RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000091128

Ensembl transcript IDs: ENST00000205386.8, ENST00000388781.8, ENST00000418464.1, ENST00000422975.1, ENST00000471677.5, ENST00000475469.1, ENST00000475572.1

Found 736 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGGCTGAAGACTAGAGTCCATTCCCCACTCTCTCAACATTGTTaGTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCTA +
Preference number: 1 (lower is better)
Translates to: PWLKTRVHSPLSQHC*CQGLHTGIQGLLFL
Trigger: TAGGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTCTAGTCTTCAGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
3UTR TCA 90 bp GTTTCTGAAACCAGAGACAATTTCATTACTTTCCCCTTTCAATTATaGAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTG +
Preference number: 1 (lower is better)
Translates to: VSETRDNFITFPFQL*SGIFLVAFQPPATL
Trigger: CAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTAATGAAATTGTCTCTGGTTTCAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
3UTR-3UTR CCA 90 bp CTTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACCCGCCCCTTCTCAAGTaGCAGCATGGGGAAGACAGC +
Preference number: 2 (lower is better)
Translates to: LAGTPTDTKFCGRTLAEDPPLLK*QHGEDS
Trigger: GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGG...GTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
3UTR-3UTR CCA 90 bp CTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCACAGGCACAGCCTTGTaGTTCCGCCCCTTCTCAAGT +
Preference number: 2 (lower is better)
Translates to: LNIVAAKGSILGSRGSSSTGTAL*FRPFSS
Trigger: ACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGT...GGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
3UTR CAA 90 bp CTAAATACTTTATCCAAAATTATGCCCACGCATGCTTTCTGTTTCTaGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: LNTLSKIMPTHAFCF*LGPRLTPSSVEGPW
Trigger: CCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAGAAACAGAAAGCATGCGTGGGCATAATTTTGGATAAAGTATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
3UTR-3UTR CCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACATCTTAAAAATTAATTaGGGAGGCTGGGCATTGTGG +
Preference number: 2 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYILKIN*GGWALW
Trigger: CCACAATGCCCAGCCTCCCCAATTAATTTTTAAGAT...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
3UTR-3UTR CAA 90 bp CTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCGGAACAGGCACAGCCTaGTGGTTCCGCCCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: LNIVAAKGSILGSRGSSSGTGTA*WFRPFS
Trigger: TGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCC...GGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
3UTR CCA 72 bp AACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTaGCAGCATGGGGAAGACAGCCAAATCAATGTCTCA +
Preference number: 3 (lower is better)
Translates to: NRHSLVVPPLLK*QHGEDSQINVS
Trigger: TGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
3UTR-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCAGAGCCCCAGGGGCTaGTACATCAGAAACCAGAAA +
Preference number: 3 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQQSPRG*YIRNQK
Trigger: TTTCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
3UTR TCA 72 bp CCCACACAATTCTATATAATTCTGTTGAAGGTGGGATaGAACTGGTACCTTCATACTGTACTAATGATCTTA +
Preference number: 3 (lower is better)
Translates to: PTQFYIILLKVG*NWYLHTVLMIL
Trigger: TAAGATCATTAGTACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp CAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCACATCTCTGGCCGCTaGCACCCTCCCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QAQPCGSAPSQVAAWGRQHISGR*HPPGSG
Trigger: GCCGCTGCCGGGAGGGTGTCAGCGGCCAGAGATGTG...CTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCGCCCCTTCCGGCCCGTaGAGAGAGCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSAPSGP*REHRHR
Trigger: CCTGTGGCGGTGCTCTCTGCACGGGCCGGAAGGGGC...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGATTGGAGGGCATTCGTTaGGAGGGTCAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGLEGIR*EGQGAV
Trigger: CACGGCTCCCTGACCCTCTCAACGAATGCCCTCCAA...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCCCGGCAGCGGCACATaGCTGTGTCTGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSPGSGT*LCLDHR
Trigger: TCTGTGATCCAGACACAGGCATGTGCCGCTGCCGGG...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp GCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCACAGCGATCACATCTCTaGCCGCTGACACCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ALWFRPFSSGSMGKTAKSQRSHL*PLTPSR
Trigger: CCGGGAGGGTGTCAGCGGCCAGAGATGTGATCGCTG...TGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCCACAGGCCAGGCCTGTaGCATTCGGCAGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLVVPPLLKWQHGEDSQIHRPGL*HSADKD
Trigger: GTCCTTGTCTGCCGAATGTCACAGGCCTGGCCTGTG...GATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCACATCTCTGGCCGCTaGCACCCTCCCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGHISGR*HPPGSG
Trigger: GCCGCTGCCGGGAGGGTGTCAGCGGCCAGAGATGTG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAGCAGAGCTGGCAGTTTaGGCCCTGAGTGTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGAELAV*ALSVVQ
Trigger: TTGCACAACACTCAGGGCGCAAACTGCCAGCTCTGC...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGCCCCTTCCGGCCCGTaGAGAGAGCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGAPSGP*REHRHR
Trigger: CCTGTGGCGGTGCTCTCTGCACGGGCCGGAAGGGGC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp CGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTAGAGTCCATTCCCCCCTACACTTCCTGTaGCCCTTCCGGCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: RLTPSSVEGPWLKTRVHSPLHFL*PFRPVQ
Trigger: CTGCACGGGCCGGAAGGGGCACAGGAAGTGTAGGGG...GGAATGGACTCTAGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp GCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCACAGGGGGACACTCCATaGGACTCACGCCGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: ALWFRPFSSGSMGKTAKSQGDTP*DSRRKH
Trigger: ATGCTTCCGGCGTGAGTCCCATGGAGTGTCCCCCTG...TGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCACACACGCCCCCGCTaGGGCCACCGCTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGHTRPR*GHRLPG
Trigger: ACCTGGCAAGCGGTGGCCTCAGCGGGGGCGTGTGTG...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACACACACGCCCCCGCTaGGGCCACCGCTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVHTRPR*GHRLPG
Trigger: ACCTGGCAAGCGGTGGCCTCAGCGGGGGCGTGTGTG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCTGGCAGTTTGCGCCCTaGGTGTTGTGCAAACATCGA +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSWQFAP*VLCKHR
Trigger: TCGATGTTTGCACAACACTCAGGGCGCAAACTGCCA...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGATCACAGTGGCTACTTTaGGAGGTCCTAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGSQWLL*EVLGSQ
Trigger: CTGTGACCCTAGGACCTCTCAAAGTAGCCACTGTGA...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCACATCTCTGGCCGCTaGCACCCTCCCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLHISGR*HPPGSG
Trigger: GCCGCTGCCGGGAGGGTGTCAGCGGCCAGAGATGTG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGACCTGAACTTTCGCATTaGCAGCGTGGTCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGPELSH*QRGLDA
Trigger: GGCATCAAGACCACGCTGTCAATGCGAAAGTTCAGG...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCGGTCTGATTGAGGGCTaGTCCATAGTGACCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSGLIEG*SIVTWF
Trigger: AAACCAGGTCACTATGGATCAGCCCTCAATCAGACC...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp CTTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTGGGCAGATTCAGCCTaGACTTTCGCATTGACAGCG +
Preference number: 4 (lower is better)
Translates to: LAGTPTDTKFCGRTLAEDWADSA*TFALTA
Trigger: CGCTGTCAATGCGAAAGTTCAGGCTGAATCTGCCCA...GTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp TTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTTGGAAGGACCCTGGCTaGAGACTAGAGTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LLGPRLTPSSVEGPWLKTWKDPG*RLESIP
Trigger: GGGAATGGACTCTAGTCTTCAGCCAGGGTCCTTCCA...AGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGATCTCAACATTGTTGCTaGCAAGGGCTCCATACTGGG +
Preference number: 4 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGSQHCC*QGLHTG
Trigger: CCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGA...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTACAGTCGCAGGGCTaGCAGCCCAGGGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGLQSQG*QPRGSV
Trigger: CACCGACCCCCTGGGCTGCCAGCCCTGCGACTGTAA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGACCTGTTACAATCACATaGAATGCATCGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGPVTIT*NASPRW
Trigger: CCACCTGGGCGATGCATTCCATGTGATTGTAACAGG...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp TCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTCCAAGGGCTCCATACTaGGATCCAGGGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLNIVAAKGSILGSRGSSPRAPY*DPGAPL
Trigger: AAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGG...AGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATGCTGGGACCCCGACTaGCACCAAGTTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGCWDPD*HQVLWK
Trigger: CTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCA...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGACCCCTGTTACCCGGCTaGAGGACTCTGGATCGGTTA +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGPLLPG*RTLDRL
Trigger: TAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGG...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCGAGGTCTTTGAAGTCTaGCTCACAGACAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLVVPPLLKWQHGEDSQIEVFEV*LTDRQG
Trigger: ACCCTGCCTGTCTGTGAGGCAGACTTCAAAGACCTC...GATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCGGAGTCCGCAATGCTTaGATTAAGGACACTGGATTG +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSGVRNA*IKDTGL
Trigger: CAATCCAGTGTCCTTAATGCAAGCATTGCGGACTCC...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCCCCTACACTTCCTGTaGCCCTTCCGGCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQPLHFL*PFRPVQ
Trigger: CTGCACGGGCCGGAAGGGGCACAGGAAGTGTAGGGG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCAGCCCAGGGGGTCGGTaGCGCTTAGTCCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGSPGGR*RLVRSG
Trigger: ACCACTACGGACTAAGCGCCACCGACCCCCTGGGCT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCACTCACGCCGGAAGCATaGCAGGAGCATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PFPTLSTLLLPRAPYWDPLTPEA*QEHLLQ
Trigger: CTGCAGAAGATGCTCCTGCCATGCTTCCGGCGTGAG...TGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCGCACATGCCTGTGTCTaGATCACAGATGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLVVPPLLKWQHGEDSQIAHACV*ITDGLL
Trigger: CAGAAGCCCATCTGTGATCCAGACACAGGCATGTGC...GATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCAGCGATCACATCTCTaGCCGCTGACACCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGQRSHL*PLTPSR
Trigger: CCGGGAGGGTGTCAGCGGCCAGAGATGTGATCGCTG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGTGGAGAGGGAAGAAATaGTGTGGTCCCACTGATCAA +
Preference number: 4 (lower is better)
Translates to: QAQPCGSAPSQVAAWGRQWRGKK*CGPTDQ
Trigger: TTGATCAGTGGGACCACACCATTTCTTCCCTCTCCA...CTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp CTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCGCTTCCTGGGCTTTTTaGAGGGCATTCGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LNIVAAKGSILGSRGSSSASWAF*RAFVER
Trigger: CCTCTCAACGAATGCCCTCCAAAAAGCCCAGGAAGC...GGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGCACCCGGGAGCACTTaGGGTCCCATTGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRAPGST*GPIAEA
Trigger: TGCCTCAGCAATGGGACCTCAAGTGCTCCCGGGTGC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGCACCCGGGAGCACTTaGGGTCCCATTGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVAPGST*GPIAEA
Trigger: TGCCTCAGCAATGGGACCTCAAGTGCTCCCGGGTGC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGCAGCTGGATCCGACTaGGCCCTGGGGGTGACACTT +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLAAGSD*ALGVTL
Trigger: AAGTGTCACCCCCAGGGCTCAGTCGGATCCAGCTGC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp CGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTAGAGTCCATTCCAGGGTCACAGTCACATaGCTGACATCCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLTPSSVEGPWLKTRVHSRVTVT*LTSSAR
Trigger: CCTGGCAGAGGATGTCAGTCATGTGACTGTGACCCT...GGAATGGACTCTAGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGATTTCTTGATGTTTTCTaGGGAGTCCGCAATGCTTGC +
Preference number: 4 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGFLDVF*GVRNAC
Trigger: GCAAGCATTGCGGACTCCTCAGAAAACATCAAGAAA...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGAGGGCATTCGTTaGGAGGGTCAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGLEGIR*EGQGAV
Trigger: CACGGCTCCCTGACCCTCTCAACGAATGCCCTCCAA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTTTGACAGCGTGGTCTTaGTGCCTTTGCAACTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLGPRLTPSSVEGPWLKTLTAWS*CLCNLV
Trigger: GACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAA...AGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACTGCAGCGGTCGCAGTaGTGCCCCTCAGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRLQRSQ*CPSVLC
Trigger: GCACAACACTGAGGGGCAGCACTGCGACCGCTGCAG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGGCCTCCAAGTCGGCTaGAGCTGGATCCGACTGAGC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGGLQVG*SWIRLS
Trigger: GCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGGCCTCCAAGTCGGCTaGAGCTGGATCCGACTGAGC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQGLQVG*SWIRLS
Trigger: GCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp CTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCATGACTGACATCCTCTaGCAGGGACCAGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: LNIVAAKGSILGSRGSSSMTDIL*QGPDSS
Trigger: ACTGGAATCTGGTCCCTGGCAGAGGATGTCAGTCAT...GGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp TCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCTTTTCCTGGCACTCACTaGAACGTTTCCCGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: STLLLPRAPYWDPGAPLPFPGTH*NVSRRN
Trigger: GTTACGGCGGGAAACGTTGCAGTGAGTGCCAGGAAA...AGGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCCCGGCAGCGGCACATaGCTGTGTCTGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGPGSGT*LCLDHR
Trigger: TCTGTGATCCAGACACAGGCATGTGCCGCTGCCGGG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGCCCCTTCCGGCCCGTaGAGAGAGCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSAPSGP*REHRHR
Trigger: CCTGTGGCGGTGCTCTCTGCACGGGCCGGAAGGGGC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATTACAGTCGCAGGGCTaGCAGCCCAGGGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSLQSQG*QPRGSV
Trigger: CACCGACCCCCTGGGCTGCCAGCCCTGCGACTGTAA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACAAGTCGGCTGCAGCTaGATCCGACTGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRQVGCS*IRLSPG
Trigger: CCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTTCACAGATGGGCTTCTaGGTACCTGCCCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: LLGPRLTPSSVEGPWLKTSQMGF*VPALLQ
Trigger: TTGTAACAGGGCAGGTACCCAGAAGCCCATCTGTGA...AGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCAGCGATCACATCTCTaGCCGCTGACACCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLQRSHL*PLTPSR
Trigger: CCGGGAGGGTGTCAGCGGCCAGAGATGTGATCGCTG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCATGGATTTTGCTTCCTaGGCTTTTTGGAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSMDFAS*AFWRAF
Trigger: GAATGCCCTCCAAAAAGCCCAGGAAGCAAAATCCAT...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp TTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTGATGCCTTTGCAACTTaGTCTGCAGCAGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLGPRLTPSSVEGPWLKTDAFAT*SAAGKV
Trigger: GACTTTCCCTGCTGCAGACCAAGTTGCAAAGGCATC...AGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTCACCAGTGGTGGGATaGCAGGCACCCCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLSPVVG*QAPLLQ
Trigger: CTGCAACAGGGGTGCCTGTCATCCCACCACTGGTGA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATCACCAGTGGTGGGATaGCAGGCACCCCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVSPVVG*QAPLLQ
Trigger: CTGCAACAGGGGTGCCTGTCATCCCACCACTGGTGA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGCACGCGTAGGGATCTaGGATGGTCTTGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLARVGI*DGLERV
Trigger: GACCCGCTCAAGACCATCTCAGATCCCTACGCGTGC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAGCAGCTACGGCCAGTaGCATGTGGGCGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLSSYGQ*HVGGIH
Trigger: GTGAATGCCGCCCACATGTCACTGGCCGTAGCTGCT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAAGCAGCTACGGCCAGTaGCATGTGGGCGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVSSYGQ*HVGGIH
Trigger: GTGAATGCCGCCCACATGTCACTGGCCGTAGCTGCT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATAAGGACATGCACCAGTaGCAGGGTCACAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SPFPTLSTLLLPRAPYWDKDMHQ*QGHRGK
Trigger: CTTGCCTCTGTGACCCTGTCACTGGTGCATGTCCTT...ATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCACAGGCCAGGCCTGTaGCATTCGGCAGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGHRPGL*HSADKD
Trigger: GTCCTTGTCTGCCGAATGTCACAGGCCTGGCCTGTG...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTTGGAGGGCATTCGTTaGGAGGGTCAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLLEGIR*EGQGAV
Trigger: CACGGCTCCCTGACCCTCTCAACGAATGCCCTCCAA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGTTGTCCTGGAGGTCTaGAGCTGGCCTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRVVLEV*SWPPRS
Trigger: GCTCCTTGGAGGCCAGCTGCAGACCTCCAGGACAAC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGTTGTCCTGGAGGTCTaGAGCTGGCCTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQVVLEV*SWPPRS
Trigger: GCTCCTTGGAGGCCAGCTGCAGACCTCCAGGACAAC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGCTGAGGCCACCGCTTaGCAGGTACGTAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGAEATA*QVRSHV
Trigger: GACATGACTACGTACCTGGCAAGCGGTGGCCTCAGC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATGTAGAAGAGGGGTCTaGAGCGGTCGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVCRRGV*SGRSAA
Trigger: GGCAGCACTGCGACCGCTGCAGACCCCTCTTCTACA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCCTGGGGGTGACACTTaGAGGCCACAGCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQPGGDT*RPQPHH
Trigger: ATGATGGGGCTGTGGCCTGCAAGTGTCACCCCCAGG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCCCCTGTTACCCGGCTaGAGGACTCTGGATCGGTTA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGPLLPG*RTLDRL
Trigger: TAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGACATAGTGACCTGGTTTaGAGAGCTGGCAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGHSDLV*RAGSLR
Trigger: GCGCAAACTGCCAGCTCTGCAAACCAGGTCACTATG...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCCCGGCAGCGGCACATaGCTGTGTCTGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQPGSGT*LCLDHR
Trigger: TCTGTGATCCAGACACAGGCATGTGCCGCTGCCGGG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp CGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTAGAGTCCATTCCTCCAGCCCTGATCGCTaGTTTGCTAACTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLTPSSVEGPWLKTRVHSSSPDR*FANSSS
Trigger: TGAGCTGGAGTTAGCAAAGCAGCGATCAGGGCTGGA...GGAATGGACTCTAGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGGAGATCACCAGTGGTaGGATGACAGGCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGGDHQW*DDRHPC
Trigger: ACAGGGGTGCCTGTCATCCCACCACTGGTGATCTCC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCTGCAAGCGTTGTCCTaGAGGTCTGCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLLQALS*RSAAGL
Trigger: GAGGCCAGCTGCAGACCTCCAGGACAACGCTTGCAG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGACGGCCAGTGACATGTaGGCGGCATTCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLTASDM*AAFTLP
Trigger: GGGCAGTGTGAATGCCGCCCACATGTCACTGGCCGT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACCCCAGGGAGAACCCTaGCAAATCCAGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVPQGEP*QIQVQS
Trigger: GGACTGGACCTGGATTTGCCAGGGTTCTCCCTGGGG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCCCGGCTGCAGGACTCTaGATCGGTTACATCTATGTT +
Preference number: 4 (lower is better)
Translates to: VVPPLLKWQHGEDSQINVPAAGL*IGYIYV
Trigger: AACATAGATGTAACCGATCCAGAGTCCTGCAGCCGG...GACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCAGGGGGACACTCCATaGGACTCACGCCGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLQGDTP*DSRRKH
Trigger: ATGCTTCCGGCGTGAGTCCCATGGAGTGTCCCCCTG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAAATTTACACGGACACTaGCCTGTAAGCTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ALWFRPFSSGSMGKTAKSNLHGH*PVSWSQ
Trigger: CTGTGACCAGCTTACAGGCCAGTGTCCGTGTAAATT...TGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGCACGCGTAGGGATCTaGGATGGTCTTGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSARVGI*DGLERV
Trigger: GACCCGCTCAAGACCATCTCAGATCCCTACGCGTGC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTGCTCCGGTGACATATaGCAGGCACAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGCSGDI*QAQALA
Trigger: GGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCGCAGTGTGCTCCGGTaGCATATGACAGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLRSVLR*HMTGTS
Trigger: GCTTGTGCCTGTCATATGTCACCGGAGCACACTGCG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACGCAGTGTGCTCCGGTaGCATATGACAGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVRSVLR*HMTGTS
Trigger: GCTTGTGCCTGTCATATGTCACCGGAGCACACTGCG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGTCCACCAGGACATGTaGATGAGCGTGGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRVHQDM*MSVGLS
Trigger: GGAGAGTCCCACGCTCATTCACATGTCCTGGTGGAC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGTCCACCAGGACATGTaGATGAGCGTGGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLVHQDM*MSVGLS
Trigger: GGAGAGTCCCACGCTCATTCACATGTCCTGGTGGAC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATTCTGCAGGTCTGATTaGGGGCTGATCCATAGTGAC +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGFCRSD*GLIHSD
Trigger: GTCACTATGGATCAGCCCTCAATCAGACCTGCAGAA...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp GCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCATTGCCCGTCCTTGAGTaGTTTGAGCTTGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: ALWFRPFSSGSMGKTAKSLPVLE*FELVVT
Trigger: AGTTACAACAAGCTCAAATCACTCAAGGACGGGCAA...TGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGCTGAGGCCACCGCTTaGCAGGTACGTAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLAEATA*QVRSHV
Trigger: GACATGACTACGTACCTGGCAAGCGGTGGCCTCAGC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATGTAGAAGAGGGGTCTaGAGCGGTCGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSCRRGV*SGRSAA
Trigger: GGCAGCACTGCGACCGCTGCAGACCCCTCTTCTACA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGGGCGGCATTCACACTaGCCATTCTTGGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGGRHSH*PFLGEH
Trigger: GTGCTCACCCAAGAATGGGCAGTGTGAATGCCGCCC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGCCACAGCCCCATCATaGAGCTTGGCAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLATAPS*SLADML
Trigger: CAGCATGTCTGCCAAGCTGCATGATGGGGCTGTGGC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACCTGGGGGTGACACTTaGAGGCCACAGCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSPGGDT*RPQPHH
Trigger: ATGATGGGGCTGTGGCCTGCAAGTGTCACCCCCAGG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGCAGAGCTGGCAGTTTaGGCCCTGAGTGTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGAELAV*ALSVVQ
Trigger: TTGCACAACACTCAGGGCGCAAACTGCCAGCTCTGC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCAGTCTCATTAACCCTTaGACCGCTTTGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VVPPLLKWQHGEDSQINVSLINP*TALERE
Trigger: TTCCCTCTCCAAAGCGGTGCAAGGGTTAATGAGACT...GACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCCCCTACACTTCCTGTaGCCCTTCCGGCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSPLHFL*PFRPVQ
Trigger: CTGCACGGGCCGGAAGGGGCACAGGAAGTGTAGGGG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCACGAATAATGGATTTTaGTTCCTGGGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSTNNGF*FLGFLE
Trigger: CTCCAAAAAGCCCAGGAAGCAAAATCCATTATTCGT...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp CTTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTGTAATGGTAGAGTTTaGCCGTCCTTGAGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LAGTPTDTKFCGRTLAEDCNGRV*PSLSDL
Trigger: CAAATCACTCAAGGACGGGCAAACTCTACCATTACA...GTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp CCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCACTTTGCAACTTGGTCTaGAGCAGGGAAAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: PFPTLSTLLLPRAPYWDPLCNLV*SRESPS
Trigger: GGATGGACTTTCCCTGCTGCAGACCAAGTTGCAAAG...TGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGGAGATCACCAGTGGTaGGATGACAGGCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQGDHQW*DDRHPC
Trigger: ACAGGGGTGCCTGTCATCCCACCACTGGTGATCTCC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACCAGGAGATCACCAGTaGTGGGATGACAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSPGDHQ*WDDRHP
Trigger: GGGGTGCCTGTCATCCCACCACTGGTGATCTCCTGG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCCACTCCCTGGGCCTaGCCAGATGTGATGTTAGGA +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGPTPWA*PDVMLG
Trigger: TCCTAACATCACATCTGGCCAGGCCCAGGGAGTGGG...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCCCACTCCCTGGGCCTaGCCAGATGTGATGTTAGGA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQPTPWA*PDVMLG
Trigger: TCCTAACATCACATCTGGCCAGGCCCAGGGAGTGGG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGGTTTACACTGGCACTaGCCTCCAAGTCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQGLHWH*PPSRLQ
Trigger: CTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAACC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACCAGACACCTCTCCATaGCAGGGGCACTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRPDTSP*QGHCPV
Trigger: AACAGGACAGTGCCCCTGCCATGGAGAGGTGTCTGG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCCAGACACCTCTCCATaGCAGGGGCACTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLPDTSP*QGHCPV
Trigger: AACAGGACAGTGCCCCTGCCATGGAGAGGTGTCTGG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACAGGGGGACACTCCATaGGACTCACGCCGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSQGDTP*DSRRKH
Trigger: ATGCTTCCGGCGTGAGTCCCATGGAGTGTCCCCCTG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTCATTTTTCAAGACTCCCAGCCTaGTGTTGGGCAGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: RPFSSGSMGKTAKSMSHFSRLPA*CWADSA
Trigger: GGCTGAATCTGCCCAACACCAGGCTGGGAGTCTTGA...AAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCCCCTCCAGGTAACTaGGGATGCAGTATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGPPPGN*GCSISG
Trigger: CCCAGAAATACTGCATCCTCAGTTACCTGGAGGGGG...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACCACACACGCCCCCGCTaGGGCCACCGCTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYHTRPR*GHRLPG
Trigger: ACCTGGCAAGCGGTGGCCTCAGCGGGGGCGTGTGTG...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGACCAGGACATGTGAATaGGCGTGGGACTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQTRTCE*AWDSPC
Trigger: GCAAGGAGAGTCCCACGCTCATTCACATGTCCTGGT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGCAGCTGGATCCGACTaGGCCCTGGGGGTGACACTT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSAAGSD*ALGVTL
Trigger: AAGTGTCACCCCCAGGGCTCAGTCGGATCCAGCTGC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGAAGGACATGCACCAGTaGCAGGGTCACAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGKDMHQ*QGHRGK
Trigger: CTTGCCTCTGTGACCCTGTCACTGGTGCATGTCCTT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGAAGGACATGCACCAGTaGCAGGGTCACAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQKDMHQ*QGHRGK
Trigger: CTTGCCTCTGTGACCCTGTCACTGGTGCATGTCCTT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAGGGTCACAGTCACATaGCTGACATCCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLRVTVT*LTSSAR
Trigger: CCTGGCAGAGGATGTCAGTCATGTGACTGTGACCCT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCTGTGATAATATTTCTTaGTGTTTTCTGAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RHSLVVPPLLKWQHGEDSCDNIS*CFLRSP
Trigger: CGGACTCCTCAGAAAACATCAAGAAATATTATCACA...GCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCCTGAACTTTCGCATTaGCAGCGTGGTCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGPELSH*QRGLDA
Trigger: GGCATCAAGACCACGCTGTCAATGCGAAAGTTCAGG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTACAGCTGCACGATCTaGAAGCGTTGTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGYSCTI*KRCPGG
Trigger: ACCTCCAGGACAACGCTTGCAGATCGTGCAGCTGTA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATGCCCCTCAGTGTTGTaGTGGCAGTCTTCACACACG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVCPSVL*WQSSHT
Trigger: CGTGTGTGAAGACTGCCAGCACAACACTGAGGGGCA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCTGCAGCGGTCGCAGTaGTGCCCCTCAGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLQRSQ*CPSVLC
Trigger: GCACAACACTGAGGGGCAGCACTGCGACCGCTGCAG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCGTAGTGGTTGGGTTTaGACTGGTCGCATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGRSGWV*TGRIWL
Trigger: GAGCCAAATGCGACCAGTGCAAACCCAACCACTACG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGGGCGGCATTCACACTaGCCATTCTTGGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSGRHSH*PFLGEH
Trigger: GTGCTCACCCAAGAATGGGCAGTGTGAATGCCGCCC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGCCACAGCCCCATCATaGAGCTTGGCAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSATAPS*SLADML
Trigger: CAGCATGTCTGCCAAGCTGCATGATGGGGCTGTGGC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACCCCTGTTACCCGGCTaGAGGACTCTGGATCGGTTA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSPLLPG*RTLDRL
Trigger: TAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTTCCTGGCACTCACTaGAACGTTTCCCGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGFPGTH*NVSRRN
Trigger: GTTACGGCGGGAAACGTTGCAGTGAGTGCCAGGAAA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp CCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCATACAATCACATGGAATaGATCGCCCAGGTGGATCAC +
Preference number: 4 (lower is better)
Translates to: PFPTLSTLLLPRAPYWDPYNHME*IAQVDH
Trigger: GTGATCCACCTGGGCGATGCATTCCATGTGATTGTA...TGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTCCAGCCCTGATCGCTaGTTTGCTAACTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGSSPDR*FANSSS
Trigger: TGAGCTGGAGTTAGCAAAGCAGCGATCAGGGCTGGA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGACTCTCTCAACATTGTTaGTGCCAAGGGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGLSQHC*CQGLHT
Trigger: AGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAG...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCCAGGGGGTCGGTaGCGCTTAGTCCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSSPGGR*RLVRSG
Trigger: ACCACTACGGACTAAGCGCCACCGACCCCCTGGGCT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGGGTTCACCACAATCTaGACAGTCCAGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGGFTTI*TVQSAA
Trigger: TGCAGCTGACTGGACTGTCCAGATTGTGGTGAACCC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCAAGTCGGCTGCAGCTaGATCCGACTGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSQVGCS*IRLSPG
Trigger: CCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCACAAGAGGTTTACACTaGCACTGGCCTCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGTRGLH*HWPPSR
Trigger: CCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTGT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAGGATGGCAGTGACATaGGTGACAGCCGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSRMAVT*VTAVMP
Trigger: GGGCATCACGGCTGTCACCCATGTCACTGCCATCCT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATGTCTGGATCACAGATaGGCTTCTGGGTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRCLDHR*ASGYLP
Trigger: GGGCAGGTACCCAGAAGCCCATCTGTGATCCAGACA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAACATGGCACATTTCCTaGATCTCCGCACACCTTTTC +
Preference number: 4 (lower is better)
Translates to: PFPTLSTLLLPRAPYWDPTWHIS*ISAHLF
Trigger: GAAAAGGTGTGCGGAGATCCAGGAAATGTGCCATGT...TGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp GCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCATTCACCAAAAGCTTTTaGGCTCCATCTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ALWFRPFSSGSMGKTAKSFTKSF*APSASS
Trigger: TGAAGAAGCAGATGGAGCCCAAAAGCTTTTGGTGAA...TGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATCAAGACTCCCAGCCTaGTGTTGGGCAGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVSRLPA*CWADSA
Trigger: GGCTGAATCTGCCCAACACCAGGCTGGGAGTCTTGA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTCAAGACTCCCAGCCTaGTGTTGGGCAGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQSRLPA*CWADSA
Trigger: GGCTGAATCTGCCCAACACCAGGCTGGGAGTCTTGA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGTAGTCATGTCAAAGTaGCAGCGGCTGGAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLVVMSK*QRLEWL
Trigger: TAGCCACTCCAGCCGCTGTCACTTTGACATGACTAC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGATCTGAGATGGTCTTaGGCGGGTCCCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLDLRWS*AGPCRR
Trigger: TCTTCTACAGGGACCCGCTCAAGACCATCTCAGATC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGATCTGAGATGGTCTTaGGCGGGTCCCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQDLRWS*AGPCRR
Trigger: TCTTCTACAGGGACCCGCTCAAGACCATCTCAGATC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGAACACCCATGGAGATaGTTTCCCAGGCCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETREHPWR*FPRPQY
Trigger: ATACTGGGGCCTGGGAAATCATCTCCATGGGTGTTC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGATCATAGCTTCCAGTTaGGCACCTGTCACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGIIASS*APVTAA
Trigger: CGCTGCTGTGACAGGTGCTCAACTGGAAGCTATGAT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTGGCAGTTTGCGCCCTaGGTGTTGTGCAAACATCGA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQWQFAP*VLCKHR
Trigger: TCGATGTTTGCACAACACTCAGGGCGCAAACTGCCA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCACAGGCCAGGCCTGTaGCATTCGGCAGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSHRPGL*HSADKD
Trigger: GTCCTTGTCTGCCGAATGTCACAGGCCTGGCCTGTG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTCACAGTGGCTACTTTaGGAGGTCCTAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLSQWLL*EVLGSQ
Trigger: CTGTGACCCTAGGACCTCTCAAAGTAGCCACTGTGA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp CCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCATTCATTTCCCTGGTTTaGTTTTCAGCCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: PFPTLSTLLLPRAPYWDPFISLV*FSACST
Trigger: TGTGCTGCAGGCTGAAAATCAAACCAGGGAAATGAA...TGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATGGGCAGATTCAGCCTaGACTTTCGCATTGACAGCG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRWADSA*TFALTA
Trigger: CGCTGTCAATGCGAAAGTTCAGGCTGAATCTGCCCA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTGGGCAGATTCAGCCTaGACTTTCGCATTGACAGCG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLWADSA*TFALTA
Trigger: CGCTGTCAATGCGAAAGTTCAGGCTGAATCTGCCCA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp CTTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACATTTTTCTATCTTGCTaGGTTCTGAAAACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LAGTPTDTKFCGRTLAEDIFLSC*VLKTAC
Trigger: ACAGGCTGTTTTCAGAACTCAGCAAGATAGAAAAAT...GTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTCTCCCCGCATCTTCTaGATAGGGCGACATTCGCTA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQSPRIF*IGRHSL
Trigger: TAGCGAATGTCGCCCTATGCAGAAGATGCGGGGAGA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTACAGCTGCACGATCTaGAAGCGTTGTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGYSCTI*KRCPGG
Trigger: ACCTCCAGGACAACGCTTGCAGATCGTGCAGCTGTA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCGTAGTGGTTGGGTTTaGACTGGTCGCATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLRSGWV*TGRIWL
Trigger: GAGCCAAATGCGACCAGTGCAAACCCAACCACTACG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGTAGAGTCTTGGGTATaGAGTGCTCACTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGVESWV*SAHSLQ
Trigger: CTGGAGGGAGTGAGCACTGCATACCCAAGACTCTAC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGTAGAGTCTTGGGTATaGAGTGCTCACTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLVESWV*SAHSLQ
Trigger: CTGGAGGGAGTGAGCACTGCATACCCAAGACTCTAC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGCAGAGCTGGCAGTTTaGGCCCTGAGTGTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSAELAV*ALSVVQ
Trigger: TTGCACAACACTCAGGGCGCAAACTGCCAGCTCTGC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATAGTGACCTGGTTTaGAGAGCTGGCAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVHSDLV*RAGSLR
Trigger: GCGCAAACTGCCAGCTCTGCAAACCAGGTCACTATG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGGGCTTCTGGGTACCTaGCCTGTTACAATCACATGG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLGLLGT*PVTITW
Trigger: CCATGTGATTGTAACAGGGCAGGTACCCAGAAGCCC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGAGGTCTTTGAAGTCTaGCTCACAGACAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVEVFEV*LTDRQG
Trigger: ACCCTGCCTGTCTGTGAGGCAGACTTCAAAGACCTC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTCCAGCCCTGATCGCTaGTTTGCTAACTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLSSPDR*FANSSS
Trigger: TGAGCTGGAGTTAGCAAAGCAGCGATCAGGGCTGGA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCCAGGAGATCACCAGTaGTGGGATGACAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSPGDHQ*WDDRHP
Trigger: GGGGTGCCTGTCATCCCACCACTGGTGATCTCCTGG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAAGGATGCAGTATTTCTaGGCTCTGCTCAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVRMQYF*ALLSPQ
Trigger: CTGTGGGCTGAGCAGAGCCCAGAAATACTGCATCCT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAGGATGCAGTATTTCTaGGCTCTGCTCAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRRMQYF*ALLSPQ
Trigger: CTGTGGGCTGAGCAGAGCCCAGAAATACTGCATCCT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACAAAGTGACAGCGGCTaGAGTGGCTATTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRQSDSG*SGYYSC
Trigger: GCAGCTGTAATAGCCACTCCAGCCGCTGTCACTTTG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTGCACTGGTCGCATTTaGCTCCTTCCACGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGCTGRI*LLPRSL
Trigger: AAGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTGGTTGGGTTTGCACTaGTCGCATTTGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLWLGLH*SHLAPS
Trigger: GGAAGGAGCCAAATGCGACCAGTGCAAACCCAACCA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATTACAGTCGCAGGGCTaGCAGCCCAGGGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSLQSQG*QPRGSV
Trigger: CACCGACCCCCTGGGCTGCCAGCCCTGCGACTGTAA...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCACGGCCAGTGACATGTaGGCGGCATTCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSTASDM*AAFTLP
Trigger: GGGCAGTGTGAATGCCGCCCACATGTCACTGGCCGT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGTCCTTGGAGTGTTGTaGCTTCCTCTGCCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRVLGVL*LPLPRR
Trigger: TCTACGAGGCAGAGGAAGCCACAACACTCCAAGGAC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAAAGGCGCCAGTCCTTaGAGTGTTGTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRKGASP*SVVASS
Trigger: AGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAAAAGGCGCCAGTCCTTaGAGTGTTGTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVKGASP*SVVASS
Trigger: AGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGGGTTCACCACAATCTaGACAGTCCAGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGGFTTI*TVQSAA
Trigger: TGCAGCTGACTGGACTGTCCAGATTGTGGTGAACCC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGACAAGAGGTTTACACTaGCACTGGCCTCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQTRGLH*HWPPSR
Trigger: CCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTGT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGGCAAGGGTGGCAGCTaGGAAATCCAAAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSGKGGS*EIQSSL
Trigger: CAGGCTACTTTGGATTTCCCAGCTGCCACCCTTGCC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATGTCTGGATCACAGATaGGCTTCTGGGTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSCLDHR*ASGYLP
Trigger: GGGCAGGTACCCAGAAGCCCATCTGTGATCCAGACA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGCACATGCCTGTGTCTaGATCACAGATGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRAHACV*ITDGLL
Trigger: CAGAAGCCCATCTGTGATCCAGACACAGGCATGTGC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGCACATGCCTGTGTCTaGATCACAGATGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVAHACV*ITDGLL
Trigger: CAGAAGCCCATCTGTGATCCAGACACAGGCATGTGC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCACCCTTGCACCGCTTTaGAGAGGGAAGAAATGGTGT +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGTLAPL*RGKKWC
Trigger: ACACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTCATTTTACCCTTGCACCGCTTTaGAGAGGGAAGAAATGGTGT +
Preference number: 4 (lower is better)
Translates to: RPFSSGSMGKTAKSMSHFTLAPL*RGKKWC
Trigger: ACACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGT...AAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp TCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCTCTTTCTCAGCTGCTTTaGCCTTCACCAAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: STLLLPRAPYWDPGAPLPLSQLL*PSPKAF
Trigger: AAAAGCTTTTGGTGAAGGCCAAAGCAGCTGAGAAAG...AGGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGATGCCTTTGCAACTTaGTCTGCAGCAGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGDAFAT*SAAGKV
Trigger: GACTTTCCCTGCTGCAGACCAAGTTGCAAAGGCATC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGTAGTCATGTCAAAGTaGCAGCGGCTGGAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSVVMSK*QRLEWL
Trigger: TAGCCACTCCAGCCGCTGTCACTTTGACATGACTAC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCACATACAGTGTCCTTTaGTCCTTGAGGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGTYSVL*SLRMAV
Trigger: CACTGCCATCCTCAAGGATCAAAGGACACTGTATGT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATGGCAGTTTGCGCCCTaGGTGTTGTGCAAACATCGA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSWQFAP*VLCKHR
Trigger: TCGATGTTTGCACAACACTCAGGGCGCAAACTGCCA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGGTCTGATTGAGGGCTaGTCCATAGTGACCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQGLIEG*SIVTWF
Trigger: AAACCAGGTCACTATGGATCAGCCCTCAATCAGACC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGGTCTGATTGAGGGCTaGTCCATAGTGACCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGGLIEG*SIVTWF
Trigger: AAACCAGGTCACTATGGATCAGCCCTCAATCAGACC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTTCTGCAGGTCTGATTaGGGGCTGATCCATAGTGAC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLFCRSD*GLIHSD
Trigger: GTCACTATGGATCAGCCCTCAATCAGACCTGCAGAA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTTGACAGCGTGGTCTTaGTGCCTTTGCAACTTGGTC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLLTAWS*CLCNLV
Trigger: GACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATCTCCCCGCATCTTCTaGATAGGGCGACATTCGCTA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSPRIF*IGRHSL
Trigger: TAGCGAATGTCGCCCTATGCAGAAGATGCGGGGAGA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCCTGGAAGAAGTCCTTaGATCTCTCACAGTTCGGAC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLPGRSP*ISHSSD
Trigger: GTCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACTGCAGCGGTCGCAGTaGTGCCCCTCAGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSLQRSQ*CPSVLC
Trigger: GCACAACACTGAGGGGCAGCACTGCGACCGCTGCAG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCACATTCACAAGGAATaGACGCGTAGGGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGHIHKE*TRRDLR
Trigger: TCTCAGATCCCTACGCGTGCATTCCTTGTGAATGTG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCCCAGTATCCAACAGTaGATTCTTCGCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLPSIQQ*ILRSVL
Trigger: GAGCACACTGCGAAGAATGCACTGTTGGATACTGGG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACCCAGTATCCAACAGTaGATTCTTCGCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRPSIQQ*ILRSVL
Trigger: GAGCACACTGCGAAGAATGCACTGTTGGATACTGGG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGACAGTCCAGTCAGCTaGAGACTGGGTTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLDSPVS*RLGFIV
Trigger: CACTATGAAACCCAGTCTGCAGCTGACTGGACTGTC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGACAGTCCAGTCAGCTaGAGACTGGGTTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQDSPVS*RLGFIV
Trigger: CACTATGAAACCCAGTCTGCAGCTGACTGGACTGTC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAATGACTGACATCCTCTaGCAGGGACCAGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRMTDIL*QGPDSS
Trigger: ACTGGAATCTGGTCCCTGGCAGAGGATGTCAGTCAT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGATGACTGACATCCTCTaGCAGGGACCAGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGMTDIL*QGPDSS
Trigger: ACTGGAATCTGGTCCCTGGCAGAGGATGTCAGTCAT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATTTCCTGGCACTCACTaGAACGTTTCCCGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSFPGTH*NVSRRN
Trigger: GTTACGGCGGGAAACGTTGCAGTGAGTGCCAGGAAA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGGGCTTCTGGGTACCTaGCCTGTTACAATCACATGG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSGLLGT*PVTITW
Trigger: CCATGTGATTGTAACAGGGCAGGTACCCAGAAGCCC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAGGTCTTTGAAGTCTaGCTCACAGACAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSEVFEV*LTDRQG
Trigger: ACCCTGCCTGTCTGTGAGGCAGACTTCAAAGACCTC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGGAGTCCGCAATGCTTaGATTAAGGACACTGGATTG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGGVRNA*IKDTGL
Trigger: CAATCCAGTGTCCTTAATGCAAGCATTGCGGACTCC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTTGCAACTTGGTCTaGAGCAGGGAAAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGLCNLV*SRESPS
Trigger: GGATGGACTTTCCCTGCTGCAGACCAAGTTGCAAAG...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACTCCAAGGAGCATCCTaGAAGAAGTCCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVLQGAS*KKSLHL
Trigger: GAGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAAGGCAGGATCAGAGTaGCTCACACAAATGCCACCA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLKAGSE*LTQMPP
Trigger: TGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATCTTTACAAAGGCACTaGCCGGCCACAGACCCTAAG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSLQRH*PATDPK
Trigger: CTTAGGGTCTGTGGCCGGCCAGTGCCTTTGTAAAGA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATGCACTGGTCGCATTTaGCTCCTTCCACGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVCTGRI*LLPRSL
Trigger: AAGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAATCACAGGTCAAGAATaGCAGACTCCCAAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVITGQE*QTPKGV
Trigger: AACCCCCTTGGGAGTCTGCCATTCTTGACCTGTGAT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGACAGGCACAAGCATTaGCCTGTATCCACATCACAG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLDRHKH*PVSTSQ
Trigger: CTGTGATGTGGATACAGGCCAATGCTTGTGCCTGTC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGGATGGCAGTGACATaGGTGACAGCCGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSRMAVT*VTAVMP
Trigger: GGGCATCACGGCTGTCACCCATGTCACTGCCATCCT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCCGGCTGCAGGACTCTaGATCGGTTACATCTATGTT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQPAAGL*IGYIYV
Trigger: AACATAGATGTAACCGATCCAGAGTCCTGCAGCCGG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCTCACGCCGGAAGCATaGCAGGAGCATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLTPEA*QEHLLQ
Trigger: CTGCAGAAGATGCTCCTGCCATGCTTCCGGCGTGAG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCAATTTACACGGACACTaGCCTGTAAGCTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGNLHGH*PVSWSQ
Trigger: CTGTGACCAGCTTACAGGCCAGTGTCCGTGTAAATT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTCACAGATGGGCTTCTaGGTACCTGCCCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLSQMGF*VPALLQ
Trigger: TTGTAACAGGGCAGGTACCCAGAAGCCCATCTGTGA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTCACAGATGGGCTTCTaGGTACCTGCCCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGSQMGF*VPALLQ
Trigger: TTGTAACAGGGCAGGTACCCAGAAGCCCATCTGTGA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGACCCTTGCACCGCTTTaGAGAGGGAAGAAATGGTGT +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGTLAPL*RGKKWC
Trigger: ACACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGCTTCCTGGGCTTTTTaGAGGGCATTCGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSASWAF*RAFVER
Trigger: CCTCTCAACGAATGCCCTCCAAAAAGCCCAGGAAGC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGACACTCTTCATTTCCCTaGTTTGATTTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGHSSFP*FDFQPA
Trigger: TGCAGGCTGAAAATCAAACCAGGGAAATGAAGAGTG...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGATGCCTTTGCAACTTaGTCTGCAGCAGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGDAFAT*SAAGKV
Trigger: GACTTTCCCTGCTGCAGACCAAGTTGCAAAGGCATC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGTGGCATTTTCCTGGTaGCATTTCAACCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQVAFSW*HFNLQP
Trigger: TGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCAC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGTGGCATTTTCCTGGTaGCATTTCAACCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRVAFSW*HFNLQP
Trigger: TGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCAC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGAGCTTTTGAGTAACTaGGCCACCCAAGGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVELLSN*ATQGAK
Trigger: TTTTGCACCTTGGGTGGCTCAGTTACTCAAAAGCTC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGTCATCTTGAGCTTTTaGGTAACTGAGCCACCCAAG +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGVILSF*VTEPPK
Trigger: CTTGGGTGGCTCAGTTACTCAAAAGCTCAAGATGAC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGTCATCTTGAGCTTTTaGGTAACTGAGCCACCCAAG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVVILSF*VTEPPK
Trigger: CTTGGGTGGCTCAGTTACTCAAAAGCTCAAGATGAC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGAACCTCTCCACCTGTTaGGGGTTCAATATCCGAGTA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQNLSTC*GFNIRV
Trigger: TACTCGGATATTGAACCCTCAACAGGTGGAGAGGTT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTGCTCCGGTGACATATaGCAGGCACAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSCSGDI*QAQALA
Trigger: GGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATCTCCTAAAACAACGTaGACAGCAGGACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSPKTT*TAGLWP
Trigger: TGGCCAGAGTCCTGCTGTTCACGTTGTTTTAGGAGA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCACCAGGACATGTGAATaGGCGTGGGACTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSTRTCE*AWDSPC
Trigger: GCAAGGAGAGTCCCACGCTCATTCACATGTCCTGGT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAACATACAGTGTCCTTTaGTCCTTGAGGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVTYSVL*SLRMAV
Trigger: CACTGCCATCCTCAAGGATCAAAGGACACTGTATGT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTCCACAATTGAAGCATaGCCCTGTCTCAGGATCACA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQSTIEA*PCLRIT
Trigger: TGTGATCCTGAGACAGGGTCATGCTTCAATTGTGGA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATCCACAATTGAAGCATaGCCCTGTCTCAGGATCACA +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRSTIEA*PCLRIT
Trigger: TGTGATCCTGAGACAGGGTCATGCTTCAATTGTGGA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGACGACAGGGCTGTCCTaGAGAAGGATTTCCATAGTA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQTTGLS*RRISIV
Trigger: TACTATGGAAATCCTTCTTCAGGACAGCCCTGTCGT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGGGTCACAGTCACATaGCTGACATCCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSRVTVT*LTSSAR
Trigger: CCTGGCAGAGGATGTCAGTCATGTGACTGTGACCCT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTTCTTGATGTTTTCTaGGGAGTCCGCAATGCTTGC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGFLDVF*GVRNAC
Trigger: GCAAGCATTGCGGACTCCTCAGAAAACATCAAGAAA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp CGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTCATTTTGATGGAATTGGTAGGTaGATGTCAAGCACACCATTC +
Preference number: 4 (lower is better)
Translates to: RPFSSGSMGKTAKSMSHFDGIGR*MSSTPF
Trigger: GAATGGTGTGCTTGACATTCACCTACCAATTCCATC...AAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTCATTTCCCTGGTTTaGTTTTCAGCCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGFISLV*FSACST
Trigger: TGTGCTGCAGGCTGAAAATCAAACCAGGGAAATGAA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATATGCAGTGAATAAATaGCTGAGACAACTCCACTTC +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGYAVNK*LRQLHF
Trigger: GAAGTGGAGTTGTCTCAGTCATTTATTCACTGCATA...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACCTGGAAGAAGTCCTTaGATCTCTCACAGTTCGGAC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSPGRSP*ISHSSD
Trigger: GTCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAGTTGTCCTGGAGGTCTaGAGCTGGCCTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSVVLEV*SWPPRS
Trigger: GCTCCTTGGAGGCCAGCTGCAGACCTCCAGGACAAC...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTGCCCCTCAGTGTTGTaGTGGCAGTCTTCACACACG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSCPSVL*WQSSHT
Trigger: CGTGTGTGAAGACTGCCAGCACAACACTGAGGGGCA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAGTGGCTCACACAAATaGCACCAGATATGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRSGSHK*HQIWSH
Trigger: ATGGGACCATATCTGGTGGCATTTGTGTGAGCCACT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCATCTATGTTGTTGTTaGAGGCACATGGTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGHLCCC*RHMVGK
Trigger: CTTGCCAACCATGTGCCTGCAACAACAACATAGATG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTACAATCACATGGAATaGATCGCCCAGGTGGATCAC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGYNHME*IAQVDH
Trigger: GTGATCCACCTGGGCGATGCATTCCATGTGATTGTA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAGTCTCATTAACCCTTaGACCGCTTTGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLSLINP*TALERE
Trigger: TTCCCTCTCCAAAGCGGTGCAAGGGTTAATGAGACT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGGAGTCCGCAATGCTTaGATTAAGGACACTGGATTG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLGVRNA*IKDTGL
Trigger: CAATCCAGTGTCCTTAATGCAAGCATTGCGGACTCC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGTTTTTGGAGACTTCTaGCTGTTCACTTATACTTTC +
Preference number: 4 (lower is better)
Translates to: FPTLSTLLLPRAPYWDPGVFGDF*LFTYTF
Trigger: GAAAGTATAAGTGAACAGGCAGAAGTCTCCAAAAAC...CCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTGCTGCTTTCTCAGCTaGTTTGGCCTTCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGCCFLS*FGLHQK
Trigger: CTTTTGGTGAAGGCCAAAGCAGCTGAGAAAGCAGCA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTGCTGCTTTCTCAGCTaGTTTGGCCTTCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQCCFLS*FGLHQK
Trigger: CTTTTGGTGAAGGCCAAAGCAGCTGAGAAAGCAGCA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACTTTGCAACTTGGTCTaGAGCAGGGAAAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSLCNLV*SRESPS
Trigger: GGATGGACTTTCCCTGCTGCAGACCAAGTTGCAAAG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGGCTCCTCTTCCTCTTTATCCAAAATTATaGCCACGCATGCTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: STLLLPRAPYWDPGAPLPLYPKL*PRMLSV
Trigger: AACAGAAAGCATGCGTGGGCATAATTTTGGATAAAG...AGGAAGAGGAGCCCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGTGTGGCTGTTGGGTTaGTCATACGGATCATATGGA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQVWLLG*SYGSYG
Trigger: TCCATATGATCCGTATGACCAACCCAACAGCCACAC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGTGTGGCTGTTGGGTTaGTCATACGGATCATATGGA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLVWLLG*SYGSYG
Trigger: TCCATATGATCCGTATGACCAACCCAACAGCCACAC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACAATGGTGTGGCTGTTaGGTTGGTCATACGGATCAT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVQWCGC*VGHTDH
Trigger: ATGATCCGTATGACCAACCCAACAGCCACACCATTG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCAATGGTGTGGCTGTTaGGTTGGTCATACGGATCAT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQQWCGC*VGHTDH
Trigger: ATGATCCGTATGACCAACCCAACAGCCACACCATTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACGACATTCGCTAGCATaGCCATTGCAAAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVRHSLA*PLQKQL
Trigger: AAGCTGCTTTTGCAATGGCCATGCTAGCGAATGTCG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACTCCAAGGAGCATCCTaGAAGAAGTCCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSLQGAS*KKSLHL
Trigger: GAGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACTGCAAGCGTTGTCCTaGAGGTCTGCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSLQALS*RSAAGL
Trigger: GAGGCCAGCTGCAGACCTCCAGGACAACGCTTGCAG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGAAATGCCACCAGATATaGTCCCATCGGGGTCACATT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQKCHQI*SHRGHI
Trigger: AATGTGACCCCGATGGGACCATATCTGGTGGCATTT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAAATGCCACCAGATATaGTCCCATCGGGGTCACATT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRKCHQI*SHRGHI
Trigger: AATGTGACCCCGATGGGACCATATCTGGTGGCATTT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAAGGCAGGATCAGAGTaGCTCACACAAATGCCACCA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSKAGSE*LTQMPP
Trigger: TGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATTAGTCCGTAGTGGTTaGGTTTGCACTGGTCGCATT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVLVRSG*VCTGRI
Trigger: AATGCGACCAGTGCAAACCCAACCACTACGGACTAA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTTAGTCCGTAGTGGTTaGGTTTGCACTGGTCGCATT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQLVRSG*VCTGRI
Trigger: AATGCGACCAGTGCAAACCCAACCACTACGGACTAA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACAGCCCAGGGGGTCGGTaGCGCTTAGTCCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYSPGGR*RLVRSG
Trigger: ACCACTACGGACTAAGCGCCACCGACCCCCTGGGCT...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGACAGGCACAAGCATTaGCCTGTATCCACATCACAG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSDRHKH*PVSTSQ
Trigger: CTGTGATGTGGATACAGGCCAATGCTTGTGCCTGTC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACCCCAGGGAGAACCCTaGCAAATCCAGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSPQGEP*QIQVQS
Trigger: GGACTGGACCTGGATTTGCCAGGGTTCTCCCTGGGG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTTGACTGTAGAGTCTTaGGTATGCAGTGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGLTVES*VCSAHS
Trigger: GGAGTGAGCACTGCATACCCAAGACTCTACAGTCAA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATTGCAGGCACATGGTTaGCAAGGTGCTCCTGAAATT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRLQAHG*QGAPEI
Trigger: AATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAAATGCATCGCCCAGGTaGATCACCATAATAATTTTC +
Preference number: 4 (lower is better)
Translates to: PFPTLSTLLLPRAPYWDPNASPR*ITIIIF
Trigger: GAAAATTATTATGGTGATCCACCTGGGCGATGCATT...TGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTGGAGAGGGAAGAAATaGTGTGGTCCCACTGATCAA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLWRGKK*CGPTDQ
Trigger: TTGATCAGTGGGACCACACCATTTCTTCCCTCTCCA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGACATGGCACATTTCCTaGATCTCCGCACACCTTTTC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQTWHIS*ISAHLF
Trigger: GAAAAGGTGTGCGGAGATCCAGGAAATGTGCCATGT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGACATGGCACATTTCCTaGATCTCCGCACACCTTTTC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLTWHIS*ISAHLF
Trigger: GAAAAGGTGTGCGGAGATCCAGGAAATGTGCCATGT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATTATTCTTCTTATCTTaGCCTCTGTATCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGLFFLS*PLYLQP
Trigger: TGGCTGGAGATACAGAGGCCAAGATAAGAAGAATAA...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGAAGTGGCATTTTCCTaGTGGCATTTCAACCTCCAG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQEVAFS*WHFNLQ
Trigger: CTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAGCTTTTGAGTAACTaGGCCACCCAAGGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSELLSN*ATQGAK
Trigger: TTTTGCACCTTGGGTGGCTCAGTTACTCAAAAGCTC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCACGCGTAGGGATCTaGGATGGTCTTGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWARVGI*DGLERV
Trigger: GACCCGCTCAAGACCATCTCAGATCCCTACGCGTGC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGAACACCCATGGAGATaGTTTCCCAGGCCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSEHPWR*FPRPQY
Trigger: ATACTGGGGCCTGGGAAATCATCTCCATGGGTGTTC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGAGCAGCTACGGCCAGTaGCATGTGGGCGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALSSYGQ*HVGGIH
Trigger: GTGAATGCCGCCCACATGTCACTGGCCGTAGCTGCT...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGAAAGGGAATGTTGTTaGCAGCAAATCTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVERECC*QQISSQ
Trigger: CTGGCTTGAGATTTGCTGTCAACAACATTCCCTTTC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGAAAGGGAATGTTGTTaGCAGCAAATCTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRERECC*QQISSQ
Trigger: CTGGCTTGAGATTTGCTGTCAACAACATTCCCTTTC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAGTCCACCAGGACATGTaGATGAGCGTGGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSVHQDM*MSVGLS
Trigger: GGAGAGTCCCACGCTCATTCACATGTCCTGGTGGAC...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATTGAGGTCCCATTGCTaGGGCAATTTCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRLRSHC*GNFNTV
Trigger: AACTGTGTTGAAATTGCCTCAGCAATGGGACCTCAA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCATCATAGCTTCCAGTTaGGCACCTGTCACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSIIASS*APVTAA
Trigger: CGCTGCTGTGACAGGTGCTCAACTGGAAGCTATGAT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGCAAGGTGCTCCTaGAATTCTTGGATTTCCATA +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGLARCS*NSWISI
Trigger: TATGGAAATCCAAGAATTTCAGGAGCACCTTGCCAA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATTTCTTGATGTTTTCTaGGGAGTCCGCAATGCTTGC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVFLDVF*GVRNAC
Trigger: GCAAGCATTGCGGACTCCTCAGAAAACATCAAGAAA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGATGGAATTGGTAGGTaGATGTCAAGCACACCATTC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQDGIGR*MSSTPF
Trigger: GAATGGTGTGCTTGACATTCACCTACCAATTCCATC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTTGCCCGTCCTTGAGTaGTTTGAGCTTGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLLPVLE*FELVVT
Trigger: AGTTACAACAAGCTCAAATCACTCAAGGACGGGCAA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTTGCCCGTCCTTGAGTaGTTTGAGCTTGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQLPVLE*FELVVT
Trigger: AGTTACAACAAGCTCAAATCACTCAAGGACGGGCAA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTTCATTTCCCTGGTTTaGTTTTCAGCCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQFISLV*FSACST
Trigger: TGTGCTGCAGGCTGAAAATCAAACCAGGGAAATGAA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp CGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTAGAGTCCATTCCTATCTTGCTGAGTTCTaGAAACAGCCTGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: RLTPSSVEGPWLKTRVHSYLAEF*KQPVIL
Trigger: AAGAATAACAGGCTGTTTTCAGAACTCAGCAAGATA...GGAATGGACTCTAGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGTGTAGAAGAGGGGTCTaGAGCGGTCGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWCRRGV*SGRSAA
Trigger: GGCAGCACTGCGACCGCTGCAGACCCCTCTTCTACA...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAGTGGCTCACACAAATaGCACCAGATATGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSGSHK*HQIWSH
Trigger: ATGGGACCATATCTGGTGGCATTTGTGTGAGCCACT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTACTCATCTAAGTCCTaGTTGCTGCAGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGYSSKS*LLQKFS
Trigger: GGAGAATTTCTGCAGCAAGCAGGACTTAGATGAGTA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGGGCAAAATACTGATTaGTTGAGGGATCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLGQNTD*LRDHLD
Trigger: GTCCAGATGATCCCTCAAGCAATCAGTATTTTGCCC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGGGCAAAATACTGATTaGTTGAGGGATCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRGQNTD*LRDHLD
Trigger: GTCCAGATGATCCCTCAAGCAATCAGTATTTTGCCC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCTATGTTGTTGTTaGAGGCACATGGTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVHLCCC*RHMVGK
Trigger: CTTGCCAACCATGTGCCTGCAACAACAACATAGATG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCATAGTGACCTGGTTTaGAGAGCTGGCAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSHSDLV*RAGSLR
Trigger: GCGCAAACTGCCAGCTCTGCAAACCAGGTCACTATG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCAAAGGCACAAGCTTTTaGTCTTTAACTCTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGKGTSF*SLTLPS
Trigger: GCTAGGCAGAGTTAAAGAGCAAAAGCTTGTGCCTTT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGCCAGGAGATCACCAGTaGTGGGATGACAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALPGDHQ*WDDRHP
Trigger: GGGGTGCCTGTCATCCCACCACTGGTGATCTCCTGG...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAACATTCTCAATGGTGTaGCTGTTGGGTTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVTFSMV*LLGWSY
Trigger: GTATGACCAACCCAACAGCCACACCATTGAGAATGT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGAAGGTCAGGATAAGGTaGCTGAACCGAAATAATGCC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGKVRIR*LNRNNA
Trigger: GGCATTATTTCGGTTCAGCCACCTTATCCTGACCTT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACGACATTCGCTAGCATaGCCATTGCAAAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSRHSLA*PLQKQL
Trigger: AAGCTGCTTTTGCAATGGCCATGCTAGCGAATGTCG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCAAAGTGACAGCGGCTaGAGTGGCTATTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSQSDSG*SGYYSC
Trigger: GCAGCTGTAATAGCCACTCCAGCCGCTGTCACTTTG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTCTTTACAAAGGCACTaGCCGGCCACAGACCCTAAG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSSLQRH*PATDPK
Trigger: CTTAGGGTCTGTGGCCGGCCAGTGCCTTTGTAAAGA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTGGTTGGGTTTGCACTaGTCGCATTTGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSWLGLH*SHLAPS
Trigger: GGAAGGAGCCAAATGCGACCAGTGCAAACCCAACCA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATGGAGAGGGAAGAAATaGTGTGGTCCCACTGATCAA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSWRGKK*CGPTDQ
Trigger: TTGATCAGTGGGACCACACCATTTCTTCCCTCTCCA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGCTTCCTGGGCTTTTTaGAGGGCATTCGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSASWAF*RAFVER
Trigger: CCTCTCAACGAATGCCCTCCAAAAAGCCCAGGAAGC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAATGGATTTTGCTTCCTaGGCTTTTTGGAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVMDFAS*AFWRAF
Trigger: GAATGCCCTCCAAAAAGCCCAGGAAGCAAAATCCAT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAGTGGCATTTTCCTaGTGGCATTTCAACCTCCAG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSEVAFS*WHFNLQ
Trigger: CTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCAATTCTACAGGATCTaGGAGTCTTTGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQQFYRI*ESLWRG
Trigger: ACCTCTCCACAAAGACTCCCAGATCCTGTAGAATTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388781.8
CDS-3UTR TCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTTCACCAGTGGTGGGATaGCAGGCACCCCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCSPVVG*QAPLLQ
Trigger: CTGCAACAGGGGTGCCTGTCATCCCACCACTGGTGA...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATGCTCCGGTGACATATaGCAGGCACAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSCSGDI*QAQALA
Trigger: GGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCA...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTCTCCTAAAACAACGTaGACAGCAGGACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSSPKTT*TAGLWP
Trigger: TGGCCAGAGTCCTGCTGTTCACGTTGTTTTAGGAGA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAAAATACTGATTGCTTaGGGGATCATCTGGACACAG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRKILIA*GIIWTQ
Trigger: CTGTGTCCAGATGATCCCTCAAGCAATCAGTATTTT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAAAATACTGATTGCTTaGGGGATCATCTGGACACAG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLKILIA*GIIWTQ
Trigger: CTGTGTCCAGATGATCCCTCAAGCAATCAGTATTTT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATTGGCAAGGTGCTCCTaGAATTCTTGGATTTCCATA +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRLARCS*NSWISI
Trigger: TATGGAAATCCAAGAATTTCAGGAGCACCTTGCCAA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTTCTGCAGGTCTGATTaGGGGCTGATCCATAGTGAC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSFCRSD*GLIHSD
Trigger: GTCACTATGGATCAGCCCTCAATCAGACCTGCAGAA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTTCCCCTTTCAATTATaGAGTGGCATTTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLFPFQL*SGIFLV
Trigger: CACCAGGAAAATGCCACTTCATAATTGAAAGGGGAA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACGCTGAGGCCACCGCTTaGCAGGTACGTAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYAEATA*QVRSHV
Trigger: GACATGACTACGTACCTGGCAAGCGGTGGCCTCAGC...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGGGCGGCATTCACACTaGCCATTCTTGGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWGRHSH*PFLGEH
Trigger: GTGCTCACCCAAGAATGGGCAGTGTGAATGCCGCCC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTGTTGTGGCTTCCTCTaGCTCGTAGAGATAGAAATT +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLCCGFL*LVEIEI
Trigger: AATTTCTATCTCTACGAGGCAGAGGAAGCCACAACA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATGTTGTGGCTTCCTCTaGCTCGTAGAGATAGAAATT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRCCGFL*LVEIEI
Trigger: AATTTCTATCTCTACGAGGCAGAGGAAGCCACAACA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCATCTAAGTCCTGCTTaGTGCAGAAATTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLHLSPA*CRNSPM
Trigger: CATTGGAGAATTTCTGCAGCAAGCAGGACTTAGATG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCTAAGTCCTGCTTaGTGCAGAAATTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVHLSPA*CRNSPM
Trigger: CATTGGAGAATTTCTGCAGCAAGCAGGACTTAGATG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTACTCATCTAAGTCCTaGTTGCTGCAGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQYSSKS*LLQKFS
Trigger: GGAGAATTTCTGCAGCAAGCAGGACTTAGATGAGTA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCACGAATAATGGATTTTaGTTCCTGGGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGTNNGF*FLGFLE
Trigger: CTCCAAAAAGCCCAGGAAGCAAAATCCATTATTCGT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATGTAATGGTAGAGTTTaGCCGTCCTTGAGTGATTTG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRCNGRV*PSLSDL
Trigger: CAAATCACTCAAGGACGGGCAAACTCTACCATTACA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTGTAATGGTAGAGTTTaGCCGTCCTTGAGTGATTTG +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQCNGRV*PSLSDL
Trigger: CAAATCACTCAAGGACGGGCAAACTCTACCATTACA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAAAGGCACAAGCTTTTaGTCTTTAACTCTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRKGTSF*SLTLPS
Trigger: GCTAGGCAGAGTTAAAGAGCAAAAGCTTGTGCCTTT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGGAGATCACCAGTGGTaGGATGACAGGCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWGDHQW*DDRHPC
Trigger: ACAGGGGTGCCTGTCATCCCACCACTGGTGATCTCC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAACATTCTCAATGGTGTaGCTGTTGGGTTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSTFSMV*LLGWSY
Trigger: GTATGACCAACCCAACAGCCACACCATTGAGAATGT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAAGGTCAGGATAAGGTaGCTGAACCGAAATAATGCC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSKVRIR*LNRNNA
Trigger: GGCATTATTTCGGTTCAGCCACCTTATCCTGACCTT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTGTGTCCATAGTCTGTaGAACGTTCAACTAACATTG +
Preference number: 4 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGCVHSL*NVQLTL
Trigger: CAATGTTAGTTGAACGTTCCACAGACTATGGACACA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCATCACAGGTCAAGAATaGCAGACTCCCAAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSITGQE*QTPKGV
Trigger: AACCCCCTTGGGAGTCTGCCATTCTTGACCTGTGAT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTACGGCCAGTGACATGTaGGCGGCATTCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCTASDM*AAFTLP
Trigger: GGGCAGTGTGAATGCCGCCCACATGTCACTGGCCGT...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACACTGTCCTGTTACTTaGTCACATACAGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRHCPVT*SHTVSF
Trigger: AAAGGACACTGTATGTGACCAAGTAACAGGACAGTG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCCGGCTGCAGGACTCTaGATCGGTTACATCTATGTT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSPAAGL*IGYIYV
Trigger: AACATAGATGTAACCGATCCAGAGTCCTGCAGCCGG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCCTGTTACAATCACATaGAATGCATCGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSPVTIT*NASPRW
Trigger: CCACCTGGGCGATGCATTCCATGTGATTGTAACAGG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCTTTCTCAGCTGCTTTaGCCTTCACCAAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQLSQLL*PSPKAF
Trigger: AAAAGCTTTTGGTGAAGGCCAAAGCAGCTGAGAAAG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCACTCTTCATTTCCCTaGTTTGATTTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQHSSFP*FDFQPA
Trigger: TGCAGGCTGAAAATCAAACCAGGGAAATGAAGAGTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGCCCCCTCCAGGTAACTaGGGATGCAGTATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALPPPGN*GCSISG
Trigger: CCCAGAAATACTGCATCCTCAGTTACCTGGAGGGGG...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGTTCAAAACTTACAATaGCATTCTCAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGVQNLQ*HSQWCG
Trigger: GCCACACCATTGAGAATGTCATTGTAAGTTTTGAAC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGTTCAAAACTTACAATaGCATTCTCAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVVQNLQ*HSQWCG
Trigger: GCCACACCATTGAGAATGTCATTGTAAGTTTTGAAC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGAGTCTGATGCTGACATaGTCAAGACCATTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGSLMLT*SRPFSD
Trigger: ATCTGAAAATGGTCTTGATCATGTCAGCATCAGACT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAGTCTGATGCTGACATaGTCAAGACCATTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRSLMLT*SRPFSD
Trigger: ATCTGAAAATGGTCTTGATCATGTCAGCATCAGACT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAACCTCTCCACCTGTTaGGGGTTCAATATCCGAGTA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSNLSTC*GFNIRV
Trigger: TACTCGGATATTGAACCCTCAACAGGTGGAGAGGTT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTCGCAGTGTGCTCCGGTaGCATATGACAGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCRSVLR*HMTGTS
Trigger: GCTTGTGCCTGTCATATGTCACCGGAGCACACTGCG...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGACCAGGACATGTGAATaGGCGTGGGACTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWTRTCE*AWDSPC
Trigger: GCAAGGAGAGTCCCACGCTCATTCACATGTCCTGGT...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCACGACAGGGCTGTCCTaGAGAAGGATTTCCATAGTA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSTTGLS*RRISIV
Trigger: TACTATGGAAATCCTTCTTCAGGACAGCCCTGTCGT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACAGCTGCACGATCTaGAAGCGTTGTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSYSCTI*KRCPGG
Trigger: ACCTCCAGGACAACGCTTGCAGATCGTGCAGCTGTA...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGTGCCCCTCAGTGTTGTaGTGGCAGTCTTCACACACG +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALCPSVL*WQSSHT
Trigger: CGTGTGTGAAGACTGCCAGCACAACACTGAGGGGCA...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCACATTCACAAGGAATaGACGCGTAGGGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSHIHKE*TRRDLR
Trigger: TCTCAGATCCCTACGCGTGCATTCCTTGTGAATGTG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACTAAGTCCTGCTTGCTaGAGAAATTCTCCAATGAAT +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRLSPAC*RNSPMN
Trigger: ATTCATTGGAGAATTTCTGCAGCAAGCAGGACTTAG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGTCTCATTAACCCTTaGACCGCTTTGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSSLINP*TALERE
Trigger: TTCCCTCTCCAAAGCGGTGCAAGGGTTAATGAGACT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp CGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTCATTTTGTCATTCCTTGTATTTaGAGAGGTATTAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: RPFSSGSMGKTAKSMSHFVIPCI*RGINGG
Trigger: TCCACCATTAATACCTCTGCAAATACAAGGAATGAC...AAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAACGAATAATGGATTTTaGTTCCTGGGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRTNNGF*FLGFLE
Trigger: CTCCAAAAAGCCCAGGAAGCAAAATCCATTATTCGT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTCCGAGATTGTGCCACTaGACTGCAGCAGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCPRLCH*TAAEST
Trigger: GGTGGACTCTGCTGCAGTGCAGTGGCACAATCTCGG...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGAGTGAGCCGAGATTGTaGCACTGCACTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALSEPRL*HCTAAE
Trigger: CTCTGCTGCAGTGCAGTGGCACAATCTCGGCTCACT...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAAGCAGGAGAATTGCTTaGACTCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSSRRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGAGTGCAAGCAATTCTCCTGCT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCATCTGGGAGTCTTTGTaGAGAGGTTCAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSIWESL*RGSGSK
Trigger: TTTGCTGCCTGAACCTCTCCACAAAGACTCCCAGAT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTCCCACTCCCTGGGCCTaGCCAGATGTGATGTTAGGA +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCPTPWA*PDVMLG
Trigger: TCCTAACATCACATCTGGCCAGGCCCAGGGAGTGGG...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACAAAGTGACAGCGGCTaGAGTGGCTATTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSQSDSG*SGYYSC
Trigger: GCAGCTGTAATAGCCACTCCAGCCGCTGTCACTTTG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAAAAGGCGCCAGTCCTTaGAGTGTTGTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSKGASP*SVVASS
Trigger: AGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATCCAATGAATTGATTTaGGGAATAAGGCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRSNELI*GIRPRE
Trigger: CTCTCTTGGCCTTATTCCCCAAATCAATTCATTGGA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTCCAATGAATTGATTTaGGGAATAAGGCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGSNELI*GIRPRE
Trigger: CTCTCTTGGCCTTATTCCCCAAATCAATTCATTGGA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTTGCAGGCACATGGTTaGCAAGGTGCTCCTGAAATT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLQAHG*QGAPEI
Trigger: AATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAATGCATCGCCCAGGTaGATCACCATAATAATTTTC +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRNASPR*ITIIIF
Trigger: GAAAATTATTATGGTGATCCACCTGGGCGATGCATT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGAATGCATCGCCCAGGTaGATCACCATAATAATTTTC +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGNASPR*ITIIIF
Trigger: GAAAATTATTATGGTGATCCACCTGGGCGATGCATT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATTCACCAAAAGCTTTTaGGCTCCATCTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSFTKSF*APSASS
Trigger: TGAAGAAGCAGATGGAGCCCAAAAGCTTTTGGTGAA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACTTTCTCAGCTGCTTTaGCCTTCACCAAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSLSQLL*PSPKAF
Trigger: AAAAGCTTTTGGTGAAGGCCAAAGCAGCTGAGAAAG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACACTCTTCATTTCCCTaGTTTGATTTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSHSSFP*FDFQPA
Trigger: TGCAGGCTGAAAATCAAACCAGGGAAATGAAGAGTG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTTATTCTTCTTATCTTaGCCTCTGTATCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGLFFLS*PLYLQP
Trigger: TGGCTGGAGATACAGAGGCCAAGATAAGAAGAATAA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGGTAGTCATGTCAAAGTaGCAGCGGCTGGAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALVVMSK*QRLEWL
Trigger: TAGCCACTCCAGCCGCTGTCACTTTGACATGACTAC...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGGATCTGAGATGGTCTTaGGCGGGTCCCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALDLRWS*AGPCRR
Trigger: TCTTCTACAGGGACCCGCTCAAGACCATCTCAGATC...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGAACACCCATGGAGATaGTTTCCCAGGCCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWEHPWR*FPRPQY
Trigger: ATACTGGGGCCTGGGAAATCATCTCCATGGGTGTTC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTTGAGGTCCCATTGCTaGGGCAATTTCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLRSHC*GNFNTV
Trigger: AACTGTGTTGAAATTGCCTCAGCAATGGGACCTCAA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATGTGATAATATTTCTTaGTGTTTTCTGAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: SVFHRFNRAPGACTSETRCDNIS*CFLRSP
Trigger: CGGACTCCTCAGAAAACATCAAGAAATATTATCACA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGATGGAATTGGTAGGTaGATGTCAAGCACACCATTC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSDGIGR*MSSTPF
Trigger: GAATGGTGTGCTTGACATTCACCTACCAATTCCATC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACGTAGAGTCTTGGGTATaGAGTGCTCACTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYVESWV*SAHSLQ
Trigger: CTGGAGGGAGTGAGCACTGCATACCCAAGACTCTAC...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAACCTTGAAGACAATTaGAGATTACATCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSNLEDN*RLHLSS
Trigger: GGAGCTCAGATGTAATCTGCAATTGTCTTCAAGGTT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGTCATTCCTTGTATTTaGAGAGGTATTAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLVIPCI*RGINGG
Trigger: TCCACCATTAATACCTCTGCAAATACAAGGAATGAC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGTTTTTGGAGACTTCTaGCTGTTCACTTATACTTTC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQVFGDF*LFTYTF
Trigger: GAAAGTATAAGTGAACAGGCAGAAGTCTCCAAAAAC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACAGGATGCAGTATTTCTaGGCTCTGCTCAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYRMQYF*ALLSPQ
Trigger: CTGTGGGCTGAGCAGAGCCCAGAAATACTGCATCCT...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGTCATACGGATCATATaGAAATCTAGAGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVVIRII*KSRVTD
Trigger: ATCTGTGACTCTAGATTTCCATATGATCCGTATGAC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATGTGTCCATAGTCTGTaGAACGTTCAACTAACATTG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSCVHSL*NVQLTL
Trigger: CAATGTTAGTTGAACGTTCCACAGACTATGGACACA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACAATATCCGAGTATTTaGAGTCACAAACAATGTCTC +
Preference number: 4 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVQYPSI*SHKQCL
Trigger: GAGACATTGTTTGTGACTCCAAATACTCGGATATTG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCAATATCCGAGTATTTaGAGTCACAAACAATGTCTC +
Preference number: 4 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQQYPSI*SHKQCL
Trigger: GAGACATTGTTTGTGACTCCAAATACTCGGATATTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAAAGGCAGGATCAGAGTaGCTCACACAAATGCCACCA +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSKAGSE*LTQMPP
Trigger: TGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGTCTTTACAAAGGCACTaGCCGGCCACAGACCCTAAG +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALSLQRH*PATDPK
Trigger: CTTAGGGTCTGTGGCCGGCCAGTGCCTTTGTAAAGA...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAATCACAGGTCAAGAATaGCAGACTCCCAAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSITGQE*QTPKGV
Trigger: AACCCCCTTGGGAGTCTGCCATTCTTGACCTGTGAT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACGTCCTTGGAGTGTTGTaGCTTCCTCTGCCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYVLGVL*LPLPRR
Trigger: TCTACGAGGCAGAGGAAGCCACAACACTCCAAGGAC...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp AACTCCACTTCTAAATACTTTATCCAAAATTATGCCCACGCATGCTTTCTGTTTTGTCTGGATCACAGATaGGCTTCTGGGTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSTSKYFIQNYAHACFLFCLDHR*ASGYLP
Trigger: GGGCAGGTACCCAGAAGCCCATCTGTGATCCAGACA...AAACAGAAAGCATGCGTGGGCATAATTTTGGATAAAGTATTTAGAAGTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCATGGATTTTGCTTCCTaGGCTTTTTGGAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSMDFAS*AFWRAF
Trigger: GAATGCCCTCCAAAAAGCCCAGGAAGCAAAATCCAT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCTTTCAATTATGAAGTaGCATTTTCCTGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLLSIMK*HFPGGI
Trigger: AATGCCACCAGGAAAATGCCACTTCATAATTGAAAG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp AACTCCACTTCTAAATACTTTATCCAAAATTATGCCCACGCATGCTTTCTGTTTACAGGCACAGCCTTGTaGTTCCGCCCCTTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: NSTSKYFIQNYAHACFLFTGTAL*FRPFSS
Trigger: ACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGT...AAACAGAAAGCATGCGTGGGCATAATTTTGGATAAAGTATTTAGAAGTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR TCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGTCTCCTAAAACAACGTaGACAGCAGGACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWSPKTT*TAGLWP
Trigger: TGGCCAGAGTCCTGCTGTTCACGTTGTTTTAGGAGA...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATGTGATAATATTTCTTaGTGTTTTCTGAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSCDNIS*CFLRSP
Trigger: CGGACTCCTCAGAAAACATCAAGAAATATTATCACA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTTCCCCTTTCAATTATaGAGTGGCATTTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSFPFQL*SGIFLV
Trigger: CACCAGGAAAATGCCACTTCATAATTGAAAGGGGAA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTTCTCCCCGCATCTTCTaGATAGGGCGACATTCGCTA +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCSPRIF*IGRHSL
Trigger: TAGCGAATGTCGCCCTATGCAGAAGATGCGGGGAGA...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAAGTGGCTCACACAAATaGCACCAGATATGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSSGSHK*HQIWSH
Trigger: ATGGGACCATATCTGGTGGCATTTGTGTGAGCCACT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTCGTAGTGGTTGGGTTTaGACTGGTCGCATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCRSGWV*TGRIWL
Trigger: GAGCCAAATGCGACCAGTGCAAACCCAACCACTACG...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGCCCAGTATCCAACAGTaGATTCTTCGCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALPSIQQ*ILRSVL
Trigger: GAGCACACTGCGAAGAATGCACTGTTGGATACTGGG...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGACAGTCCAGTCAGCTaGAGACTGGGTTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWDSPVS*RLGFIV
Trigger: CACTATGAAACCCAGTCTGCAGCTGACTGGACTGTC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AACTCCACTTCTAAATACTTTATCCAAAATTATGCCCACGCATGCTTTCTGTTTGGGCTTCTGGGTACCTaGCCTGTTACAATCACATGG +
Preference number: 4 (lower is better)
Translates to: NSTSKYFIQNYAHACFLFGLLGT*PVTITW
Trigger: CCATGTGATTGTAACAGGGCAGGTACCCAGAAGCCC...AAACAGAAAGCATGCGTGGGCATAATTTTGGATAAAGTATTTAGAAGTGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR GCA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGTTTTTGGAGACTTCTaGCTGTTCACTTATACTTTC +
Preference number: 4 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSVFGDF*LFTYTF
Trigger: GAAAGTATAAGTGAACAGGCAGAAGTCTCCAAAAAC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAATCTGGGAGTCTTTGTaGAGAGGTTCAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSIWESL*RGSGSK
Trigger: TTTGCTGCCTGAACCTCTCCACAAAGACTCCCAGAT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGCTCCAAGGAGCATCCTaGAAGAAGTCCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWLQGAS*KKSLHL
Trigger: GAGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAG...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGTGCACTGGTCGCATTTaGCTCCTTCCACGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALCTGRI*LLPRSL
Trigger: AAGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCA...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTTGGTTGGGTTTGCACTaGTCGCATTTGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCWLGLH*SHLAPS
Trigger: GGAAGGAGCCAAATGCGACCAGTGCAAACCCAACCA...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATTAGTCCGTAGTGGTTaGGTTTGCACTGGTCGCATT +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSLVRSG*VCTGRI
Trigger: AATGCGACCAGTGCAAACCCAACCACTACGGACTAA...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACGACAGGCACAAGCATTaGCCTGTATCCACATCACAG +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYDRHKH*PVSTSQ
Trigger: CTGTGATGTGGATACAGGCCAATGCTTGTGCCTGTC...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTGGGTTCACCACAATCTaGACAGTCCAGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCGFTTI*TVQSAA
Trigger: TGCAGCTGACTGGACTGTCCAGATTGTGGTGAACCC...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCACTGTCCTGTTACTTaGTCACATACAGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSHCPVT*SHTVSF
Trigger: AAAGGACACTGTATGTGACCAAGTAACAGGACAGTG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGAGCTTTTGAGTAACTaGGCCACCCAAGGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: NWYLHTVLMILKINWGGWELLSN*ATQGAK
Trigger: TTTTGCACCTTGGGTGGCTCAGTTACTCAAAAGCTC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAGAAAGGGAATGTTGTTaGCAGCAAATCTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSERECC*QQISSQ
Trigger: CTGGCTTGAGATTTGCTGTCAACAACATTCCCTTTC...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCTAAGTCCTGCTTGCTaGAGAAATTCTCCAATGAAT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLSPAC*RNSPMN
Trigger: ATTCATTGGAGAATTTCTGCAGCAAGCAGGACTTAG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGGTGTGGCTGTTGGGTTaGTCATACGGATCATATGGA +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALVWLLG*SYGSYG
Trigger: TCCATATGATCCGTATGACCAACCCAACAGCCACAC...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGCGACATTCGCTAGCATaGCCATTGCAAAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALRHSLA*PLQKQL
Trigger: AAGCTGCTTTTGCAATGGCCATGCTAGCGAATGTCG...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGAAATGCCACCAGATATaGTCCCATCGGGGTCACATT +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALKCHQI*SHRGHI
Trigger: AATGTGACCCCGATGGGACCATATCTGGTGGCATTT...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGTTGACTGTAGAGTCTTaGGTATGCAGTGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALLTVES*VCSAHS
Trigger: GGAGTGAGCACTGCATACCCAAGACTCTACAGTCAA...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCTTATTCTTCTTATCTTaGCCTCTGTATCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLFFLS*PLYLQP
Trigger: TGGCTGGAGATACAGAGGCCAAGATAAGAAGAATAA...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR TCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTAACCTCTCCACCTGTTaGGGGTTCAATATCCGAGTA +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCNLSTC*GFNIRV
Trigger: TACTCGGATATTGAACCCTCAACAGGTGGAGAGGTT...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTCACATTCACAAGGAATaGACGCGTAGGGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCHIHKE*TRRDLR
Trigger: TCTCAGATCCCTACGCGTGCATTCCTTGTGAATGTG...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGTCATTCCTTGTATTTaGAGAGGTATTAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSVIPCI*RGINGG
Trigger: TCCACCATTAATACCTCTGCAAATACAAGGAATGAC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp AACTCCACTTCTAAATACTTTATCCAAAATTATGCCCACGCATGCTTTCTGTTTTGCTGCTTTCTCAGCTaGTTTGGCCTTCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: NSTSKYFIQNYAHACFLFCCFLS*FGLHQK
Trigger: CTTTTGGTGAAGGCCAAAGCAGCTGAGAAAGCAGCA...AAACAGAAAGCATGCGTGGGCATAATTTTGGATAAAGTATTTAGAAGTGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTCAATGGTGTGGCTGTTaGGTTGGTCATACGGATCAT +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCQWCGC*VGHTDH
Trigger: ATGATCCGTATGACCAACCCAACAGCCACACCATTG...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGAAGGTCAGGATAAGGTaGCTGAACCGAAATAATGCC +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALKVRIR*LNRNNA
Trigger: GGCATTATTTCGGTTCAGCCACCTTATCCTGACCTT...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCTTTCAATTATGAAGTaGCATTTTCCTGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLSIMK*HFPGGI
Trigger: AATGCCACCAGGAAAATGCCACTTCATAATTGAAAG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR GCA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGTGTTGTGGCTTCCTCTaGCTCGTAGAGATAGAAATT +
Preference number: 4 (lower is better)
Translates to: YLHTVLMILKINWGGWALCCGFL*LVEIEI
Trigger: AATTTCTATCTCTACGAGGCAGAGGAAGCCACAACA...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR GCA 90 bp AACTCCACTTCTAAATACTTTATCCAAAATTATGCCCACGCATGCTTTCTGTTTAATTATGCCCACGCATaGTTTCTGTTTCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NSTSKYFIQNYAHACFLFNYAHA*FLFLAG
Trigger: CCCAGCAAGAAACAGAAAGCATGCGTGGGCATAATT...AAACAGAAAGCATGCGTGGGCATAATTTTGGATAAAGTATTTAGAAGTGGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTACATTCTCAATGGTGTaGCTGTTGGGTTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCTFSMV*LLGWSY
Trigger: GTATGACCAACCCAACAGCCACACCATTGAGAATGT...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATGTGTCCATAGTCTGTaGAACGTTCAACTAACATTG +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSCVHSL*NVQLTL
Trigger: CAATGTTAGTTGAACGTTCCACAGACTATGGACACA...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAATCTTAAAAATTAATTaGGGAGGCTGGGCATTGTGG +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSILKIN*GGWALW
Trigger: CCACAATGCCCAGCCTCCCCAATTAATTTTTAAGAT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACGTTCAAAACTTACAATaGCATTCTCAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYVQNLQ*HSQWCG
Trigger: GCCACACCATTGAGAATGTCATTGTAAGTTTTGAAC...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAGTCATACGGATCATATaGAAATCTAGAGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSVIRII*KSRVTD
Trigger: ATCTGTGACTCTAGATTTCCATATGATCCGTATGAC...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CCA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACAATATCCGAGTATTTaGAGTCACAAACAATGTCTC +
Preference number: 4 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSQYPSI*SHKQCL
Trigger: GAGACATTGTTTGTGACTCCAAATACTCGGATATTG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR TCA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTAGTCTGATGCTGACATaGTCAAGACCATTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCSLMLT*SRPFSD
Trigger: ATCTGAAAATGGTCTTGATCATGTCAGCATCAGACT...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS GCA 90 bp CGTGACAGCCGGGACCCCTACACTTCCTGTGCCCCTTCCGGCCCGTaGAGAGAGCACCGCCACAGGGCAAGGGCACACATGGCACATTTC +
Preference number: 5 (lower is better)
Translates to: RDSRDPYTSCAPSGP*REHRHRARAHMAHF
Trigger: GAAATGTGCCATGTGTGCCCTTGCCCTGTGGCGGTGCTCTCTGCACGGGCCGGAAGGGGCACAGGAAGTGTAGGGGTCCCGGCTGTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 90 bp CACCTGTCACAGCAGCGCCCGACCACAAGAGGTTTACACTGGCACTaGCCTCCAAGTCGGCTGCAGCTGGATCCGACTGAGCCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: HLSQQRPTTRGLHWH*PPSRLQLDPTEPWG
Trigger: CCCCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTGTGGTCGGGCGCTGCTGTGACAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 90 bp GCCCGACCACAAGAGGTTTACACTGGCACTGGCCTCCAAGTCGGCTaGAGCTGGATCCGACTGAGCCCTGGGGGTGACACTTGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: ARPQEVYTGTGLQVG*SWIRLSPGGDTCRP
Trigger: TGGCCTGCAAGTGTCACCCCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTGTGGTCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 90 bp TTTACACTGGCACTGGCCTCCAAGTCGGCTGCAGCTGGATCCGACTaGGCCCTGGGGGTGACACTTGCAGGCCACAGCCCCATCATGCAG +
Preference number: 5 (lower is better)
Translates to: FTLALASKSAAAGSD*ALGVTLAGHSPIMQ
Trigger: CTGCATGATGGGGCTGTGGCCTGCAAGTGTCACCCCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 90 bp ACAACGGTCACAGGCCAGGCCTGTGACATTCGGCAGACAAGGACATaGACCAGTGACAGGGTCACAGAGGCAAGCTCCCCCACCAGGGGG +
Preference number: 5 (lower is better)
Translates to: TTVTGQACDIRQTRT*TSDRVTEASSPTRG
Trigger: CCCCCTGGTGGGGGAGCTTGCCTCTGTGACCCTGTCACTGGTGCATGTCCTTGTCTGCCGAATGTCACAGGCCTGGCCTGTGACCGTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000471677.5
ENST00000475469.1
CDS CCA 90 bp GTTGAGCACCTGTCACAGCAGCGCCCGACCACAAGAGGTTTACACTaGCACTGGCCTCCAAGTCGGCTGCAGCTGGATCCGACTGAGCCC +
Preference number: 5 (lower is better)
Translates to: VEHLSQQRPTTRGLH*HWPPSRLQLDPTEP
Trigger: GGGCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTGTGGTCGGGCGCTGCTGTGACAGGTGCTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 90 bp CCCCCGCTGAGGCCACCGCTTGCCAGGTACGTAGTCATGTCAAAGTaGCAGCGGCTGGAGTGGCTATTACAGCTGCACGATCTGCAAGCG +
Preference number: 5 (lower is better)
Translates to: PPLRPPLARYVVMSK*QRLEWLLQLHDLQA
Trigger: CGCTTGCAGATCGTGCAGCTGTAATAGCCACTCCAGCCGCTGTCACTTTGACATGACTACGTACCTGGCAAGCGGTGGCCTCAGCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS GCA 90 bp CCTATTACAAGGGCAAGGGTGGCAGCTGGGAAATCCAAAGTAGCCTaGCAGGCAGCGATCACAGCGGCGGCCAGACACCTCTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: PITRARVAAGKSKVA*QAAITAAARHLSMA
Trigger: TGCCATGGAGAGGTGTCTGGCCGCCGCTGTGATCGCTGCCTGGCAGGCTACTTTGGATTTCCCAGCTGCCACCCTTGCCCTTGTAATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CCA 90 bp TCTCTGGCCGCTGACACCCTCCCGGCAGCGGCACATGCCTGTGTCTaGATCACAGATGGGCTTCTGGGTACCTGCCCTGTTACAATCACA +
Preference number: 5 (lower is better)
Translates to: SLAADTLPAAAHACV*ITDGLLGTCPVTIT
Trigger: TGTGATTGTAACAGGGCAGGTACCCAGAAGCCCATCTGTGATCCAGACACAGGCATGTGCCGCTGCCGGGAGGGTGTCAGCGGCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS-3UTR CAA 90 bp CTTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACGGAACAGGCACAGCCTaGTGGTTCCGCCCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LAGTPTDTKFCGRTLAEDGTGTA*WFRPFS
Trigger: TGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCC...GTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS GCA 90 bp GGCAGCCCAGGGGGTCGGTGGCGCTTAGTCCGTAGTGGTTGGGTTTaGACTGGTCGCATTTGGCTCCTTCCACGTTCTCTTTACAAAGGC +
Preference number: 5 (lower is better)
Translates to: GSPGGRWRLVRSGWV*TGRIWLLPRSLYKG
Trigger: GCCTTTGTAAAGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCAAACCCAACCACTACGGACTAAGCGCCACCGACCCCCTGGGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 90 bp GGTCACATTCACAAGGAATGCACGCGTAGGGATCTGAGATGGTCTTaGGCGGGTCCCTGTAGAAGAGGGGTCTGCAGCGGTCGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: GHIHKECTRRDLRWS*AGPCRRGVCSGRSA
Trigger: AGCACTGCGACCGCTGCAGACCCCTCTTCTACAGGGACCCGCTCAAGACCATCTCAGATCCCTACGCGTGCATTCCTTGTGAATGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 90 bp GCCGGAAGCATGGCAGGAGCATCTTCTGCAGGTCTGATTGAGGGCTaGTCCATAGTGACCTGGTTTGCAGAGCTGGCAGTTTGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: AGSMAGASSAGLIEG*SIVTWFAELAVCAL
Trigger: CAGGGCGCAAACTGCCAGCTCTGCAAACCAGGTCACTATGGATCAGCCCTCAATCAGACCTGCAGAAGATGCTCCTGCCATGCTTCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000471677.5
ENST00000475469.1
CDS CCA 90 bp CGGTGGCGCTTAGTCCGTAGTGGTTGGGTTTGCACTGGTCGCATTTaGCTCCTTCCACGTTCTCTTTACAAAGGCACTGGCCGGCCACAG +
Preference number: 5 (lower is better)
Translates to: RWRLVRSGWVCTGRI*LLPRSLYKGTGRPQ
Trigger: CTGTGGCCGGCCAGTGCCTTTGTAAAGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCAAACCCAACCACTACGGACTAAGCGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS-3UTR CAA 90 bp AGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCTGCAGAGCTGGCAGTTaGCGCCCTGAGTGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: SLVVPPLLKWQHGEDSQICRAGS*RPECCA
Trigger: TGCACAACACTCAGGGCGCAAACTGCCAGCTCTGCA...GATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS TCA 90 bp GTCCATGTAACAGGGTTCCCAGGAACTGGCTCTCCTAAAACAACGTaGACAGCAGGACTCTGGCCAAACGTCTCCGAGCCCAAAGGCGCC +
Preference number: 5 (lower is better)
Translates to: VHVTGFPGTGSPKTT*TAGLWPNVSEPKGA
Trigger: GGCGCCTTTGGGCTCGGAGACGTTTGGCCAGAGTCCTGCTGTTCACGTTGTTTTAGGAGAGCCAGTTCCTGGGAACCCTGTTACATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS GCA 90 bp GGCCGGCCACAGACCCTAAGGCAGGATCAGAGTGGCTCACACAAATaGCACCAGATATGGTCCCATCGGGGTCACATTCACAAGGAATGC +
Preference number: 5 (lower is better)
Translates to: GRPQTLRQDQSGSHK*HQIWSHRGHIHKEC
Trigger: GCATTCCTTGTGAATGTGACCCCGATGGGACCATATCTGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTTAGGGTCTGTGGCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS-3UTR CAA 90 bp GTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTTTGGAGGGCATTCGTaGAGAGGGTCAGGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: VVPPLLKWQHGEDSQINVFGGHS*RGSGSR
Trigger: ACGGCTCCCTGACCCTCTCAACGAATGCCCTCCAAA...GACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp TTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTCCCACTCTCTCAACATaGTTGCTGCCAAGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: LLGPRLTPSSVEGPWLKTPTLST*LLPRAP
Trigger: TGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGG...AGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS TCA 90 bp GACTCCCAGCCTGGTGTTGGGCAGATTCAGCCTGAACTTTCGCATTaGCAGCGTGGTCTTGATGCCTTTGCAACTTGGTCTGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: DSQPGVGQIQPELSH*QRGLDAFATWSAAG
Trigger: CCCTGCTGCAGACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAATGCGAAAGTTCAGGCTGAATCTGCCCAACACCAGGCTGGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS GCA 90 bp GTGGCTATTACAGCTGCACGATCTGCAAGCGTTGTCCTGGAGGTCTaGAGCTGGCCTCCAAGGAGCATCCTGGAAGAAGTCCTTGCATCT +
Preference number: 5 (lower is better)
Translates to: VAITAARSASVVLEV*SWPPRSILEEVLAS
Trigger: AGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAGGCCAGCTGCAGACCTCCAGGACAACGCTTGCAGATCGTGCAGCTGTAATAGCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp TTACAAAGGCACTGGCCGGCCACAGACCCTAAGGCAGGATCAGAGTaGCTCACACAAATGCCACCAGATATGGTCCCATCGGGGTCACAT +
Preference number: 5 (lower is better)
Translates to: LQRHWPATDPKAGSE*LTQMPPDMVPSGSH
Trigger: ATGTGACCCCGATGGGACCATATCTGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTTAGGGTCTGTGGCCGGCCAGTGCCTTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp CACTGGTCGCATTTGGCTCCTTCCACGTTCTCTTTACAAAGGCACTaGCCGGCCACAGACCCTAAGGCAGGATCAGAGTGGCTCACACAA +
Preference number: 5 (lower is better)
Translates to: HWSHLAPSTFSLQRH*PATDPKAGSEWLTQ
Trigger: TTGTGTGAGCCACTCTGATCCTGCCTTAGGGTCTGTGGCCGGCCAGTGCCTTTGTAAAGAGAACGTGGAAGGAGCCAAATGCGACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp GATCACAAAGTTCAGCAAACCTATTACAAGGGCAAGGGTGGCAGCTaGGAAATCCAAAGTAGCCTGCCAGGCAGCGATCACAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: DHKVQQTYYKGKGGS*EIQSSLPGSDHSGG
Trigger: GCCGCCGCTGTGATCGCTGCCTGGCAGGCTACTTTGGATTTCCCAGCTGCCACCCTTGCCCTTGTAATAGGTTTGCTGAACTTTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 90 bp CCAGGCCCCAGTATCCAACAGTGCATTCTTCGCAGTGTGCTCCGGTaGCATATGACAGGCACAAGCATTGGCCTGTATCCACATCACAGG +
Preference number: 5 (lower is better)
Translates to: PGPSIQQCILRSVLR*HMTGTSIGLYPHHR
Trigger: CCTGTGATGTGGATACAGGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCACACTGCGAAGAATGCACTGTTGGATACTGGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 90 bp ATGGCAGGGGCACTGTCCTGTTACTTGGTCACATACAGTGTCCTTTaGTCCTTGAGGATGGCAGTGACATGGGTGACAGCCGTGATGCCC +
Preference number: 5 (lower is better)
Translates to: MAGALSCYLVTYSVL*SLRMAVTWVTAVMP
Trigger: GGGCATCACGGCTGTCACCCATGTCACTGCCATCCTCAAGGATCAAAGGACACTGTATGTGACCAAGTAACAGGACAGTGCCCCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 90 bp GGAGGTCTGCAGCTGGCCTCCAAGGAGCATCCTGGAAGAAGTCCTTaGATCTCTCACAGTTCGGACCATCTGTATTGTGCTGACACACAC +
Preference number: 5 (lower is better)
Translates to: GGLQLASKEHPGRSP*ISHSSDHLYCADTH
Trigger: GTGTGTGTCAGCACAATACAGATGGTCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAGGCCAGCTGCAGACCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp CAAGCGTTGTCCTGGAGGTCTGCAGCTGGCCTCCAAGGAGCATCCTaGAAGAAGTCCTTGCATCTCTCACAGTTCGGACCATCTGTATTG +
Preference number: 5 (lower is better)
Translates to: QALSWRSAAGLQGAS*KKSLHLSQFGPSVL
Trigger: CAATACAGATGGTCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAGGCCAGCTGCAGACCTCCAGGACAACGCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS-3UTR CAA 90 bp AGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATACTCCCAGCCTGGTGTaGGGCAGATTCAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: SPFPTLSTLLLPRAPYWDTPSLV*GRFSLN
Trigger: GTTCAGGCTGAATCTGCCCAACACCAGGCTGGGAGT...ATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp GAGGAACAGGCACAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAGTTATTCTTCTTATCTaGGCCTCTGTATCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: EEQAQPCGSAPSQVAAWGVILLI*ASVSPA
Trigger: GGCTGGAGATACAGAGGCCAAGATAAGAAGAATAAC...TCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTGTGCCTGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS TCA 90 bp CTGGTCACAGTGGCTACTTTGAGAGGTCCTAGGGTCACAGTCACATaGCTGACATCCTCTGCCAGGGACCAGATTCCAGTATCCATCAGC +
Preference number: 5 (lower is better)
Translates to: LVTVATLRGPRVTVT*LTSSARDQIPVSIS
Trigger: GCTGATGGATACTGGAATCTGGTCCCTGGCAGAGGATGTCAGTCATGTGACTGTGACCCTAGGACCTCTCAAAGTAGCCACTGTGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000471677.5
ENST00000475469.1
CDS TCA 90 bp GCCGAGATTGTGCCACTGCACTGCAGCAGAGTCCACCAGGACATGTaGATGAGCGTGGGACTCTCCTTGCAAAGGCTGAGAAAAATAGAC +
Preference number: 5 (lower is better)
Translates to: AEIVPLHCSRVHQDM*MSVGLSLQRLRKID
Trigger: GTCTATTTTTCTCAGCCTTTGCAAGGAGAGTCCCACGCTCATTCACATGTCCTGGTGGACTCTGCTGCAGTGCAGTGGCACAATCTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS GCA 90 bp CTCCGAGCCCAAAGGCGCCAGTCCTTGGAGTGTTGTGGCTTCCTCTaGCTCGTAGAGATAGAAATTCAAAGGAGCAAAGAAGTAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRAQRRQSLECCGFL*LVEIEIQRSKEVAR
Trigger: CCTGGCTACTTCTTTGCTCCTTTGAATTTCTATCTCTACGAGGCAGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTTGGGCTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS GCA 90 bp CCTGAGTGTTGTGCAAACATCGAAGGCACTCCCCTGTTACCCGGCTaGAGGACTCTGGATCGGTTACATCTATGTTGTTGTTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PECCANIEGTPLLPG*RTLDRLHLCCCCRH
Trigger: GTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGGAGTGCCTTCGATGTTTGCACAACACTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CCA 90 bp ACCCTAAGGCAGGATCAGAGTGGCTCACACAAATGCCACCAGATATaGTCCCATCGGGGTCACATTCACAAGGAATGCACGCGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: TLRQDQSGSHKCHQI*SHRGHIHKECTRRD
Trigger: ATCCCTACGCGTGCATTCCTTGTGAATGTGACCCCGATGGGACCATATCTGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp GGCCAAACGTCTCCGAGCCCAAAGGCGCCAGTCCTTGGAGTGTTGTaGCTTCCTCTGCCTCGTAGAGATAGAAATTCAAAGGAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: GQTSPSPKAPVLGVL*LPLPRRDRNSKEQR
Trigger: TCTTTGCTCCTTTGAATTTCTATCTCTACGAGGCAGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTTGGGCTCGGAGACGTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp GTGCAAACATCGAAGGCACTCCCCTGTTACCCGGCTGCAGGACTCTaGATCGGTTACATCTATGTTGTTGTTGCAGGCACATGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: VQTSKALPCYPAAGL*IGYIYVVVAGTWLA
Trigger: TGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGGAGTGCCTTCGATGTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCACGATCTGCAAGCGTaGTCCTGGAGGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGHDLQA*SWRSAA
Trigger: AGCTGCAGACCTCCAGGACAACGCTTGCAGATCGTG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTGCTGCCCCTCAGTGTaGTGCTGGCAGTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGCCPSV*CWQSSH
Trigger: GTGTGAAGACTGCCAGCACAACACTGAGGGGCAGCA...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGAGTCACAGTGGCTACTTaGAGAGGTCCTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGVTVAT*RGPRVT
Trigger: TGTGACCCTAGGACCTCTCAAAGTAGCCACTGTGAC...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp TTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTCTCAGCTGTAAGGCATaGTTTTTGGAGACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LLGPRLTPSSVEGPWLKTLSCKA*FLETSA
Trigger: GGCAGAAGTCTCCAAAAACAATGCCTTACAGCTGAG...AGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCACTCCCAGCCTGGTGTaGGGCAGATTCAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGTPSLV*GRFSLN
Trigger: GTTCAGGCTGAATCTGCCCAACACCAGGCTGGGAGT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCACTCTCTCAACATTGTaGCTGCCAAGGGCTCCATAC +
Preference number: 5 (lower is better)
Translates to: VVPPLLKWQHGEDSQINVTLSTL*LPRAPY
Trigger: GTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGT...GACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp CGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACTAGAGTCCATTCCCATGCTTTCTGTTTCTaGCTGGGACCCCGACTGACA +
Preference number: 5 (lower is better)
Translates to: RLTPSSVEGPWLKTRVHSHAFCF*LGPRLT
Trigger: TGTCAGTCGGGGTCCCAGCAAGAAACAGAAAGCATG...GGAATGGACTCTAGTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS TCA 90 bp GTGGGAAGCAGCATGATTCTCGTAGCCGCTGGTAAGGCAAAAGACTaGGGCTTTGACTGTAGAGTCTTGGGTATGCAGTGCTCACTCCCT +
Preference number: 5 (lower is better)
Translates to: VGSSMILVAAGKAKD*GFDCRVLGMQCSLP
Trigger: AGGGAGTGAGCACTGCATACCCAAGACTCTACAGTCAAAGCCTCAGTCTTTTGCCTTACCAGCGGCTACGAGAATCATGCTGCTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp CATTCTTCGCAGTGTGCTCCGGTGACATATGACAGGCACAAGCATTaGCCTGTATCCACATCACAGGTCAAGAATGGCAGACTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: HSSQCAPVTYDRHKH*PVSTSQVKNGRLPR
Trigger: CCTTGGGAGTCTGCCATTCTTGACCTGTGATGTGGATACAGGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCACACTGCGAAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCACGATCTGCAAGCGTaGTCCTGGAGGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQHDLQA*SWRSAA
Trigger: AGCTGCAGACCTCCAGGACAACGCTTGCAGATCGTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTGCTGCCCCTCAGTGTaGTGCTGGCAGTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQCCPSV*CWQSSH
Trigger: GTGTGAAGACTGCCAGCACAACACTGAGGGGCAGCA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCCAGTCCTTGGAGTGTaGTGGCTTCCTCTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQPVLGV*WLPLPR
Trigger: ACGAGGCAGAGGAAGCCACAACACTCCAAGGACTGG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGCAAAGGCGCCAGTCCTaGGAGTGTTGTGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLQRRQS*ECCGFL
Trigger: GAGGAAGCCACAACACTCCAAGGACTGGCGCCTTTG...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATGCAGAGCTGGCAGTTaGCGCCCTGAGTGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRCRAGS*RPECCA
Trigger: TGCACAACACTCAGGGCGCAAACTGCCAGCTCTGCA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTGCAGAGCTGGCAGTTaGCGCCCTGAGTGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQCRAGS*RPECCA
Trigger: TGCACAACACTCAGGGCGCAAACTGCCAGCTCTGCA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATAACCCTTGCACCGCTTaGGAGAGGGAAGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: SPFPTLSTLLLPRAPYWDNPCTA*EREEMV
Trigger: CACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGTT...ATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTTTGGAGGGCATTCGTaGAGAGGGTCAGGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQFGGHS*RGSGSR
Trigger: ACGGCTCCCTGACCCTCTCAACGAATGCCCTCCAAA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTTTGGAGGGCATTCGTaGAGAGGGTCAGGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLFGGHS*RGSGSR
Trigger: ACGGCTCCCTGACCCTCTCAACGAATGCCCTCCAAA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGCTTCATTTCCCTGGTTaGATTTTCAGCCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: FPTLSTLLLPRAPYWDPGLHFPG*IFSLQH
Trigger: GTGCTGCAGGCTGAAAATCAAACCAGGGAAATGAAG...CCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS GCA 90 bp TGCATCGCCCAGGTGGATCACCATAATAATTTTCCTGGCACTCACTaGAACGTTTCCCGCCGTAACCTAATTTACACGGACACTGGCCTG +
Preference number: 5 (lower is better)
Translates to: CIAQVDHHNNFPGTH*NVSRRNLIYTDTGL
Trigger: CAGGCCAGTGTCCGTGTAAATTAGGTTACGGCGGGAAACGTTGCAGTGAGTGCCAGGAAAATTATTATGGTGATCCACCTGGGCGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAGGATCTGGGAGTCTTaGTGGAGAGGTTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLRIWES*WRGSGS
Trigger: GCTGCCTGAACCTCTCCACAAAGACTCCCAGATCCT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGCCCCATCATGCAGCTaGGCAGACATGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQAPSCS*ADMLMI
Trigger: GATCATCAGCATGTCTGCCAAGCTGCATGATGGGGC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGCCCCATCATGCAGCTaGGCAGACATGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLAPSCS*ADMLMI
Trigger: GATCATCAGCATGTCTGCCAAGCTGCATGATGGGGC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp CTTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACAAAGCACAAGTGACATaGAAGACAAGTAGGGAATTC +
Preference number: 5 (lower is better)
Translates to: LAGTPTDTKFCGRTLAEDKAQVT*KTSREF
Trigger: GAATTCCCTACTTGTCTTCAATGTCACTTGTGCTTT...GTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGAGCTTTCTCAGCTGCTTaGGCCTTCACCAAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGAFSAA*AFTKSF
Trigger: AAAGCTTTTGGTGAAGGCCAAAGCAGCTGAGAAAGC...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp CCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAAGAGTTTGCCCGTCCTaGAGTGATTTGAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PFPTLSTLLLPRAPYWDPRVCPS*SDLSLL
Trigger: CAACAAGCTCAAATCACTCAAGGACGGGCAAACTCT...TGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp CGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTCATTTTGTGGTCTTGATGCCTTaGCAACTTGGTCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RPFSSGSMGKTAKSMSHFVVLMP*QLGLQQ
Trigger: CTGCTGCAGACCAAGTTGCAAAGGCATCAAGACCAC...AAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAACTCCCAGCCTGGTGTaGGGCAGATTCAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSTPSLV*GRFSLN
Trigger: GTTCAGGCTGAATCTGCCCAACACCAGGCTGGGAGT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS TCA 90 bp CCAGTATCCAACAGTGCATTCTTCGCAGTGTGCTCCGGTGACATATaGCAGGCACAAGCATTGGCCTGTATCCACATCACAGGTCAAGAA +
Preference number: 5 (lower is better)
Translates to: PVSNSAFFAVCSGDI*QAQALACIHITGQE
Trigger: TTCTTGACCTGTGATGTGGATACAGGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCACACTGCGAAGAATGCACTGTTGGATACTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS GCA 90 bp CTGAGCTCCACAGATTCTGATAACAGGAATGGGCAAAATACTGATTaGTTGAGGGATCATCTGGACACAGGCAAGGACGACAGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LSSTDSDNRNGQNTD*LRDHLDTGKDDRAV
Trigger: GACAGCCCTGTCGTCCTTGCCTGTGTCCAGATGATCCCTCAAGCAATCAGTATTTTGCCCATTCCTGTTATCAGAATCTGTGGAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CCA 90 bp TCCGAGTATTTGGAGTCACAAACAATGTCTCCCACTCCCTGGGCCTaGCCAGATGTGATGTTAGGAAAGGAAGTGGCACAGTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: SEYLESQTMSPTPWA*PDVMLGKEVAQSFA
Trigger: TGCAAAAGACTGTGCCACTTCCTTTCCTAACATCACATCTGGCCAGGCCCAGGGAGTGGGAGACATTGTTTGTGACTCCAAATACTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAGGATCTGGGAGTCTTaGTGGAGAGGTTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSRIWES*WRGSGS
Trigger: GCTGCCTGAACCTCTCCACAAAGACTCCCAGATCCT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCCCAAGGGTGTGGAGCTaGGTAAAGTTTATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGPRVWS*VKFILR
Trigger: CCTGAGGATAAACTTTACCAAGCTCCACACCCTTGG...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATCGCTAGCATGGCCATaGCAAAAGCAGCTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSLAWP*QKQLPR
Trigger: TCGGGGAAGCTGCTTTTGCAATGGCCATGCTAGCGA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTTGCACTGGTCGCATTaGGCTCCTTCCACGTTCTCT +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQLHWSH*APSTFS
Trigger: AGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCAA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATTGCACTGGTCGCATTaGGCTCCTTCCACGTTCTCT +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVLHWSH*APSTFS
Trigger: AGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCAA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAGTCACAGTGGCTACTTaGAGAGGTCCTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVVTVAT*RGPRVT
Trigger: TGTGACCCTAGGACCTCTCAAAGTAGCCACTGTGAC...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAAACCCTTGCACCGCTTaGGAGAGGGAAGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVNPCTA*EREEMV
Trigger: CACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGTT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAACCCTTGCACCGCTTaGGAGAGGGAAGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLNPCTA*EREEMV
Trigger: CACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGTT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp CGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTCATTTTTTCCCTCTGAGGTCTTaGAAGTCTGCCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: RPFSSGSMGKTAKSMSHFFPLRS*KSASQT
Trigger: TGTCTGTGAGGCAGACTTCAAAGACCTCAGAGGGAA...AAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp AGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAACCCACGAACCTGTTaGTCCAAATTACGAATAATG +
Preference number: 5 (lower is better)
Translates to: SLVVPPLLKWQHGEDSQINPRTC*SKLRIM
Trigger: CATTATTCGTAATTTGGACAAACAGGTTCGTGGGTT...GATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp CTTGCTGGGACCCCGACTGACACCAAGTTCTGTGGAAGGACCCTGGCTGAAGACAGTGCTTGTCTTACGTaGGAGAATAGCATATTGTTT +
Preference number: 5 (lower is better)
Translates to: LAGTPTDTKFCGRTLAEDSACLT*ENSILF
Trigger: AAACAATATGCTATTCTCCAACGTAAGACAAGCACT...GTCTTCAGCCAGGGTCCTTCCACAGAACTTGGTGTCAGTCGGGGTCCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS GCA 90 bp TTACCCGGCTGCAGGACTCTGGATCGGTTACATCTATGTTGTTGTTaGAGGCACATGGTTGGCAAGGTGCTCCTGAAATTCTTGGATTTC +
Preference number: 5 (lower is better)
Translates to: LPGCRTLDRLHLCCC*RHMVGKVLLKFLDF
Trigger: GAAATCCAAGAATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CCA 90 bp TCAATATCCGAGTATTTGGAGTCACAAACAATGTCTCCCACTCCCTaGGCCTGGCCAGATGTGATGTTAGGAAAGGAAGTGGCACAGTCT +
Preference number: 5 (lower is better)
Translates to: SISEYLESQTMSPTP*AWPDVMLGKEVAQS
Trigger: AGACTGTGCCACTTCCTTTCCTAACATCACATCTGGCCAGGCCCAGGGAGTGGGAGACATTGTTTGTGACTCCAAATACTCGGATATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 90 bp CAGCCAGTCTCATTAACCCTTGCACCGCTTTGGAGAGGGAAGAAATaGTGTGGTCCCACTGATCAAAGCACAAGTGACATTGAAGACAAG +
Preference number: 5 (lower is better)
Translates to: QPVSLTLAPLWRGKK*CGPTDQSTSDIEDK
Trigger: CTTGTCTTCAATGTCACTTGTGCTTTGATCAGTGGGACCACACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGTTAATGAGACTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGGTGTGGCTGTTGGGTaGGTCATACGGATCATATGG +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSGVAVG*VIRIIW
Trigger: CCATATGATCCGTATGACCAACCCAACAGCCACACC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTCAATGGTGTGGCTGTaGGGTTGGTCATACGGATCA +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGSMVWL*GWSYGS
Trigger: TGATCCGTATGACCAACCCAACAGCCACACCATTGA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTCAATGGTGTGGCTGTaGGGTTGGTCATACGGATCA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQSMVWL*GWSYGS
Trigger: TGATCCGTATGACCAACCCAACAGCCACACCATTGA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACAACCTCTCCACCTGTaGAGGGTTCAATATCCGAGT +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRQPLHL*RVQYPS
Trigger: ACTCGGATATTGAACCCTCAACAGGTGGAGAGGTTG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACAACCTCTCCACCTGTaGAGGGTTCAATATCCGAGT +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVQPLHL*RVQYPS
Trigger: ACTCGGATATTGAACCCTCAACAGGTGGAGAGGTTG...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACCAAGGGTGTGGAGCTaGGTAAAGTTTATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRPRVWS*VKFILR
Trigger: CCTGAGGATAAACTTTACCAAGCTCCACACCCTTGG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATCCTGGAAGAAGTCCTaGCATCTCTCACAGTTCGGA +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVSWKKS*HLSQFG
Trigger: TCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGGA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTCACACTGCCCATTCTaGGGTGAGCACACGTTAGAA +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLSHCPF*GEHTLE
Trigger: TTCTAACGTGTGCTCACCCAAGAATGGGCAGTGTGA...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGATCACACTGCCCATTCTaGGGTGAGCACACGTTAGAA +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRSHCPF*GEHTLE
Trigger: TTCTAACGTGTGCTCACCCAAGAATGGGCAGTGTGA...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCAGCGTGGGACTCTCCTaGCAAAGGCTGAGAAAAATA +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGSVGLS*QRLRKI
Trigger: TATTTTTCTCAGCCTTTGCAAGGAGAGTCCCACGCT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGCACTTGAGGTCCCATaGCTGAGGCAATTTCAACAC +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQALEVP*LRQFQH
Trigger: GTGTTGAAATTGCCTCAGCAATGGGACCTCAAGTGC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAATCATAGCTTCCAGTaGAGCACCTGTCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRNHSFQ*STCHSS
Trigger: GCTGCTGTGACAGGTGCTCAACTGGAAGCTATGATT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGTAAAGCCTCCACAATaGAAGCATGACCCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGVKPPQ*KHDPVS
Trigger: TGAGACAGGGTCATGCTTCAATTGTGGAGGCTTTAC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTTCCCTCTGAGGTCTTaGAAGTCTGCCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQFPLRS*KSASQT
Trigger: TGTCTGTGAGGCAGACTTCAAAGACCTCAGAGGGAA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GAGTCCATTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATGTAAGGCATTGTTTTaGGAGACTTCTGCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: ESIPHSLNIVAAKGSILGCKALF*ETSACS
Trigger: TGAACAGGCAGAAGTCTCCAAAAACAATGCCTTACA...TCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAATGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGTGGTCTTGATGCCTTaGCAACTTGGTCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSVVLMP*QLGLQQ
Trigger: CTGCTGCAGACCAAGTTGCAAAGGCATCAAGACCAC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp CGCCCCTTCTCAAGTGGCAGCATGGGGAAGACAGCCAAATCAATGTCTCATTTTATTGACAGCGTGGTCTaGATGCCTTTGCAACTTGGT +
Preference number: 5 (lower is better)
Translates to: RPFSSGSMGKTAKSMSHFIDSVV*MPLQLG
Trigger: ACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAAT...AAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCAACGTTCAACTAACATaGCAGCAGGCCGAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGNVQLT*QQAEKS
Trigger: AGACTTTTCGGCCTGCTGCAATGTTAGTTGAACGTT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCAATGTCACAAGGTCTaGGATGTAGGGGCTATAAGG +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQQCHKV*DVGAIR
Trigger: CCTTATAGCCCCTACATCCAAGACCTTGTGACATTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGAGCGTGGGACTCTCCTaGCAAAGGCTGAGAAAAATA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQSVGLS*QRLRKI
Trigger: TATTTTTCTCAGCCTTTGCAAGGAGAGTCCCACGCT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACACATACAGTGTCCTTaGATCCTTGAGGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRHIQCP*ILEDGS
Trigger: ACTGCCATCCTCAAGGATCAAAGGACACTGTATGTG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGCACTGTCCTGTTACTaGGTCACATACAGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLALSCY*VTYSVL
Trigger: AAGGACACTGTATGTGACCAAGTAACAGGACAGTGC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGGCACTGTCCTGTTACTaGGTCACATACAGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGALSCY*VTYSVL
Trigger: AAGGACACTGTATGTGACCAAGTAACAGGACAGTGC...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGTAAAGCCTCCACAATaGAAGCATGACCCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRVKPPQ*KHDPVS
Trigger: TGAGACAGGGTCATGCTTCAATTGTGGAGGCTTTAC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGTTACATCTATGTTGTaGTTGCAGGCACATGGTTGG +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGVTSML*LQAHGW
Trigger: CCAACCATGTGCCTGCAACAACAACATAGATGTAAC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATTCCCTCTGAGGTCTTaGAAGTCTGCCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSFPLRS*KSASQT
Trigger: TGTCTGTGAGGCAGACTTCAAAGACCTCAGAGGGAA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TTCCCCACTCTCTCAACATTGTTGCTGCCAAGGGCTCCATACTGGGATCCAGGGATTAAGGACACTGGATaGCAAATCAATTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FPTLSTLLLPRAPYWDPGIKDTG*QINFFL
Trigger: CAGGAAGAAATTGATTTGCAATCCAGTGTCCTTAAT...CCCTGGATCCCAGTATGGAGCCCTTGGCAGCAACAATGTTGAGAGAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACTCAGCTGTAAGGCATaGTTTTTGGAGACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRLSCKA*FLETSA
Trigger: GGCAGAAGTCTCCAAAAACAATGCCTTACAGCTGAG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAGAGTTTGCCCGTCCTaGAGTGATTTGAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLRVCPS*SDLSLL
Trigger: CAACAAGCTCAAATCACTCAAGGACGGGCAAACTCT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTCATTTCCCTGGTTaGATTTTCAGCCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGLHFPG*IFSLQH
Trigger: GTGCTGCAGGCTGAAAATCAAACCAGGGAAATGAAG...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGATTGACAGCGTGGTCTaGATGCCTTTGCAACTTGGT +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGIDSVV*MPLQLG
Trigger: ACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAAT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGATTGACAGCGTGGTCTaGATGCCTTTGCAACTTGGT +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLIDSVV*MPLQLG
Trigger: ACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAAT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGTTATTCTTCTTATCTaGGCCTCTGTATCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGVILLI*ASVSPA
Trigger: GGCTGGAGATACAGAGGCCAAGATAAGAAGAATAAC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS CCA 90 bp AGGGAATCATTTTGCCTCCTTCCAAGCAAAGCATCCCCAAGGGTGTaGAGCTTGGTAAAGTTTATCCTCAGGTTTGTCAATGTCACAAGG +
Preference number: 5 (lower is better)
Translates to: RESFCLLPSKASPRV*SLVKFILRFVNVTR
Trigger: CCTTGTGACATTGACAAACCTGAGGATAAACTTTACCAAGCTCCACACCCTTGGGGATGCTTTGCTTGGAAGGAGGCAAAATGATTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGGTGTGGCTGTTGGGTaGGTCATACGGATCATATGG +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSGVAVG*VIRIIW
Trigger: CCATATGATCCGTATGACCAACCCAACAGCCACACC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGATCAAGGGAATCATTTaGCCTCCTTCCAAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLIKGII*PPSKQS
Trigger: GCTTTGCTTGGAAGGAGGCAAAATGATTCCCTTGAT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATGCTGCCCCTCAGTGTaGTGCTGGCAGTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSCCPSV*CWQSSH
Trigger: GTGTGAAGACTGCCAGCACAACACTGAGGGGCAGCA...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGGGAAAGGGAATGTTGTaGACAGCAAATCTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQGKGML*TANLKP
Trigger: TGGCTTGAGATTTGCTGTCAACAACATTCCCTTTCC...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGCAAAAGACTGAGGCTTaGACTGTAGAGTCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQQKTEA*TVESWV
Trigger: TACCCAAGACTCTACAGTCAAAGCCTCAGTCTTTTG...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGACATCTATGTTGTTGTaGCAGGCACATGGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLTSMLL*QAHGWQ
Trigger: TTGCCAACCATGTGCCTGCAACAACAACATAGATGT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTCGGTTACATCTATGTaGTTGTTGCAGGCACATGGT +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQSVTSM*LLQAHG
Trigger: ACCATGTGCCTGCAACAACAACATAGATGTAACCGA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGTCACAGTGGCTACTTaGAGAGGTCCTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSVTVAT*RGPRVT
Trigger: TGTGACCCTAGGACCTCTCAAAGTAGCCACTGTGAC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCGATTTTGGGATGGAATaGGTAGGTGAATGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGDFGME*VGECQA
Trigger: TGCTTGACATTCACCTACCAATTCCATCCCAAAATC...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAGAGTTTGCCCGTCCTaGAGTGATTTGAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSRVCPS*SDLSLL
Trigger: CAACAAGCTCAAATCACTCAAGGACGGGCAAACTCT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACTTCATTTCCCTGGTTaGATTTTCAGCCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSLHFPG*IFSLQH
Trigger: GTGCTGCAGGCTGAAAATCAAACCAGGGAAATGAAG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGTGGTCTTGATGCCTTaGCAACTTGGTCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSVVLMP*QLGLQQ
Trigger: CTGCTGCAGACCAAGTTGCAAAGGCATCAAGACCAC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAGTTATTCTTCTTATCTaGGCCTCTGTATCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRVILLI*ASVSPA
Trigger: GGCTGGAGATACAGAGGCCAAGATAAGAAGAATAAC...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCAGAGCCCCAGGGGCTaGTACATCAGAAACCAGAAA +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSQSPRG*YIRNQK
Trigger: TTTCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS GCA 90 bp AATCCTTTCTATTTCAGACACGTTCCCTCTGAGGTCTTTGAAGTCTaGCTCACAGACAGGCAGGGTCTCTCTTTTATCTTCCATGTTAGC +
Preference number: 5 (lower is better)
Translates to: NPFYFRHVPSEVFEV*LTDRQGLSFIFHVS
Trigger: GCTAACATGGAAGATAAAAGAGAGACCCTGCCTGTCTGTGAGGCAGACTTCAAAGACCTCAGAGGGAACGTGTCTGAAATAGAAAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS GCA 90 bp ACTATCATGCTCACTTTGAGTGCACTAGTAAGCTTTAAAGTATCTTaGCTGGTCACAGTGGCTACTTTGAGAGGTCCTAGGGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: TIMLTLSALVSFKVS*LVTVATLRGPRVTV
Trigger: GACTGTGACCCTAGGACCTCTCAAAGTAGCCACTGTGACCAGGCAAGATACTTTAAAGCTTACTAGTGCACTCAAAGTGAGCATGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471677.5
ENST00000475469.1
CDS CCA 90 bp GACATTCTCAATGGTGTGGCTGTTGGGTTGGTCATACGGATCATATaGAAATCTAGAGTCACAGATGAAGCATTTTTGTTCCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: DILNGVAVGLVIRII*KSRVTDEAFLFPLQ
Trigger: CTGGAGGGGGAACAAAAATGCTTCATCTGTGACTCTAGATTTCCATATGATCCGTATGACCAACCCAACAGCCACACCATTGAGAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAACAGATGAAGCATTTTaGTTCCCCCTCCAGGTAACT +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSTDEAF*FPLQVT
Trigger: AGTTACCTGGAGGGGGAACAAAAATGCTTCATCTGT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAACGTTCAACTAACATaGCAGCAGGCCGAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSNVQLT*QQAEKS
Trigger: AGACTTTTCGGCCTGCTGCAATGTTAGTTGAACGTT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACCACGATCTGCAAGCGTaGTCCTGGAGGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYHDLQA*SWRSAA
Trigger: AGCTGCAGACCTCCAGGACAACGCTTGCAGATCGTG...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGCCAGTCCTTGGAGTGTaGTGGCTTCCTCTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWPVLGV*WLPLPR
Trigger: ACGAGGCAGAGGAAGCCACAACACTCCAAGGACTGG...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGCAAAGGCGCCAGTCCTaGGAGTGTTGTGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YLHTVLMILKINWGGWALQRRQS*ECCGFL
Trigger: GAGGAAGCCACAACACTCCAAGGACTGGCGCCTTTG...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAACAGGAAAGGGAATGTaGTTGACAGCAAATCTCAAG +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRTGKGM*LTANLK
Trigger: CTTGAGATTTGCTGTCAACAACATTCCCTTTCCTGT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAACAGGAAAGGGAATGTaGTTGACAGCAAATCTCAAG +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVTGKGM*LTANLK
Trigger: CTTGAGATTTGCTGTCAACAACATTCCCTTTCCTGT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCACAAAAGACTGAGGCTTaGACTGTAGAGTCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSQKTEA*TVESWV
Trigger: TACCCAAGACTCTACAGTCAAAGCCTCAGTCTTTTG...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTATCATCTAAGTCCTGCTaGCTGCAGAAATTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVSSKSC*LQKFSN
Trigger: ATTGGAGAATTTCTGCAGCAAGCAGGACTTAGATGA...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGCACTTGAGGTCCCATaGCTGAGGCAATTTCAACAC +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSALEVP*LRQFQH
Trigger: GTGTTGAAATTGCCTCAGCAATGGGACCTCAAGTGC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCAAAATACTGATTGCTaGAGGGATCATCTGGACACA +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGQNTDC*RDHLDT
Trigger: TGTGTCCAGATGATCCCTCAAGCAATCAGTATTTTG...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGACAAAATACTGATTGCTaGAGGGATCATCTGGACACA +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRQNTDC*RDHLDT
Trigger: TGTGTCCAGATGATCCCTCAAGCAATCAGTATTTTG...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGTGCTCCTGAAATTCTaGGATTTCCATAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLVLLKF*DFHRNQ
Trigger: CTGGTTTCTATGGAAATCCAAGAATTTCAGGAGCAC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGTTACATCTATGTTGTaGTTGCAGGCACATGGTTGG +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSVTSML*LQAHGW
Trigger: CCAACCATGTGCCTGCAACAACAACATAGATGTAAC...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTGTAAGGCATTGTTTTaGGAGACTTCTGCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQCKALF*ETSACS
Trigger: TGAACAGGCAGAAGTCTCCAAAAACAATGCCTTACA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTGTAAGGCATTGTTTTaGGAGACTTCTGCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGCKALF*ETSACS
Trigger: TGAACAGGCAGAAGTCTCCAAAAACAATGCCTTACA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGGATTTTGGGATGGAATaGGTAGGTGAATGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLDFGME*VGECQA
Trigger: TGCTTGACATTCACCTACCAATTCCATCCCAAAATC...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACGCTGAAGCAGGAGAATaGCTTGCACTCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYAEAGE*LALRRR
Trigger: CCGCCTCCTGAGTGCAAGCAATTCTCCTGCTTCAGC...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGAGGATCTGGGAGTCTTaGTGGAGAGGTTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWRIWES*WRGSGS
Trigger: GCTGCCTGAACCTCTCCACAAAGACTCCCAGATCCT...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGAAGGGTCAGTTGAAATaGCATTCTTTTGTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQKGQLK*HSFVRR
Trigger: TCTCCTGACAAAAGAATGCAATTTCAACTGACCCTT...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAAAGGGTCAGTTGAAATaGCATTCTTTTGTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVKGQLK*HSFVRR
Trigger: TCTCCTGACAAAAGAATGCAATTTCAACTGACCCTT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGCATTGTCGCTAGCATGGCCATaGCAAAAGCAGCTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: YLHTVLMILKINWGGWALSLAWP*QKQLPR
Trigger: TCGGGGAAGCTGCTTTTGCAATGGCCATGCTAGCGA...CAATGCCCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATTGCACTGGTCGCATTaGGCTCCTTCCACGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSLHWSH*APSTFS
Trigger: AGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCAA...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCATCATCTAAGTCCTGCTaGCTGCAGAAATTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSSKSC*LQKFSN
Trigger: ATTGGAGAATTTCTGCAGCAAGCAGGACTTAGATGA...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCACATACAGTGTCCTTaGATCCTTGAGGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSHIQCP*ILEDGS
Trigger: ACTGCCATCCTCAAGGATCAAAGGACACTGTATGTG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAAGTACCCGTATAACCTaGAAGACAATTGCAGATTAC +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVSTRIT*KTIADY
Trigger: GTAATCTGCAATTGTCTTCAAGGTTATACGGGTACT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAAAGCACAAGTGACATaGAAGACAAGTAGGGAATTC +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLKAQVT*KTSREF
Trigger: GAATTCCCTACTTGTCTTCAATGTCACTTGTGCTTT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCATTAAGGACACTGGATaGCAAATCAATTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: RKVEDIVSISQVQQSPRGIKDTG*QINFFL
Trigger: CAGGAAGAAATTGATTTGCAATCCAGTGTCCTTAAT...GCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp GGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTAAACCCACGAACCTGTTaGTCCAAATTACGAATAATG +
Preference number: 5 (lower is better)
Translates to: GRRHCQYFTGSTEPQGLVNPRTC*SKLRIM
Trigger: CATTATTCGTAATTTGGACAAACAGGTTCGTGGGTT...TACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCCTCAGCTGTAAGGCATaGTTTTTGGAGACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSLSCKA*FLETSA
Trigger: GGCAGAAGTCTCCAAAAACAATGCCTTACAGCTGAG...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGCTTTCTCAGCTGCTTaGGCCTTCACCAAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSAFSAA*AFTKSF
Trigger: AAAGCTTTTGGTGAAGGCCAAAGCAGCTGAGAAAGC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGAAGCAGGAGAATTGCTaGCACTCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWKQENC*HSGGGG
Trigger: ACCTCCGCCTCCTGAGTGCAAGCAATTCTCCTGCTT...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS TCA 90 bp TACATCTATGTTGTTGTTGCAGGCACATGGTTGGCAAGGTGCTCCTaGAATTCTTGGATTTCCATAGAAACCAGTAGAGCATTCTCCACA +
Preference number: 5 (lower is better)
Translates to: YIYVVVAGTWLARCS*NSWISIETSRAFST
Trigger: TGTGGAGAATGCTCTACTGGTTTCTATGGAAATCCAAGAATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCACAGATGAAGCATTTTaGTTCCCCCTCCAGGTAACT +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSTDEAF*FPLQVT
Trigger: AGTTACCTGGAGGGGGAACAAAAATGCTTCATCTGT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGGTGTGGCTGTTGGGTaGGTCATACGGATCATATGG +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWGVAVG*VIRIIW
Trigger: CCATATGATCCGTATGACCAACCCAACAGCCACACC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGAAGACCATTTTCAGATaGCCACCATTTCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: KVEDIVSISQVQQSPRGLKTIFR*PPFLFS
Trigger: AGAGAAAAGAAATGGTGGCAATCTGAAAATGGTCTT...CAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGAAGACCATTTTCAGATaGCCACCATTTCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGKTIFR*PPFLFS
Trigger: AGAGAAAAGAAATGGTGGCAATCTGAAAATGGTCTT...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGGAAGGTAGAAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGTCAATATCCGAGTATTaGGAGTCACAAACAATGTCT +
Preference number: 5 (lower is better)
Translates to: KEGRRHCQYFTGSTEPQGSISEY*ESQTMS
Trigger: AGACATTGTTTGTGACTCCAAATACTCGGATATTGA...CCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTTCTACCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGCCACACTGAGCAGTCAATATCCGAGTATTaGGAGTCACAAACAATGTCT +
Preference number: 5 (lower is better)
Translates to: IMKWHFPGGISTSSHTEQSISEY*ESQTMS
Trigger: AGACATTGTTTGTGACTCCAAATACTCGGATATTGA...CTGCTCAGTGTGGCTGGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACAACCTCTCCACCTGTaGAGGGTTCAATATCCGAGT +
Preference number: 5 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSQPLHL*RVQYPS
Trigger: ACTCGGATATTGAACCCTCAACAGGTGGAGAGGTTG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAGTTTATCCTCAGGTTaGTCAATGTCACAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSLSSG*SMSQGL
Trigger: AAGACCTTGTGACATTGACAAACCTGAGGATAAACT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACCAAGGGTGTGGAGCTaGGTAAAGTTTATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSPRVWS*VKFILR
Trigger: CCTGAGGATAAACTTTACCAAGCTCCACACCCTTGG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCATCAAGGGAATCATTTaGCCTCCTTCCAAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSIKGII*PPSKQS
Trigger: GCTTTGCTTGGAAGGAGGCAAAATGATTCCCTTGAT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGGAAAGGGAATGTTGTaGACAGCAAATCTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSGKGML*TANLKP
Trigger: TGGCTTGAGATTTGCTGTCAACAACATTCCCTTTCC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAGTACCCGTATAACCTaGAAGACAATTGCAGATTAC +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSSTRIT*KTIADY
Trigger: GTAATCTGCAATTGTCTTCAAGGTTATACGGGTACT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCACATCTATGTTGTTGTaGCAGGCACATGGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSTSMLL*QAHGWQ
Trigger: TTGCCAACCATGTGCCTGCAACAACAACATAGATGT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AAGACATTGTCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAAAAGCACAAGTGACATaGAAGACAAGTAGGGAATTC +
Preference number: 5 (lower is better)
Translates to: KTLSVFHRFNRAPGACTSKAQVT*KTSREF
Trigger: GAATTCCCTACTTGTCTTCAATGTCACTTGTGCTTT...TGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGACAATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAATTAAGGACACTGGATaGCAAATCAATTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRIKDTG*QINFFL
Trigger: CAGGAAGAAATTGATTTGCAATCCAGTGTCCTTAAT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp TCAGTATTTCACAGGTTCAACAGAGCCCCAGGGGCTTGTACATCAGAAACCAGAAGTGCTTGTCTTACGTaGGAGAATAGCATATTGTTT +
Preference number: 5 (lower is better)
Translates to: SVFHRFNRAPGACTSETRSACLT*ENSILF
Trigger: AAACAATATGCTATTCTCCAACGTAAGACAAGCACT...TCTGGTTTCTGATGTACAAGCCCCTGGGGCTCTGTTGAACCTGTGAAATACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGTCAATGGTGTGGCTGTaGGGTTGGTCATACGGATCA +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWSMVWL*GWSYGS
Trigger: TGATCCGTATGACCAACCCAACAGCCACACCATTGA...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCACAATGTCACAAGGTCTaGGATGTAGGGGCTATAAGG +
Preference number: 5 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSQCHKV*DVGAIR
Trigger: CCTTATAGCCCCTACATCCAAGACCTTGTGACATTG...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCGTGCTCCTGAAATTCTaGGATTTCCATAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSVLLKF*DFHRNQ
Trigger: CTGGTTTCTATGGAAATCCAAGAATTTCAGGAGCAC...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS CCA 90 bp TTCTTATATTTCCCAGTTTTTCCCTCAGCTGTAAGGCATTGTTTTTaGAGACTTCTGCCTGTTCACTTATACTTTCGATCTGCCATGGTC +
Preference number: 5 (lower is better)
Translates to: FLYFPVFPSAVRHCF*RLLPVHLYFRSAMV
Trigger: GACCATGGCAGATCGAAAGTATAAGTGAACAGGCAGAAGTCTCCAAAAACAATGCCTTACAGCTGAGGGAAAAACTGGGAAATATAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475572.1
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAGTTTATCCTCAGGTTaGTCAATGTCACAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSSLSSG*SMSQGL
Trigger: AAGACCTTGTGACATTGACAAACCTGAGGATAAACT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS-3UTR CAA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTTCCTGGAAGAAGTCCTaGCATCTCTCACAGTTCGGA +
Preference number: 5 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCSWKKS*HLSQFG
Trigger: TCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGGA...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp ACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTGTTCACACTGCCCATTCTaGGGTGAGCACACGTTAGAA +
Preference number: 5 (lower is better)
Translates to: TILYNSVEGGMKLVPSYCSHCPF*GEHTLE
Trigger: TTCTAACGTGTGCTCACCCAAGAATGGGCAGTGTGA...ACAGTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACAGCGTGGGACTCTCCTaGCAAAGGCTGAGAAAAATA +
Preference number: 5 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYSVGLS*QRLRKI
Trigger: TATTTTTCTCAGCCTTTGCAAGGAGAGTCCCACGCT...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TACTTTCCCCTTTCAATTATGAAGTGGCATTTTCCTGGTGGCATTTCAACCTCCAACCCACGAACCTGTTaGTCCAAATTACGAATAATG +
Preference number: 5 (lower is better)
Translates to: YFPLSIMKWHFPGGISTSNPRTC*SKLRIM
Trigger: CATTATTCGTAATTTGGACAAACAGGTTCGTGGGTT...GGAGGTTGAAATGCCACCAGGAAAATGCCACTTCATAATTGAAAGGGGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000388781.8
CDS TCA 90 bp ACACTGAGTACCCGTATAACCTTGAAGACAATTGCAGATTACATCTaGGCTCCACAGATTCTGATAACAGGAATGGGCAAAATACTGATT +
Preference number: 5 (lower is better)
Translates to: TLSTRITLKTIADYI*APQILITGMGKILI
Trigger: AATCAGTATTTTGCCCATTCCTGTTATCAGAATCTGTGGAGCTCAGATGTAATCTGCAATTGTCTTCAAGGTTATACGGGTACTCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS-3UTR CAA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACACAGATGAAGCATTTTaGTTCCCCCTCCAGGTAACT +
Preference number: 5 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYTDEAF*FPLQVT
Trigger: AGTTACCTGGAGGGGGAACAAAAATGCTTCATCTGT...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGAACGTTCAACTAACATaGCAGCAGGCCGAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWNVQLT*QQAEKS
Trigger: AGACTTTTCGGCCTGCTGCAATGTTAGTTGAACGTT...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACATCAAGGGAATCATTTaGCCTCCTTCCAAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYIKGII*PPSKQS
Trigger: GCTTTGCTTGGAAGGAGGCAAAATGATTCCCTTGAT...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGGGAAAGGGAATGTTGTaGACAGCAAATCTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWGKGML*TANLKP
Trigger: TGGCTTGAGATTTGCTGTCAACAACATTCCCTTTCC...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAACAGGAAAGGGAATGTaGTTGACAGCAAATCTCAAG +
Preference number: 5 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSTGKGM*LTANLK
Trigger: CTTGAGATTTGCTGTCAACAACATTCCCTTTCCTGT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGCAAAAGACTGAGGCTTaGACTGTAGAGTCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWQKTEA*TVESWV
Trigger: TACCCAAGACTCTACAGTCAAAGCCTCAGTCTTTTG...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS TCA 90 bp CATCTGTCCTGTAATCCTCACAGAGTTGCATATGTTTCTGTATTTTaGCAAGTTCATCGGTTAGATTTTGGGATGGAATTGGTAGGTGAA +
Preference number: 5 (lower is better)
Translates to: HLSCNPHRVAYVSVF*QVHRLDFGMELVGE
Trigger: TTCACCTACCAATTCCATCCCAAAATCTAACCGATGAACTTGTCAAAATACAGAAACATATGCAACTCTGTGAGGATTACAGGACAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000475572.1
CDS-3UTR CAA 90 bp TCCCACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCAAAGACCATTTTCAGATaGCCACCATTTCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SHTILYNSVEGGMKLVPSKTIFR*PPFLFS
Trigger: AGAGAAAAGAAATGGTGGCAATCTGAAAATGGTCTT...TGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AACTGGTACCTTCATACTGTACTAATGATCTTAAAAATTAATTGGGGAGGCTGGAGTTTATCCTCAGGTTaGTCAATGTCACAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: NWYLHTVLMILKINWGGWSLSSG*SMSQGL
Trigger: AAGACCTTGTGACATTGACAAACCTGAGGATAAACT...CCAGCCTCCCCAATTAATTTTTAAGATCATTAGTACAGTATGAAGGTACCAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS-3UTR CAA 90 bp AACTCCACTTCTAAATACTTTATCCAAAATTATGCCCACGCATGCTTTCTGTTTGATTTTGGGATGGAATaGGTAGGTGAATGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: NSTSKYFIQNYAHACFLFDFGME*VGECQA
Trigger: TGCTTGACATTCACCTACCAATTCCATCCCAAAATC...AAACAGAAAGCATGCGTGGGCATAATTTTGGATAAAGTATTTAGAAGTGGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS-3UTR CAA 90 bp CACACAATTCTATATAATTCTGTTGAAGGTGGGATGAAACTGGTACCTTCATACTCAATATCCGAGTATTaGGAGTCACAAACAATGTCT +
Preference number: 5 (lower is better)
Translates to: HTILYNSVEGGMKLVPSYSISEY*ESQTMS
Trigger: AGACATTGTTTGTGACTCCAAATACTCGGATATTGA...GTATGAAGGTACCAGTTTCATCCCACCTTCAACAGAATTATATAGAATTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS TCA 72 bp GCACTGGCCTCCAAGTCGGCTGCAGCTGGATCCGACTaGGCCCTGGGGGTGACACTTGCAGGCCACAGCCCC +
Preference number: 6 (lower is better)
Translates to: ALASKSAAAGSD*ALGVTLAGHSP
Trigger: GGGGCTGTGGCCTGCAAGTGTCACCCCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 72 bp CGGGACCCCTACACTTCCTGTGCCCCTTCCGGCCCGTaGAGAGAGCACCGCCACAGGGCAAGGGCACACATG +
Preference number: 6 (lower is better)
Translates to: RDPYTSCAPSGP*REHRHRARAHM
Trigger: CATGTGTGCCCTTGCCCTGTGGCGGTGCTCTCTGCACGGGCCGGAAGGGGCACAGGAAGTGTAGGGGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 72 bp TCCTGGCTGTGTCCCCGGGCACAGCGATCACATCTCTaGCCGCTGACACCCTCCCGGCAGCGGCACATGCCT +
Preference number: 6 (lower is better)
Translates to: SWLCPRAQRSHL*PLTPSRQRHMP
Trigger: AGGCATGTGCCGCTGCCGGGAGGGTGTCAGCGGCCAGAGATGTGATCGCTGTGCCCGGGGACACAGCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 72 bp GGTTACAGTCGCAGGGCTGGCAGCCCAGGGGGTCGGTaGCGCTTAGTCCGTAGTGGTTGGGTTTGCACTGGT +
Preference number: 6 (lower is better)
Translates to: GYSRRAGSPGGR*RLVRSGWVCTG
Trigger: ACCAGTGCAAACCCAACCACTACGGACTAAGCGCCACCGACCCCCTGGGCTGCCAGCCCTGCGACTGTAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp CACAGAGGCAAGCTCCCCCACCAGGGGGACACTCCATaGGACTCACGCCGGAAGCATGGCAGGAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: HRGKLPHQGDTP*DSRRKHGRSIF
Trigger: GAAGATGCTCCTGCCATGCTTCCGGCGTGAGTCCCATGGAGTGTCCCCCTGGTGGGGGAGCTTGCCTCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000471677.5
ENST00000475469.1
CDS CCA 72 bp GTTTACACTGGCACTGGCCTCCAAGTCGGCTGCAGCTaGATCCGACTGAGCCCTGGGGGTGACACTTGCAGG +
Preference number: 6 (lower is better)
Translates to: VYTGTGLQVGCS*IRLSPGGDTCR
Trigger: CCTGCAAGTGTCACCCCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CCA 72 bp CAGCAGCGCCCGACCACAAGAGGTTTACACTGGCACTaGCCTCCAAGTCGGCTGCAGCTGGATCCGACTGAG +
Preference number: 6 (lower is better)
Translates to: QQRPTTRGLHWH*PPSRLQLDPTE
Trigger: CTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTGTGGTCGGGCGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CCA 72 bp CTGTCACAGCAGCGCCCGACCACAAGAGGTTTACACTaGCACTGGCCTCCAAGTCGGCTGCAGCTGGATCCG +
Preference number: 6 (lower is better)
Translates to: LSQQRPTTRGLH*HWPPSRLQLDP
Trigger: CGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTGTGGTCGGGCGCTGCTGTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CCA 72 bp GCTGACACCCTCCCGGCAGCGGCACATGCCTGTGTCTaGATCACAGATGGGCTTCTGGGTACCTGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: ADTLPAAAHACV*ITDGLLGTCPV
Trigger: AACAGGGCAGGTACCCAGAAGCCCATCTGTGATCCAGACACAGGCATGTGCCGCTGCCGGGAGGGTGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS GCA 72 bp CAAGAGGTTTACACTGGCACTGGCCTCCAAGTCGGCTaGAGCTGGATCCGACTGAGCCCTGGGGGTGACACT +
Preference number: 6 (lower is better)
Translates to: QEVYTGTGLQVG*SWIRLSPGGDT
Trigger: AGTGTCACCCCCAGGGCTCAGTCGGATCCAGCTGCAGCCGACTTGGAGGCCAGTGCCAGTGTAAACCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp AGTAGCCAGGGGCTGGTTCAGAGCAGCTACGGCCAGTaGCATGTGGGCGGCATTCACACTGCCCATTCTTGG +
Preference number: 6 (lower is better)
Translates to: SSQGLVQSSYGQ*HVGGIHTAHSW
Trigger: CCAAGAATGGGCAGTGTGAATGCCGCCCACATGTCACTGGCCGTAGCTGCTCTGAACCAGCCCCTGGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp GCTGCGTGTTCCTGCCCACCAGGAGATCACCAGTGGTaGGATGACAGGCACCCCTGTTGCAGTCATCTTGAG +
Preference number: 6 (lower is better)
Translates to: AACSCPPGDHQW*DDRHPCCSHLE
Trigger: CTCAAGATGACTGCAACAGGGGTGCCTGTCATCCCACCACTGGTGATCTCCTGGTGGGCAGGAACACGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp AGGCAGCGATCACAGCGGCGGCCAGACACCTCTCCATaGCAGGGGCACTGTCCTGTTACTTGGTCACATACA +
Preference number: 6 (lower is better)
Translates to: RQRSQRRPDTSP*QGHCPVTWSHT
Trigger: TGTATGTGACCAAGTAACAGGACAGTGCCCCTGCCATGGAGAGGTGTCTGGCCGCCGCTGTGATCGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp CACAAGGAATGCACGCGTAGGGATCTGAGATGGTCTTaGGCGGGTCCCTGTAGAAGAGGGGTCTGCAGCGGT +
Preference number: 6 (lower is better)
Translates to: HKECTRRDLRWS*AGPCRRGVCSG
Trigger: ACCGCTGCAGACCCCTCTTCTACAGGGACCCGCTCAAGACCATCTCAGATCCCTACGCGTGCATTCCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS GCA 72 bp ACAGCTGCACGATCTGCAAGCGTTGTCCTGGAGGTCTaGAGCTGGCCTCCAAGGAGCATCCTGGAAGAAGTC +
Preference number: 6 (lower is better)
Translates to: TAARSASVVLEV*SWPPRSILEEV
Trigger: GACTTCTTCCAGGATGCTCCTTGGAGGCCAGCTGCAGACCTCCAGGACAACGCTTGCAGATCGTGCAGCTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp CACTGGCCGGCCACAGACCCTAAGGCAGGATCAGAGTaGCTCACACAAATGCCACCAGATATGGTCCCATCG +
Preference number: 6 (lower is better)
Translates to: HWPATDPKAGSE*LTQMPPDMVPS
Trigger: CGATGGGACCATATCTGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTTAGGGTCTGTGGCCGGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 72 bp CTGGCCAAACGTCTCCGAGCCCAAAGGCGCCAGTCCTaGGAGTGTTGTGGCTTCCTCTGCCTCGTAGAGATA +
Preference number: 6 (lower is better)
Translates to: LAKRLRAQRRQS*ECCGFLCLVEI
Trigger: TATCTCTACGAGGCAGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTTGGGCTCGGAGACGTTTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 72 bp ACAGGGTTCCCAGGAACTGGCTCTCCTAAAACAACGTaGACAGCAGGACTCTGGCCAAACGTCTCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: TGFPGTGSPKTT*TAGLWPNVSEP
Trigger: GGGCTCGGAGACGTTTGGCCAGAGTCCTGCTGTTCACGTTGTTTTAGGAGAGCCAGTTCCTGGGAACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 72 bp GTGCCACTGCACTGCAGCAGAGTCCACCAGGACATGTaGATGAGCGTGGGACTCTCCTTGCAAAGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: VPLHCSRVHQDM*MSVGLSLQRLR
Trigger: TCTCAGCCTTTGCAAGGAGAGTCCCACGCTCATTCACATGTCCTGGTGGACTCTGCTGCAGTGCAGTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418464.1
CDS CCA 72 bp TCCTGGAGGTCTGCAGCTGGCCTCCAAGGAGCATCCTaGAAGAAGTCCTTGCATCTCTCACAGTTCGGACCA +
Preference number: 6 (lower is better)
Translates to: SWRSAAGLQGAS*KKSLHLSQFGP
Trigger: TGGTCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAGGCCAGCTGCAGACCTCCAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 72 bp AGGCCACCGCTTGCCAGGTACGTAGTCATGTCAAAGTaGCAGCGGCTGGAGTGGCTATTACAGCTGCACGAT +
Preference number: 6 (lower is better)
Translates to: RPPLARYVVMSK*QRLEWLLQLHD
Trigger: ATCGTGCAGCTGTAATAGCCACTCCAGCCGCTGTCACTTTGACATGACTACGTACCTGGCAAGCGGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS GCA 72 bp GCCTGTGTCTGGATCACAGATGGGCTTCTGGGTACCTaGCCTGTTACAATCACATGGAATGCATCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: ACVWITDGLLGT*PVTITWNASPR
Trigger: CCTGGGCGATGCATTCCATGTGATTGTAACAGGGCAGGTACCCAGAAGCCCATCTGTGATCCAGACACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 72 bp CATTTGGCTCCTTCCACGTTCTCTTTACAAAGGCACTaGCCGGCCACAGACCCTAAGGCAGGATCAGAGTGG +
Preference number: 6 (lower is better)
Translates to: HLAPSTFSLQRH*PATDPKAGSEW
Trigger: CCACTCTGATCCTGCCTTAGGGTCTGTGGCCGGCCAGTGCCTTTGTAAAGAGAACGTGGAAGGAGCCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp CAAGCATTGGCCTGTATCCACATCACAGGTCAAGAATaGCAGACTCCCAAGGGGGTTACAGTCGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: QALACIHITGQE*QTPKGVTVAGL
Trigger: CAGCCCTGCGACTGTAACCCCCTTGGGAGTCTGCCATTCTTGACCTGTGATGTGGATACAGGCCAATGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 90 bp AGTGACATGGGTGACAGCCGTGATGCCCCAAATCATAGCTTCCAGTaGAGCACCTGTCACAGCAGCGCCCGACCACAAGAGGTTTACACT +
Preference number: 6 (lower is better)
Translates to: SDMGDSRDAPNHSFQ*STCHSSARPQEVYT
Trigger: AGTGTAAACCTCTTGTGGTCGGGCGCTGCTGTGACAGGTGCTCAACTGGAAGCTATGATTTGGGGCATCACGGCTGTCACCCATGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CAA 90 bp CATGGCAGGGGCACTGTCCTGTTACTTGGTCACATACAGTGTCCTTaGATCCTTGAGGATGGCAGTGACATGGGTGACAGCCGTGATGCC +
Preference number: 6 (lower is better)
Translates to: HGRGTVLLLGHIQCP*ILEDGSDMGDSRDA
Trigger: GGCATCACGGCTGTCACCCATGTCACTGCCATCCTCAAGGATCAAAGGACACTGTATGTGACCAAGTAACAGGACAGTGCCCCTGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 72 bp CAGACCCTAAGGCAGGATCAGAGTGGCTCACACAAATaGCACCAGATATGGTCCCATCGGGGTCACATTCAC +
Preference number: 6 (lower is better)
Translates to: QTLRQDQSGSHK*HQIWSHRGHIH
Trigger: GTGAATGTGACCCCGATGGGACCATATCTGGTGGCATTTGTGTGAGCCACTCTGATCCTGCCTTAGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS GCA 72 bp TGCAGCAGGGAAAGTCCATCCTCCAGCCCTGATCGCTaGTTTGCTAACTCCAGCTCACTCTTCATTTCCCTG +
Preference number: 6 (lower is better)
Translates to: CSRESPSSSPDR*FANSSSLFISL
Trigger: CAGGGAAATGAAGAGTGAGCTGGAGTTAGCAAAGCAGCGATCAGGGCTGGAGGATGGACTTTCCCTGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 72 bp GTTCAGCAAACCTATTACAAGGGCAAGGGTGGCAGCTaGGAAATCCAAAGTAGCCTGCCAGGCAGCGATCAC +
Preference number: 6 (lower is better)
Translates to: VQQTYYKGKGGS*EIQSSLPGSDH
Trigger: GTGATCGCTGCCTGGCAGGCTACTTTGGATTTCCCAGCTGCCACCCTTGCCCTTGTAATAGGTTTGCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CCA 72 bp TCGAAGGCACTCCCCTGTTACCCGGCTGCAGGACTCTaGATCGGTTACATCTATGTTGTTGTTGCAGGCACA +
Preference number: 6 (lower is better)
Translates to: SKALPCYPAAGL*IGYIYVVVAGT
Trigger: TGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGGAGTGCCTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CAA 72 bp ACGTCTCCGAGCCCAAAGGCGCCAGTCCTTGGAGTGTaGTGGCTTCCTCTGCCTCGTAGAGATAGAAATTCA +
Preference number: 6 (lower is better)
Translates to: TSPSPKAPVLGV*WLPLPRRDRNS
Trigger: TGAATTTCTATCTCTACGAGGCAGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTTGGGCTCGGAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 72 bp ACCCGGCTGCAGGACTCTGGATCGGTTACATCTATGTaGTTGTTGCAGGCACATGGTTGGCAAGGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: TRLQDSGSVTSM*LLQAHGWQGAP
Trigger: AGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS TCA 72 bp TTGGGGAATAAGGCCAAGAGAGTCCACCAGGACATGTaGATGAGCGTGGGACTCTCCTTGCAAAGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: LGNKAKRVHQDM*MSVGLSLQRLR
Trigger: TCTCAGCCTTTGCAAGGAGAGTCCCACGCTCATTCACATGTCCTGGTGGACTCTCTTGGCCTTATTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp CTGATGATCAGCCTTTCACAGGCACCCGGGAGCACTTaGGGTCCCATTGCTGAGGCAATTTCAACACAGTTG +
Preference number: 6 (lower is better)
Translates to: LMISLSQAPGST*GPIAEAISTQL
Trigger: CAACTGTGTTGAAATTGCCTCAGCAATGGGACCTCAAGTGCTCCCGGGTGCCTGTGAAAGGCTGATCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp GTGGCTACTTTGAGAGGTCCTAGGGTCACAGTCACATaGCTGACATCCTCTGCCAGGGACCAGATTCCAGTA +
Preference number: 6 (lower is better)
Translates to: VATLRGPRVTVT*LTSSARDQIPV
Trigger: TACTGGAATCTGGTCCCTGGCAGAGGATGTCAGTCATGTGACTGTGACCCTAGGACCTCTCAAAGTAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000471677.5
ENST00000475469.1
CDS GCA 72 bp CAGCTGGCCTCCAAGGAGCATCCTGGAAGAAGTCCTTaGATCTCTCACAGTTCGGACCATCTGTATTGTGCT +
Preference number: 6 (lower is better)
Translates to: QLASKEHPGRSP*ISHSSDHLYCA
Trigger: AGCACAATACAGATGGTCCGAACTGTGAGAGATGCAAGGACTTCTTCCAGGATGCTCCTTGGAGGCCAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp TCTCCGAGCCCAAAGGCGCCAGTCCTTGGAGTGTTGTaGCTTCCTCTGCCTCGTAGAGATAGAAATTCAAAG +
Preference number: 6 (lower is better)
Translates to: SPSPKAPVLGVL*LPLPRRDRNSK
Trigger: CTTTGAATTTCTATCTCTACGAGGCAGAGGAAGCCACAACACTCCAAGGACTGGCGCCTTTGGGCTCGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 72 bp GCCTTTCACAGGCACCCGGGAGCACTTGAGGTCCCATaGCTGAGGCAATTTCAACACAGTTGTGAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: AFHRHPGALEVP*LRQFQHSCEAD
Trigger: ATCAGCTTCACAACTGTGTTGAAATTGCCTCAGCAATGGGACCTCAAGTGCTCCCGGGTGCCTGTGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CAA 72 bp CGGCTGCAGGACTCTGGATCGGTTACATCTATGTTGTaGTTGCAGGCACATGGTTGGCAAGGTGCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: RLQDSGSVTSML*LQAHGWQGAPE
Trigger: TTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CAA 72 bp CTGATCCATAGTGACCTGGTTTGCAGAGCTGGCAGTTaGCGCCCTGAGTGTTGTGCAAACATCGAAGGCACT +
Preference number: 6 (lower is better)
Translates to: LIHSDLVCRAGS*RPECCANIEGT
Trigger: AGTGCCTTCGATGTTTGCACAACACTCAGGGCGCAAACTGCCAGCTCTGCAAACCAGGTCACTATGGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000471677.5
ENST00000475469.1
CDS CAA 72 bp GCAGGGAAAGTCCATCCTCCAGCCCTGATCGCTGCTTaGCTAACTCCAGCTCACTCTTCATTTCCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: AGKVHPPALIAA*LTPAHSSFPWF
Trigger: AAACCAGGGAAATGAAGAGTGAGCTGGAGTTAGCAAAGCAGCGATCAGGGCTGGAGGATGGACTTTCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CAA 90 bp GTGTTGGGCAGATTCAGCCTGAACTTTCGCATTGACAGCGTGGTCTaGATGCCTTTGCAACTTGGTCTGCAGCAGGGAAAGTCCATCCTC +
Preference number: 6 (lower is better)
Translates to: VLGRFSLNFRIDSVV*MPLQLGLQQGKSIL
Trigger: GAGGATGGACTTTCCCTGCTGCAGACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAATGCGAAAGTTCAGGCTGAATCTGCCCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CAA 90 bp CCTGTTACCCGGCTGCAGGACTCTGGATCGGTTACATCTATGTTGTaGTTGCAGGCACATGGTTGGCAAGGTGCTCCTGAAATTCTTGGA +
Preference number: 6 (lower is better)
Translates to: PVTRLQDSGSVTSML*LQAHGWQGAPEILG
Trigger: TCCAAGAATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CAA 90 bp TCCCCTGTTACCCGGCTGCAGGACTCTGGATCGGTTACATCTATGTaGTTGTTGCAGGCACATGGTTGGCAAGGTGCTCCTGAAATTCTT +
Preference number: 6 (lower is better)
Translates to: SPVTRLQDSGSVTSM*LLQAHGWQGAPEIL
Trigger: AAGAATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS TCA 72 bp TTCACAGGCACCCGGGAGCACTTGAGGTCCCATTGCTaGGGCAATTTCAACACAGTTGTGAAGCTGATACTC +
Preference number: 6 (lower is better)
Translates to: FTGTREHLRSHC*GNFNTVVKLIL
Trigger: GAGTATCAGCTTCACAACTGTGTTGAAATTGCCTCAGCAATGGGACCTCAAGTGCTCCCGGGTGCCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp GCACTGTCCTGTTACTTGGTCACATACAGTGTCCTTTaGTCCTTGAGGATGGCAGTGACATGGGTGACAGCC +
Preference number: 6 (lower is better)
Translates to: ALSCYLVTYSVL*SLRMAVTWVTA
Trigger: GGCTGTCACCCATGTCACTGCCATCCTCAAGGATCAAAGGACACTGTATGTGACCAAGTAACAGGACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp CCTGGTGTTGGGCAGATTCAGCCTGAACTTTCGCATTaGCAGCGTGGTCTTGATGCCTTTGCAACTTGGTCT +
Preference number: 6 (lower is better)
Translates to: PGVGQIQPELSH*QRGLDAFATWS
Trigger: AGACCAAGTTGCAAAGGCATCAAGACCACGCTGTCAATGCGAAAGTTCAGGCTGAATCTGCCCAACACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS GCA 72 bp TGTGCAAACATCGAAGGCACTCCCCTGTTACCCGGCTaGAGGACTCTGGATCGGTTACATCTATGTTGTTGT +
Preference number: 6 (lower is better)
Translates to: CANIEGTPLLPG*RTLDRLHLCCC
Trigger: ACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAACAGGGGAGTGCCTTCGATGTTTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CCA 72 bp TTAGTCCGTAGTGGTTGGGTTTGCACTGGTCGCATTTaGCTCCTTCCACGTTCTCTTTACAAAGGCACTGGC +
Preference number: 6 (lower is better)
Translates to: LVRSGWVCTGRI*LLPRSLYKGTG
Trigger: GCCAGTGCCTTTGTAAAGAGAACGTGGAAGGAGCCAAATGCGACCAGTGCAAACCCAACCACTACGGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp CAGTGTGCTCCGGTGACATATGACAGGCACAAGCATTaGCCTGTATCCACATCACAGGTCAAGAATGGCAGA +
Preference number: 6 (lower is better)
Translates to: QCAPVTYDRHKH*PVSTSQVKNGR
Trigger: TCTGCCATTCTTGACCTGTGATGTGGATACAGGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCACACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 72 bp GGCACTGTCCTGTTACTTGGTCACATACAGTGTCCTTaGATCCTTGAGGATGGCAGTGACATGGGTGACAGC +
Preference number: 6 (lower is better)
Translates to: GTVLLLGHIQCP*ILEDGSDMGDS
Trigger: GCTGTCACCCATGTCACTGCCATCCTCAAGGATCAAAGGACACTGTATGTGACCAAGTAACAGGACAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CAA 90 bp AGCTCCACAGATTCTGATAACAGGAATGGGCAAAATACTGATTGCTaGAGGGATCATCTGGACACAGGCAAGGACGACAGGGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: SSTDSDNRNGQNTDC*RDHLDTGKDDRAVL
Trigger: CAGGACAGCCCTGTCGTCCTTGCCTGTGTCCAGATGATCCCTCAAGCAATCAGTATTTTGCCCATTCCTGTTATCAGAATCTGTGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp AACAGTGCATTCTTCGCAGTGTGCTCCGGTGACATATaGCAGGCACAAGCATTGGCCTGTATCCACATCACA +
Preference number: 6 (lower is better)
Translates to: NSAFFAVCSGDI*QAQALACIHIT
Trigger: TGTGATGTGGATACAGGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCACACTGCGAAGAATGCACTGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 72 bp AGTATCCAACAGTGCATTCTTCGCAGTGTGCTCCGGTaGCATATGACAGGCACAAGCATTGGCCTGTATCCA +
Preference number: 6 (lower is better)
Translates to: SIQQCILRSVLR*HMTGTSIGLYP
Trigger: TGGATACAGGCCAATGCTTGTGCCTGTCATATGTCACCGGAGCACACTGCGAAGAATGCACTGTTGGATACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 72 bp CCAATATCACAGTCACAGGGAGAACACCCATGGAGATaGTTTCCCAGGCCCCAGTATCCAACAGTGCATTCT +
Preference number: 6 (lower is better)
Translates to: PISQSQGEHPWR*FPRPQYPTVHS
Trigger: AGAATGCACTGTTGGATACTGGGGCCTGGGAAATCATCTCCATGGGTGTTCTCCCTGTGACTGTGATATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 72 bp AGCATGATTCTCGTAGCCGCTGGTAAGGCAAAAGACTaGGGCTTTGACTGTAGAGTCTTGGGTATGCAGTGC +
Preference number: 6 (lower is better)
Translates to: SMILVAAGKAKD*GFDCRVLGMQC
Trigger: GCACTGCATACCCAAGACTCTACAGTCAAAGCCTCAGTCTTTTGCCTTACCAGCGGCTACGAGAATCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp ACCGCCACAGGGCAAGGGCACACATGGCACATTTCCTaGATCTCCGCACACCTTTTCATTCAATATTTGGAT +
Preference number: 6 (lower is better)
Translates to: TATGQGHTWHIS*ISAHLFIQYLD
Trigger: ATCCAAATATTGAATGAAAAGGTGTGCGGAGATCCAGGAAATGTGCCATGTGTGCCCTTGCCCTGTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 72 bp CAGCCTTGTGGTTCCGCCCCTTCTCAAGTGGCAGCATaGGGAAGACAGCCAAATCAATGTCTCATTTTTCTA +
Preference number: 6 (lower is better)
Translates to: QPCGSAPSQVAA*GRQPNQCLIFL
Trigger: TAGAAAAATGAGACATTGATTTGGCTGTCTTCCCCATGCTGCCACTTGAGAAGGGGCGGAACCACAAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422975.1
CDS CAA 72 bp ATCTTCTGCATAGGGCGACATTCGCTAGCATGGCCATaGCAAAAGCAGCTTCCCCGAACAATCATCTCGTAC +
Preference number: 6 (lower is better)
Translates to: IFCIGRHSLAWP*QKQLPRTIISY
Trigger: GTACGAGATGATTGTTCGGGGAAGCTGCTTTTGCAATGGCCATGCTAGCGAATGTCGCCCTATGCAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 90 bp GTTACCCGGCTGCAGGACTCTGGATCGGTTACATCTATGTTGTTGTaGCAGGCACATGGTTGGCAAGGTGCTCCTGAAATTCTTGGATTT +
Preference number: 6 (lower is better)
Translates to: VTRLQDSGSVTSMLL*QAHGWQGAPEILGF
Trigger: AAATCCAAGAATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAGCCGGGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS GCA 72 bp TGCAGGACTCTGGATCGGTTACATCTATGTTGTTGTTaGAGGCACATGGTTGGCAAGGTGCTCCTGAAATTC +
Preference number: 6 (lower is better)
Translates to: CRTLDRLHLCCC*RHMVGKVLLKF
Trigger: GAATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS GCA 72 bp TTATCTTCCATGTTAGCAGCCAGTCTCATTAACCCTTaGACCGCTTTGGAGAGGGAAGAAATGGTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: LSSMLAASLINP*TALEREEMVWS
Trigger: GGACCACACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGTTAATGAGACTGGCTGCTAACATGGAAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CAA 72 bp CTGCAGGACTCTGGATCGGTTACATCTATGTTGTTGTaGCAGGCACATGGTTGGCAAGGTGCTCCTGAAATT +
Preference number: 6 (lower is better)
Translates to: LQDSGSVTSMLL*QAHGWQGAPEI
Trigger: AATTTCAGGAGCACCTTGCCAACCATGTGCCTGCAACAACAACATAGATGTAACCGATCCAGAGTCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CAA 72 bp ATCCTTTCTATTTCAGACACGTTCCCTCTGAGGTCTTaGAAGTCTGCCTCACAGACAGGCAGGGTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: ILSISDTFPLRS*KSASQTGRVSL
Trigger: AAGAGAGACCCTGCCTGTCTGTGAGGCAGACTTCAAAGACCTCAGAGGGAACGTGTCTGAAATAGAAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CAA 90 bp TCATTTTGCCTCCTTCCAAGCAAAGCATCCCCAAGGGTGTGGAGCTaGGTAAAGTTTATCCTCAGGTTTGTCAATGTCACAAGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: SFCLLPSKASPRVWS*VKFILRFVNVTRSW
Trigger: CCAAGACCTTGTGACATTGACAAACCTGAGGATAAACTTTACCAAGCTCCACACCCTTGGGGATGCTTTGCTTGGAAGGAGGCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS TCA 72 bp ATCATCTGGACACAGGCAAGGACGACAGGGCTGTCCTaGAGAAGGATTTCCATAGTAACCATCAATACACCT +
Preference number: 6 (lower is better)
Translates to: IIWTQARTTGLS*RRISIVTINTP
Trigger: AGGTGTATTGATGGTTACTATGGAAATCCTTCTTCAGGACAGCCCTGTCGTCCTTGCCTGTGTCCAGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS TCA 72 bp ATTCTGATAACAGGAATGGGCAAAATACTGATTGCTTaGGGGATCATCTGGACACAGGCAAGGACGACAGGG +
Preference number: 6 (lower is better)
Translates to: ILITGMGKILIA*GIIWTQARTTG
Trigger: CCCTGTCGTCCTTGCCTGTGTCCAGATGATCCCTCAAGCAATCAGTATTTTGCCCATTCCTGTTATCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 72 bp CAGGTGGATCACCATAATAATTTTCCTGGCACTCACTaGAACGTTTCCCGCCGTAACCTAATTTACACGGAC +
Preference number: 6 (lower is better)
Translates to: QVDHHNNFPGTH*NVSRRNLIYTD
Trigger: GTCCGTGTAAATTAGGTTACGGCGGGAAACGTTGCAGTGAGTGCCAGGAAAATTATTATGGTGATCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS GCA 72 bp TATTTCAGACACGTTCCCTCTGAGGTCTTTGAAGTCTaGCTCACAGACAGGCAGGGTCTCTCTTTTATCTTC +
Preference number: 6 (lower is better)
Translates to: YFRHVPSEVFEV*LTDRQGLSFIF
Trigger: GAAGATAAAAGAGAGACCCTGCCTGTCTGTGAGGCAGACTTCAAAGACCTCAGAGGGAACGTGTCTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 72 bp TGCCCTGTTACAATCACATGGAATGCATCGCCCAGGTaGATCACCATAATAATTTTCCTGGCACTCACTGCA +
Preference number: 6 (lower is better)
Translates to: CPVTITWNASPR*ITIIIFLALTA
Trigger: TGCAGTGAGTGCCAGGAAAATTATTATGGTGATCCACCTGGGCGATGCATTCCATGTGATTGTAACAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CCA 72 bp TCATTAACCCTTGCACCGCTTTGGAGAGGGAAGAAATaGTGTGGTCCCACTGATCAAAGCACAAGTGACATT +
Preference number: 6 (lower is better)
Translates to: SLTLAPLWRGKK*CGPTDQSTSDI
Trigger: AATGTCACTTGTGCTTTGATCAGTGGGACCACACCATTTCTTCCCTCTCCAAAGCGGTGCAAGGGTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS CAA 72 bp CTCCTTCCAAGCAAAGCATCCCCAAGGGTGTGGAGCTaGGTAAAGTTTATCCTCAGGTTTGTCAATGTCACA +
Preference number: 6 (lower is better)
Translates to: LLPSKASPRVWS*VKFILRFVNVT
Trigger: TGTGACATTGACAAACCTGAGGATAAACTTTACCAAGCTCCACACCCTTGGGGATGCTTTGCTTGGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 72 bp GATTCTGATAACAGGAATGGGCAAAATACTGATTGCTaGAGGGATCATCTGGACACAGGCAAGGACGACAGG +
Preference number: 6 (lower is better)
Translates to: DSDNRNGQNTDC*RDHLDTGKDDR
Trigger: CCTGTCGTCCTTGCCTGTGTCCAGATGATCCCTCAAGCAATCAGTATTTTGCCCATTCCTGTTATCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 72 bp ACAGATTCTGATAACAGGAATGGGCAAAATACTGATTaGTTGAGGGATCATCTGGACACAGGCAAGGACGAC +
Preference number: 6 (lower is better)
Translates to: TDSDNRNGQNTD*LRDHLDTGKDD
Trigger: GTCGTCCTTGCCTGTGTCCAGATGATCCCTCAAGCAATCAGTATTTTGCCCATTCCTGTTATCAGAATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS CCA 72 bp TTTTGCCTCCTTCCAAGCAAAGCATCCCCAAGGGTGTaGAGCTTGGTAAAGTTTATCCTCAGGTTTGTCAAT +
Preference number: 6 (lower is better)
Translates to: FCLLPSKASPRV*SLVKFILRFVN
Trigger: ATTGACAAACCTGAGGATAAACTTTACCAAGCTCCACACCCTTGGGGATGCTTTGCTTGGAAGGAGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 90 bp AATCATCTCGTACAGAGCATAGTAGTATTTATCAAGGGAATCATTTaGCCTCCTTCCAAGCAAAGCATCCCCAAGGGTGTGGAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: NHLVQSIVVFIKGII*PPSKQSIPKGVELG
Trigger: ACCAAGCTCCACACCCTTGGGGATGCTTTGCTTGGAAGGAGGCAAAATGATTCCCTTGATAAATACTACTATGCTCTGTACGAGATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 90 bp TGTTTCAAAATCCTTTCTATTTCAGACACGTTCCCTCTGAGGTCTTaGAAGTCTGCCTCACAGACAGGCAGGGTCTCTCTTTTATCTTCC +
Preference number: 6 (lower is better)
Translates to: CFKILSISDTFPLRS*KSASQTGRVSLLSS
Trigger: GGAAGATAAAAGAGAGACCCTGCCTGTCTGTGAGGCAGACTTCAAAGACCTCAGAGGGAACGTGTCTGAAATAGAAAGGATTTTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
CDS TCA 72 bp AGTTCATCGGTTAGATTTTGGGATGGAATTGGTAGGTaGATGTCAAGCACACCATTCGCAACCTTCTCGATG +
Preference number: 6 (lower is better)
Translates to: SSSVRFWDGIGR*MSSTPFATFSM
Trigger: CATCGAGAAGGTTGCGAATGGTGTGCTTGACATTCACCTACCAATTCCATCCCAAAATCTAACCGATGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000475572.1
CDS CAA 72 bp CTTTCACAGTTTCTGCCAGTTGTAAAGCCTCCACAATaGAAGCATGACCCTGTCTCAGGATCACAAAGTTCA +
Preference number: 6 (lower is better)
Translates to: LSQFLPVVKPPQ*KHDPVSGSQSS
Trigger: TGAACTTTGTGATCCTGAGACAGGGTCATGCTTCAATTGTGGAGGCTTTACAACTGGCAGAAACTGTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000475469.1
CDS GCA 72 bp CTCCACACTGAGTACCCGTATAACCTTGAAGACAATTaGAGATTACATCTGAGCTCCACAGATTCTGATAAC +
Preference number: 6 (lower is better)
Translates to: LHTEYPYNLEDN*RLHLSSTDSDN
Trigger: GTTATCAGAATCTGTGGAGCTCAGATGTAATCTGCAATTGTCTTCAAGGTTATACGGGTACTCAGTGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000471677.5
ENST00000475469.1
CDS CCA 72 bp CTTACAATGACATTCTCAATGGTGTGGCTGTTGGGTTaGTCATACGGATCATATGGAAATCTAGAGTCACAG +
Preference number: 6 (lower is better)
Translates to: LTMTFSMVWLLG*SYGSYGNLESQ
Trigger: CTGTGACTCTAGATTTCCATATGATCCGTATGACCAACCCAACAGCCACACCATTGAGAATGTCATTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CCA 72 bp AATGGTGTGGCTGTTGGGTTGGTCATACGGATCATATaGAAATCTAGAGTCACAGATGAAGCATTTTTGTTC +
Preference number: 6 (lower is better)
Translates to: NGVAVGLVIRII*KSRVTDEAFLF
Trigger: GAACAAAAATGCTTCATCTGTGACTCTAGATTTCCATATGATCCGTATGACCAACCCAACAGCCACACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 72 bp ACTTACAATGACATTCTCAATGGTGTGGCTGTTGGGTaGGTCATACGGATCATATGGAAATCTAGAGTCACA +
Preference number: 6 (lower is better)
Translates to: TYNDILNGVAVG*VIRIIWKSRVT
Trigger: TGTGACTCTAGATTTCCATATGATCCGTATGACCAACCCAACAGCCACACCATTGAGAATGTCATTGTAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000418464.1
ENST00000475469.1
CDS CAA 72 bp TTTCCCAGTTTTTCCCTCAGCTGTAAGGCATTGTTTTaGGAGACTTCTGCCTGTTCACTTATACTTTCGATC +
Preference number: 6 (lower is better)
Translates to: FPSFSLSCKALF*ETSACSLILSI
Trigger: GATCGAAAGTATAAGTGAACAGGCAGAAGTCTCCAAAAACAATGCCTTACAGCTGAGGGAAAAACTGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1
ENST00000475572.1
CDS CAA 90 bp TTTCTTATATTTCCCAGTTTTTCCCTCAGCTGTAAGGCATTGTTTTaGGAGACTTCTGCCTGTTCACTTATACTTTCGATCTGCCATGGT +
Preference number: 6 (lower is better)
Translates to: FLIFPSFSLSCKALF*ETSACSLILSICHG
Trigger: ACCATGGCAGATCGAAAGTATAAGTGAACAGGCAGAAGTCTCCAAAAACAATGCCTTACAGCTGAGGGAAAAACTGGGAAATATAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475572.1
CDS CAA 90 bp CTTTGGTTTCTTATATTTCCCAGTTTTTCCCTCAGCTGTAAGGCATaGTTTTTGGAGACTTCTGCCTGTTCACTTATACTTTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: LWFLIFPSFSLSCKA*FLETSACSLILSIC
Trigger: GCAGATCGAAAGTATAAGTGAACAGGCAGAAGTCTCCAAAAACAATGCCTTACAGCTGAGGGAAAAACTGGGAAATATAAGAAACCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475572.1
CDS TCA 72 bp AAGGGTCAGTTGAAATTGCATTCTTTTGTCAGGAGATaGTTAAATTCAATTCAGGATCTGGGAGTCTTTGTG +
Preference number: 6 (lower is better)
Translates to: KGQLKLHSFVRR*LNSIQDLGVFV
Trigger: CACAAAGACTCCCAGATCCTGAATTGAATTTAATCATCTCCTGACAAAAGAATGCAATTTCAACTGACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205386.8
ENST00000418464.1
CDS CAA 90 bp CAATTTCTTCCTGAAGGTCTTCAAGTAAGAGGTCTGCTTCATTCTTaGCTCTTTCTATTGTATCTTTCAGATCTTGAAATTCATACACTG +
Preference number: 6 (lower is better)
Translates to: QFLPEGLQVRGLLHS*LFLLYLSDLEIHTL
Trigger: CAGTGTATGAATTTCAAGATCTGAAAGATACAATAGAAAGAGCAAAGAATGAAGCAGACCTCTTACTTGAAGACCTTCAGGAAGAAATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205386.8
ENST00000388781.8
ENST00000422975.1