCAACGGGCATGCCAGCGAGTGCGGCCCCGACGTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GGGGGAGTGTGTGCCGGGGATCTGGGCAGCCCTCACTaGCAGCTGGCACAGTTCTCGGGCAGGCTGTGCAGA +
Preference number: 6 (lower is better)
Translates to: GGVCAGDLGSPH*QLAQFSGRLCR
Trigger: TCTGCACAGCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACACTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp GGCAGTGGGTACACACCACCTCCCGGCTCTCTGGGATaGTCGTACAGGCCGACTGGCCAGGGCAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: GSGYTPPPGSLG*SYRPTGQGRDR
Trigger: CCTGTCCCTGCCCTGGCCAGTCGGCCTGTACGACCATCCCAGAGAGCCGGGAGGTGGTGTGTACCCACTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp AGGCGAGCAGGGCCCTCCAAGCAGTGGCTGCGATCTTaGTGGCGGTGTCTCTGTGGCTCCTGGCGAGGGCAC +
Preference number: 6 (lower is better)
Translates to: RRAGPSKQWLRS*WRCLCGSWRGH
Trigger: GTGCCCTCGCCAGGAGCCACAGAGACACCGCCACCAAGATCGCAGCCACTGCTTGGAGGGCCCTGCTCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 72 bp ACGTCGGGGCCGCACTCGCTGGCATGCCCGTTGCACTaGCACCTGCCGCCCACAGAGAAGTCGGACACGGCA +
Preference number: 6 (lower is better)
Translates to: TSGPHSLACPLH*HLPPTEKSDTA
Trigger: TGCCGTGTCCGACTTCTCTGTGGGCGGCAGGTGCAAGTGCAACGGGCATGCCAGCGAGTGCGGCCCCGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 72 bp GAGGCGAGCAGGGCCCTCCAAGCAGTGGCTGCGATCTaGGTGGCGGTGTCTCTGTGGCTCCTGGCGAGGGCA +
Preference number: 6 (lower is better)
Translates to: EASRALQAVAAI*VAVSLWLLARA
Trigger: TGCCCTCGCCAGGAGCCACAGAGACACCGCCACCAAGATCGCAGCCACTGCTTGGAGGGCCCTGCTCGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 90 bp TGCTTCAGACGCCAGCACCTGCTGGGACGCCTGTTGGAGCGTGGCTaGCGTCTGGCTGGTGAGCCTGCTGGCACGGCGGTGCGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: CFRRQHLLGRLLERG*RLAGEPAGTAVRLF
Trigger: AAACAGGCGCACCGCCGTGCCAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 72 bp CCTAGGCGGAGGGTGATGTTGACCGAGGTGGGGTACTaGACGCCGAAGGCCATGGACGGGCTCTGCCACCAG +
Preference number: 6 (lower is better)
Translates to: PRRRVMLTEVGY*TPKAMDGLCHQ
Trigger: CTGGTGGCAGAGCCCGTCCATGGCCTTCGGCGTGCAGTACCCCACCTCGGTCAACATCACCCTCCGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CACGGCAGTGGTGACAGCGCCCGCCGTGGCCTGTGCTaGGGAAGAGCTCCCGATCAAACGTGCATTCCTCGG +
Preference number: 6 (lower is better)
Translates to: HGSGDSARRGLC*GRAPDQTCIPR
Trigger: CCGAGGAATGCACGTTTGATCGGGAGCTCTTCCGCAGCACAGGCCACGGCGGGCGCTGTCACCACTGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp TTGCCCACGGCATTGGGGTCCACGTTCCCGCTACACTaGCACTGGTGGCAGGGCTGGGGGTGCCCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: LPTALGSTFPLH*HWWQGWGCPKS
Trigger: GCTCTTTGGGCACCCCCAGCCCTGCCACCAGTGCCAGTGTAGCGGGAACGTGGACCCCAATGCCGTGGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp TCTGCCAGCTGGGTGCAGGTCTTCTGGGATCCGGCCTaGGCACAGCGGGCACCCTTGTTCAGCCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SASWVQVFWDPA*AQRAPLFSLCS
Trigger: GCTGCAGAGGCTGAACAAGGGTGCCCGCTGTGCCCAGGCCGGATCCCAGAAGACCTGCACCCAGCTGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp TGTCTCTGTGGCTCCTGGCGAGGGCACGGGCCTCTGTaGCCAGGTGGCTCCATTTGGTCGGCTGACTGGGAC +
Preference number: 6 (lower is better)
Translates to: CLCGSWRGHGPL*PGGSIWSADWD
Trigger: GTCCCAGTCAGCCGACCAAATGGAGCCACCTGGCCACAGAGGCCCGTGCCCTCGCCAGGAGCCACAGAGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp TCTGCCACAGCCGTCCTCAGTGCTTTCTGGGCCGCCTaGACCTCCTGGTACCTGTCCTCCAGGTCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: SATAVLSAFWAA*TSWYLSSRSRW
Trigger: CCAGCGGGACCTGGAGGACAGGTACCAGGAGGTCCAGGCGGCCCAGAAAGCACTGAGGACGGCTGTGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CGTGCTTCAGACGCCAGCACCTGCTGGGACGCCTGTTaGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RASDASTCWDAC*SVACVWLVSLL
Trigger: CAGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp GCAGGAATAGCAGGGGTCAGGCTTTGTGTGGACCCCTaGAGGCAGAGGGCCCAGGGCGAGAGGAGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: AGIAGVRLCVDP*RQRAQGERSQA
Trigger: AGCCTGGCTCCTCTCGCCCTGGGCCCTCTGCCTCCAGGGGTCCACACAAAGCCTGACCCCTGCTATTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CAA 72 bp GCGTGCTTCAGACGCCAGCACCTGCTGGGACGCCTGTaGGAGCGTGGCTTGCGTCTGGCTGGTGAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: ACFRRQHLLGRL*ERGLRLAGEPA
Trigger: AGCAGGCTCACCAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS TCA 72 bp TTCGCCTTCAGGCCCAGGTCTTCAGCCCGGGACTTCTaGGGCTGCAGGGAGACAATGCGCTCAGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: FAFRPRSSARDF*GCRETMRSGRA
Trigger: GGCCCTGCCTGAGCGCATTGTCTCCCTGCAGCCTCAGAAGTCCCGGGCTGAAGACCTGGGCCTGAAGGCGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS GCA 72 bp GCTCCCGATCAAACGTGCATTCCTCGGAGCGGCCACTaGAGTTGCAGGGCAGACACTCGTGGGCAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: APDQTCIPRSGH*SCRADTRGQPR
Trigger: CCGAGGCTGCCCACGAGTGTCTGCCCTGCAACTGCAGTGGCCGCTCCGAGGAATGCACGTTTGATCGGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GGTCACGGCAGTGGTGACAGCGCCCGCCGTGGCCTGTaGTGCGGAAGAGCTCCCGATCAAACGTGCATTCCT +
Preference number: 6 (lower is better)
Translates to: GHGSGDSARRGL*CGRAPDQTCIP
Trigger: AGGAATGCACGTTTGATCGGGAGCTCTTCCGCAGCACAGGCCACGGCGGGCGCTGTCACCACTGCCGTGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp TCCTGCAGGTGGAACCTGAGCTCTACCTCCCTGGGATaGCCGGCATCCTGGGGGCCAGACAGGCTAGAGTGC +
Preference number: 6 (lower is better)
Translates to: SCRWNLSSTSLG*PASWGPDRLEC
Trigger: GCACTCTAGCCTGTCTGGCCCCCAGGATGCCGGGCATCCCAGGGAGGTAGAGCTCAGGTTCCACCTGCAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp TCCAGCTCCTGTCTGCGTGCTTCAGACGCCAGCACCTaGTGGGACGCCTGTTGGAGCGTGGCTTGCGTCTGG +
Preference number: 6 (lower is better)
Translates to: SSSCLRASDAST*WDACWSVACVW
Trigger: CCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACGCAGACAGGAGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp GTGGGCTTGCAGGCGCAGGTGCCTGTGTCATCGCACTaGAGGTGTAGGGAGCCTGCCGACTGGCAGTCACAG +
Preference number: 6 (lower is better)
Translates to: VGLQAQVPVSSH*RCREPADWQSQ
Trigger: CTGTGACTGCCAGTCGGCAGGCTCCCTACACCTCCAGTGCGATGACACAGGCACCTGCGCCTGCAAGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CGGGCAGACAGCGGTCACACTTCCAGCCAGTCACCGTaGGCTTGCAGGCGCAGGTGCCTGTGTCATCGCACT +
Preference number: 6 (lower is better)
Translates to: RADSGHTSSQSP*ACRRRCLCHRT
Trigger: AGTGCGATGACACAGGCACCTGCGCCTGCAAGCCCACGGTGACTGGCTGGAAGTGTGACCGCTGTCTGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp AGCTGGTGTTGGAGGCGAGCAGGGCCCTCCAAGCAGTaGCTGCGATCTTGGTGGCGGTGTCTCTGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SWCWRRAGPSKQ*LRSWWRCLCGS
Trigger: GGAGCCACAGAGACACCGCCACCAAGATCGCAGCCACTGCTTGGAGGGCCCTGCTCGCCTCCAACACCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp AGCTCCTGTCTGCGTGCTTCAGACGCCAGCACCTGCTaGGACGCCTGTTGGAGCGTGGCTTGCGTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SSCLRASDASTC*DACWSVACVWL
Trigger: CAGCCAGACGCAAGCCACGCTCCAACAGGCGTCCCAGCAGGTGCTGGCGTCTGAAGCACGCAGACAGGAGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp TGTGTGCCGGGGATCTGGGCAGCCCTCACTGCCAGCTaGCACAGTTCTCGGGCAGGCTGTGCAGAATGGCCT +
Preference number: 6 (lower is better)
Translates to: CVPGIWAALTAS*HSSRAGCAEWP
Trigger: AGGCCATTCTGCACAGCCTGCCCGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CAA 90 bp AACCCGGGCAGACAGCGGTCACACTTCCAGCCAGTCACCGTGGGCTaGCAGGCGCAGGTGCCTGTGTCATCGCACTGGAGGTGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: NPGRQRSHFQPVTVG*QAQVPVSSHWRCRE
Trigger: CTCCCTACACCTCCAGTGCGATGACACAGGCACCTGCGCCTGCAAGCCCACGGTGACTGGCTGGAAGTGTGACCGCTGTCTGCCCGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 90 bp CGGGGAAGCCAGCAAGGCCAGGTACGGGGCTGTATCTGCGCCAACTaGCTGCACGGTGGCCAACACGCTTTCCGCTTCAGGCAGCACCTC +
Preference number: 6 (lower is better)
Translates to: RGSQQGQVRGCICAN*LHGGQHAFRFRQHL
Trigger: GAGGTGCTGCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTTGCTGGCTTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GACAGCGGTCACACTTCCAGCCAGTCACCGTGGGCTTaGAGGCGCAGGTGCCTGTGTCATCGCACTGGAGGT +
Preference number: 6 (lower is better)
Translates to: DSGHTSSQSPWA*RRRCLCHRTGG
Trigger: ACCTCCAGTGCGATGACACAGGCACCTGCGCCTGCAAGCCCACGGTGACTGGCTGGAAGTGTGACCGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CCTCTCCCAGCAGAATGTCTAGTGGTCCCCAGGGACTaGCACAGTCGGACCCTTGGAGCCACCCCTCCGTCA +
Preference number: 6 (lower is better)
Translates to: PLPAECLVVPRD*HSRTLGATPPS
Trigger: TGACGGAGGGGTGGCTCCAAGGGTCCGACTGTGGCAGTCCCTGGGGACCACTAGACATTCTGCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CGGGGAAGCCAGCAAGGCCAGGTACGGGGCTGTATCTaGGCCAACTTGCTGCACGGTGGCCAACACGCTTTC +
Preference number: 6 (lower is better)
Translates to: RGSQQGQVRGCI*ANLLHGGQHAF
Trigger: GAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTTGCTGGCTTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CAAGTGCAGGGTCTGCAGCCTCCCTCACTGAGCGAGTaGAACCCGGGCAGACAGCGGTCACACTTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: QVQGLQPPSLSE*NPGRQRSHFQP
Trigger: TGGCTGGAAGTGTGACCGCTGTCTGCCCGGGTTCCACTCGCTCAGTGAGGGAGGCTGCAGACCCTGCACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CGGCAGCCCTTGATGGAGAAGCCGAAGAAACCCAGCTaGCACCTGTCACAGGCCTGGCCTGTGACACCTGGG +
Preference number: 6 (lower is better)
Translates to: RQPLMEKPKKPS*HLSQAWPVTPG
Trigger: CCCAGGTGTCACAGGCCAGGCCTGTGACAGGTGCCAGCTGGGTTTCTTCGGCTTCTCCATCAAGGGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CGGACCCTTGGAGCCACCCCTCCGTCAAAGTCAGTCTaGCCTTCAGCTTGGCTGCCTCCTCCTTCACCAGGG +
Preference number: 6 (lower is better)
Translates to: RTLGATPPSKSV*PSAWLPPPSPG
Trigger: CCCTGGTGAAGGAGGAGGCAGCCAAGCTGAAGGCCAGACTGACTTTGACGGAGGGGTGGCTCCAAGGGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CGAGGGCACGGGCCTCTGTGGCCAGGTGGCTCCATTTaGTCGGCTGACTGGGACCTTCCTGAGGAATCTCCA +
Preference number: 6 (lower is better)
Translates to: RGHGPLWPGGSI*SADWDLPEESP
Trigger: TGGAGATTCCTCAGGAAGGTCCCAGTCAGCCGACCAAATGGAGCCACCTGGCCACAGAGGCCCGTGCCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CCTCCAGCAGATTCCAGAGAAGCGCGTAGCTGGTGTTaGAGGCGAGCAGGGCCCTCCAAGCAGTGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: PPADSREARSWC*RRAGPSKQWLR
Trigger: TCGCAGCCACTGCTTGGAGGGCCCTGCTCGCCTCCAACACCAGCTACGCGCTTCTCTGGAATCTGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CCCTTCCCTCCAGCAGATTCCAGAGAAGCGCGTAGCTaGTGTTGGAGGCGAGCAGGGCCCTCCAAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: PFPPADSREARS*CWRRAGPSKQW
Trigger: CCACTGCTTGGAGGGCCCTGCTCGCCTCCAACACCAGCTACGCGCTTCTCTGGAATCTGCTGGAGGGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp GCCAGCTGGCACAGTTCTCGGGCAGGCTGTGCAGAATaGCCTCCAGGTTCTGTTTGTCGGCGCGGATCTCGG +
Preference number: 6 (lower is better)
Translates to: ASWHSSRAGCAE*PPGSVCRRGSR
Trigger: CCGAGATCCGCGCCGACAAACAGAACCTGGAGGCCATTCTGCACAGCCTGCCCGAGAACTGTGCCAGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp TGTAAACAGCAGGTGGGGGAGTGTGTGCCGGGGATCTaGGCAGCCCTCACTGCCAGCTGGCACAGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: CKQQVGECVPGI*AALTASWHSSR
Trigger: CCGAGAACTGTGCCAGCTGGCAGTGAGGGCTGCCCAGATCCCCGGCACACACTCCCCCACCTGCTGTTTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CAA 72 bp AGACAGCGGTCACACTTCCAGCCAGTCACCGTGGGCTaGCAGGCGCAGGTGCCTGTGTCATCGCACTGGAGG +
Preference number: 6 (lower is better)
Translates to: RQRSHFQPVTVG*QAQVPVSSHWR
Trigger: CCTCCAGTGCGATGACACAGGCACCTGCGCCTGCAAGCCCACGGTGACTGGCTGGAAGTGTGACCGCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 90 bp GCACAGTTCTCGGGCAGGCTGTGCAGAATGGCCTCCAGGTTCTGTTaGTCGGCGCGGATCTCGGCGAGGTCACTCTCGAAGCCCTGGATC +
Preference number: 6 (lower is better)
Translates to: AQFSGRLCRMASRFC*SARISARSLSKPWI
Trigger: GATCCAGGGCTTCGAGAGTGACCTCGCCGAGATCCGCGCCGACAAACAGAACCTGGAGGCCATTCTGCACAGCCTGCCCGAGAACTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS TCA 72 bp CAGCCTTCGGCTCCCTGGTGGAAATCGCTGAGGATGTaGTGCACCTGGAACTGGGCAGTGGACGCGCACACC +
Preference number: 6 (lower is better)
Translates to: QPSAPWWKSLRM*CTWNWAVDAHT
Trigger: GGTGTGCGCGTCCACTGCCCAGTTCCAGGTGCATCACATCCTCAGCGATTTCCACCAGGGAGCCGAAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GTCGAAGAAGCCAGGGTAGCAGCGGCTGCAGTCCCGTaGAGTCACATGAGGCAGGCAGGAGCATTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: VEEARVAAAAVP*SHMRQAGALAC
Trigger: ACAGGCCAATGCTCCTGCCTGCCTCATGTGACTGCACGGGACTGCAGCCGCTGCTACCCTGGCTTCTTCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp AAGGCCAGGTACGGGGCTGTATCTGCGCCAACTTGCTaGACGGTGGCCAACACGCTTTCCGCTTCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: KARYGAVSAPTC*TVANTLSASGS
Trigger: GCTGCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp AGCAAGGCCAGGTACGGGGCTGTATCTGCGCCAACTTaGTGCACGGTGGCCAACACGCTTTCCGCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SKARYGAVSAPT*CTVANTLSASG
Trigger: GCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CTGGCCTCCTGGTGCAGCTTTGTGAGGGGTTCTGTTTaGCGTAGCGTCGCCTGGGCAGCAGTCTGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: LASWCSFVRGSV*RSVAWAAVWRV
Trigger: AACCCTCCAGACTGCTGCCCAGGCGACGCTACGGCAAACAGAACCCCTCACAAAGCTGCACCAGGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 72 bp GCAAGGAGTCTGTCACTGACGGAGTCTGCCTTCCTCTaGAATGCCGCCTGGTCCTTGGGCCGGGGAAACTGC +
Preference number: 6 (lower is better)
Translates to: ARSLSLTESAFL*NAAWSLGRGNC
Trigger: GCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 72 bp CTCTGCAATGCCGCCTGGTCCTTGGGCCGGGGAAACTaGAGCTTCATTCCTGCAAACCCGGCTGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: LCNAAWSLGRGN*SFIPANPAEAS
Trigger: GGAAGCCTCAGCCGGGTTTGCAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS CCA 72 bp TGGGTCGCAGGGCATCTGCTCACTGACCGAGCCCTGTaGGTGACAGCTGCAAGGCATGCATTTGTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: WVAGHLLTDRAL*VTAARHAFVCG
Trigger: CCCGCAGACAAATGCATGCCTTGCAGCTGTCACCCACAGGGCTCGGTCAGTGAGCAGATGCCCTGCGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp AGTCACATGAGGCAGGCAGGAGCATTGGCCTGTCACTaGGTCGCAGGGCATCTGCTCACTGACCGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: SHMRQAGALACH*VAGHLLTDRAL
Trigger: CAGGGCTCGGTCAGTGAGCAGATGCCCTGCGACCCAGTGACAGGCCAATGCTCCTGCCTGCCTCATGTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp TCTAGTGGTCCCCAGGGACTGCCACAGTCGGACCCTTaGAGCCACCCCTCCGTCAAAGTCAGTCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSGPQGLPQSDP*SHPSVKVSLAF
Trigger: GAAGGCCAGACTGACTTTGACGGAGGGGTGGCTCCAAGGGTCCGACTGTGGCAGTCCCTGGGGACCACTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp GGTACGGGGCTGTATCTGCGCCAACTTGCTGCACGGTaGCCAACACGCTTTCCGCTTCAGGCAGCACCTCTG +
Preference number: 6 (lower is better)
Translates to: GTGLYLRQLAAR*PTRFPLQAAPL
Trigger: CAGAGGTGCTGCCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 72 bp CAGCAAGGCCAGGTACGGGGCTGTATCTGCGCCAACTaGCTGCACGGTGGCCAACACGCTTTCCGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: QQGQVRGCICAN*LHGGQHAFRFR
Trigger: CCTGAAGCGGAAAGCGTGTTGGCCACCGTGCAGCAAGTTGGCGCAGATACAGCCCCGTACCTGGCCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 72 bp TCGCAGGGCATCTGCTCACTGACCGAGCCCTGTGGGTaGCAGCTGCAAGGCATGCATTTGTCTGCGGGTCGA +
Preference number: 6 (lower is better)
Translates to: SQGICSLTEPCG*QLQGMHLSAGR
Trigger: TCGACCCGCAGACAAATGCATGCCTTGCAGCTGTCACCCACAGGGCTCGGTCAGTGAGCAGATGCCCTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GAGTCTGTCACTGACGGAGTCTGCCTTCCTCTGCAATaGCGCCTGGTCCTTGGGCCGGGGAAACTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: ESVTDGVCLPLQ*RLVLGPGKLQL
Trigger: AAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 72 bp TCCTTCTCCAGTGAGATACGCGATTCCCGGATCTGCTaGTCCATCTCGCTCAGCCCAGCACCCACCCGCTCA +
Preference number: 6 (lower is better)
Translates to: SFSSEIRDSRIC*SISLSPAPTRS
Trigger: TGAGCGGGTGGGTGCTGGGCTGAGCGAGATGGAGCAGCAGATCCGGGAATCGCGTATCTCACTGGAGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 72 bp ATGTCCTTCTCCAGTGAGATACGCGATTCCCGGATCTaGTGCTCCATCTCGCTCAGCCCAGCACCCACCCGC +
Preference number: 6 (lower is better)
Translates to: MSFSSEIRDSRI*CSISLSPAPTR
Trigger: GCGGGTGGGTGCTGGGCTGAGCGAGATGGAGCAGCAGATCCGGGAATCGCGTATCTCACTGGAGAAGGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp CGGAGTCTGCCTTCCTCTGCAATGCCGCCTGGTCCTTaGGCCGGGGAAACTGCAGCTTCATTCCTGCAAACC +
Preference number: 6 (lower is better)
Translates to: RSLPSSAMPPGP*AGETAASFLQT
Trigger: GGTTTGCAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS CAA 72 bp TGCCTCCTCCTTCACCAGGGCGTAGCAGGACGGACATaGCTGGCAGTGTGTGCCGTCTGCCGTGAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: CLLLHQGVAGRT*LAVCAVCREEE
Trigger: TTCTTCCTCACGGCAGACGGCACACACTGCCAGCAATGTCCGTCCTGCTACGCCCTGGTGAAGGAGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp AACAGCGTTCACAGGATGGGCCCTCGGTATGGTGGCTaGAGACACAGATCCCTGTGTTGGGGTCACAGGTGC +
Preference number: 6 (lower is better)
Translates to: NSVHRMGPRYGG*RHRSLCWGHRC
Trigger: GCACCTGTGACCCCAACACAGGGATCTGTGTCTGCAGCCACCATACCGAGGGCCCATCCTGTGAACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp GTAGCAGGACGGACATTGCTGGCAGTGTGTGCCGTCTaGCGTGAGGAAGAAGTTGTCGTGGCAGCGGTCACA +
Preference number: 6 (lower is better)
Translates to: VAGRTLLAVCAV*REEEVVVAAVT
Trigger: TGTGACCGCTGCCACGACAACTTCTTCCTCACGGCAGACGGCACACACTGCCAGCAATGTCCGTCCTGCTAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CTCTGCAATGCCGCCTGGTCCTTGGGCCGGGGAAACTaGAGCTTCATTCCTTCCAGATCAGCCAGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: LCNAAWSLGRGN*SFIPSRSASRV
Trigger: GACTCTGCTGGCTGATCTGGAAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678544.1
CDS GCA 72 bp ATGAGCACAGAGGGGTCGGCCAGCTACCTCGTGCATTaGTCCCGAATCTCTGTCCAGCTCCCATGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: MSTEGSASYLVH*SRISVQLPWKQ
Trigger: CTGCTTCCATGGGAGCTGGACAGAGATTCGGGAGCAATGCACGAGGTAGCTGGCCGACCCCTCTGTGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 72 bp CCTCTGTGGCCAGGTGGCTCCATTTGGTCGGCTGACTaGGACCTTCCTGAGGAATCTCCAGAGACGCGAGAA +
Preference number: 6 (lower is better)
Translates to: PLWPGGSIWSAD*DLPEESPETRE
Trigger: TTCTCGCGTCTCTGGAGATTCCTCAGGAAGGTCCCAGTCAGCCGACCAAATGGAGCCACCTGGCCACAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp CGGAGTCTGCCTTCCTCTGCAATGCCGCCTGGTCCTTaGGCCGGGGAAACTGCAGCTTCATTCCTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: RSLPSSAMPPGP*AGETAASFLPD
Trigger: ATCTGGAAGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678544.1
CDS CCA 72 bp TCACTGACGGAGTCTGCCTTCCTCTGCAATGCCGCCTaGTCCTTGGGCCGGGGAAACTGCAGCTTCATTCCT +
Preference number: 6 (lower is better)
Translates to: SLTESAFLCNAA*SLGRGNCSFIP
Trigger: AGGAATGAAGCTGCAGTTTCCCCGGCCCAAGGACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp GAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTGCTTaGTCTTCTTTCTCGTGTCTGCAAGGAGTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: EGPRFPASSPPA*SSFSCLQGVCH
Trigger: GTGACAGACTCCTTGCAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS CCA 72 bp GAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTGCTTaGTCTTCTTTCTCGTGTCTTCCAGATCAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: EGPRFPASSPPA*SSFSCLPDQPA
Trigger: TGCTGGCTGATCTGGAAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355452.5
CDS CAA 72 bp AGAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTGCTaGGTCTTCTTTCTCGTGTCTTCCAGATCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: RGAAFPSILSAC*VFFLVSSRSAS
Trigger: GCTGGCTGATCTGGAAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355452.5
CDS CAA 72 bp GATGAGCACAGAGGGGTCGGCCAGCTACCTCGTGCATaGCTCCCGAATCTCTGTCCAGCTCCCATGGAAGCA +
Preference number: 6 (lower is better)
Translates to: DEHRGVGQLPRA*LPNLCPAPMEA
Trigger: TGCTTCCATGGGAGCTGGACAGAGATTCGGGAGCAATGCACGAGGTAGCTGGCCGACCCCTCTGTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CAA 90 bp CTGGAGGAAAGAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTGCTaGGTCTTCTTTCTCGTGTCTGCAAGGAGTCTGTCACTGACGGAG +
Preference number: 6 (lower is better)
Translates to: LEERGAAFPSILSAC*VFFLVSARSLSLTE
Trigger: CTCCGTCAGTGACAGACTCCTTGCAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTCTTTCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS CAA 90 bp GACTGGAGCACCTTGGGGTCCTTGAAGATGTCGTCCCCAAACGTGTaGAGCCGGTCTAGAGAGATGAGGAGTTCGGTGCTGGTGACCCAC +
Preference number: 6 (lower is better)
Translates to: DWSTLGSLKMSSPNV*SRSREMRSSVLVTH
Trigger: GTGGGTCACCAGCACCGAACTCCTCATCTCTCTAGACCGGCTCAACACGTTTGGGGACGACATCTTCAAGGACCCCAAGGTGCTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 90 bp CTTGGGGCTCAGATGACAGTCCTACCAATTTCTAGCTGCGTGGCCTaGAGCAACCCAGCTAACCTCCCTGACCCACACTGCCCCACTGCA +
Preference number: 6 (lower is better)
Translates to: LGAQMTVLPISSCVA*SNPANLPDPHCPTA
Trigger: TGCAGTGGGGCAGTGTGGGTCAGGGAGGTTAGCTGGGTTGCTCAAGGCCACGCAGCTAGAAATTGGTAGGACTGTCATCTGAGCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 72 bp GGATTCACAGAACTGGCCCGTGTAGCCAGTGGGACATaGACAAATCTCCACCCAGGAGGCTGGCGGGGAAAG +
Preference number: 6 (lower is better)
Translates to: GFTELARVASGT*TNLHPGGWRGK
Trigger: CTTTCCCCGCCAGCCTCCTGGGTGGAGATTTGTTCATGTCCCACTGGCTACACGGGCCAGTTCTGTGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 72 bp AGGCTTCCAGATCAGCCAGCAGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCTGGACAGATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: RLPDQPAESWLP*QSLSQPGQMRK
Trigger: CTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTGCTGGCTGATCTGGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678758.1
CDS TCA 72 bp CTGCAAAGTGGGAATGCTTCCCCAGCTCCACAGCCCTaGACTGAGATCTGGGGGCTGGATGGCTTCCGAATG +
Preference number: 6 (lower is better)
Translates to: LQSGNASPAPQP*TEIWGLDGFRM
Trigger: CATTCGGAAGCCATCCAGCCCCCAGATCTCAGTTCAGGGCTGTGGAGCTGGGGAAGCATTCCCACTTTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS GCA 72 bp GAAAGAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTaGTTGGTCTTCTTTCTCGTGTCTGCAAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: ERGAAFPSILSA*LVFFLVSARSL
Trigger: CAGACTCCTTGCAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS GCA 72 bp AGGTCACTCTCGAAGCCCTGGATCTGCAGCTCCTGCTaGTGGGATTCCTGCTCCAGCAGACTGAGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: RSLSKPWICSSC*WDSCSSRLSFL
Trigger: GAGGAAACTCAGTCTGCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS GCA 72 bp GAAAGAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTaGTTGGTCTTCTTTCTCGTGTCTTCCAGATCAGCC +
Preference number: 6 (lower is better)
Translates to: ERGAAFPSILSA*LVFFLVSSRSA
Trigger: GGCTGATCTGGAAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355452.5
CDS CCA 72 bp GAACTTCTCTGGTGCTGTGAGCTCCTCCTCGTCTTCTaGGCTCAGGAGGACCCCATTTGGGCTCCATTGTGG +
Preference number: 6 (lower is better)
Translates to: ELLWCCELLLVF*AQEDPIWAPLW
Trigger: CCACAATGGAGCCCAAATGGGGTCCTCCTGAGCCCAGAAGACGAGGAGGAGCTCACAGCACCAGAGAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp GAGCACAGGATTCACAGAACTGGCCCGTGTAGCCAGTaGGACATGAACAAATCTCCACCCAGGAGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: EHRIHRTGPCSQ*DMNKSPPRRLA
Trigger: CGCCAGCCTCCTGGGTGGAGATTTGTTCATGTCCCACTGGCTACACGGGCCAGTTCTGTGAATCCTGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CCA 72 bp TCACTCTCGAAGCCCTGGATCTGCAGCTCCTGCTGCTaGGATTCCTGCTCCAGCAGACTGAGTTTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: SLSKPWICSSCC*DSCSSRLSFLC
Trigger: GCAGAGGAAACTCAGTCTGCTGGAGCAGGAATCCCAGCAGCAGGAGCTGCAGATCCAGGGCTTCGAGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355452.5
ENST00000361069.9
ENST00000462567.1
ENST00000678544.1
ENST00000678758.1
CDS CAA 72 bp AGAGGGGCCGCGTTTCCCAGCATCCTCTCCGCCTGCTaGGTCTTCTTTCTCGTGTCTGCAAGGAGTCTGTCA +
Preference number: 6 (lower is better)
Translates to: RGAAFPSILSAC*VFFLVSARSLS
Trigger: TGACAGACTCCTTGCAGACACGAGAAAGAAGACCAAGCAGGCGGAGAGGATGCTGGGAAACGCGGCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS CAA 72 bp CTATGTGACAGACTGAGGCTCAGGAAGGGAAAGTCCTaGGCCGAGGTCACAGAGCTGGAGTGGCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LCDRLRLRKGKS*AEVTELEWQSW
Trigger: CCAGCTCTGCCACTCCAGCTCTGTGACCTCGGCCAAGGACTTTCCCTTCCTGAGCCTCAGTCTGTCACATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 72 bp AGGACGGACATTGCTGGCAGTGTGTGCCGTCTGCCGTaGGGAAGAAGTTGTCGTGGCAGCGGTCACATTTGT +
Preference number: 6 (lower is better)
Translates to: RTDIAGSVCRLP*GRSCRGSGHIC
Trigger: ACAAATGTGACCGCTGCCACGACAACTTCTTCCTCACGGCAGACGGCACACACTGCCAGCAATGTCCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS TCA 72 bp TTCCTTCCAGATCAGCCAGCAGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCTGGACAGATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: FLPDQPAESWLP*QSLSQPGQMRK
Trigger: CTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTGCTGGCTGATCTGGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361069.9
ENST00000678544.1
CDS TCA 72 bp TGTCTTCCAGATCAGCCAGCAGAGTCCTGGCTCCCATaGCAGTCACTGTCGCAGCCTGGACAGATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: CLPDQPAESWLP*QSLSQPGQMRK
Trigger: CTTCCTCATCTGTCCAGGCTGCGACAGTGACTGTCATGGGAGCCAGGACTCTGCTGGCTGATCTGGAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355452.5
CDS TCA 72 bp GACCCGGTTCATGCAGAGGTGATGAGTATAAGGCGATaGGCACAGAGGGGTCGGCCAGCTACCTCGTGCATT +
Preference number: 6 (lower is better)
Translates to: DPVHAEVMSIRR*AQRGRPATSCI
Trigger: AATGCACGAGGTAGCTGGCCGACCCCTCTGTGCTCATCGCCTTATACTCATCACCTCTGCATGAACCGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS GCA 72 bp GGTGACAGAGTAAGAGTCTTTGTGAGGGGTTCTGTTTaGCGTAGCGTCGCCTGGGCAGCAGTCTGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: GDRVRVFVRGSV*RSVAWAAVWRV
Trigger: AACCCTCCAGACTGCTGCCCAGGCGACGCTACGGCAAACAGAACCCCTCACAAAGACTCTTACTCTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679272.1
CDS TCA 72 bp TGGTCTTCTTTCTCGTGTCTGCAAGGAGTCTGTCACTaGCGGAGTCTGCCTTCCTCTGCAATGCCGCCTGGT +
Preference number: 6 (lower is better)
Translates to: WSSFSCLQGVCH*RSLPSSAMPPG
Trigger: ACCAGGCGGCATTGCAGAGGAAGGCAGACTCCGTCAGTGACAGACTCCTTGCAGACACGAGAAAGAAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361069.9
ENST00000678544.1
ENST00000678758.1
CDS TCA 72 bp AGTGAGCCGAGATCGCGCCACGCACTCCAGCCTTGGTaGCAGAGTAAGAGTCTTTGTGAGGGGTTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SEPRSRHALQPW*QSKSLCEGFCL
Trigger: CAAACAGAACCCCTCACAAAGACTCTTACTCTGTCACCAAGGCTGGAGTGCGTGGCGCGATCTCGGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679272.1
CDS GCA 72 bp TTCCTGAGGAATCTCCAGAGACGCGAGAATGGCAGCTaGATGCAGAATCTCCTCTTCCGAGGACTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: FLRNLQRRENGS*MQNLLFRGLQH
Trigger: GTGCTGGAGTCCTCGGAAGAGGAGATTCTGCATGCAGCTGCCATTCTCGCGTCTCTGGAGATTCCTCAGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS GCA 72 bp CTTGGGGCTCAGATGACAGTCCTACCAATTTCTAGCTaGGTGGCCTTGAGCAACCCAGCTAACCTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: LGAQMTVLPISS*VALSNPANLPD
Trigger: GTCAGGGAGGTTAGCTGGGTTGCTCAAGGCCACGCAGCTAGAAATTGGTAGGACTGTCATCTGAGCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 72 bp TGGGACCTTCCTGAGGAATCTCCAGAGACGCGAGAATaGCAGCTGCATGCAGAATCTCCTCTTCCGAGGACT +
Preference number: 6 (lower is better)
Translates to: WDLPEESPETRE*QLHAESPLPRT
Trigger: AGTCCTCGGAAGAGGAGATTCTGCATGCAGCTGCCATTCTCGCGTCTCTGGAGATTCCTCAGGAAGGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 72 bp ACCTTGGGGTCCTTGAAGATGTCGTCCCCAAACGTGTaGAGCCGGTCTAGAGAGATGAGGAGTTCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: TLGSLKMSSPNV*SRSREMRSSVL
Trigger: CAGCACCGAACTCCTCATCTCTCTAGACCGGCTCAACACGTTTGGGGACGACATCTTCAAGGACCCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361069.9
CDS CAA 72 bp CAGATGACAGTCCTACCAATTTCTAGCTGCGTGGCCTaGAGCAACCCAGCTAACCTCCCTGACCCACACTGC +
Preference number: 6 (lower is better)
Translates to: QMTVLPISSCVA*SNPANLPDPHC
Trigger: GCAGTGTGGGTCAGGGAGGTTAGCTGGGTTGCTCAAGGCCACGCAGCTAGAAATTGGTAGGACTGTCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 72 bp GAGAACTGTGCAGGTTCTACCTATGACCTAACACCCTaGGTGGTGCTGGAAGCAGAACCTGGGCTCAAACAC +
Preference number: 6 (lower is better)
Translates to: ENCAGSTYDLTP*VVLEAEPGLKH
Trigger: GTGTTTGAGCCCAGGTTCTGCTTCCAGCACCACTCAGGGTGTTAGGTCATAGGTAGAACCTGCACAGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 72 bp CTCGTGCATTGCTCCCGAATCTCTGTCCAGCTCCCATaGAAGCAGCCTCGAAATAACCTAATGGGTGAGTTC +
Preference number: 6 (lower is better)
Translates to: LVHCSRISVQLP*KQPRNNLMGEF
Trigger: GAACTCACCCATTAGGTTATTTCGAGGCTGCTTCCATGGGAGCTGGACAGAGATTCGGGAGCAATGCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 72 bp CCCAGACTTATAGGAGAACTGTGCAGGTTCTACCTATaGCCTAACACCCTGAGTGGTGCTGGAAGCAGAACC +
Preference number: 6 (lower is better)
Translates to: PRLIGELCRFYL*PNTLSGAGSRT
Trigger: GGTTCTGCTTCCAGCACCACTCAGGGTGTTAGGTCATAGGTAGAACCTGCACAGTTCTCCTATAAGTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS GCA 72 bp TCAGGGTTACTGAATCGACACGATGGACCCGGTTCATaGAGAGGTGATGAGTATAAGGCGATGAGCACAGAG +
Preference number: 6 (lower is better)
Translates to: SGLLNRHDGPGS*RGDEYKAMSTE
Trigger: CTCTGTGCTCATCGCCTTATACTCATCACCTCTGCATGAACCGGGTCCATCGTGTCGATTCAGTAACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS GCA 72 bp CCTGAACTGAGATCTGGGGGCTGGATGGCTTCCGAATaGAGAATTTCCCAGACTTATAGGAGAACTGTGCAG +
Preference number: 6 (lower is better)
Translates to: PELRSGGWMASE*RISQTYRRTVQ
Trigger: CTGCACAGTTCTCCTATAAGTCTGGGAAATTCTGCATTCGGAAGCCATCCAGCCCCCAGATCTCAGTTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS TCA 72 bp CGAAATAACCTAATGGGTGAGTTCTATGTGACAGACTaGGGCTCAGGAAGGGAAAGTCCTTGGCCGAGGTCA +
Preference number: 6 (lower is better)
Translates to: RNNLMGEFYVTD*GSGRESPWPRS
Trigger: TGACCTCGGCCAAGGACTTTCCCTTCCTGAGCCTCAGTCTGTCACATAGAACTCACCCATTAGGTTATTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 72 bp GCAGTGGGAGGAGCAAAGATCTCAAATAAGCAGCCTTaGGCATCAATCTGGGTTAGCACTTGTCCCAAATGC +
Preference number: 6 (lower is better)
Translates to: AVGGAKISNKQP*ASIWVSTCPKC
Trigger: GCATTTGGGACAAGTGCTAACCCAGATTGATGCCCAAGGCTGCTTATTTGAGATCTTTGCTCCTCCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678544.1
CDS CCA 72 bp GCAAAGATCTCAAATAAGCAGCCTTGGGCATCAATCTaGGTTAGCACTTGTCCCAAATGCATTTTTATAAGC +
Preference number: 6 (lower is better)
Translates to: AKISNKQPWASI*VSTCPKCIFIS
Trigger: GCTTATAAAAATGCATTTGGGACAAGTGCTAACCCAGATTGATGCCCAAGGCTGCTTATTTGAGATCTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678544.1