RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000112769

Ensembl transcript IDs: ENST00000230538.12, ENST00000243219.7, ENST00000368638.5, ENST00000368640.8, ENST00000389463.9, ENST00000423735.2, ENST00000424408.6, ENST00000431543.6, ENST00000453937.2, ENST00000455073.1, ENST00000518842.1, ENST00000519245.1, ENST00000519932.5, ENST00000521187.1, ENST00000521398.5, ENST00000521690.1, ENST00000521693.1, ENST00000521732.5, ENST00000522006.5, ENST00000523765.1, ENST00000524032.5, ENST00000604740.5, ENST00000651529.1, ENST00000651860.1

Found 1412 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGCTGGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTaGTTTACTGAAGCTCACTGGGTGTCCATCAATCACAAAGTGGCG +
Preference number: 1 (lower is better)
Translates to: GCWTGVDAYGAADQG*FTEAHWVSINHKVA
Trigger: CGCCACTTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR GCA 90 bp TGTGACCAGTTGGTTAGATTGTTGGCCATGGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTA +
Preference number: 1 (lower is better)
Translates to: CDQLVRLLAMGAVAC*TSIVVLLASSVISL
Trigger: TAGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR GCA 90 bp TTCTGTGACCAGTTGGTTAGATTGTTGGCCATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGT +
Preference number: 1 (lower is better)
Translates to: FCDQLVRLLAMGAVA*CTSIVVLLASSVIS
Trigger: ACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 90 bp GATGCTTACGGCGCCGCTGACCAGGGCTGCTTTACTGAAGCTCACTaGGTGTCCATCAATCACAAAGTGGCGTATGCAGCCTGTGAAGGG +
Preference number: 1 (lower is better)
Translates to: DAYGAADQGCFTEAH*VSINHKVAYAACEG
Trigger: CCCTTCACAGGCTGCATACGCCACTTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGCGCCGTAAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR GCA 90 bp AGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAACCGTACGAAGCTGATCCAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: SNELSDPLDAGRNVA*RSLLLNRTKLIQEL
Trigger: CAGCTCCTGGATCAGCTTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR GCA 90 bp CTAAAGAACTTTGTATTTGGGCAGCTGTGCTCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTGC +
Preference number: 1 (lower is better)
Translates to: LKNFVFGQLCSVMSG*WTGVDAYGAADQGC
Trigger: GCAGCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CCA 90 bp AGGGCTGCTTTACTGAAGCTCACTGGGTGTCCATCAATCACAAAGTaGCGTATGCAGCCTGTGAAGGGTTTGCTGGGGGCCAAGCGTGGT +
Preference number: 1 (lower is better)
Translates to: RAALLKLTGCPSITK*RMQPVKGLLGAKRG
Trigger: ACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCCACTTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CCA 90 bp AAGAACTTTGTATTTGGGCAGCTGTGCTCTGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: KNFVFGQLCSVMSGC*TGVDAYGAADQGCF
Trigger: AAAGCAGCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGACAGAGCACAGCTGCCCAAATACAAAGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR TCA 90 bp GTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCATACTGGTTCTCGAGTGCACTTCCA +
Preference number: 1 (lower is better)
Translates to: VPAASQGVSCTGSET*RPLSHPYWFSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR TCA 90 bp TCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAG +
Preference number: 1 (lower is better)
Translates to: SWRLGSCWQHFWSEQ*ALGSSGCWQKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 90 bp CAAAATGTTGAAGATTCTGTGACCAGTTGGTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTT +
Preference number: 1 (lower is better)
Translates to: QNVEDSVTSWLDCWP*GQWPAAPPSSSCWL
Trigger: AAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTCAACATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 90 bp AAGAGTCAAAATGTTGAAGATTCTGTGACCAGTTGGTTAGATTGTTaGCCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGT +
Preference number: 1 (lower is better)
Translates to: KSQNVEDSVTSWLDC*PWGQWPAAPPSSSC
Trigger: ACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTCAACATTTTGACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR GCA 90 bp CTCAGAGACGTGAAGGCCTTTAAGTCATCCATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGGCCATCAAACATCATGGAGACTTGG +
Preference number: 1 (lower is better)
Translates to: LRDVKAFKSSILVLE*TSTADWPSNIMETW
Trigger: CCAAGTCTCCATGATGTTTGATGGCCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTATGGATGACTTAAAGGCCTTCACGTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 90 bp TGTTGTAAGCAGAAGAGTCAAAATGTTGAAGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGGGGGCAGTGGCCTGCTGCACCTCCA +
Preference number: 1 (lower is better)
Translates to: CCKQKSQNVEDSVTS*LDCWPWGQWPAAPP
Trigger: TGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTCAACATTTTGACTCTTCTGCTTACAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 90 bp TGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTTaGATTCAGGGGTCCAACCACATGGTTCACTTCAGAGTCCACATC +
Preference number: 1 (lower is better)
Translates to: WNTSNKHRLPVINWF*IQGSNHMVHFRVHI
Trigger: GATGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR TCA 90 bp AAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: KYPVPDDSFKSCSTR*KLPPEGRVTVPPGW
Trigger: CCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR TCA 90 bp GTCAGTAGAGATTCTGGAACACCTCCAACAAACACAGGCTCCCTGTaGTCAATTGGTTTTGGATTCAGGGGTCCAACCACATGGTTCACT +
Preference number: 1 (lower is better)
Translates to: VSRDSGTPPTNTGSL*SIGFGFRGPTTWFT
Trigger: AGTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAGAATCTCTACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR GCA 90 bp TGTGTTTCTTTCAGTGCTCTAAAGAACTTTGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGCTGGACAGGAGTTGATGCTTACGGC +
Preference number: 1 (lower is better)
Translates to: CVSFSALKNFVFGQL*SVMSGCWTGVDAYG
Trigger: GCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTTAGAGCACTGAAAGAAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CCA 90 bp AGATTCTGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAATTaGTTTTGGATTCAGGGGTCCAACCACATGGTTCACTTCAGAGTC +
Preference number: 1 (lower is better)
Translates to: RFWNTSNKHRLPVIN*FWIQGSNHMVHFRV
Trigger: GACTCTGAAGTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR GCA 90 bp AGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCTTTCAGTaGTCTAAAGAACTTTGTATTTGGGCAGCTGTGCTCTGTCATGTC +
Preference number: 1 (lower is better)
Translates to: RKSYCSSWLALCFFQ*SKELCIWAAVLCHV
Trigger: GACATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTTAGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR TCA 90 bp TTCAGGGGTCCAACCACATGGTTCACTTCAGAGTCCACATCCAACTaGACCACATTAGAATCTCTAATAACTGTAATTCTGTGCCATCTG +
Preference number: 1 (lower is better)
Translates to: FRGPTTWFTSESTSN*TTLESLITVILCHL
Trigger: CAGATGGCACAGAATTACAGTTATTAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CAA 90 bp TTGGCCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGTCTAGACTGCCCCAGGCGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LAMGAVACCTSIVVL*ASSVISLDCPRRCW
Trigger: CCAGCAGCGCCTGGGGCAGTCTAGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR GCA 90 bp TCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGGACTGCCCCAGGCGCTaGTGGGCATCCCCTAATCCT +
Preference number: 2 (lower is better)
Translates to: SVSSGRFTGGFMYRLRDVDCPRR*WASPNP
Trigger: AGGATTAGGGGATGCCCAGCAGCGCCTGGGGCAGTC...CACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR GCA 90 bp GATCTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: DLQSRSVPAASQGVSCTGVISLD*PRRCWA
Trigger: TGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCAC...GCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CCA 90 bp CTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTGCCCCAGGCGCTGCTaGGCATCCCCTAATCCTTCC +
Preference number: 2 (lower is better)
Translates to: LSNELSDPLDAGRNVACRCPRRC*ASPNPS
Trigger: GGAAGGATTAGGGGATGCCCAGCAGCGCCTGGGGCA...CCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR TCA 90 bp TCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGTTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: SVSSGRFTGGFMYRLRDVFWSEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAA...CACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CCA 90 bp CCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCAACCGTACGTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: PLDAGRNVACRSLLLNRTLDCWP*GQWPAA
Trigger: TGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAA...CGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR GCA 90 bp CTGACTGGCCATCAAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTC +
Preference number: 2 (lower is better)
Translates to: LTGHQTSWRLGSCWQHFWMGAVA*CTSIVV
Trigger: GACGACGATGGAGGTGCAGCAGGCCACTGCCCCCAT...CCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTTGATGGCCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CAA 90 bp GGGTGTCCATCAATCACAAAGTGGCGTATGCAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGTGTCAGTAGAGATTCTGGAACACCT +
Preference number: 2 (lower is better)
Translates to: GCPSITKWRMQPVKG*LGAKRGVSRDSGTP
Trigger: AGGTGTTCCAGAATCTCTACTGACACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCCACTTTGTGATTGATGGACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR CCA 90 bp ACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATGTGGGCTCTCTGAATaGACACTGTCTTCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: TEQGSCSHRAHCAAAMWSCGLSE*TLSSES
Trigger: TGACTCAGAAGACAGTGTCCATTCAGAGAGCCCACA...TGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
3UTR-3UTR CCA 90 bp AGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGAAGGCCTTAAGTCATCCATACTaGTTCTCGAGTGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: SSGRFTGGFMYRLRDVKALSHPY*FSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAA...GGCCTTCACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR TCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGA +
Preference number: 2 (lower is better)
Translates to: LDESFHPKEELLFLLAGFSCSTR*KLPPEG
Trigger: TCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGA...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR GCA 90 bp ATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCCCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: MSSRILWMLAETLLAGRFPSRVH*SVVSRR
Trigger: TCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGG...GAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR GCA 90 bp TTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGAAGGCCTTTAAGTCATCCTGCTGGCAGAAACGTTaGTTGCAGGTCGCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: FTGGFMYRLRDVKAFKSSCWQKR*LQVASA
Trigger: AGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA...GGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CCA 90 bp CTGACTGGCCATCAAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGAGCTCTCGGATCCTCTaGATGCTGGCAGAAACGTTG +
Preference number: 2 (lower is better)
Translates to: LTGHQTSWRLGSCWQHFWSSRIL*MLAETL
Trigger: CAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCT...CCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTTGATGGCCAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CCA 90 bp TTTAAGTCATCCATACTGGTTCTCGAGTGCACTTCCACAGCTGACTGGCCATCAAGTTGGTTAGATTGTTaGCCATGGGGGCAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: FKSSILVLECTSTADWPSSWLDC*PWGQWP
Trigger: AGGCCACTGCCCCCATGGCCAACAATCTAACCAACT...TGATGGCCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTATGGATGACTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CAA 90 bp CTGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTaGGATTCAGGGGTCCAACCACATGGTTCACTTCAGAGTCCACAT +
Preference number: 2 (lower is better)
Translates to: LEHLQQTQAPCDQLV*DSGVQPHGSLQSPH
Trigger: ATGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR TCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAGGCGTATGCAGCCTGTaGAGGGTTTGCTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPGVCSL*RVCWGP
Trigger: TGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCC...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR GCA 90 bp AAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGTCTGAGCAATGAGCTCGGATCCTCTGGATaGTGGCAGAAACGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: KHHGDLDLAGNTSGLSNELGSSG*WQKRCL
Trigger: CAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAG...CTCATTGCTCAGACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CCA 90 bp TTCATGTACAGGCTCAGAGACGTGAAGGCCTTTAAGTCATCCATACTGGTTCTCGGATCCTCTGGATGCTaGCAGAAACGTTGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: FMYRLRDVKAFKSSILVLGSSGC*QKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCC...GAGAACCAGTATGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGTACATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CCA 90 bp CTGACTGGCCATCAAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGG +
Preference number: 2 (lower is better)
Translates to: LTGHQTSWRLGSCWQHFWDSVTS*LDCWPW
Trigger: CCATGGCCAACAATCTAACCAACTGGTCACAGAATC...CCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTTGATGGCCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: DESFHPKEELLFLLAGFVKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CCA 90 bp GAGGAAGACTTTCTTCTAGGACTCGGAGACCATCAATTACCAGTCGGCCACTGCAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: EEDFLLGLGDHQLPVGHCKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...GCAGTGGCCGACTGGTAATTGATGGTCTCCGAGTCCTAGAAGAAAGTCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CAA 90 bp AAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCTAAAGAACTTTGTATTTGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: KASTRRKSYCSSWLA*CFFQCSKELCIWAA
Trigger: AGCTGCCCAAATACAAAGTTCTTTAGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR TCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCA +
Preference number: 2 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPLGTPH*HCGRGP
Trigger: TGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTTCAATTGTTGTCCATTaGAGACACTTTGGATTCAAG +
Preference number: 2 (lower is better)
Translates to: LDESFHPKEELLFLLAGFSIVVH*RHFGFK
Trigger: CTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR TCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGCCTGCAAGAACTGACTaGAACACTGGTCATGACAGT +
Preference number: 2 (lower is better)
Translates to: FCILYILWLNGLGQLYQQPARTD*NTGHDS
Trigger: ACTGTCATGACCAGTGTTTCAGTCAGTTCTTGCAGG...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
3UTR CAA 90 bp TTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTGTaGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATG +
Preference number: 2 (lower is better)
Translates to: LRVLSIQVSLPLLQL*SIADTLDSRLRIQM
Trigger: CATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR CAA 90 bp GAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATaGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAA +
Preference number: 2 (lower is better)
Translates to: ELRVLSIQVSLPLLQ*LSIADTLDSRLRIQ
Trigger: TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CCA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: TVISPVGIACALNTSKFAKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
3UTR-3UTR TCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATCTGCTTGGGTGTAACTaGGGTGGAAAAATCTCTGAT +
Preference number: 2 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDLLGCN*GGKISD
Trigger: ATCAGAGATTTTTCCACCTCAGTTACACCCAAGCAG...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CAA 90 bp CAAGTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTaGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCG +
Preference number: 2 (lower is better)
Translates to: QVSLPLLQLLSIADT*DSRLRIQMRNKKYP
Trigger: CGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR GCA 72 bp GTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCATCCCCTAATCCTTCC +
Preference number: 3 (lower is better)
Translates to: VVLLASSVISLD*PRRCWASPNPS
Trigger: GGAAGGATTAGGGGATGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCACCGAGGAAGCCAACAGGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CAA 90 bp GTCATGTCAGGCTGCTGGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTTTAGGTACTCCCCATaGACACTGTGGCCGTGGACC +
Preference number: 3 (lower is better)
Translates to: VMSGCWTGVDAYGAADQGFRYSP*TLWPWT
Trigger: GGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAA...GCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR GCA 72 bp TTGGTTAGATTGTTGGCCATGGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTG +
Preference number: 3 (lower is better)
Translates to: LVRLLAMGAVAC*TSIVVLLASSV
Trigger: CACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR GCA 72 bp CAGTTGGTTAGATTGTTGGCCATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCG +
Preference number: 3 (lower is better)
Translates to: QLVRLLAMGAVA*CTSIVVLLASS
Trigger: CGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 72 bp GTGACCAGTTGGTTAGATTGTTGGCCATGGGGGCAGTaGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTT +
Preference number: 3 (lower is better)
Translates to: VTSWLDCWPWGQ*PAAPPSSSCWL
Trigger: AAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 72 bp GTATTTGGGCAGCTGTGCTCTGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTACGGCGCCGCTGACCAG +
Preference number: 3 (lower is better)
Translates to: VFGQLCSVMSGC*TGVDAYGAADQ
Trigger: CTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGACAGAGCACAGCTGCCCAAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR CAA 90 bp AGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGAAGGCCTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: SSGRFTGGFMYRLRDVKAWQKRC*QVASAQ
Trigger: TTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCA...GGCCTTCACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 72 bp GAAGATTCTGTGACCAGTTGGTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCC +
Preference number: 3 (lower is better)
Translates to: EDSVTSWLDCWP*GQWPAAPPSSS
Trigger: GGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR TCA 72 bp GCAGGTACAGTCAGCAGTCATAGCTCACTGCAGCCTTaGACTCCTGAGCTTAAGCGATCCTCCCGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: AGTVSSHSSLQP*TPELKRSSRLS
Trigger: GCTGAGACGGGAGGATCGCTTAAGCTCAGGAGTTCAAGGCTGCAGTGAGCTATGACTGCTGACTGTACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
3UTR GCA 72 bp CTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAACCGTACGAAGCTGATC +
Preference number: 3 (lower is better)
Translates to: LSDPLDAGRNVA*RSLLLNRTKLI
Trigger: GATCAGCTTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR GCA 72 bp ACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTaGTTTACTGAAGCTCACTGGGTGTCCATCAATCAC +
Preference number: 3 (lower is better)
Translates to: TGVDAYGAADQG*FTEAHWVSINH
Trigger: GTGATTGATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR GCA 72 bp TTTGTATTTGGGCAGCTGTGCTCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCTTACGGCGCCGCTGAC +
Preference number: 3 (lower is better)
Translates to: FVFGQLCSVMSG*WTGVDAYGAAD
Trigger: GTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGACAGAGCACAGCTGCCCAAATACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR CAA 90 bp CTTACGGCGCCGCTGACCAGGGCTGCTTTACTGAAGCTCACTGGGTGTCCATCATGCCACAGGCCATCATaGTATTTCTCCTGGCTTCTA +
Preference number: 3 (lower is better)
Translates to: LTAPLTRAALLKLTGCPSCHRPS*YFSWLL
Trigger: TAGAAGCCAGGAGAAATACAATGATGGCCTGTGGCA...TGATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGCGCCGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CCA 72 bp TTACTGAAGCTCACTGGGTGTCCATCAATCACAAAGTaGCGTATGCAGCCTGTGAAGGGTTTGCTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: LLKLTGCPSITK*RMQPVKGLLGA
Trigger: GGCCCCCAGCAAACCCTTCACAGGCTGCATACGCCACTTTGTGATTGATGGACACCCAGTGAGCTTCAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR CAA 90 bp TTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGAAGGCCTTTAAGTCATCCCAGTTGGTTAGATTGTaGGCCATGGGGGCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: FTGGFMYRLRDVKAFKSSQLVRL*AMGAVA
Trigger: GGCCACTGCCCCCATGGCCAACAATCTAACCAACTG...GGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CAA 90 bp CTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAAAACATCATGGAGACTaGGATCTTGCTGGCAACACT +
Preference number: 3 (lower is better)
Translates to: LQSRSVPAASQGVSCTGSKHHGD*DLAGNT
Trigger: AGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT...TGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGATGGAGGCCCCATaGAGCTGGAGATTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LDESFHPKEELLFLLAGFVMEAP*SWRLLR
Trigger: TCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCAC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR TCA 72 bp CTTGGATCTTGCTGGCAACACTTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGATGCTGGCAGAAACGT +
Preference number: 3 (lower is better)
Translates to: LGSCWQHFWSEQ*ALGSSGCWQKR
Trigger: ACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGCCAGCAAGATCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR TCA 72 bp ATGGAGACTTGGATCTTGCTGGCAACACTTCTGGTCTaGGCAATGAGCTCTCGGATCCTCTGGATGCTGGCA +
Preference number: 3 (lower is better)
Translates to: METWILLATLLV*AMSSRILWMLA
Trigger: TGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CAA 90 bp CCGCTGACCAGGGCTGCTTTACTGAAGCTCACTGGGTGTCCATCAATCACAAAGCCATTGAGCTGGAGATaGCTGAGACAGCCACTAAAA +
Preference number: 3 (lower is better)
Translates to: PLTRAALLKLTGCPSITKPLSWR*LRQPLK
Trigger: TTTTAGTGGCTGTCTCAGCAATCTCCAGCTCAATGG...CTTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR TCA 72 bp GTCCATTTTTCATGTGAACATTTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCAGGGTTCCGGAACTGC +
Preference number: 3 (lower is better)
Translates to: VHFSCEHLGTPH*HCGRGPGFRNC
Trigger: GCAGTTCCGGAACCCTGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAATGTTCACATGAAAAATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CCA 72 bp CACTGTGGCCGTGGACCAGGGTTCCGGAACTGCTTCTaGGACGGACTTCAAATGCAATTTCAAACTTCAATC +
Preference number: 3 (lower is better)
Translates to: HCGRGPGFRNCF*DGLQMQFQTSI
Trigger: GATTGAAGTTTGAAATTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGGTCCACGGCCACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR TCA 72 bp GCTTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCATACTGGTTCTCGAGT +
Preference number: 3 (lower is better)
Translates to: ASQGVSCTGSET*RPLSHPYWFSS
Trigger: ACTCGAGAACCAGTATGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR GCA 72 bp GTGAAGGCCTTTAAGTCATCCATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGGCCATCAAACATCATG +
Preference number: 3 (lower is better)
Translates to: VKAFKSSILVLE*TSTADWPSNIM
Trigger: CATGATGTTTGATGGCCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTATGGATGACTTAAAGGCCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 72 bp CAGAAGAGTCAAAATGTTGAAGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGGGGGCAGTGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: QKSQNVEDSVTS*LDCWPWGQWPA
Trigger: AGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTCAACATTTTGACTCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CCA 72 bp AACACCTCCAACAAACACAGGCTCCCTGTGATCAATTaGTTTTGGATTCAGGGGTCCAACCACATGGTTCAC +
Preference number: 3 (lower is better)
Translates to: NTSNKHRLPVIN*FWIQGSNHMVH
Trigger: GTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: RLSPVQLDESFHPKEELLSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CAA 90 bp TTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGAAGGCCTTTAAGTCATCCAGATTCTGTGACCAGTaGGTTAGATTGTTGGCCATG +
Preference number: 3 (lower is better)
Translates to: FTGGFMYRLRDVKAFKSSRFCDQ*VRLLAM
Trigger: CATGGCCAACAATCTAACCAACTGGTCACAGAATCT...GGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CAA 90 bp TTCATGTACAGGCTCAGAGACGTGAAGGCCTTTAAGTCATCCATACTGGTTCTCATGGAGACTTGGATCTaGCTGGCAACACTTCTGGTC +
Preference number: 3 (lower is better)
Translates to: FMYRLRDVKAFKSSILVLMETWI*LATLLV
Trigger: GACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT...GAGAACCAGTATGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGTACATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR GCA 72 bp TTCAGTGCTCTAAAGAACTTTGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGCTGGACAGGAGTTGAT +
Preference number: 3 (lower is better)
Translates to: FSALKNFVFGQL*SVMSGCWTGVD
Trigger: ATCAACTCCTGTCCAGCAGCCTGACATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTTAGAGCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CCA 72 bp TCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTTaGATTCAGGGGTCCAACCACATGGTTCACTTCAGA +
Preference number: 3 (lower is better)
Translates to: SNKHRLPVINWF*IQGSNHMVHFR
Trigger: TCTGAAGTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR TCA 72 bp GTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCT +
Preference number: 3 (lower is better)
Translates to: VPDDSFKSCSTR*KLPPEGRVTVP
Trigger: AGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR CCA 72 bp GGTATTATAACAAACACATGCCCAGAGGCTTTTTATTaGAGAAGGGTAATCCCCTCCCTACAGAGCAAGGCT +
Preference number: 3 (lower is better)
Translates to: GIITNTCPEAFY*RRVIPSLQSKA
Trigger: AGCCTTGCTCTGTAGGGAGGGGATTACCCTTCTCCAATAAAAAGCCTCTGGGCATGTGTTTGTTATAATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521732.5
3UTR-3UTR CAA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CAA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTATCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CAA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR-3UTR CAA 90 bp CTGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTTGGATTCATCTCTGATGCCATTATaGACTTTCACTATGACCTGT +
Preference number: 3 (lower is better)
Translates to: LEHLQQTQAPCDQLVLDSSLMPL*TFTMTC
Trigger: ACAGGTCATAGTGAAAGTCAATAATGGCATCAGAGA...TGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR CAA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAGCTCCCTGTGATCAATaGGTTTTGGATTCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPAPCDQ*VLDSGV
Trigger: GACCCCTGAATCCAAAACCAATTGATCACAGGGAGC...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR GCA 72 bp GGTCAGATTTCTTACTGCATCCCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGAGTCAAAATGTTGAAG +
Preference number: 3 (lower is better)
Translates to: GQISYCIPSRVH*SVVSRRVKMLK
Trigger: CTTCAACATTTTGACTCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGGGATGCAGTAAGAAATCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
3UTR TCA 72 bp CCAACCACATGGTTCACTTCAGAGTCCACATCCAACTaGACCACATTAGAATCTCTAATAACTGTAATTCTG +
Preference number: 3 (lower is better)
Translates to: PTTWFTSESTSN*TTLESLITVIL
Trigger: CAGAATTACAGTTATTAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTCTGAAGTGAACCATGTGGTTGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTTCAATTGTTGTCCATaGCAGACACTTTGGATTCAA +
Preference number: 3 (lower is better)
Translates to: TVISPVGIACALNTSKFAFNCCP*QTLWIQ
Trigger: TTGAATCCAAAGTGTCTGCAATGGACAACAATTGAA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
3UTR TCA 72 bp GCTTATCATGGTGGCTGGCACTTAGTAAGTCCTCTATaGACAGACATTAGCTATGTTTATCGATATCTTCAA +
Preference number: 3 (lower is better)
Translates to: AYHGGWHLVSPL*TDISYVYRYLQ
Trigger: TTGAAGATATCGATAAACATAGCTAATGTCTGTTCATAGAGGACTTACTAAGTGCCAGCCACCATGATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
3UTR-3UTR CAA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTCAATACAAGTAAGTTaGCCACTCCTTCAATTGTTG +
Preference number: 3 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNESIQVS*PLLQLL
Trigger: CAACAATTGAAGGAGTGGCAAACTTACTTGTATTGA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GAVACCTSIVVLLASSVIMGAVA*CTSIVV
Trigger: GACGACGATGGAGGTGCAGCAGGCCACTGCCCCCAT...GATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CAA 72 bp GGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGTCTAGACTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVACCTSIVVL*ASSVISLDCPR
Trigger: CCTGGGGCAGTCTAGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCTGGCCATGGGGGCAGTaGCCTGCTGCACCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LSDPLDAGRNVACRSLLLWPWGQ*PAAPPS
Trigger: CGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCA...GAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGAGCTCTCGGATCCTCTaGATGCTGGCAGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: PWGQWPAAPPSSSCWLPRSSRIL*MLAETL
Trigger: CAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCT...CCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp TCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAGAGACGTGTGCCCCAGGCGCTGCTaGGCATCCCCTAATCCTTCC +
Preference number: 4 (lower is better)
Translates to: SVSSGRFTGGFMYRLRDVCPRRC*ASPNPS
Trigger: GGAAGGATTAGGGGATGCCCAGCAGCGCCTGGGGCA...CACGTCTCTGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGCAGACGGATTGGGGTaGGCCCCGCCAGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVADGLG*APPALG
Trigger: GCCTAGCGCTGGCGGGGCTCACCCCAATCCGTCTGC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGCAGCCCGTTCATATCTaGACTGTGCAACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWGQWPAAPPSSSCWLPRQPVHI*TVQLPA
Trigger: AGCAGGAAGTTGCACAGTTCAGATATGAACGGGCTG...CCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp GGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTGGCCTCCCCCGCAGTTaGACACTGCACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSCSHRAHCAAAMWSSVPGLPRS*TLHSSW
Trigger: CCAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCC...AGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR GCA 90 bp CTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSNELSDPLDAGRNVACRGAVAC*TSIVVL
Trigger: CAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC...CCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp GGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCGGATCCTCTGGATGCTaGCAGAAACGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GAVACCTSIVVLLASSVIGSSGC*QKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCC...GATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp ACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCAGGCCTCCCCCGCAGTTaGACACTGCACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TEQGSCSHRAHCAAAMWSGLPRS*TLHSSW
Trigger: CCAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCC...TGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR GCA 90 bp CCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATCACAGAGCCCACTGTaGAGCGGCAATGTGGTCATC +
Preference number: 4 (lower is better)
Translates to: PSLQSKAPVVTEPTVQRQSQSPL*SGNVVI
Trigger: GATGACCACATTGCCGCTGCACAGTGGGCTCTGTGA...TTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCTGGCCGTTCGGGACTaGGGACTGCGCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFLAVRD*GLRCPG
Trigger: GCCAGGACAGCGCAGTCCCCAGTCCCGAACGGCCAG...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGCCACCTCCTCTCCCTaGCCGTTCGGGACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFATSSP*PFGTGD
Trigger: GTCCCCAGTCCCGAACGGCCAGGGAGAGGAGGTGGC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGAGGGCTCGGGCGCTGTaGGTCTCCGTAGGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVRARAL*VSVGLP
Trigger: CGGGAGACCTACGGAGACCCACAGCGCCCGAGCCCT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGGACTTCAATTCTCTCTaGTGCTTACCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PWGQWPAAPPSSSCWLPRDFNSL*CLPLSA
Trigger: AGCAGAGAGAGGTAAGCATCAGAGAGAATTGAAGTC...CCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp GCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: APVVTEPTVQRQCGHQSLSAPRI*LPRWRA
Trigger: CGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGA...AAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR GCA 90 bp CCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTCTGCTGCTTGTAGTTaGTTAACGGCATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: PWGQWPAAPPSSSCWLPRSAACS*LTASLS
Trigger: ACTCAGTGATGCCGTTAAGCAACTACAAGCAGCAGA...CCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAGAVAC*TSIVVL
Trigger: CAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCAACCGTACGAAGACTGCCCCAGGCGCTaGTGGGCATCCCCTAATCCT +
Preference number: 4 (lower is better)
Translates to: SGCWQKRCLQVASAQPYEDCPRR*WASPNP
Trigger: AGGATTAGGGGATGCCCAGCAGCGCCTGGGGCAGTC...TTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAAAAGGCAGACGGATTaGGGTGAGCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGKRQTD*GEPRQR
Trigger: GCGCTGGCGGGGCTCACCCCAATCCGTCTGCCTTTT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCGTAGGTCTCCCGCGTaGTGCGGCGGTGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLRRSPA*CGGASL
Trigger: AAGCGAGGCACCGCCGCACCACGCGGGAGACCTACG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCGTAGGTCTCCCGCGTaGTGCGGCGGTGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWRRSPA*CGGASL
Trigger: AAGCGAGGCACCGCCGCACCACGCGGGAGACCTACG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTAGGGCTCGGGCGCTGTaGGTCTCCGTAGGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCRARAL*VSVGLP
Trigger: CGGGAGACCTACGGAGACCCACAGCGCCCGAGCCCT...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCGGTTACACTGTCACATaGGCCTCCCCCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: QGSCSHRAHCAAAMWSSVGYTVT*ASPAVA
Trigger: TGCAACTGCGGGGGAGGCCCATGTGACAGTGTAACC...GACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp GAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGGTTACACTGTCACATaGGCCTCCCCCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: EQGSCSHRAHCAAAMWSSGYTVT*ASPAVA
Trigger: TGCAACTGCGGGGGAGGCCCATGTGACAGTGTAACC...TGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp CCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAAATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCA +
Preference number: 4 (lower is better)
Translates to: PSLQSKAPVVTEPTVQRQICLPR*RALLTA
Trigger: TGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAAT...TTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCATGGTCCCGCTGCCTaGCTGCTGTGGCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGHGPAA*LLWPCS
Trigger: TGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTGCCCCAGGCGCTGCTaGGCATCCCCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLACPRRC*ASPLSA
Trigger: AGCAGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGGCCATGGGGGCAGTaGCCTGCTGCACCTCCATCG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVWPWGQ*PAAPPS
Trigger: CGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGAAGCAGGCCAGGAACTaGCGGGCTTGGAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVKQARN*RAWSPG
Trigger: CCCTGGACTCCAAGCCCGTCAGTTCCTGGCCTGCTT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TGGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTGCTTTACTGAAGCTTTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: WTGVDAYGAADQGCFTEALGTPH*HCGRGP
Trigger: TGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAA...AGCTTCAGTAAAGCAGCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTAGGTCTCCCGCGTGGTaGGGCGGTGCCTCGCTTATT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLARSPAW*GGASLI
Trigger: AATAAGCGAGGCACCGCCGCACCACGCGGGAGACCT...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGTCTCAGGCGGGTCTTaGCTGCCAACCGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAVSGGS*LPTAEL
Trigger: GAGCTCAGCGGTTGGCAGGCAAGACCCGCCTGAGAC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGTGCGGGTCTCATTGTaGAGCCGCTGCCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGVRVSL*SRCQLS
Trigger: TGAGAGCTGGCAGCGGCTGCACAATGAGACCCGCAC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGTCCCGCTGCCTGGCTaGTGTGGCCCTGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAVPLPG*CGPVHV
Trigger: GACATGAACAGGGCCACAGCAGCCAGGCAGCGGGAC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGTCCCGCTGCCTGGCTaGTGTGGCCCTGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVVPLPG*CGPVHV
Trigger: GACATGAACAGGGCCACAGCAGCCAGGCAGCGGGAC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGACTGCCCCAGGCGCTaGTGGGCATCCCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFDCPRR*WASPLS
Trigger: AGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCAGTC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGVISLD*PRRCWA
Trigger: TGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCAC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTGCCCCAGGCGCTGCTaGGCATCCCCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWCPRRC*ASPLSA
Trigger: AGCAGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTGGCCATGGGGGCAGTaGCCTGCTGCACCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWWPWGQ*PAAPPS
Trigger: CGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTGGCCATGGGGGCAGTaGCCTGCTGCACCTCCATCG +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFWPWGQ*PAAPPS
Trigger: CGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCCCATTGACACTGTaGCCGTGGACCAGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGSPLTL*PWTRVP
Trigger: CGGAACCCTGGTCCACGGCCACAGTGTCAATGGGGA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGCAGACGGATTGGGGTaGGCCCCGCCAGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEADGLG*APPALG
Trigger: GCCTAGCGCTGGCGGGGCTCACCCCAATCCGTCTGC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAACCGAGCGCCAGGCTaGGCTCAAAGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGNRAPG*AQSHFS
Trigger: GGAGAAATGGCTTTGAGCTCAGCCTGGCGCTCGGTT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGCGCAACGTTCACACTTaGATCCGGTGGTGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: SKAPVVTEPTVQRQCGHQRNVHT*IRWCCV
Trigger: TACGCAACACCACCGGATTCAAGTGTGAACGTTGCG...CTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp GTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAATCATTCACGTGCCTATaGGCGGCGGCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VVTEPTVQRQCGHQSLHKSFTCL*AAAPED
Trigger: ATCCTCTGGGGCCGCCGCTCATAGGCACGTGAATGA...TTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp AGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SGLLHLHRRPVGFLGDQSTGSET*RPLSHP
Trigger: TGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGT...AGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGAAGCAGGCCAGGAACTaGCGGGCTTGGAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLKQARN*RAWSPG
Trigger: CCCTGGACTCCAAGCCCGTCAGTTCCTGGCCTGCTT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCAGCCCGACTCTGAGTaGAGGCCAGCTTATCTCGGG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAQPDSE*RPAYLG
Trigger: CCCGAGATAAGCTGGCCTTCACTCAGAGTCGGGCTG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGCAGCCCGACTCTGAGTaGAGGCCAGCTTATCTCGGG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVQPDSE*RPAYLG
Trigger: CCCGAGATAAGCTGGCCTTCACTCAGAGTCGGGCTG...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGGGGAAGGTGTGCTCTaGGGGCCCTGGATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGGEGVL*GPWIVR
Trigger: TCTTACAATCCAGGGCCCTCAGAGCACACCTTCCCC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGGCGTATGCAGCCTGTaGAGGGTTTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLGVCSL*RVCWGP
Trigger: TGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGGCGTATGCAGCCTGTaGAGGGTTTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCGVCSL*RVCWGP
Trigger: TGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGTATGCAGCCTGTaGAGGGTTTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAGVCSL*RVCWGP
Trigger: TGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCC...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCGCGTGGTGCGGCGGTaGCTCGCTTATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCRVVRR*LAYFPS
Trigger: GGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCG...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCGCGTGGTGCGGCGGTaGCTCGCTTATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPRVVRR*LAYFPS
Trigger: GGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTAGGTCTCCCGCGTGGTaGGGCGGTGCCTCGCTTATT +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFRSPAW*GGASLI
Trigger: AATAAGCGAGGCACCGCCGCACCACGCGGGAGACCT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCAGGCGGGTCTTGCCTaGCAACCGCTGAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCQAGLA*QPLSSL
Trigger: AAGGGAGCTCAGCGGTTGGCAGGCAAGACCCGCCTG...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCAGGCGGGTCTTGCCTaGCAACCGCTGAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWQAGLA*QPLSSL
Trigger: AAGGGAGCTCAGCGGTTGGCAGGCAAGACCCGCCTG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCCGCAGTTGCACACTaGACAGTTCTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: QGSCSHRAHCAAAMWSSVPAVAH*TVLGYP
Trigger: AGGATAGCCAAGAACTGTGCAGTGTGCAACTGCGGG...GACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGGCCTCCCCCGCAGTTaGACACTGCACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFGLPRS*TLHSSW
Trigger: CCAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGGCCTCCCCCGCAGTTaGACACTGCACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVGLPRS*TLHSSW
Trigger: CCAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGSAPRI*LPRWRA
Trigger: CGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: VTEPTVQRQCGHQSLHKLSAPRI*LPRWRA
Trigger: CGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGA...CAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTTCATTGTGCAGCCGCTaGCAGCTCTCAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFSLCSR*QLSAWL
Trigger: GAGCCAGGCTGAGAGCTGGCAGCGGCTGCACAATGA...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGCGGGTCTCATTGTaGAGCCGCTGCCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFVRVSL*SRCQLS
Trigger: TGAGAGCTGGCAGCGGCTGCACAATGAGACCCGCAC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCTCATGGTCCCGCTaGCTGGCTGCTGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCFSWSR*LAAVAL
Trigger: CAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGAA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTTCTCATGGTCCCGCTaGCTGGCTGCTGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFFSWSR*LAAVAL
Trigger: CAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGAA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GATCTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCGCTAGACTCTGCCTTTaGTTGCAGTTCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: DLQSRSVPAASQGVSCTGARLCL*LQFSGL
Trigger: CAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCTAGC...GCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPMGAVA*CTSIVV
Trigger: GACGACGATGGAGGTGCAGCAGGCCACTGCCCCCAT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCTGCTGGCAGAAACGTTaGTTGCAGGTCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSDPLDAGRNVACRSLLLCWQKR*LQVASA
Trigger: AGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA...GAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp CCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCAACCGTACGCTCGGATCCTCTGGATaGTGGCAGAAACGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PLDAGRNVACRSLLLNRTLGSSG*WQKRCL
Trigger: CAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAG...CGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGCCGCTGACCAGGGCTaGTTTACTGAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGAADQG*FTEAHW
Trigger: CCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTAAAAGGCAGACGGATTaGGGTGAGCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAKRQTD*GEPRQR
Trigger: GCGCTGGCGGGGCTCACCCCAATCCGTCTGCCTTTT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGACACTGCACAGTTCTTaGCTATCCTGGCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SKAPVVTEPTVQRQCGHQTLHSS*LSWRPH
Trigger: ATGGGGACGCCAGGATAGCCAAGAACTGTGCAGTGT...CTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCATGGTCCCGCTGCCTaGCTGCTGTGGCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWHGPAA*LLWPCS
Trigger: TGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TGGCCGTGGACCAGGGTTCCGGAACTGCTTCTGGGACGGACTTCAAATGCAATTGAGGCCCCATTGAGCTaGAGATTGCTGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: WPWTRVPELLLGRTSNAIEAPLS*RLLRQP
Trigger: TGGCTGTCTCAGCAATCTCCAGCTCAATGGGGCCTC...AATTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGGTCCACGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCTCTGTTGCCCAGGCTaGAGTGCAGGTACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGLCCPG*SAGTVS
Trigger: GCTGACTGTACCTGCACTCCAGCCTGGGCAACAGAG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGCSIPR*LRNQQL
Trigger: AAGCTGCTGGTTGCGCAGCCACCTCGGGATACTGCA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424408.6
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGCSIPR*LRNQQR
Trigger: TCTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522006.5
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCCTCCCCTCTCAGTTTaGAGCCCCTCCAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLPPLSV*SPSKGS
Trigger: GGAGCCCTTGGAGGGGCTCCAAACTGAGAGGGGAGG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522006.5
3UTR CAA 72 bp GCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAACCGTACGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: ALGSSGCWQKRC*QVASAQPYEAD
Trigger: ATCAGCTTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
3UTR CAA 72 bp ATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTaGCTTGCAGGTCGCTTCTGCTCAACCGTACGAAGC +
Preference number: 4 (lower is better)
Translates to: MSSRILWMLAET*LAGRFCSTVRS
Trigger: GCTTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCGCAGACGGATTGGGGTaGGCCCCGCCAGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESADGLG*APPALG
Trigger: GCCTAGCGCTGGCGGGGCTCACCCCAATCCGTCTGC...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATCGCAACGTTCACACTTaGATCCGGTGGTGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: PVVTEPTVQRQCGHQSLHRNVHT*IRWCCV
Trigger: TACGCAACACCACCGGATTCAAGTGTGAACGTTGCG...ATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp TTATTGGAGAAGGGTAATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGATCATTCACGTGCCTATaGGCGGCGGCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLEKGNPLPTEQGSCSHRSFTCL*AAAPED
Trigger: ATCCTCTGGGGCCGCCGCTCATAGGCACGTGAATGA...TCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGATTACCCTTCTCCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTCATTCACGTGCCTATaGGCGGCGGCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLASFTCL*AAAPED
Trigger: ATCCTCTGGGGCCGCCGCTCATAGGCACGTGAATGA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCAGCCCGACTCTGAGTaGAGGCCAGCTTATCTCGGG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWQPDSE*RPAYLG
Trigger: CCCGAGATAAGCTGGCCTTCACTCAGAGTCGGGCTG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCTGGCAGCCCGACTCTaGGTGAAGGCCAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLALAARL*VKASLS
Trigger: AGATAAGCTGGCCTTCACTCAGAGTCGGGCTGCCAG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GACACTGTGGCCGTGGACCAGGGTTCCGGAACTGCTTCTGGGACGGACTTCAAAGAGGAGAAACAATGGTaGAGACTCAATGGGACACTC +
Preference number: 4 (lower is better)
Translates to: DTVAVDQGSGTASGTDFKEEKQW*RLNGTL
Trigger: GAGTGTCCCATTGAGTCTTCACCATTGTTTCTCCTC...TTTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGGTCCACGGCCACAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGLGTPH*HCGRGP
Trigger: TGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCCAGGGCTGCTTTACTaGAGCTCACTGGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGPGLLY*SSLGVH
Trigger: ATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFSLLSV*SIPRWL
Trigger: CAGCCACCTCGGGATACTGCACACGGAGAGGAGGGA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSLLSV*SIPRWL
Trigger: CAGCCACCTCGGGATACTGCACACGGAGAGGAGGGA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTCATTGTGCAGCCGCTaGCAGCTCTCAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFSLCSR*QLSAWL
Trigger: GAGCCAGGCTGAGAGCTGGCAGCGGCTGCACAATGA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTCATTGTGCAGCCGCTaGCAGCTCTCAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLASLCSR*QLSAWL
Trigger: GAGCCAGGCTGAGAGCTGGCAGCGGCTGCACAATGA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGACTGCCCCAGGCGCTaGTGGGCATCCCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLDCPRR*WASPLS
Trigger: AGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCAGTC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWVISLD*PRRCWA
Trigger: TGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCAC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFVISLD*PRRCWA
Trigger: TGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCAC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLGAVAC*TSIVVL
Trigger: CAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LSNELSDPLDAGRNVACRGRNVA*RSLLLN
Trigger: GTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCC...CCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCACGGCTGGCAGAATTaGGGTGCTCCCCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFHGWQN*GAPLME
Trigger: TTCCATCAGGGGAGCACCCCAATTCTGCCAGCCGTG...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGGTTACACTGTCACATaGGCCTCCCCCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVGYTVT*ASPAVA
Trigger: TGCAACTGCGGGGGAGGCCCATGTGACAGTGTAACC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGGCTGCCTGGCTGCTGTaGCCCTGTTCATGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPAAWLL*PCSCLR
Trigger: CCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGC...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTGGCCATGGGGGCAGTaGCCTGCTGCACCTCCATCG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLWPWGQ*PAAPPS
Trigger: CGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGAGGCCCCATTGAGCTaGAGATTGCTGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGEAPLS*RLLRQP
Trigger: TGGCTGTCTCAGCAATCTCCAGCTCAATGGGGCCTC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTTTGACACTGTGGCCGTaGACCAGGGTTCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFLTLWP*TRVPEL
Trigger: CAGTTCCGGAACCCTGGTCCACGGCCACAGTGTCAA...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTGACACTGTGGCCGTaGACCAGGGTTCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVLTLWP*TRVPEL
Trigger: CAGTTCCGGAACCCTGGTCCACGGCCACAGTGTCAA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTCCCCATTGACACTGTaGCCGTGGACCAGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLASPLTL*PWTRVP
Trigger: CGGAACCCTGGTCCACGGCCACAGTGTCAATGGGGA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTAACCGAGCGCCAGGCTaGGCTCAAAGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFNRAPG*AQSHFS
Trigger: GGAGAAATGGCTTTGAGCTCAGCCTGGCGCTCGGTT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTCCTACACTGGCCAGTaGCTTCATCACAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: LPTEQGSCSHRAHCAAAMSYTGQ*LHHNLQ
Trigger: TTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGA...CATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp GGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCCTACACTGGCCAGTaGCTTCATCACAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: GSCSHRAHCAAAMWSSVPSYTGQ*LHHNLQ
Trigger: TTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGA...AGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp GAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGGTAGATGGTGGCGTTaGTTTCATTCACGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: EQGSCSHRAHCAAAMWSSGRWWR*FHSRAY
Trigger: ATAGGCACGTGAATGAAATCAACGCCACCATCTACC...TGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp GATCTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCATTAGCTTCTTGTTaGAGGTCCTGTGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: DLQSRSVPAASQGVSCTGSLASC*RSCAWS
Trigger: TGACCATGCACAGGACCTTCAACAAGAAGCTAATGA...GCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp AGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTGTTCTCTGGCTTGATTaGGGAGGTTCTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: SGLLHLHRRPVGFLGDQSVLWLD*GGSHFH
Trigger: ATGAAAGTGAGAACCTCCTCAATCAAGCCAGAGAAC...AGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGFWSEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGCAACACTTCTGGTCTaGGCAATGAGCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGATLLV*AMSSRI
Trigger: GATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCGGGCACATGGCACTaGTGTGGAGGGGTCCATATT +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVSGTWH*CGGVHI
Trigger: AATATGGACCCCTCCACATCAGTGCCATGTGCCCGA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAGCCCGACTCTaGGTGAAGGCCAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWLAARL*VKASLS
Trigger: AGATAAGCTGGCCTTCACTCAGAGTCGGGCTGCCAG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGGGGAAGGTGTGCTCTaGGGGCCCTGGATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFGEGVL*GPWIVR
Trigger: TCTTACAATCCAGGGCCCTCAGAGCACACCTTCCCC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCAGGGCTGCTTTACTaGAGCTCACTGGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAPGLLY*SSLGVH
Trigger: ATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCAGGCGGGTCTTGCCTaGCAACCGCTGAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLQAGLA*QPLSSL
Trigger: AAGGGAGCTCAGCGGTTGGCAGGCAAGACCCGCCTG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGAAAGAATCCAGCATTaGATTTCTCGGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGERIQH*ISRPQA
Trigger: CGCCTGCGGCCGAGAAATGCAATGCTGGATTCTTTC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGCTGGCAGAATTGGGGTaGTCCCCTGATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVLAELG*SPDGIS
Trigger: GGAGATTCCATCAGGGGAGCACCCCAATTCTGCCAG...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCCCGCAGTTGCACACTaGACAGTTCTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGPAVAH*TVLGYP
Trigger: AGGATAGCCAAGAACTGTGCAGTGTGCAACTGCGGG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGACTGCCCCAGGCGCTaGTGGGCATCCCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEDCPRR*WASPLS
Trigger: AGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCAGTC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEGAVAC*TSIVVL
Trigger: CAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCCAGGGTTCCGGAACTaGTTCTGGGACGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFPGFRN*FWDGLQ
Trigger: TTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGG...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCGCTGACCAGGGCTaGTTTACTGAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLAADQG*FTEAHW
Trigger: CCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGVFGQL*SVMSGC
Trigger: GCAGCCTGACATGACAGAGCACAGCTGCCCAAATAC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGCAGTCATAGCTCACTaGAGCCTTGAACTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGAVIAH*SLELLS
Trigger: GCTCAGGAGTTCAAGGCTGCAGTGAGCTATGACTGC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR GCA 90 bp CCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCACTTGGCTTGTTCCAGTaGTTTTCAACTAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLPTEQGSCSHRAHCAAALGLFQ*FSTNSS
Trigger: AGAGGAATTAGTTGAAAAGCACTGGAACAAGCCAAG...TGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR GCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGTATCCCGAGGTGGCTaGGCAACCAGCAGCTTAGGA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCVSRGG*ATSSLG
Trigger: TCCTAAGCTGCTGGTTGCGCAGCCACCTCGGGATAC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424408.6
CDS-3UTR CCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTCTGGCCGTTCGGGACTaGGGACTGCGCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSILAVRD*GLRCPG
Trigger: GCCAGGACAGCGCAGTCCCCAGTCCCGAACGGCCAG...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAAAAGGCAGACGGATTaGGGTGAGCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLKRQTD*GEPRQR
Trigger: GCGCTGGCGGGGCTCACCCCAATCCGTCTGCCTTTT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCAGGGCTCGGGCGCTGTaGGTCTCCGTAGGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESRARAL*VSVGLP
Trigger: CGGGAGACCTACGGAGACCCACAGCGCCCGAGCCCT...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCACGGCTGGCAGAATTaGGGTGCTCCCCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPHGWQN*GAPLME
Trigger: TTCCATCAGGGGAGCACCCCAATTCTGCCAGCCGTG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGGACAGGGGCACGGCTaGCAGAATTGGGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFGQGHG*QNWGAP
Trigger: GGGAGCACCCCAATTCTGCCAGCCGTGCCCCTGTCC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGGTTACACTGTCACATaGGCCTCCCCCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWGYTVT*ASPAVA
Trigger: TGCAACTGCGGGGGAGGCCCATGTGACAGTGTAACC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp ACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCAACTTATCACAGCTTATaGTTGGGCAGTCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: TEQGSCSHRAHCAAAMWSTYHSL*LGSPCL
Trigger: CAGGCATGGACTGCCCAACCATAAGCTGTGATAAGT...TGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368640.8
CDS-3UTR CCA 90 bp GTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCA +
Preference number: 4 (lower is better)
Translates to: VTEPTVQRQCGHQSLHKLICLPR*RALLTA
Trigger: TGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAAT...CAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATGCCCCAGGCGCTGCTaGGCATCCCCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKECPRRC*ASPLSA
Trigger: AGCAGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTTCTGGTCTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSGLSNELSDPLDAGRNVLDCWP*GQWPAA
Trigger: TGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAA...AACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAGTTGGTTAGATTGTTaGCCATGGGGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGSWLDC*PWGQWP
Trigger: AGGCCACTGCCCCCATGGCCAACAATCTAACCAACT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCAGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LQSRSVPAASQGVSCTGSDSVTS*LDCWPW
Trigger: CCATGGCCAACAATCTAACCAACTGGTCACAGAATC...TGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGGATCCTCTGGATGCTaGCAGAAACGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGGSSGC*QKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTTGACACTGTGGCCGTaGACCAGGGTTCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFLTLWP*TRVPEL
Trigger: CAGTTCCGGAACCCTGGTCCACGGCCACAGTGTCAA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGACACTGTGGCCGTaGACCAGGGTTCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCLTLWP*TRVPEL
Trigger: CAGTTCCGGAACCCTGGTCCACGGCCACAGTGTCAA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTGTGGGCTCTCTGAATaGACACTGTCTTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SKAPVVTEPTVQRQCGHQCGLSE*TLSSES
Trigger: TGACTCAGAAGACAGTGTCCATTCAGAGAGCCCACA...CTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp AGGGTAATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGTGTGGGCTCTCTGAATaGACACTGTCTTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RVIPSLQSKAPVVTEPTVCGLSE*TLSSES
Trigger: TGACTCAGAAGACAGTGTCCATTCAGAGAGCCCACA...CACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGATTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
3UTR CAA 72 bp TCAATCACAAAGTGGCGTATGCAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGTGTCAGTAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: SITKWRMQPVKG*LGAKRGVSRDS
Trigger: AGAATCTCTACTGACACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCCACTTTGTGATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR TCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCAGCAGACGGATTGGGGTaGGCCCCGCCAGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKAADGLG*APPALG
Trigger: GCCTAGCGCTGGCGGGGCTCACCCCAATCCGTCTGC...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAAGCCATTTCTCCGCTaGCATCCAGTAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGKPFLR*HPVVLF
Trigger: GAAGAGCACTACTGGATGTCAGCGGAGAAATGGCTT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGTGCACACAGTATCCTaGGCCGTCCAAACACTCGTT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAVHTVS*AVQTLV
Trigger: AACGAGTGTTTGGACGGCTCAGGATACTGTGTGCAC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGTGGGCTCGGTAGATGGTGGCGTTaGTTTCATTCACGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SPLCSGNVVISPFINCGLGRWWR*FHSRAY
Trigger: ATAGGCACGTGAATGAAATCAACGCCACCATCTACC...GAGCCCACAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp GCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCTGACAATTTTGTTTTaGGGAGGTAGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: APVVTEPTVQRQCGHQSLLTILF*GGRWWR
Trigger: ACGCCACCATCTACCTCCTCAAAACAAAATTGTCAG...AAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCGAGCTCCCGTTGGGTaGAAAATGGTTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWRAPVG*KMVDGF
Trigger: GAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCAGCCCGTTCATATCTaGACTGTGCAACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGQPVHI*TVQLPA
Trigger: AGCAGGAAGTTGCACAGTTCAGATATGAACGGGCTG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGCAACACTTCTGGTCTaGGCAATGAGCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAATLLV*AMSSRI
Trigger: GATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAAGCAGGCCAGGAACTaGCGGGCTTGGAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEKQARN*RAWSPG
Trigger: CCCTGGACTCCAAGCCCGTCAGTTCCTGGCCTGCTT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCGGGCACATGGCACTaGTGTGGAGGGGTCCATATT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSGTWH*CGGVHI
Trigger: AATATGGACCCCTCCACATCAGTGCCATGTGCCCGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTCGGGCACATGGCACTaGTGTGGAGGGGTCCATATT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCSGTWH*CGGVHI
Trigger: AATATGGACCCCTCCACATCAGTGCCATGTGCCCGA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TGGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTGCTTTACTGAAGCTCTGCTTGGGTGTAACTaGGGTGGAAAAATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: WTGVDAYGAADQGCFTEALLGCN*GGKISD
Trigger: ATCAGAGATTTTTCCACCTCAGTTACACCCAAGCAG...AGCTTCAGTAAAGCAGCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCCAGGGCTGCTTTACTaGAGCTCACTGGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFPGLLY*SSLGVH
Trigger: ATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCCAGGGCTGCTTTACTaGAGCTCACTGGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCPGLLY*SSLGVH
Trigger: ATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGG...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGTCTCAGGCGGGTCTTaGCTGCCAACCGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEVSGGS*LPTAEL
Trigger: GAGCTCAGCGGTTGGCAGGCAAGACCCGCCTGAGAC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGAAAGAATCCAGCATTaGATTTCTCGGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFERIQH*ISRPQA
Trigger: CGCCTGCGGCCGAGAAATGCAATGCTGGATTCTTTC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCTGGCAGAATTGGGGTaGTCCCCTGATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFLAELG*SPDGIS
Trigger: GGAGATTCCATCAGGGGAGCACCCCAATTCTGCCAG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGAGAGTCCGCAGATGTaGTCAGAGACATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGESPQM*SETCSP
Trigger: TGGTGAACATGTCTCTGAGCACATCTGCGGACTCTC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGCTAGTGTCAGCCACTaGTTCATCACTGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGASVSH*FITARL
Trigger: GAGTCTAGCAGTGATGAAGCAGTGGCTGACACTAGC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp TGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCAACCGTACGAAGCTGATGCTAGTGTCAGCCACTaGTTCATCACTGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: CWQKRCLQVASAQPYEADASVSH*FITARL
Trigger: GAGTCTAGCAGTGATGAAGCAGTGGCTGACACTAGC...ATCAGCTTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCGACTGCCCCAGGCGCTaGTGGGCATCCCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESDCPRR*WASPLS
Trigger: AGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCAGTC...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGTCTGAGCAATGAGGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KHHGDLDLAGNTSGLSNEVISLD*PRRCWA
Trigger: TGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCAC...CTCATTGCTCAGACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFMGAVA*CTSIVV
Trigger: GACGACGATGGAGGTGCAGCAGGCCACTGCCCCCAT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEMGAVA*CTSIVV
Trigger: GACGACGATGGAGGTGCAGCAGGCCACTGCCCCCAT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVGRNVA*RSLLLN
Trigger: GTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCCAGGGTTCCGGAACTaGTTCTGGGACGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFPGFRN*FWDGLQ
Trigger: TTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCCAGGGTTCCGGAACTaGTTCTGGGACGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPPGFRN*FWDGLQ
Trigger: TTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTTGCCCAGGCTGGAGTaGAGGTACAGTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFLPRLE*RYSQQS
Trigger: TGACTGCTGACTGTACCTGCACTCCAGCCTGGGCAA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCTGGCCGTTCGGGACTaGGGACTGCGCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATLAVRD*GLRCPG
Trigger: GCCAGGACAGCGCAGTCCCCAGTCCCGAACGGCCAG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGGGCTCGGGCGCTGTaGGTCTCCGTAGGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLRARAL*VSVGLP
Trigger: CGGGAGACCTACGGAGACCCACAGCGCCCGAGCCCT...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTACACTGCACAGTTCTTaGCTATCCTGGCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFTLHSS*LSWRPH
Trigger: ATGGGGACGCCAGGATAGCCAAGAACTGTGCAGTGT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGTGGGCTCTCTGAAACACTGCACAGTTCTTaGCTATCCTGGCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LCSGNVVISPFINCGLSETLHSS*LSWRPH
Trigger: ATGGGGACGCCAGGATAGCCAAGAACTGTGCAGTGT...TTCAGAGAGCCCACAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTACACTGCACAGTTCTTaGCTATCCTGGCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLATLHSS*LSWRPH
Trigger: ATGGGGACGCCAGGATAGCCAAGAACTGTGCAGTGT...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGATCACAGCTTATGGTTaGGCAGTCCATGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VTEPTVQRQCGHQSLHKLITAYG*AVHACR
Trigger: CCTACAGGCATGGACTGCCCAACCATAAGCTGTGAT...CAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368640.8
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTCCTGTTGTTTCTCATaGTCCCGCTGCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSCCFS*SRCLAA
Trigger: AGCAGCCAGGCAGCGGGACCATGAGAAACAACAGGA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCCTGTTGTTTCTCATaGTCCCGCTGCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSCCFS*SRCLAA
Trigger: AGCAGCCAGGCAGCGGGACCATGAGAAACAACAGGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWLDCWP*GQWPAA
Trigger: TGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLLDCWP*GQWPAA
Trigger: TGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCATTAAGTCATCCATACTaGTTCTCGAGTGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LQSRSVPAASQGVSCTGSLSHPY*FSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAA...TGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGAGGCCCCATTGAGCTaGAGATTGCTGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCEAPLS*RLLRQP
Trigger: TGGCTGTCTCAGCAATCTCCAGCTCAATGGGGCCTC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGGGACTGCGCTGTCCTaGCTTCCTTCTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVGTALS*LPSHIH
Trigger: ATGAATGTGAGAAGGAAGCCAGGACAGCGCAGTCCC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522006.5
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCGCAACCAGCAGAGATaGACGGAGCTTACAGTACGG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCRNQQR*TELTVR
Trigger: CCGTACTGTAAGCTCCGTCCATCTCTGCTGGTTGCG...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522006.5
CDS-3UTR TCA 90 bp CCTACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGCAGACGGATTGGGGTaGGCCCCGCCAGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: PTVFAVISSMIPIEHTIMADGLG*APPALG
Trigger: GCCTAGCGCTGGCGGGGCTCACCCCAATCCGTCTGC...CATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR TCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTAAGCCATTTCTCCGCTaGCATCCAGTAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFKPFLR*HPVVLF
Trigger: GAAGAGCACTACTGGATGTCAGCGGAGAAATGGCTT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTTGCCTGCCAACCGCTaGGCTCCCTTCAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLALPANR*APFNVK
Trigger: TTTGACATTGAAGGGAGCTCAGCGGTTGGCAGGCAA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGTGCACACAGTATCCTaGGCCGTCCAAACACTCGTT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCVHTVS*AVQTLV
Trigger: AACGAGTGTTTGGACGGCTCAGGATACTGTGTGCAC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGATTGGGGTGCTCCCCTaGTGGAATCTCCGATATAAC +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVIGVLP*WNLRYN
Trigger: GTTATATCGGAGATTCCATCAGGGGAGCACCCCAAT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCTTGCTCTACCAGCTaGCTTGCGTGGTTAATGGTG +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAACSTS*LAWLMV
Trigger: CACCATTAACCACGCAAGTCAGCTGGTAGAGCAAGC...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GAAGATTCTGTGACCAGTTGGTTAGATTGTTGGCCATGGGGGCAGTGGCCTGCTTGCAGTTCTCTGGCTTaGTTGAGGAGGTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: EDSVTSWLDCWPWGQWPACSSLA*LRRFSL
Trigger: AAGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCA...AGCAGGCCACTGCCCCCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLFWSEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFFWSEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAACACTTCTGGTCTaGGCAATGAGCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLATLLV*AMSSRI
Trigger: GATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTATTTCCCTCTCCTTGTaGTGTCTCTCACCACGGCAT +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFISLSL*CLSPRH
Trigger: ATGCCGTGGTGAGAGACATCACAAGGAGAGGGAAAT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCAACCGTACGAACCCCTAATCCTTCCTTaGAGGTTTACCTTACACTCC +
Preference number: 4 (lower is better)
Translates to: SGCWQKRCLQVASAQPYEPLILP*RFTLHS
Trigger: GGAGTGTAAGGTAAACCTTCAAGGAAGGATTAGGGG...TTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTTCGGGACTGGGGACTaGGCTGTCCTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFFGTGD*AVLASF
Trigger: GAAGGAAGCCAGGACAGCGCAGTCCCCAGTCCCGAA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTCAGGCGGGTCTTGCCTaGCAACCGCTGAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIQAGLA*QPLSSL
Trigger: AAGGGAGCTCAGCGGTTGGCAGGCAAGACCCGCCTG...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGTCTCAGGCGGGTCTTaGCTGCCAACCGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRVSGGS*LPTAEL
Trigger: GAGCTCAGCGGTTGGCAGGCAAGACCCGCCTGAGAC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGAAAGAATCCAGCATTaGATTTCTCGGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCERIQH*ISRPQA
Trigger: CGCCTGCGGCCGAGAAATGCAATGCTGGATTCTTTC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTCCCGCAGTTGCACACTaGACAGTTCTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAPAVAH*TVLGYP
Trigger: AGGATAGCCAAGAACTGTGCAGTGTGCAACTGCGGG...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLSAPRI*LPRWRA
Trigger: CGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATCATTGTGCAGCCGCTaGCAGCTCTCAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESLCSR*QLSAWL
Trigger: GAGCCAGGCTGAGAGCTGGCAGCGGCTGCACAATGA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTCTCATGGTCCCGCTaGCTGGCTGCTGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRFSWSR*LAAVAL
Trigger: CAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGAA...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEVISLD*PRRCWA
Trigger: TGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCAC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKGAVAC*TSIVVL
Trigger: CAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTGCTGGCAGAAACGTTaGTTGCAGGTCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLACWQKR*LQVASA
Trigger: AGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCTCGGATCCTCTGGATaGTGGCAGAAACGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFLGSSG*WQKRCL
Trigger: CAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVILVLE*TSTADW
Trigger: CCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTAT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AACACTTCTGGTCTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: NTSGLSNELSDPLDAGRNILVLE*TSTADW
Trigger: CCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTAT...GTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCACTTTTCCTCTGCTGTaGTACTTAGACTCGGGACTG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGTFPLL*YLDSGL
Trigger: CAGTCCCGAGTCTAAGTAGCACAGCAGAGGAAAAGT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVSVMSG*WTGVDA
Trigger: AGCATCAACTCCTGTCCAGCAGCCTGACATGACAGA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPVFGQL*SVMSGC
Trigger: GCAGCCTGACATGACAGAGCACAGCTGCCCAAATAC...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLVFGQL*SVMSGC
Trigger: GCAGCCTGACATGACAGAGCACAGCTGCCCAAATAC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCACGTAGGTCTCCCGCGTaGTGCGGCGGTGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKARRSPA*CGGASL
Trigger: AAGCGAGGCACCGCCGCACCACGCGGGAGACCTACG...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCCTGTTGTGTTCCGCTaGCAGTGCACACAGTATCCT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPPVVFR*QCTQYP
Trigger: AGGATACTGTGTGCACTGCCAGCGGAACACAACAGG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGGGACAGGGGCACGGCTaGCAGAATTGGGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKGQGHG*QNWGAP
Trigger: GGGAGCACCCCAATTCTGCCAGCCGTGCCCCTGTCC...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp ACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCACTTCAAAGATCAGGTTaGGATCTGAATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TEQGSCSHRAHCAAAMWSLQRSG*DLNFHC
Trigger: GCAGTGGAAATTCAGATCCCAACCTGATCTTTGAAG...TGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521732.5
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGACACTGCACAGTTCTTaGCTATCCTGGCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPTLHSS*LSWRPH
Trigger: ATGGGGACGCCAGGATAGCCAAGAACTGTGCAGTGT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLICLPR*RALLTA
Trigger: TGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAAT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGCTGCCTGGCTGCTGTaGCCCTGTTCATGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFAAWLL*PCSCLR
Trigger: CCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCCATGGTCCCGCTGCCTaGCTGCTGTGGCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESHGPAA*LLWPCS
Trigger: TGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATG...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTGCCCCAGGCGCTGCTaGGCATCCCCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNCPRRC*ASPLSA
Trigger: AGCAGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGACTGGCCATCAAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGAGTTGGTTAGATTGTTaGCCATGGGGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LTGHQTSWRLGSCWQHFWSWLDC*PWGQWP
Trigger: AGGCCACTGCCCCCATGGCCAACAATCTAACCAACT...CCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTTGATGGCCAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGGATCCTCTGGATGCTaGCAGAAACGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLGSSGC*QKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGAGCTCTCGGATCCTCTaGATGCTGGCAGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSSRIL*MLAETL
Trigger: CAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCT...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAAGGCCGTTGTCAGCTaGTGTTCGAACTTCTATGTC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGKAVVS*CSNFYV
Trigger: GACATAGAAGTTCGAACACCAGCTGACAACGGCCTT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGAGCTAATGACGAAGTaGGACAGCCCATCATTGTAC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGELMTK*DSPSLY
Trigger: GTACAATGATGGGCTGTCCCACTTCGTCATTAGCTC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTTGGAGTATTCCGCTCTaGGAGTTTCAGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFWSIPL*EFQSNR
Trigger: CCTGTTGCTCTGAAACTCCCAGAGCGGAATACTCCA...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCACTCTTGGCGGCTGTTaGCTGTTCCTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGTLGGC*LFLHID
Trigger: ATCAATATGGAGGAACAGCCAACAGCCGCCAAGAGT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTAAGTTCCTGTTTCCATaGGGCCTTCAAAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFKFLFP*GLQSKG
Trigger: CCCCTTGCTTTGAAGGCCCCATGGAAACAGGAACTT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TGTCTGAGAAGCAGAGGTGATGGAGGCCCCATTGAGCTGGAGATTGCTGAGACATTCCGGAACTGCTTCTaGGACGGACTTCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: CLRSRGDGGPIELEIAETFRNCF*DGLQMQ
Trigger: TTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAA...TGTCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCACCTCTGCTTCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTAGGGGTCCAACCACATaGTTCACTTCAGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFRGPTT*FTSEST
Trigger: TGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTAGGGGTCCAACCACATaGTTCACTTCAGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLARGPTT*FTSEST
Trigger: TGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCT...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCCCGCAGAGGTTCTaGCTCAAGAACCTACAGATG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAFPQRF*LKNLQM
Trigger: CATCTGTAGGTTCTTGAGCCAGAACCTCTGCGGGAA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424408.6
CDS-3UTR CCA 90 bp GCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTTTCCAGTCTTCTTCTTaGCTTGTTCCAGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: APVVTEPTVQRQCGHQSLFQSSS*LVPVLF
Trigger: GAAAAGCACTGGAACAAGCCAAGAAGAAGACTGGAA...AAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAACCGAGCGCCAGGCTaGGCTCAAAGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKENRAPG*AQSHFS
Trigger: GGAGAAATGGCTTTGAGCTCAGCCTGGCGCTCGGTT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGCTGACAATTTTGTTTTaGGGAGGTAGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: VTEPTVQRQCGHQSLHKLLTILF*GGRWWR
Trigger: ACGCCACCATCTACCTCCTCAAAACAAAATTGTCAG...CAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp AGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTATTTTCATAGACATTTaGTGCATCCAAAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SGLLHLHRRPVGFLGDQSIFIDI*CIQSLL
Trigger: CAGAAGGCTTTGGATGCATCAAATGTCTATGAAAAT...AGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGTTCTCTGGCTTGATTaGGGAGGTTCTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGVLWLD*GGSHFH
Trigger: ATGAAAGTGAGAACCTCCTCAATCAAGCCAGAGAAC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp TTTAAGTCATCCATACTGGTTCTCGAGTGCACTTCCACAGCTGACTGGCCATCATTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FKSSILVLECTSTADWPSFWSEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAA...TGATGGCCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTATGGATGACTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPTGSET*RPLSHP
Trigger: TGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLATGSET*RPLSHP
Trigger: TGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCTGGCAGCCCGACTCTaGGTGAAGGCCAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEELAARL*VKASLS
Trigger: AGATAAGCTGGCCTTCACTCAGAGTCGGGCTGCCAG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTATTTCCCTCTCCTTGTaGTGTCTCTCACCACGGCAT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCISLSL*CLSPRH
Trigger: ATGCCGTGGTGAGAGACATCACAAGGAGAGGGAAAT...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTATTTCCCTCTCCTTGTaGTGTCTCTCACCACGGCAT +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFISLSL*CLSPRH
Trigger: ATGCCGTGGTGAGAGACATCACAAGGAGAGGGAAAT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTTCAAAGCGAGTCACCTaGCCAAATTTCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFSKRVT*PNFPLL
Trigger: AAGGAGAGGGAAATTTGGTCAGGTGACTCGCTTTGA...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGCACAGGGCCACCGCTaGATCCAAAATCATAGAACA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCAQGHR*IQNHRT
Trigger: TGTTCTATGATTTTGGATTCAGCGGTGGCCCTGTGC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGGCACAGGGCCACCGCTaGATCCAAAATCATAGAACA +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPAQGHR*IQNHRT
Trigger: TGTTCTATGATTTTGGATTCAGCGGTGGCCCTGTGC...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGCACAGGGCCACCGCTaGATCCAAAATCATAGAACA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWAQGHR*IQNHRT
Trigger: TGTTCTATGATTTTGGATTCAGCGGTGGCCCTGTGC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCTGAGCACTGATTGGTaGGCCACCGAAGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLALSTDW*ATEVKL
Trigger: AAGTTTTACTTCGGTGGCTCACCAATCAGTGCTCAG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGAGGAGAAACAATGGTaGAGACTCAATGGGACACTC +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVEEKQW*RLNGTL
Trigger: GAGTGTCCCATTGAGTCTTCACCATTGTTTCTCCTC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp AGCCACACCTCCCAAATAAATGGGACCCTTGATTTTCCAGGTAGCTTCAGTAGGAGCAAGGGGTCACACTaGATGTCTGAGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHTSQINGTLDFPGSFSRSKGSH*MSEKQR
Trigger: CCTCTGCTTCTCAGACATTCAGTGTGACCCCTTGCT...CCTACTGAAGCTACCTGGAAAATCAAGGGTCCCATTTATTTGGGAGGTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSCSTR*KLPPEG
Trigger: TCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESSLLSV*SIPRWL
Trigger: CAGCCACCTCGGGATACTGCACACGGAGAGGAGGGA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCCGCGTGGTGCGGCGGTaGCTCGCTTATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TVISPVGIACALNTSKFARVVRR*LAYFPS
Trigger: GGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCG...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCTATAGCAGGATTCTaGAAAATTGGCCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAPIAGF*KIGQVG
Trigger: CCCCACTTGGCCAATTTTGCAGAATCCTGCTATAGG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp TTTTTATTGGAGAAGGGTAATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACCCCGCAGTTGCACACTaGACAGTTCTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: FLLEKGNPLPTEQGSCSHPAVAH*TVLGYP
Trigger: AGGATAGCCAAGAACTGTGCAGTGTGCAACTGCGGG...GTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGATTACCCTTCTCCAATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521732.5
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSAPRI*LPRWRA
Trigger: CGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCTCTACCAGCTGACTTaGGTGGTTAATGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLALYQLT*VVNGVH
Trigger: ATGGACACCATTAACCACGCAAGTCAGCTGGTAGAG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCGACAGGAAACAGAGTaGGGGTCTCATTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLRQETE*GSHCAA
Trigger: GGCTGCACAATGAGACCCGCACTCTGTTTCCTGTCG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATGTCCCGCTGCCTGGCTaGTGTGGCCCTGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNVPLPG*CGPVHV
Trigger: GACATGAACAGGGCCACAGCAGCCAGGCAGCGGGAC...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGAGAGTCCGCAGATGTaGTCAGAGACATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWESPQM*SETCSP
Trigger: TGGTGAACATGTCTCTGAGCACATCTGCGGACTCTC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGCTAGACTCTGCCTTTaGTTGCAGTTCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWARLCL*LQFSGL
Trigger: CAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCTAGC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAGACTGCCCCAGGCGCTaGTGGGCATCCCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPDCPRR*WASPLS
Trigger: AGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCAGTC...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRVISLD*PRRCWA
Trigger: TGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCAC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCAGGATAAACTGATCTaGAGTCTCGGTCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFQDKLI*SLGQFR
Trigger: CCGGAACTGACCGAGACTGCAGATCAGTTTATCCTG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCAGGATAAACTGATCTaGAGTCTCGGTCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLQDKLI*SLGQFR
Trigger: CCGGAACTGACCGAGACTGCAGATCAGTTTATCCTG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTAACGTATCTTCAAGATaGACAGGGCCACCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFNVSSR*TGPPLN
Trigger: ATTCAGCGGTGGCCCTGTGCATCTTGAAGATACGTT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCCAGGGTTTCTGTCTaGTCCAGTAAATTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAPRVSV*SSKLKS
Trigger: GGACTTCAATTTACTGGAGCAGACAGAAACCCTGGG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAGACATAGAAGATCATaGCATGGGAGGAACGAGTTC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGRHRRS*HGRNEF
Trigger: GAACTCGTTCCTCCCATGGCATGATCTTCTATGTCT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGCCGCTGACCAGGGCTaGTTTACTGAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEAADQG*FTEAHW
Trigger: CCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGCCGCTGACCAGGGCTaGTTTACTGAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFAADQG*FTEAHW
Trigger: CCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFSVMSG*WTGVDA
Trigger: AGCATCAACTCCTGTCCAGCAGCCTGACATGACAGA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSVMSG*WTGVDA
Trigger: AGCATCAACTCCTGTCCAGCAGCCTGACATGACAGA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCTTGGCTTGTTCCAGTaGTTTTCAACTAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: APVVTEPTVQRQCGHQSLLGLFQ*FSTNSS
Trigger: AGAGGAATTAGTTGAAAAGCACTGGAACAAGCCAAG...AAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGCTGGCCGTTCGGGACTaGGGACTGCGCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQLAVRD*GLRCPG
Trigger: GCCAGGACAGCGCAGTCCCCAGTCCCGAACGGCCAG...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAAAAGGCAGACGGATTaGGGTGAGCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKKRQTD*GEPRQR
Trigger: GCGCTGGCGGGGCTCACCCCAATCCGTCTGCCTTTT...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKECSIPR*LRNQQS
Trigger: ACTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230538.12
ENST00000389463.9
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCGTAGGTCTCCCGCGTaGTGCGGCGGTGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNERRSPA*CGGASL
Trigger: AAGCGAGGCACCGCCGCACCACGCGGGAGACCTACG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGAGGGCTCGGGCGCTGTaGGTCTCCGTAGGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQRARAL*VSVGLP
Trigger: CGGGAGACCTACGGAGACCCACAGCGCCCGAGCCCT...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAGGACAGGGGCACGGCTaGCAGAATTGGGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPGQGHG*QNWGAP
Trigger: GGGAGCACCCCAATTCTGCCAGCCGTGCCCCTGTCC...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCTTCAAGCATCTTCTaGGCCAACACCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLASSSIF*ANTSFS
Trigger: TGAGAAGCTGGTGTTGGCCCAGAAGATGCTTGAAGA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGGTCAAGTGCTTCCTaGAGATCTGACAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGWSSAS*RSDNLA
Trigger: TGCTAAGTTGTCAGATCTCCAGGAAGCACTTGACCA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GATCTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCTTGGACTAAATCATaGCTGAGGTTACTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: DLQSRSVPAASQGVSCTGSWTKS*LRLLRL
Trigger: TAACCTAAGTAACCTCAGCCATGATTTAGTCCAAGA...GCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp ATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGGTCAATAGCTTCTTaGACTAAATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MSSRILWMLAETLLAGRFWSIAS*TKSWLR
Trigger: CCTCAGCCATGATTTAGTCCAAGAAGCTATTGACCA...GAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTGGAGTATTCCGCTCTaGGAGTTTCAGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWWSIPL*EFQSNR
Trigger: CCTGTTGCTCTGAAACTCCCAGAGCGGAATACTCCA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGTTCCTGTTTCCATaGGGCCTTCAAAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPKFLFP*GLQSKG
Trigger: CCCCTTGCTTTGAAGGCCCCATGGAAACAGGAACTT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGAAGTTCCTGTTTCCATaGGGCCTTCAAAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLKFLFP*GLQSKG
Trigger: CCCCTTGCTTTGAAGGCCCCATGGAAACAGGAACTT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGAGGGGTCCAACCACATaGTTCACTTCAGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLRGPTT*FTSEST
Trigger: TGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTAC +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCVMSGC*TGVDAY
Trigger: GTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTAC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLVMSGC*TGVDAY
Trigger: GTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AAGGGTAATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTTTCCAGTCTTCTTCTTaGCTTGTTCCAGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KGNPLPTEQGSCSHRAHCFQSSS*LVPVLF
Trigger: GAAAAGCACTGGAACAAGCCAAGAAGAAGACTGGAA...ACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGATTACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp CTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGTGGGCTCTCTGAACCAGAGGCTTTTTATTaGAGAAGGGTAATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LCSGNVVISPFINCGLSEPEAFY*RRVIPS
Trigger: GGAGGGGATTACCCTTCTCCAATAAAAAGCCTCTGG...TTCAGAGAGCCCACAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521732.5
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGATCAGGTTGGGATCTaGATTTCCACTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCDQVGI*ISTAVT
Trigger: TGTGACTGCAGTGGAAATTCAGATCCCAACCTGATC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp TTATTGGAGAAGGGTAATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGATCAGGTTGGGATCTaGATTTCCACTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LLEKGNPLPTEQGSCSHRDQVGI*ISTAVT
Trigger: TGTGACTGCAGTGGAAATTCAGATCCCAACCTGATC...TCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGATTACCCTTCTCCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521732.5
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCCTACACTGGCCAGTaGCTTCATCACAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVSYTGQ*LHHNLQ
Trigger: TTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGGTAGATGGTGGCGTTaGTTTCATTCACGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWGRWWR*FHSRAY
Trigger: ATAGGCACGTGAATGAAATCAACGCCACCATCTACC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCTGACAATTTTGTTTTaGGGAGGTAGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFLTILF*GGRWWR
Trigger: ACGCCACCATCTACCTCCTCAAAACAAAATTGTCAG...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCTGACAATTTTGTTTTaGGGAGGTAGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLALTILF*GGRWWR
Trigger: ACGCCACCATCTACCTCCTCAAAACAAAATTGTCAG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp ACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: TEQGSCSHRAHCAAAMWSCSQHC*FVSFLG
Trigger: CCCTAAGAAAGATACAAATCAACAATGCTGAGAACA...TGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCATGCTTTCCTTCTaGACAAGTTGTCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGSMLSF*TSCPFL
Trigger: CAGAAAAGGACAACTTGTTCAGAAGGAAAGCATGGA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAACGAGCTCCCGTTGGGTaGAAAATGGTTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKERAPVG*KMVDGF
Trigger: GAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCG...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCATTAGCTTCTTGTTaGAGGTCCTGTGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVSLASC*RSCAWS
Trigger: TGACCATGCACAGGACCTTCAACAAGAAGCTAATGA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTGCAGTTCTCTGGCTTaGTTGAGGAGGTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWCSSLA*LRRFSL
Trigger: AAGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGTCTGAGCAATGAGGCAACACTTCTGGTCTaGGCAATGAGCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: KHHGDLDLAGNTSGLSNEATLLV*AMSSRI
Trigger: GATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGC...CTCATTGCTCAGACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAGGTACAGGATAAACTaGTCTGCAGTCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPRYRIN*SAVSVS
Trigger: ACTGACCGAGACTGCAGATCAGTTTATCCTGTACCT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTAGGTACAGGATAAACTaGTCTGCAGTCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCRYRIN*SAVSVS
Trigger: ACTGACCGAGACTGCAGATCAGTTTATCCTGTACCT...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCAAAGCGAGTCACCTaGCCAAATTTCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSKRVT*PNFPLL
Trigger: AAGGAGAGGGAAATTTGGTCAGGTGACTCGCTTTGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCTGCGAGATATAAGTaGGTCTTCTGGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLASARYK*VFWASI
Trigger: TATGGATGCCCAGAAGACTCACTTATATCTCGCAGA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TGGCCGTGGACCAGGGTTCCGGAACTGCTTCTGGGACGGACTTCAAATGCAATTGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: WPWTRVPELLLGRTSNAIVLLIY*LNFDSL
Trigger: AAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTAC...AATTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGGTCCACGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCATATCTTGTGGGTaGGACAGAGCTAATGACGAA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGFISCG*DRANDE
Trigger: TTCGTCATTAGCTCTGTCTCACCCACAAGATATGAA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGAGGAGAAACAATGGTaGAGACTCAATGGGACACTC +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAEEKQW*RLNGTL
Trigger: GAGTGTCCCATTGAGTCTTCACCATTGTTTCTCCTC...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGAGGAGAAACAATGGTaGAGACTCAATGGGACACTC +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCEEKQW*RLNGTL
Trigger: GAGTGTCCCATTGAGTCTTCACCATTGTTTCTCCTC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTGGAAAGGTGGCAATaGGAGTTTCTTGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGLERWQ*EFLGVF
Trigger: GAATACTCCAAGAAACTCTCATTGCCACCTTTCCAA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKELGTPH*HCGRGP
Trigger: TGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTTCGGGACTGGGGACTaGGCTGTCCTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNFGTGD*AVLASF
Trigger: GAAGGAAGCCAGGACAGCGCAGTCCCCAGTCCCGAA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCACGCGTGGTGCGGCGGTaGCTCGCTTATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKARVVRR*LAYFPS
Trigger: GGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCG...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGGTCTCCCGCGTGGTaGGGCGGTGCCTCGCTTATT +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPRSPAW*GGASLI
Trigger: AATAAGCGAGGCACCGCCGCACCACGCGGGAGACCT...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCAGTCTCAGGCGGGTCTTaGCTGCCAACCGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKAVSGGS*LPTAEL
Trigger: GAGCTCAGCGGTTGGCAGGCAAGACCCGCCTGAGAC...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTAGACACTTTTCACAGTaGTCTCCTGTTGTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLARHFSQ*SPVVFR
Trigger: GCGGAACACAACAGGAGAGCACTGTGAAAAGTGTCT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCCCGCAGTTGCACACTaGACAGTTCTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLPAVAH*TVLGYP
Trigger: AGGATAGCCAAGAACTGTGCAGTGTGCAACTGCGGG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATGGCCTCCCCCGCAGTTaGACACTGCACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNGLPRS*TLHSSW
Trigger: CCAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCC...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGGGCCTCCCCCGCAGTTaGACACTGCACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKGLPRS*TLHSSW
Trigger: CCAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCC...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCGACAGGAAACAGAGTaGGGGTCTCATTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEERQETE*GSHCAA
Trigger: GGCTGCACAATGAGACCCGCACTCTGTTTCCTGTCG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCTTCATATCTGAACTGTaGAACTTCCTGCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: LSDPLDAGRNVACRSLLLFISEL*NFLLNS
Trigger: TGAATTGAGCAGGAAGTTGCACAGTTCAGATATGAA...GAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp ACTTCTGGTCTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTATCACTGCTAGACTCTaGCTTTGCTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TSGLSNELSDPLDAGRNVITARL*LCLQFS
Trigger: AGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGAT...AACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGGGGCAGTGGCCTGCTaGACCTCCATCGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNGAVAC*TSIVVL
Trigger: CAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCTCGGATCCTCTGGATaGTGGCAGAAACGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLLGSSG*WQKRCL
Trigger: CAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGACTTTTCCTCTGCTGTaGTACTTAGACTCGGGACTG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLTFPLL*YLDSGL
Trigger: CAGTCCCGAGTCTAAGTAGCACAGCAGAGGAAAAGT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCCCAGGGTTTCTGTCTaGTCCAGTAAATTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLPRVSV*SSKLKS
Trigger: GGACTTCAATTTACTGGAGCAGACAGAAACCCTGGG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTATAGGCGTGCTCTATTaGTCTAGGGCTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAIGVLY*SRAVGK
Trigger: CTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTAT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAACCAGGGTTCCGGAACTaGTTCTGGGACGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEPGFRN*FWDGLQ
Trigger: TTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGG...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCGTCCAAACACTCGTTaGAATTGCCATTACAGTCGC +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWRPNTR*NCHYSR
Trigger: GCGACTGTAATGGCAATTCCAACGAGTGTTTGGACG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCCTGTTGTGTTCCGCTaGCAGTGCACACAGTATCCT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLPVVFR*QCTQYP
Trigger: AGGATACTGTGTGCACTGCCAGCGGAACACAACAGG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTACTTATCACAGCTTATaGTTGGGCAGTCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLATYHSL*LGSPCL
Trigger: CAGGCATGGACTGCCCAACCATAAGCTGTGATAAGT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCTTCAAGCATCTTCTaGGCCAACACCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSSSIF*ANTSFS
Trigger: TGAGAAGCTGGTGTTGGCCCAGAAGATGCTTGAAGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTGGTCAAGTGCTTCCTaGAGATCTGACAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAWSSAS*RSDNLA
Trigger: TGCTAAGTTGTCAGATCTCCAGGAAGCACTTGACCA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCGCTGCCTGGCTGCTGTaGCCCTGTTCATGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TVISPVGIACALNTSKFAAAWLL*PCSCLR
Trigger: CCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGC...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGACATGGTCCCGCTGCCTaGCTGCTGTGGCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRHGPAA*LLWPCS
Trigger: TGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATG...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAGTTGGTTAGATTGTTaGCCATGGGGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLSWLDC*PWGQWP
Trigger: AGGCCACTGCCCCCATGGCCAACAATCTAACCAACT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVDSVTS*LDCWPW
Trigger: CCATGGCCAACAATCTAACCAACTGGTCACAGAATC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGGATCCTCTGGATGCTaGCAGAAACGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLGSSGC*QKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAACATCATGGAGACTTaGATCTTGCTGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGNIMET*ILLATL
Trigger: AAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TCTGGTCTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTAACATCATGGAGACTTaGATCTTGCTGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: SGLSNELSDPLDAGRNVANIMET*ILLATL
Trigger: AAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTT...AGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTAAGGCCGTTGTCAGCTaGTGTTCGAACTTCTATGTC +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFKAVVS*CSNFYV
Trigger: GACATAGAAGTTCGAACACCAGCTGACAACGGCCTT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCCTTCTTTTGGAACTaGAAGCCCTTCATGCATCCT +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVSFFWN*KPFMHP
Trigger: AGGATGCATGAAGGGCTTCCAGTTCCAAAAGAAGGA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTGAAGTCCTTCTTTTaGAACTGGAAGCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGLKSFF*NWKPFM
Trigger: CATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCATTATCCAGTGAGATaGAGAACACGTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWHYPVR*RTRLTL
Trigger: CAGGGTCAGACGTGTTCTCCATCTCACTGGATAATG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCATTATCCAGTGAGATaGAGAACACGTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCHYPVR*RTRLTL
Trigger: CAGGGTCAGACGTGTTCTCCATCTCACTGGATAATG...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGAGCTAATGACGAAGTaGGACAGCCCATCATTGTAC +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCELMTK*DSPSLY
Trigger: GTACAATGATGGGCTGTCCCACTTCGTCATTAGCTC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGCAATGAGAGTTTCTTaGAGTATTCCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFAMRVS*SIPLWE
Trigger: CTCCCAGAGCGGAATACTCCAAGAAACTCTCATTGC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGGCAATGAGAGTTTCTTaGAGTATTCCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPAMRVS*SIPLWE
Trigger: CTCCCAGAGCGGAATACTCCAAGAAACTCTCATTGC...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTACTCTTGGCGGCTGTTaGCTGTTCCTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFTLGGC*LFLHID
Trigger: ATCAATATGGAGGAACAGCCAACAGCCGCCAAGAGT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTACTCTTGGCGGCTGTTaGCTGTTCCTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLATLGGC*LFLHID
Trigger: ATCAATATGGAGGAACAGCCAACAGCCGCCAAGAGT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGAAGTGTTCAAACTCTTaGCGGCTGTTGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWKCSNS*RLLAVP
Trigger: AGGAACAGCCAACAGCCGCCAAGAGTTTGAACACTT...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTTCCGGAACTGCTTCTaGGACGGACTTCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAFRNCF*DGLQMQ
Trigger: TTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTGACACTGTGGCCGTaGACCAGGGTTCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRLTLWP*TRVPEL
Trigger: CAGTTCCGGAACCCTGGTCCACGGCCACAGTGTCAA...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTCCCCATTGACACTGTaGCCGTGGACCAGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNSPLTL*PWTRVP
Trigger: CGGAACCCTGGTCCACGGCCACAGTGTCAATGGGGA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGATCAATTGGTTTTaGATTCAGGGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFVINWF*IQGSNH
Trigger: GTGGTTGGACCCCTGAATCCAAAACCAATTGATCAC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GCTCACTGGGTGTCCATCAATCACAAAGTGGCGTATGCAGCCTGTGAAGGGTTTGTGATCAATTGGTTTTaGATTCAGGGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: AHWVSINHKVAYAACEGFVINWF*IQGSNH
Trigger: GTGGTTGGACCCCTGAATCCAAAACCAATTGATCAC...AAACCCTTCACAGGCTGCATACGCCACTTTGTGATTGATGGACACCCAGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTCCCTGTGATCAATTaGTTTTGGATTCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWLPVIN*FWIQGS
Trigger: GGACCCCTGAATCCAAAACCAATTGATCACAGGGAG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCTCCCTGTGATCAATTaGTTTTGGATTCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFLPVIN*FWIQGS
Trigger: GGACCCCTGAATCCAAAACCAATTGATCACAGGGAG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCCATCAATCACAAAGTaGCGTATGCAGCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCPSITK*RMQPVK
Trigger: CTTCACAGGCTGCATACGCCACTTTGTGATTGATGG...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCAAGAACCTACAGATaGACGGAGCTTACAGTACGG +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSRTYR*TELTVR
Trigger: CCGTACTGTAAGCTCCGTCCATCTGTAGGTTCTTGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424408.6
3UTR CAA 72 bp CTCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTaGGATTCAGGGGTCCAACCACATGGTTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: LQQTQAPCDQLV*DSGVQPHGSLQ
Trigger: CTGAAGTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTTGCCTGCCAACCGCTaGGCTCCCTTCAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFLPANR*APFNVK
Trigger: TTTGACATTGAAGGGAGCTCAGCGGTTGGCAGGCAA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTACAGGTGCTTCCAATaGGTAAGGGGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWYRCFQ*VRGFHS
Trigger: ACTATGGAAACCCCTTACTCATTGGAAGCACCTGTA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTACAGGTGCTTCCAATaGGTAAGGGGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCYRCFQ*VRGFHS
Trigger: ACTATGGAAACCCCTTACTCATTGGAAGCACCTGTA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTCCTACACTGGCCAGTaGCTTCATCACAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFSYTGQ*LHHNLQ
Trigger: TTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCGCAACGTTCACACTTaGATCCGGTGGTGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFRNVHT*IRWCCV
Trigger: TACGCAACACCACCGGATTCAAGTGTGAACGTTGCG...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCTGACAATTTTGTTTTaGGGAGGTAGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPLTILF*GGRWWR
Trigger: ACGCCACCATCTACCTCCTCAAAACAAAATTGTCAG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATTGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PVVTEPTVQRQCGHQSLHCSQHC*FVSFLG
Trigger: CCCTAAGAAAGATACAAATCAACAATGCTGAGAACA...ATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCCATGCTTTCCTTCTaGACAAGTTGTCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLASMLSF*TSCPFL
Trigger: CAGAAAAGGACAACTTGTTCAGAAGGAAAGCATGGA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGCTTGCTCTACCAGCTaGCTTGCGTGGTTAATGGTG +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEACSTS*LAWLMV
Trigger: CACCATTAACCACGCAAGTCAGCTGGTAGAGCAAGC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTCGAGCTCCCGTTGGGTaGAAAATGGTTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIRAPVG*KMVDGF
Trigger: GAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCG...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTGCTTCCTGGAGATCTaGCAACTTAGCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLACFLEI*QLSIVV
Trigger: GACTACAATGCTAAGTTGTCAGATCTCCAGGAAGCA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTGCTTCCTGGAGATCTaGCAACTTAGCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFCFLEI*QLSIVV
Trigger: GACTACAATGCTAAGTTGTCAGATCTCCAGGAAGCA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGTTCTCTGGCTTGATTaGGGAGGTTCTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFVLWLD*GGSHFH
Trigger: ATGAAAGTGAGAACCTCCTCAATCAAGCCAGAGAAC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGTTCTCTGGCTTGATTaGGGAGGTTCTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWVLWLD*GGSHFH
Trigger: ATGAAAGTGAGAACCTCCTCAATCAAGCCAGAGAAC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGCAACACTTCTGGTCTaGGCAATGAGCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEATLLV*AMSSRI
Trigger: GATCCGAGAGCTCATTGCTCAGACCAGAAGTGTTGC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLTGSET*RPLSHP
Trigger: TGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGCTGGCAGCCCGACTCTaGGTGAAGGCCAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKLAARL*VKASLS
Trigger: AGATAAGCTGGCCTTCACTCAGAGTCGGGCTGCCAG...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGATTTCCCTCTCCTTGTaGTGTCTCTCACCACGGCAT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLISLSL*CLSPRH
Trigger: ATGCCGTGGTGAGAGACATCACAAGGAGAGGGAAAT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATGGGGAAGGTGTGCTCTaGGGGCCCTGGATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNGEGVL*GPWIVR
Trigger: TCTTACAATCCAGGGCCCTCAGAGCACACCTTCCCC...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTGGGGAAGGTGTGCTCTaGGGGCCCTGGATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATGEGVL*GPWIVR
Trigger: TCTTACAATCCAGGGCCCTCAGAGCACACCTTCCCC...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTCTGCGAGATATAAGTaGGTCTTCTGGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFSARYK*VFWASI
Trigger: TATGGATGCCCAGAAGACTCACTTATATCTCGCAGA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TGGCCGTGGACCAGGGTTCCGGAACTGCTTCTGGGACGGACTTCAAATGCAATTTGCTTATCTACTGACTaGACTTTGATTCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: WPWTRVPELLLGRTSNAICLSTD*TLIPFT
Trigger: TGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCA...AATTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGGTCCACGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGGTGAAATTAGCATACTaGGCACTGATTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPVKLAY*ALIGEP
Trigger: TGGCTCACCAATCAGTGCTCAGTATGCTAATTTCAC...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGTGAAATTAGCATACTaGGCACTGATTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLVKLAY*ALIGEP
Trigger: TGGCTCACCAATCAGTGCTCAGTATGCTAATTTCAC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAGACGAATGGAAAACTaGGATTTGGCACCAAAATCT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGRRMEN*DLAPKS
Trigger: AGATTTTGGTGCCAAATCTCAGTTTTCCATTCGTCT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCAGCAAGGGGTCACACTaGATGTCTGAGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSKGSH*MSEKQR
Trigger: CCTCTGCTTCTCAGACATTCAGTGTGACCCCTTGCT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGGCGTATGCAGCCTGTaGAGGGTTTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNGVCSL*RVCWGP
Trigger: TGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CCTACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGCGCGTGGTGCGGCGGTaGCTCGCTTATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTVFAVISSMIPIEHTIMRVVRR*LAYFPS
Trigger: GGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCG...CATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGGTCTCCCGCGTGGTaGGGCGGTGCCTCGCTTATT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNERSPAW*GGASLI
Trigger: AATAAGCGAGGCACCGCCGCACCACGCGGGAGACCT...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGAGGTCTCCCGCGTGGTaGGGCGGTGCCTCGCTTATT +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQRSPAW*GGASLI
Trigger: AATAAGCGAGGCACCGCCGCACCACGCGGGAGACCT...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGCAGGCGGGTCTTGCCTaGCAACCGCTGAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQQAGLA*QPLSSL
Trigger: AAGGGAGCTCAGCGGTTGGCAGGCAAGACCCGCCTG...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATTCTCATGGTCCCGCTaGCTGGCTGCTGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRFSWSR*LAAVAL
Trigger: CAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGAA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTTGAAGGTCCTGTaGATGGTCAATAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLALLKVL*MVNSFL
Trigger: CAAGAAGCTATTGACCATGCACAGGACCTTCAACAA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTATCACTGCTAGACTCTaGCTTTGCTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAITARL*LCLQFS
Trigger: AGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGAT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTCTGCTGCTTGTAGTTaGTTAACGGCATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLSAACS*LTASLS
Trigger: ACTCAGTGATGCCGTTAAGCAACTACAAGCAGCAGA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATATGGGGGCAGTGGCCTaGTGCACCTCCATCGTCGTC +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNMGAVA*CTSIVV
Trigger: GACGACGATGGAGGTGCAGCAGGCCACTGCCCCCAT...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLPSRVH*SVVSRR
Trigger: TCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPPSRVH*SVVSRR
Trigger: TCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFGRNVA*RSLLLN
Trigger: GTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEGRNVA*RSLLLN
Trigger: GTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATGCTGGCAGAAACGTTaGTTGCAGGTCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKECWQKR*LQVASA
Trigger: AGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCGGATCCTCTGGATaGTGGCAGAAACGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFLGSSG*WQKRCL
Trigger: CAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAG...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLILVLE*TSTADW
Trigger: CCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTAT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTCCATGCTCTTGACATaGCTTCTGTCAACTACCAAG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCSMLLT*LLSTTK
Trigger: CTTGGTAGTTGACAGAAGGCATGTCAAGAGCATGGA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCCATGCTCTTGACATaGCTTCTGTCAACTACCAAG +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSMLLT*LLSTTK
Trigger: CTTGGTAGTTGACAGAAGGCATGTCAAGAGCATGGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGAGACATAGAAGATCATaGCATGGGAGGAACGAGTTC +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWRHRRS*HGRNEF
Trigger: GAACTCGTTCCTCCCATGGCATGATCTTCTATGTCT...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTAGACATAGAAGATCATaGCATGGGAGGAACGAGTTC +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFRHRRS*HGRNEF
Trigger: GAACTCGTTCCTCCCATGGCATGATCTTCTATGTCT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCATAACTGTAATTCTGTaGCATCTGCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGITVIL*HLPSQR
Trigger: TCTCTGTGATGGCAGATGGCACAGAATTACAGTTAT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGAAAAGGCAGACGGATTaGGGTGAGCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQKRQTD*GEPRQR
Trigger: GCGCTGGCGGGGCTCACCCCAATCCGTCTGCCTTTT...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAACCTGTTGTGTTCCGCTaGCAGTGCACACAGTATCCT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEPVVFR*QCTQYP
Trigger: AGGATACTGTGTGCACTGCCAGCGGAACACAACAGG...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCACGGCTGGCAGAATTaGGGTGCTCCCCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATHGWQN*GAPLME
Trigger: TTCCATCAGGGGAGCACCCCAATTCTGCCAGCCGTG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGGACAGGGGCACGGCTaGCAGAATTGGGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPGQGHG*QNWGAP
Trigger: GGGAGCACCCCAATTCTGCCAGCCGTGCCCCTGTCC...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGGGTTACACTGTCACATaGGCCTCCCCCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKGYTVT*ASPAVA
Trigger: TGCAACTGCGGGGGAGGCCCATGTGACAGTGTAACC...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTGGTTACACTGTCACATaGGCCTCCCCCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATGYTVT*ASPAVA
Trigger: TGCAACTGCGGGGGAGGCCCATGTGACAGTGTAACC...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFICLPR*RALLTA
Trigger: TGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAAT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GAGAAGGGTAATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTTTCTTAGGGCGTATTaGTTTTCTCTTTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: EKGNPLPTEQGSCSHRAHFLRAY*FSLSDN
Trigger: ATTGTCAGAAAGAGAAAACCAATACGCCCTAAGAAA...GTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGATTACCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCCGTTGGGTGAAAAATaGTTGACGGCTTCTAATCTC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLPLGEK*LTASNL
Trigger: GAGATTAGAAGCCGTCAACCATTTTTCACCCAACGG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCCGTTGGGTGAAAAATaGTTGACGGCTTCTAATCTC +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPPLGEK*LTASNL
Trigger: GAGATTAGAAGCCGTCAACCATTTTTCACCCAACGG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTGGTCAAGTGCTTCCTaGAGATCTGACAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAWSSAS*RSDNLA
Trigger: TGCTAAGTTGTCAGATCTCCAGGAAGCACTTGACCA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGGTCAATAGCTTCTTaGACTAAATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVWSIAS*TKSWLR
Trigger: CCTCAGCCATGATTTAGTCCAAGAAGCTATTGACCA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTGCCCCAGGCGCTGCTaGGCATCCCCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVCPRRC*ASPLSA
Trigger: AGCAGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTGGCCATGGGGGCAGTaGCCTGCTGCACCTCCATCG +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVWPWGQ*PAAPPS
Trigger: CGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESLDCWP*GQWPAA
Trigger: TGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLADSVTS*LDCWPW
Trigger: CCATGGCCAACAATCTAACCAACTGGTCACAGAATC...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLDSVTS*LDCWPW
Trigger: CCATGGCCAACAATCTAACCAACTGGTCACAGAATC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTAAGTCATCCATACTaGTTCTCGAGTGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVLSHPY*FSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGCCACACCTCCCAAATAAATGGGACCCTTGATTTTCCAGGTAGCTTCAGTAGGGAGCTAATGACGAAGTaGGACAGCCCATCATTGTAC +
Preference number: 4 (lower is better)
Translates to: SHTSQINGTLDFPGSFSRELMTK*DSPSLY
Trigger: GTACAATGATGGGCTGTCCCACTTCGTCATTAGCTC...CCTACTGAAGCTACCTGGAAAATCAAGGGTCCCATTTATTTGGGAGGTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATCCCCATTGACACTGTaGCCGTGGACCAGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQSPLTL*PWTRVP
Trigger: CGGAACCCTGGTCCACGGCCACAGTGTCAATGGGGA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATCCCCATTGACACTGTaGCCGTGGACCAGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPSPLTL*PWTRVP
Trigger: CGGAACCCTGGTCCACGGCCACAGTGTCAATGGGGA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGTGATCAATTGGTTTTaGATTCAGGGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCVINWF*IQGSNH
Trigger: GTGGTTGGACCCCTGAATCCAAAACCAATTGATCAC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAAGCCATTTCTCCGCTaGCATCCAGTAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEKPFLR*HPVVLF
Trigger: GAAGAGCACTACTGGATGTCAGCGGAGAAATGGCTT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAACCGAGCGCCAGGCTaGGCTCAAAGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPNRAPG*AQSHFS
Trigger: GGAGAAATGGCTTTGAGCTCAGCCTGGCGCTCGGTT...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTGCCTGCCAACCGCTaGGCTCCCTTCAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESLPANR*APFNVK
Trigger: TTTGACATTGAAGGGAGCTCAGCGGTTGGCAGGCAA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTCTCCCGACAGGGTGTaGAAGAATCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSPDRV*KNPALH
Trigger: ATGCAATGCTGGATTCTTTCACACCCTGTCGGGAGA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGATTGGGGTGCTCCCCTaGTGGAATCTCCGATATAAC +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEIGVLP*WNLRYN
Trigger: GTTATATCGGAGATTCCATCAGGGGAGCACCCCAAT...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGCGCAACGTTCACACTTaGATCCGGTGGTGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRRNVHT*IRWCCV
Trigger: TACGCAACACCACCGGATTCAAGTGTGAACGTTGCG...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTCATTCACGTGCCTATaGGCGGCGGCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNESFTCL*AAAPED
Trigger: ATCCTCTGGGGCCGCCGCTCATAGGCACGTGAATGA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATTCATTCACGTGCCTATaGGCGGCGGCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNSFTCL*AAAPED
Trigger: ATCCTCTGGGGCCGCCGCTCATAGGCACGTGAATGA...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGCSQHC*FVSFLG
Trigger: CCCTAAGAAAGATACAAATCAACAATGCTGAGAACA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCCATGCTTTCCTTCTaGACAAGTTGTCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSMLSF*TSCPFL
Trigger: CAGAAAAGGACAACTTGTTCAGAAGGAAAGCATGGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCGCTTGCTCTACCAGCTaGCTTGCGTGGTTAATGGTG +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESACSTS*LAWLMV
Trigger: CACCATTAACCACGCAAGTCAGCTGGTAGAGCAAGC...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTGGGTGAAAAATGGTTaGCGGCTTCTAATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCWVKNG*RLLISS
Trigger: TGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCCGAGCTCCCGTTGGGTaGAAAATGGTTGACGGCTTC +
Preference number: 4 (lower is better)
Translates to: TVISPVGIACALNTSKFARAPVG*KMVDGF
Trigger: GAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCG...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAACAGCCCGTTCATATCTaGACTGTGCAACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEQPVHI*TVQLPA
Trigger: AGCAGGAAGTTGCACAGTTCAGATATGAACGGGCTG...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRFWSEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAA...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKETGSET*RPLSHP
Trigger: TGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTAAAGCAGGCCAGGAACTaGCGGGCTTGGAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVKQARN*RAWSPG
Trigger: CCCTGGACTCCAAGCCCGTCAGTTCCTGGCCTGCTT...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR TCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATCAGCCCGACTCTGAGTaGAGGCCAGCTTATCTCGGG +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNQPDSE*RPAYLG
Trigger: CCCGAGATAAGCTGGCCTTCACTCAGAGTCGGGCTG...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACTGGCAGCCCGACTCTaGGTGAAGGCCAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQLAARL*VKASLS
Trigger: AGATAAGCTGGCCTTCACTCAGAGTCGGGCTGCCAG...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTTCATATCTTGTGGGTaGGACAGAGCTAATGACGAA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAFISCG*DRANDE
Trigger: TTCGTCATTAGCTCTGTCTCACCCACAAGATATGAA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGAGGAGAAACAATGGTaGAGACTCAATGGGACACTC +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLEEKQW*RLNGTL
Trigger: GAGTGTCCCATTGAGTCTTCACCATTGTTTCTCCTC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTAGCAACAGGATCCCATaGAGGTGCATCTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLASNRIP*RCIFTF
Trigger: AAAAGTAAAGATGCACCTTCATGGGATCCTGTTGCT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTTGGAAAGGTGGCAATaGGAGTTTCTTGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWLERWQ*EFLGVF
Trigger: GAATACTCCAAGAAACTCTCATTGCCACCTTTCCAA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTAGACGAATGGAAAACTaGGATTTGGCACCAAAATCT +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFRRMEN*DLAPKS
Trigger: AGATTTTGGTGCCAAATCTCAGTTTTCCATTCGTCT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTAGCAAGGGGTCACACTaGATGTCTGAGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSISKGSH*MSEKQR
Trigger: CCTCTGCTTCTCAGACATTCAGTGTGACCCCTTGCT...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKLGTPH*HCGRGP
Trigger: TGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTATTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLLGTPH*HCGRGP
Trigger: TGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAA...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGAGTCCACATCCAACTaGACCACATTAGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCESTSN*TTLESL
Trigger: TAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGAGTCCACATCCAACTaGACCACATTAGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFESTSN*TTLESL
Trigger: TAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGAGTCCACATCCAACTaGACCACATTAGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLESTSN*TTLESL
Trigger: TAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGGCGTATGCAGCCTGTaGAGGGTTTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPGVCSL*RVCWGP
Trigger: TGGCCCCCAGCAAACCCTTCACAGGCTGCATACGCC...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAGGGCTGCTTTACTaGAGCTCACTGGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNPGLLY*SSLGVH
Trigger: ATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGG...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESCSTR*KLPPEG
Trigger: TCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSCSTR*KLPPEG
Trigger: TCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGGCTTTTCAGACACTaGGGTCCGCCTTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRWLFRH*GPPFPA
Trigger: CGCAGGGAAAGGCGGACCTCAGTGTCTGAAAAGCCA...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522006.5
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTTCGGGACTGGGGACTaGGCTGTCCTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEFGTGD*AVLASF
Trigger: GAAGGAAGCCAGGACAGCGCAGTCCCCAGTCCCGAA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGTTCGGGACTGGGGACTaGGCTGTCCTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQFGTGD*AVLASF
Trigger: GAAGGAAGCCAGGACAGCGCAGTCCCCAGTCCCGAA...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRSLLSV*SIPRWL
Trigger: CAGCCACCTCGGGATACTGCACACGGAGAGGAGGGA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQSLLSV*SIPRWL
Trigger: CAGCCACCTCGGGATACTGCACACGGAGAGGAGGGA...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAACACTCGTTGGAATTaGCATTACAGTCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLNTRWN*HYSRRA
Trigger: TGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGGTGCGGGTCTCATTGTaGAGCCGCTGCCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEVRVSL*SRCQLS
Trigger: TGAGAGCTGGCAGCGGCTGCACAATGAGACCCGCAC...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCGACAGGAAACAGAGTaGGGGTCTCATTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATRQETE*GSHCAA
Trigger: GGCTGCACAATGAGACCCGCACTCTGTTTCCTGTCG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGAGTCCGCAGATGTaGTCAGAGACATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEESPQM*SETCSP
Trigger: TGGTGAACATGTCTCTGAGCACATCTGCGGACTCTC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGGCCATCAAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGTCTGTTGTTGAAGGTCCTGTaGATGGTCAATAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LAIKHHGDLDLAGNTSGLLLKVL*MVNSFL
Trigger: CAAGAAGCTATTGACCATGCACAGGACCTTCAACAA...CAGACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTTGATGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCATATCTGAACTGTaGAACTTCCTGCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGFISEL*NFLLNS
Trigger: TGAATTGAGCAGGAAGTTGCACAGTTCAGATATGAA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTCTCGGATCCTCTGGATaGTGGCAGAAACGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSILGSSG*WQKRCL
Trigger: CAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAG...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAACGTATCTTCAAGATaGACAGGGCCACCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLNVSSR*TGPPLN
Trigger: ATTCAGCGGTGGCCCTGTGCATCTTGAAGATACGTT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCCCAGGGTTTCTGTCTaGTCCAGTAAATTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLPRVSV*SSKLKS
Trigger: GGACTTCAATTTACTGGAGCAGACAGAAACCCTGGG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AGCCACACCTCCCAAATAAATGGGACCCTTGATTTTCCAGGTAGCTTCAGTAGGAGACATAGAAGATCATaGCATGGGAGGAACGAGTTC +
Preference number: 4 (lower is better)
Translates to: SHTSQINGTLDFPGSFSRRHRRS*HGRNEF
Trigger: GAACTCGTTCCTCCCATGGCATGATCTTCTATGTCT...CCTACTGAAGCTACCTGGAAAATCAAGGGTCCCATTTATTTGGGAGGTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR GCA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGGGACGGACTTCAAATaGAATTTCAAACTTCAATCC +
Preference number: 4 (lower is better)
Translates to: LDESFHPKEELLFLLAGFGTDFK*NFKLQS
Trigger: GGATTGAAGTTTGAAATTGCATTTGAAGTCCGTCCC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GAGGAAGACTTTCTTCTAGGACTCGGAGACCATCAATTACCAGTCGGCCACTGCATAACTGTAATTCTGTaGCATCTGCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: EEDFLLGLGDHQLPVGHCITVIL*HLPSQR
Trigger: TCTCTGTGATGGCAGATGGCACAGAATTACAGTTAT...GCAGTGGCCGACTGGTAATTGATGGTCTCCGAGTCCTAGAAGAAAGTCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRVFGQL*SVMSGC
Trigger: GCAGCCTGACATGACAGAGCACAGCTGCCCAAATAC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTTCACCAGTAGGAATTaGGTGTGCTCTCAATACAAG +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPFTSRN*VCSQYK
Trigger: CTTGTATTGAGAGCACACGCAATTCCTACTGGTGAA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGTATCCCGAGGTGGCTaGGCAACCAGCAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQVSRGG*ATSRDG
Trigger: TCCATCTCTGCTGGTTGCGCAGCCACCTCGGGATAC...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522006.5
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQCSIPR*LRNQQS
Trigger: ACTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230538.12
ENST00000389463.9
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCACACGGCTGGCAGAATTaGGGTGCTCCCCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPHGWQN*GAPLME
Trigger: TTCCATCAGGGGAGCACCCCAATTCTGCCAGCCGTG...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTCAAAGATCAGGTTaGGATCTGAATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWLQRSG*DLNFHC
Trigger: GCAGTGGAAATTCAGATCCCAACCTGATCTTTGAAG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCTTCAAAGATCAGGTTaGGATCTGAATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLLQRSG*DLNFHC
Trigger: GCAGTGGAAATTCAGATCCCAACCTGATCTTTGAAG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCA +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESICLPR*RALLTA
Trigger: TGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAAT...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGGCTGCCTGGCTGCTGTaGCCCTGTTCATGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEAAWLL*PCSCLR
Trigger: CCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGC...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCTTGTAGTTCACTTTTaGCTCCATCTATTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QLDESFHPKEELLFLLAGLVVHF*LHLFLH
Trigger: ATGCAGAAATAGATGGAGCCAAAAGTGAACTACAAG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTGGTCAATAGCTTCTTaGACTAAATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLWSIAS*TKSWLR
Trigger: CCTCAGCCATGATTTAGTCCAAGAAGCTATTGACCA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTGGTCAATAGCTTCTTaGACTAAATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWWSIAS*TKSWLR
Trigger: CCTCAGCCATGATTTAGTCCAAGAAGCTATTGACCA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATLDCWP*GQWPAA
Trigger: TGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTTAGATTGTTGGCCATaGGGGCAGTGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKLDCWP*GQWPAA
Trigger: TGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGAGTTGGTTAGATTGTTaGCCATGGGGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRSWLDC*PWGQWP
Trigger: AGGCCACTGCCCCCATGGCCAACAATCTAACCAACT...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGGATCCTCTGGATGCTaGCAGAAACGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRGSSGC*QKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTAACATCATGGAGACTTaGATCTTGCTGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCNIMET*ILLATL
Trigger: AAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTT...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTTAAGTCATCCATACTaGTTCTCGAGTGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLALSHPY*FSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGAAGTCCTTCTTTTaGAACTGGAAGCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCLKSFF*NWKPFM
Trigger: CATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GATCAATTGGTTTTGGATTCAGGGGTCCAACCACATGGTTCACTTCAGAGTCCACATTATCCAGTGAGATaGAGAACACGTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: DQLVLDSGVQPHGSLQSPHYPVR*RTRLTL
Trigger: CAGGGTCAGACGTGTTCTCCATCTCACTGGATAATG...TGGACTCTGAAGTGAACCATGTGGTTGGACCCCTGAATCCAAAACCAATTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATTGACACTGTGGCCGTaGACCAGGGTTCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPLTLWP*TRVPEL
Trigger: CAGTTCCGGAACCCTGGTCCACGGCCACAGTGTCAA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTTGGATTCACTCCCTGTGATCAATTaGTTTTGGATTCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LEHLQQTQAPCDQLVLDSLPVIN*FWIQGS
Trigger: GGACCCCTGAATCCAAAACCAATTGATCACAGGGAG...TGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTAC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEVMSGC*TGVDAY
Trigger: GTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTAC +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFVMSGC*TGVDAY
Trigger: GTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TCCTGTTTCCATGGGGCCTTCAAAGCAAGGGGTCACACTGAATGTCTGAGAAGCAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SCFHGAFKARGHTECLRSKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...GCTTCTCAGACATTCAGTGTGACCCCTTGCTTTGAAGGCCCCATGGAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGAAAGTTATCTTCCCTaGAAGAAAGGTGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAESYLP*KKGESE
Trigger: CTCAGATTCACCTTTCTTCCAGGGAAGATAACTTTC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGAACCGAGCGCCAGGCTaGGCTCAAAGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQNRAPG*AQSHFS
Trigger: GGAGAAATGGCTTTGAGCTCAGCCTGGCGCTCGGTT...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR TCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTTGCCTGCCAACCGCTaGGCTCCCTTCAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATLPANR*APFNVK
Trigger: TTTGACATTGAAGGGAGCTCAGCGGTTGGCAGGCAA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTATTGGGGTGCTCCCCTaGTGGAATCTCCGATATAAC +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIIGVLP*WNLRYN
Trigger: GTTATATCGGAGATTCCATCAGGGGAGCACCCCAAT...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGATCAGGTTGGGATCTaGATTTCCACTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFDQVGI*ISTAVT
Trigger: TGTGACTGCAGTGGAAATTCAGATCCCAACCTGATC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGATCAGGTTGGGATCTaGATTTCCACTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEDQVGI*ISTAVT
Trigger: TGTGACTGCAGTGGAAATTCAGATCCCAACCTGATC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCGCAACGTTCACACTTaGATCCGGTGGTGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNRNVHT*IRWCCV
Trigger: TACGCAACACCACCGGATTCAAGTGTGAACGTTGCG...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTCATTCACGTGCCTATaGGCGGCGGCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVSFTCL*AAAPED
Trigger: ATCCTCTGGGGCCGCCGCTCATAGGCACGTGAATGA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCTGACAATTTTGTTTTaGGGAGGTAGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLLTILF*GGRWWR
Trigger: ACGCCACCATCTACCTCCTCAAAACAAAATTGTCAG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLACSQHC*FVSFLG
Trigger: CCCTAAGAAAGATACAAATCAACAATGCTGAGAACA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCCAGCCCGTTCATATCTaGACTGTGCAACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESQPVHI*TVQLPA
Trigger: AGCAGGAAGTTGCACAGTTCAGATATGAACGGGCTG...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGACAGGCTCAGAGACGTaGAGGCCTTTAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRTGSET*RPLSHP
Trigger: TGGATGACTTAAAGGCCTTCACGTCTCTGAGCCTGT...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATCGGGCACATGGCACTaGTGTGGAGGGGTCCATATT +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQSGTWH*CGGVHI
Trigger: AATATGGACCCCTCCACATCAGTGCCATGTGCCCGA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGCACAGGGCCACCGCTaGATCCAAAATCATAGAACA +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRAQGHR*IQNHRT
Trigger: TGTTCTATGATTTTGGATTCAGCGGTGGCCCTGTGC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGGGGAAGGTGTGCTCTaGGGGCCCTGGATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRGEGVL*GPWIVR
Trigger: TCTTACAATCCAGGGCCCTCAGAGCACACCTTCCCC...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTCTGCTCCAGTAAATTaGAGTCCTTCTTTTGGAACT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLASAPVN*SPSFGT
Trigger: AGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTCTGCTCCAGTAAATTaGAGTCCTTCTTTTGGAACT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSAPVN*SPSFGT
Trigger: AGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWVLLIY*LNFDSL
Trigger: AAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTAC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCTGAGCACTGATTGGTaGGCCACCGAAGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEELSTDW*ATEVKL
Trigger: AAGTTTTACTTCGGTGGCTCACCAATCAGTGCTCAG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGGCATTACTTGTGGGTaGGACAGAGCTAATGACGAA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEGITCG*DRANDE
Trigger: TTCGTCATTAGCTCTGTCTCACCCACAAGTAATGCC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651860.1
CDS-3UTR GCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATGTATCCCGAGGTGGCTaGGCAACCAGCAGAGTACGG +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDVSRGG*ATSRVR
Trigger: CCGTACTCTGCTGGTTGCGCAGCCACCTCGGGATAC...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230538.12
ENST00000389463.9
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGACTGGCAGAATTGGGGTaGTCCCCTGATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRLAELG*SPDGIS
Trigger: GGAGATTCCATCAGGGGAGCACCCCAATTCTGCCAG...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCCTATAGCAGGATTCTaGAAAATTGGCCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEPIAGF*KIGQVG
Trigger: CCCCACTTGGCCAATTTTGCAGAATCCTGCTATAGG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCCGCAGTTGCACACTaGACAGTTCTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNPAVAH*TVLGYP
Trigger: AGGATAGCCAAGAACTGTGCAGTGTGCAACTGCGGG...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNSAPRI*LPRWRA
Trigger: CGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGA...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCTACCAGCTGACTTaGGTGGTTAATGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFLYQLT*VVNGVH
Trigger: ATGGACACCATTAACCACGCAAGTCAGCTGGTAGAG...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGTGCGGGTCTCATTGTaGAGCCGCTGCCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVVRVSL*SRCQLS
Trigger: TGAGAGCTGGCAGCGGCTGCACAATGAGACCCGCAC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGAGAGTCCGCAGATGTaGTCAGAGACATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRESPQM*SETCSP
Trigger: TGGTGAACATGTCTCTGAGCACATCTGCGGACTCTC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGCTAGTGTCAGCCACTaGTTCATCACTGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRASVSH*FITARL
Trigger: GAGTCTAGCAGTGATGAAGCAGTGGCTGACACTAGC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp AAACATCATGGAGACTTGGATCTTGCTGGCAACACTTCTGGTCTGAGCAATGAGCCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KHHGDLDLAGNTSGLSNEPSRVH*SVVSRR
Trigger: TCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGG...CTCATTGCTCAGACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR GCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTATGCTGGCAGAAACGTTaGTTGCAGGTCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLCWQKR*LQVASA
Trigger: AGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRILVLE*TSTADW
Trigger: CCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTAT...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGCAGGATAAACTGATCTaGAGTCTCGGTCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRQDKLI*SLGQFR
Trigger: CCGGAACTGACCGAGACTGCAGATCAGTTTATCCTG...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGACTTTTCCTCTGCTGTaGTACTTAGACTCGGGACTG +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEETFPLL*YLDSGL
Trigger: CAGTCCCGAGTCTAAGTAGCACAGCAGAGGAAAAGT...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAATAGGCGTGCTCTATTaGTCTAGGGCTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEIGVLY*SRAVGK
Trigger: CTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTAT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGGGACGGACTTCAAATaGAATTTCAAACTTCAATCC +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLGTDFK*NFKLQS
Trigger: GGATTGAAGTTTGAAATTGCATTTGAAGTCCGTCCC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGGGACGGACTTCAAATaGAATTTCAAACTTCAATCC +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWGTDFK*NFKLQS
Trigger: GGATTGAAGTTTGAAATTGCATTTGAAGTCCGTCCC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCACCAGGGTTCCGGAACTaGTTCTGGGACGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPPGFRN*FWDGLQ
Trigger: TTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGG...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTATAACTGTAATTCTGTaGCATCTGCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAITVIL*HLPSQR
Trigger: TCTCTGTGATGGCAGATGGCACAGAATTACAGTTAT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGGCCGCTGACCAGGGCTaGTTTACTGAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEAADQG*FTEAHW
Trigger: CCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGC...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCAATTGTTGTCCATTaGAGACACTTTGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVSIVVH*RHFGFK
Trigger: CTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTGGACCAGGGTTCCGGAACTGCTTCTGGGACGGACTTCAAATGCAATTTCAATCAATTGTTGTCCATTaGAGACACTTTGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: RGPGFRNCFWDGLQMQFQSIVVH*RHFGFK
Trigger: CTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA...TTGAAATTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGGTCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGTGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQCSIPR*LRNQQS
Trigger: ACTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCA...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTGTTGTGTTCCGCTaGCAGTGCACACAGTATCCT +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATPVVFR*QCTQYP
Trigger: AGGATACTGTGTGCACTGCCAGCGGAACACAACAGG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATICLPR*RALLTA
Trigger: TGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAAT...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATCTTCAAGCATCTTCTaGGCCAACACCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESSSIF*ANTSFS
Trigger: TGAGAAGCTGGTGTTGGCCCAGAAGATGCTTGAAGA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCTTCAAGCATCTTCTaGGCCAACACCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESSSIF*ANTSFS
Trigger: TGAGAAGCTGGTGTTGGCCCAGAAGATGCTTGAAGA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCTTGTAGTTCACTTTTaGCTCCATCTATTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLALVVHF*LHLFLH
Trigger: ATGCAGAAATAGATGGAGCCAAAAGTGAACTACAAG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AACACTTCTGGTCTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACCTTGTAGTTCACTTTTaGCTCCATCTATTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: NTSGLSNELSDPLDAGRNLVVHF*LHLFLH
Trigger: ATGCAGAAATAGATGGAGCCAAAAGTGAACTACAAG...GTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLDSVTS*LDCWPW
Trigger: CCATGGCCAACAATCTAACCAACTGGTCACAGAATC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGCTCTCGGATCCTCTaGATGCTGGCAGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLSSRIL*MLAETL
Trigger: CAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCT...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCAAGGCCGTTGTCAGCTaGTGTTCGAACTTCTATGTC +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFKAVVS*CSNFYV
Trigger: GACATAGAAGTTCGAACACCAGCTGACAACGGCCTT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGAGCTAATGACGAAGTaGGACAGCCCATCATTGTAC +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFELMTK*DSPSLY
Trigger: GTACAATGATGGGCTGTCCCACTTCGTCATTAGCTC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTCAGTATACCGTTaGAAATCTTCAACCTCCACA +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVFSVYR*KSSTST
Trigger: TGTGGAGGTTGAAGATTTCCAACGGTATACTGAAAA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGCAATGAGAGTTTCTTaGAGTATTCCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFAMRVS*SIPLWE
Trigger: CTCCCAGAGCGGAATACTCCAAGAAACTCTCATTGC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCAAGTGTTCAAACTCTTaGCGGCTGTTGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFKCSNS*RLLAVP
Trigger: AGGAACAGCCAACAGCCGCCAAGAGTTTGAACACTT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAAGTGTTCAAACTCTTaGCGGCTGTTGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEKCSNS*RLLAVP
Trigger: AGGAACAGCCAACAGCCGCCAAGAGTTTGAACACTT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTCCGGAACTGCTTCTaGGACGGACTTCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEFRNCF*DGLQMQ
Trigger: TTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGTGATCAATTGGTTTTaGATTCAGGGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLVINWF*IQGSNH
Trigger: GTGGTTGGACCCCTGAATCCAAAACCAATTGATCAC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCCATCAATCACAAAGTaGCGTATGCAGCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEPSITK*RMQPVK
Trigger: CTTCACAGGCTGCATACGCCACTTTGTGATTGATGG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTTTACTGAAGCTCACTaGGTGTCCATCAATCACAAA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFFTEAH*VSINHK
Trigger: TTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGAAAGTTATCTTCCCTaGAAGAAAGGTGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLESYLP*KKGESE
Trigger: CTCAGATTCACCTTTCTTCCAGGGAAGATAACTTTC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTGTGTTGCAGGTATGTaGAGAGCACACTTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLACVAGM*RAHFVF
Trigger: AAAAACAAAGTGTGCTCTCCACATACCTGCAACACA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp TGTCTGAGAAGCAGAGGTGATGGAGGCCCCATTGAGCTGGAGATTGCTGAGACAGAGTTCTCAGACGAATaGAAAACTGAGATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: CLRSRGDGGPIELEIAETEFSDE*KTEIFL
Trigger: TAAAAAGATCTCAGTTTTCCATTCGTCTGAGAACTC...TGTCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCACCTCTGCTTCTCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651529.1
3UTR CAA 72 bp TGGTATTATAACAAACACATGCCCAGAGGCTTTTTATaGGAGAAGGGTAATCCCCTCCCTACAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: WYYNKHMPRGFL*EKGNPLPTEQG
Trigger: GCCTTGCTCTGTAGGGAGGGGATTACCCTTCTCCAATAAAAAGCCTCTGGGCATGTGTTTGTTATAATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521732.5
CDS-3UTR TCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTCTCCCGACAGGGTGTaGAAGAATCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKSPDRV*KNPALH
Trigger: ATGCAATGCTGGATTCTTTCACACCCTGTCGGGAGA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAGTGCACACAGTATCCTaGGCCGTCCAAACACTCGTT +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPVHTVS*AVQTLV
Trigger: AACGAGTGTTTGGACGGCTCAGGATACTGTGTGCAC...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGGGTAGATGGTGGCGTTaGTTTCATTCACGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRGRWWR*FHSRAY
Trigger: ATAGGCACGTGAATGAAATCAACGCCACCATCTACC...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWCSQHC*FVSFLG
Trigger: CCCTAAGAAAGATACAAATCAACAATGCTGAGAACA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCCSQHC*FVSFLG
Trigger: CCCTAAGAAAGATACAAATCAACAATGCTGAGAACA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTGGGTGAAAAATGGTTaGCGGCTTCTAATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLWVKNG*RLLISS
Trigger: TGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATGCTTCCTGGAGATCTaGCAACTTAGCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKECFLEI*QLSIVV
Trigger: GACTACAATGCTAAGTTGTCAGATCTCCAGGAAGCA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTCATTAGCTTCTTGTTaGAGGTCCTGTGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSLASC*RSCAWS
Trigger: TGACCATGCACAGGACCTTCAACAAGAAGCTAATGA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATCATTAGCTTCTTGTTaGAGGTCCTGTGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESLASC*RSCAWS
Trigger: TGACCATGCACAGGACCTTCAACAAGAAGCTAATGA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTACAGCCCGTTCATATCTaGACTGTGCAACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLQPVHI*TVQLPA
Trigger: AGCAGGAAGTTGCACAGTTCAGATATGAACGGGCTG...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGATTTTCATAGACATTTaGTGCATCCAAAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLIFIDI*CIQSLL
Trigger: CAGAAGGCTTTGGATGCATCAAATGTCTATGAAAAT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCAGGTACAGGATAAACTaGTCTGCAGTCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESRYRIN*SAVSVS
Trigger: ACTGACCGAGACTGCAGATCAGTTTATCCTGTACCT...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTCAAAGCGAGTCACCTaGCCAAATTTCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRSKRVT*PNFPLL
Trigger: AAGGAGAGGGAAATTTGGTCAGGTGACTCGCTTTGA...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTTCAAAGCGAGTCACCTaGCCAAATTTCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSISKRVT*PNFPLL
Trigger: AAGGAGAGGGAAATTTGGTCAGGTGACTCGCTTTGA...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAGCACAGGGCCACCGCTaGATCCAAAATCATAGAACA +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLAQGHR*IQNHRT
Trigger: TGTTCTATGATTTTGGATTCAGCGGTGGCCCTGTGC...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTCTGCGAGATATAAGTaGGTCTTCTGGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSARYK*VFWASI
Trigger: TATGGATGCCCAGAAGACTCACTTATATCTCGCAGA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTGCTTATCTACTGACTaGACTTTGATTCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: MKASTRRKSYCSSWLALCCLSTD*TLIPFT
Trigger: TGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGTGAAATTAGCATACTaGGCACTGATTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEVKLAY*ALIGEP
Trigger: TGGCTCACCAATCAGTGCTCAGTATGCTAATTTCAC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAAGCAAGGGGTCACACTaGATGTCTGAGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRSKGSH*MSEKQR
Trigger: CCTCTGCTTCTCAGACATTCAGTGTGACCCCTTGCT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTTAGGTACTCCCCATTaGCACTGTGGCCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNELGTPH*HCGRGP
Trigger: TGGTCCACGGCCACAGTGTCAATGGGGAGTACCTAA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTGCTTGGGTGTAACTaGGGTGGAAAAATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFLLGCN*GGKISD
Trigger: ATCAGAGATTTTTCCACCTCAGTTACACCCAAGCAG...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAACTGCTTGGGTGTAACTaGGGTGGAAAAATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKELLGCN*GGKISD
Trigger: ATCAGAGATTTTTCCACCTCAGTTACACCCAAGCAG...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: TVISPVGIACALNTSKFASCSTR*KLPPEG
Trigger: TCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCAGAAAGAATCCAGCATTaGATTTCTCGGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKAERIQH*ISRPQA
Trigger: CGCCTGCGGCCGAGAAATGCAATGCTGGATTCTTTC...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCTGGCAGAATTGGGGTaGTCCCCTGATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNELAELG*SPDGIS
Trigger: GGAGATTCCATCAGGGGAGCACCCCAATTCTGCCAG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGAATTTTCGTTACAAATaGACCGAACAGCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: DESFHPKEELLFLLAGFVNFRYK*TEQLHF
Trigger: AAAATGGAGCTGTTCGGTGCATTTGTAACGAAAATT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCCTCTACCAGCTGACTTaGGTGGTTAATGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESLYQLT*VVNGVH
Trigger: ATGGACACCATTAACCACGCAAGTCAGCTGGTAGAG...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCGACAGGAAACAGAGTaGGGGTCTCATTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNERQETE*GSHCAA
Trigger: GGCTGCACAATGAGACCCGCACTCTGTTTCCTGTCG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTGCTAGTGTCAGCCACTaGTTCATCACTGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATASVSH*FITARL
Trigger: GAGTCTAGCAGTGATGAAGCAGTGGCTGACACTAGC...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFPSRVH*SVVSRR
Trigger: TCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGG...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRGRNVA*RSLLLN
Trigger: GTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCC...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGGCAGAAACGTTGCTTaGAGGTCGCTTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQGRNVA*RSLLLN
Trigger: GTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCC...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATGCTGGCAGAAACGTTaGTTGCAGGTCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQCWQKR*LQVASA
Trigger: AGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACTCGGATCCTCTGGATaGTGGCAGAAACGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQLGSSG*WQKRCL
Trigger: CAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAG...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNILVLE*TSTADW
Trigger: CCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTAT...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTACAGGATAAACTGATCTaGAGTCTCGGTCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLQDKLI*SLGQFR
Trigger: CCGGAACTGACCGAGACTGCAGATCAGTTTATCCTG...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCTTACTCCCAACTCTaGTTTTATCTACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: NSMKASTRRKSYCSSWLASYSQL*FYLLSV
Trigger: AACTGATAGTAGATAAAAGCAGAGTTGGGAGTAAGA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR GCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTATAGGCGTGCTCTATTaGTCTAGGGCTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIIGVLY*SRAVGK
Trigger: CTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTAT...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKSVMSG*WTGVDA
Trigger: AGCATCAACTCCTGTCCAGCAGCCTGACATGACAGA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRVFGQL*SVMSGC
Trigger: GCAGCCTGACATGACAGAGCACAGCTGCCCAAATAC...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGTGGGCTCTCTGAAATTATAACAAACACATaGCCAGAGGCTTTTTATTGG +
Preference number: 4 (lower is better)
Translates to: LCSGNVVISPFINCGLSEIITNT*PEAFYW
Trigger: CCAATAAAAAGCCTCTGGGCATGTGTTTGTTATAAT...TTCAGAGAGCCCACAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521732.5
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCCGTCCAAACACTCGTTaGAATTGCCATTACAGTCGC +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESRPNTR*NCHYSR
Trigger: GCGACTGTAATGGCAATTCCAACGAGTGTTTGGACG...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAATTTCTTAGGGCGTATTaGTTTTCTCTTTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: VVTEPTVQRQCGHQSLHKFLRAY*FSLSDN
Trigger: ATTGTCAGAAAGAGAAAACCAATACGCCCTAAGAAA...TTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTGGTCAAGTGCTTCCTaGAGATCTGACAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFWSSAS*RSDNLA
Trigger: TGCTAAGTTGTCAGATCTCCAGGAAGCACTTGACCA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTGGTCAATAGCTTCTTaGACTAAATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLWSIAS*TKSWLR
Trigger: CCTCAGCCATGATTTAGTCCAAGAAGCTATTGACCA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAGGATCCTCTGGATGCTaGCAGAAACGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRGSSGC*QKRCLQ
Trigger: CTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCC...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAAGCTCTCGGATCCTCTaGATGCTGGCAGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRSSRIL*MLAETL
Trigger: CAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAAGCTCTCGGATCCTCTaGATGCTGGCAGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQSSRIL*MLAETL
Trigger: CAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTAAGTCATCCATACTaGTTCTCGAGTGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLLSHPY*FSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCACATGGCACTGATGTaGAGGGGTCCATATTATAGA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFHMALM*RGPYYR
Trigger: TCTATAATATGGACCCCTCCACATCAGTGCCATGTG...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCACATGGCACTGATGTaGAGGGGTCCATATTATAGA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEHMALM*RGPYYR
Trigger: TCTATAATATGGACCCCTCCACATCAGTGCCATGTG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTCCTTCTTTTGGAACTaGAAGCCCTTCATGCATCCT +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSFFWN*KPFMHP
Trigger: AGGATGCATGAAGGGCTTCCAGTTCCAAAAGAAGGA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCCTTCTTTTGGAACTaGAAGCCCTTCATGCATCCT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESFFWN*KPFMHP
Trigger: AGGATGCATGAAGGGCTTCCAGTTCCAAAAGAAGGA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCCATTATCCAGTGAGATaGAGAACACGTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESHYPVR*RTRLTL
Trigger: CAGGGTCAGACGTGTTCTCCATCTCACTGGATAATG...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTTTTCAGTATACCGTTaGAAATCTTCAACCTCCACA +
Preference number: 4 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFFSVYR*KSSTST
Trigger: TGTGGAGGTTGAAGATTTCCAACGGTATACTGAAAA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTTTTCAGTATACCGTTaGAAATCTTCAACCTCCACA +
Preference number: 4 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWFSVYR*KSSTST
Trigger: TGTGGAGGTTGAAGATTTCCAACGGTATACTGAAAA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTTTTCAGTATACCGTTaGAAATCTTCAACCTCCACA +
Preference number: 4 (lower is better)
Translates to: VQLDESFHPKEELLFLLAFSVYR*KSSTST
Trigger: TGTGGAGGTTGAAGATTTCCAACGGTATACTGAAAA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTGCAATGAGAGTTTCTTaGAGTATTCCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIAMRVS*SIPLWE
Trigger: CTCCCAGAGCGGAATACTCCAAGAAACTCTCATTGC...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGAGGCCCCATTGAGCTaGAGATTGCTGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMREAPLS*RLLRQP
Trigger: TGGCTGTCTCAGCAATCTCCAGCTCAATGGGGCCTC...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAAGTTCCTGTTTCCATaGGGCCTTCAAAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLKFLFP*GLQSKG
Trigger: CCCCTTGCTTTGAAGGCCCCATGGAAACAGGAACTT...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGCTTATCATGGTGGCTaGCACTTAGTAAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFAYHGG*HLVSPL
Trigger: TAGAGGACTTACTAAGTGCCAGCCACCATGATAAGC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGTTCATGTTGGAGCCCTaGCTTCTCTGGCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQFMLEP*LLWLPE
Trigger: CTCAGGGAGCCAGAGAAGCCAGGGCTCCAACATGAA...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR TCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGTTGCCTGCCAACCGCTaGGCTCCCTTCAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQLPANR*APFNVK
Trigger: TTTGACATTGAAGGGAGCTCAGCGGTTGGCAGGCAA...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR TCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCATCTCCCGACAGGGTGTaGAAGAATCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKASPDRV*KNPALH
Trigger: ATGCAATGCTGGATTCTTTCACACCCTGTCGGGAGA...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR TCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGACGCAACGTTCACACTTaGATCCGGTGGTGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRRNVHT*IRWCCV
Trigger: TACGCAACACCACCGGATTCAAGTGTGAACGTTGCG...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTTGCTTCCTGGAGATCTaGCAACTTAGCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSICFLEI*QLSIVV
Trigger: GACTACAATGCTAAGTTGTCAGATCTCCAGGAAGCA...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTAGGTACAGGATAAACTaGTCTGCAGTCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATRYRIN*SAVSVS
Trigger: ACTGACCGAGACTGCAGATCAGTTTATCCTGTACCT...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTCGGGCACATGGCACTaGTGTGGAGGGGTCCATATT +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDSGTWH*CGGVHI
Trigger: AATATGGACCCCTCCACATCAGTGCCATGTGCCCGA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCATTATCCATGCTCTTaGCATGCCTTCTGTCAACTA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEHYPCS*HAFCQL
Trigger: TAGTTGACAGAAGGCATGTCAAGAGCATGGATAATG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAACATTATCCATGCTCTTaGCATGCCTTCTGTCAACTA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEHYPCS*HAFCQL
Trigger: TAGTTGACAGAAGGCATGTCAAGAGCATGGATAATG...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCTGAGCACTGATTGGTaGGCCACCGAAGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNLSTDW*ATEVKL
Trigger: AAGTTTTACTTCGGTGGCTCACCAATCAGTGCTCAG...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAGCAACAGGATCCCATaGAGGTGCATCTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESNRIP*RCIFTF
Trigger: AAAAGTAAAGATGCACCTTCATGGGATCCTGTTGCT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGAGCAACAGGATCCCATaGAGGTGCATCTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESNRIP*RCIFTF
Trigger: AAAAGTAAAGATGCACCTTCATGGGATCCTGTTGCT...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATTGGAAAGGTGGCAATaGGAGTTTCTTGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKELERWQ*EFLGVF
Trigger: GAATACTCCAAGAAACTCTCATTGCCACCTTTCCAA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCCACATCCAACTaGACCACATTAGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEESTSN*TTLESL
Trigger: TAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCAGGGCTGCTTTACTaGAGCTCACTGGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVPGLLY*SSLGVH
Trigger: ATGGACACCCAGTGAGCTTCAGTAAAGCAGCCCTGG...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPSCSTR*KLPPEG
Trigger: TCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCAAGTCACACAGTATCCTaGGCCGTCCAAACACTCGTT +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKASHTVS*AVQTLV
Trigger: AACGAGTGTTTGGACGGCTCAGGATACTGTGTGACT...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTATAGCAGGATTCTaGAAAATTGGCCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATPIAGF*KIGQVG
Trigger: CCCCACTTGGCCAATTTTGCAGAATCCTGCTATAGG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAATTTTCGTTACAAATaGACCGAACAGCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPNFRYK*TEQLHF
Trigger: AAAATGGAGCTGTTCGGTGCATTTGTAACGAAAATT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTTGTTGAAGGTCCTGTaGATGGTCAATAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFLLKVL*MVNSFL
Trigger: CAAGAAGCTATTGACCATGCACAGGACCTTCAACAA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATTGTTGAAGGTCCTGTaGATGGTCAATAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKELLKVL*MVNSFL
Trigger: CAAGAAGCTATTGACCATGCACAGGACCTTCAACAA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTATCACTGCTAGACTCTaGCTTTGCTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIITARL*LCLQFS
Trigger: AGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGAT...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATACTGGTTCTCGAGTaGACTTCCACAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQILVLE*TSTADW
Trigger: CCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTAT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAACGTATCTTCAAGATaGACAGGGCCACCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKNVSSR*TGPPLN
Trigger: ATTCAGCGGTGGCCCTGTGCATCTTGAAGATACGTT...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCAGACATAGAAGATCATaGCATGGGAGGAACGAGTTC +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESRHRRS*HGRNEF
Trigger: GAACTCGTTCCTCCCATGGCATGATCTTCTATGTCT...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTTGGATTCAGGGACGGACTTCAAATaGAATTTCAAACTTCAATCC +
Preference number: 4 (lower is better)
Translates to: LEHLQQTQAPCDQLVLDSGTDFK*NFKLQS
Trigger: GGATTGAAGTTTGAAATTGCATTTGAAGTCCGTCCC...TGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR GCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCAGGGTTCCGGAACTaGTTCTGGGACGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVPGFRN*FWDGLQ
Trigger: TTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGG...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPSVMSG*WTGVDA
Trigger: AGCATCAACTCCTGTCCAGCAGCCTGACATGACAGA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGGTATTTGGGCAGCTGTaGTCTGTCATGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEVFGQL*SVMSGC
Trigger: GCAGCCTGACATGACAGAGCACAGCTGCCCAAATAC...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTCACCAGTAGGAATTaGGTGTGCTCTCAATACAAG +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEFTSRN*VCSQYK
Trigger: CTTGTATTGAGAGCACACGCAATTCCTACTGGTGAA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGCGTCCAAACACTCGTTaGAATTGCCATTACAGTCGC +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKRPNTR*NCHYSR
Trigger: GCGACTGTAATGGCAATTCCAACGAGTGTTTGGACG...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGACACTGCACAGTTCTTaGCTATCCTGGCGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNETLHSS*LSWRPH
Trigger: ATGGGGACGCCAGGATAGCCAAGAACTGTGCAGTGT...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAATCACAGCTTATGGTTaGGCAGTCCATGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRITAYG*AVHACR
Trigger: CCTACAGGCATGGACTGCCCAACCATAAGCTGTGAT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTCCTGTTGTTTCTCATaGTCCCGCTGCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVSCCFS*SRCLAA
Trigger: AGCAGCCAGGCAGCGGGACCATGAGAAACAACAGGA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTCCTGTTGTTTCTCATaGTCCCGCTGCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPSCCFS*SRCLAA
Trigger: AGCAGCCAGGCAGCGGGACCATGAGAAACAACAGGA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAGTTGGTTAGATTGTTaGCCATGGGGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRSWLDC*PWGQWP
Trigger: AGGCCACTGCCCCCATGGCCAACAATCTAACCAACT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGAACATCATGGAGACTTaGATCTTGCTGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEENIMET*ILLATL
Trigger: AAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTT...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTCACATGGCACTGATGTaGAGGGGTCCATATTATAGA +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIHMALM*RGPYYR
Trigger: TCTATAATATGGACCCCTCCACATCAGTGCCATGTG...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATTGAAGTCCTTCTTTTaGAACTGGAAGCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKELKSFF*NWKPFM
Trigger: CATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAGAGCTAATGACGAAGTaGGACAGCCCATCATTGTAC +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLELMTK*DSPSLY
Trigger: GTACAATGATGGGCTGTCCCACTTCGTCATTAGCTC...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATGGAGTATTCCGCTCTaGGAGTTTCAGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQWSIPL*EFQSNR
Trigger: CCTGTTGCTCTGAAACTCCCAGAGCGGAATACTCCA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATGGAGTATTCCGCTCTaGGAGTTTCAGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPWSIPL*EFQSNR
Trigger: CCTGTTGCTCTGAAACTCCCAGAGCGGAATACTCCA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAAAGTTCCTGTTTCCATaGGGCCTTCAAAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQKFLFP*GLQSKG
Trigger: CCCCTTGCTTTGAAGGCCCCATGGAAACAGGAACTT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAAGGGGTCCAACCACATaGTTCACTTCAGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRRGPTT*FTSEST
Trigger: TGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCATCAATCACAAAGTaGCGTATGCAGCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATPSITK*RMQPVK
Trigger: CTTCACAGGCTGCATACGCCACTTTGTGATTGATGG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCAAAGAAGTGTTCATGTTaGAGCCCTGGCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKAKKCSC*SPGFSG
Trigger: GCCAGAGAAGCCAGGGCTCCAACATGAACACTTCTT...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR TCA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGAAGCCATTTCTCCGCTaGCATCCAGTAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FCILYILWLNGLGQLYQQKPFLR*HPVVLF
Trigger: GAAGAGCACTACTGGATGTCAGCGGAGAAATGGCTT...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR TCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATTCTCCCGACAGGGTGTaGAAGAATCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNSPDRV*KNPALH
Trigger: ATGCAATGCTGGATTCTTTCACACCCTGTCGGGAGA...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTACAGGTGCTTCCAATaGGTAAGGGGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKYRCFQ*VRGFHS
Trigger: ACTATGGAAACCCCTTACTCATTGGAAGCACCTGTA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTCCTACACTGGCCAGTaGCTTCATCACAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNSYTGQ*LHHNLQ
Trigger: TTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTCCTACACTGGCCAGTaGCTTCATCACAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATSYTGQ*LHHNLQ
Trigger: TTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTCCATGCTTTCCTTCTaGACAAGTTGTCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESSMLSF*TSCPFL
Trigger: CAGAAAAGGACAACTTGTTCAGAAGGAAAGCATGGA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGCTTGCTCTACCAGCTaGCTTGCGTGGTTAATGGTG +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVACSTS*LAWLMV
Trigger: CACCATTAACCACGCAAGTCAGCTGGTAGAGCAAGC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTCATTAGCTTCTTGTTaGAGGTCCTGTGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATSLASC*RSCAWS
Trigger: TGACCATGCACAGGACCTTCAACAAGAAGCTAATGA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGCAGTTCTCTGGCTTaGTTGAGGAGGTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRCSSLA*LRRFSL
Trigger: AAGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCA...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTATTCTGGTCTGAGCAATaGGCTCTCGGATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVFWSEQ*ALGSSG
Trigger: TCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAA...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR TCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAATTTCCCTCTCCTTGTaGTGTCTCTCACCACGGCAT +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRISLSL*CLSPRH
Trigger: ATGCCGTGGTGAGAGACATCACAAGGAGAGGGAAAT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCTGCTCCAGTAAATTaGAGTCCTTCTTTTGGAACT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESAPVN*SPSFGT
Trigger: AGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTCTGCGAGATATAAGTaGGTCTTCTGGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNSARYK*VFWASI
Trigger: TATGGATGCCCAGAAGACTCACTTATATCTCGCAGA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEVLLIY*LNFDSL
Trigger: AAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTAC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCACTGAGCACTGATTGGTaGGCCACCGAAGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPLSTDW*ATEVKL
Trigger: AAGTTTTACTTCGGTGGCTCACCAATCAGTGCTCAG...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAGTGAAATTAGCATACTaGGCACTGATTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLVKLAY*ALIGEP
Trigger: TGGCTCACCAATCAGTGCTCAGTATGCTAATTTCAC...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTTTGGAAAGGTGGCAATaGGAGTTTCTTGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSILERWQ*EFLGVF
Trigger: GAATACTCCAAGAAACTCTCATTGCCACCTTTCCAA...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTAAGCAAGGGGTCACACTaGATGTCTGAGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVSKGSH*MSEKQR
Trigger: CCTCTGCTTCTCAGACATTCAGTGTGACCCCTTGCT...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCAGCAAGGGGTCACACTaGATGTCTGAGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVSKGSH*MSEKQR
Trigger: CCTCTGCTTCTCAGACATTCAGTGTGACCCCTTGCT...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCTGCTTGGGTGTAACTaGGGTGGAAAAATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNLLGCN*GGKISD
Trigger: ATCAGAGATTTTTCCACCTCAGTTACACCCAAGCAG...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCGAGTCCACATCCAACTaGACCACATTAGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESESTSN*TTLESL
Trigger: TAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTC...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCACCTGCAAGAACTGACTaGAACACTGGTCATGACAGT +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKAPARTD*NTGHDS
Trigger: ACTGTCATGACCAGTGTTTCAGTCAGTTCTTGCAGG...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGAAAGAATCCAGCATTaGATTTCTCGGCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVERIQH*ISRPQA
Trigger: CGCCTGCGGCCGAGAAATGCAATGCTGGATTCTTTC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAAACACTCGTTGGAATTaGCATTACAGTCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQNTRWN*HYSRRA
Trigger: TGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCAAACACTCGTTGGAATTaGCATTACAGTCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKANTRWN*HYSRRA
Trigger: TGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTT...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAAGACACTTTTCACAGTaGTCTCCTGTTGTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRRHFSQ*SPVVFR
Trigger: GCGGAACACAACAGGAGAGCACTGTGAAAAGTGTCT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGACACTTTTCACAGTaGTCTCCTGTTGTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPRHFSQ*SPVVFR
Trigger: GCGGAACACAACAGGAGAGCACTGTGAAAAGTGTCT...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTGTTGAAGGTCCTGTaGATGGTCAATAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESLLKVL*MVNSFL
Trigger: CAAGAAGCTATTGACCATGCACAGGACCTTCAACAA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGCTAGACTCTGCCTTTaGTTGCAGTTCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNARLCL*LQFSGL
Trigger: CAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCTAGC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATATCACTGCTAGACTCTaGCTTTGCTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNITARL*LCLQFS
Trigger: AGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGAT...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAACGTATCTTCAAGATaGACAGGGCCACCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPNVSSR*TGPPLN
Trigger: ATTCAGCGGTGGCCCTGTGCATCTTGAAGATACGTT...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACCCAGGGTTTCTGTCTaGTCCAGTAAATTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQPRVSV*SSKLKS
Trigger: GGACTTCAATTTACTGGAGCAGACAGAAACCCTGGG...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAATAGGCGTGCTCTATTaGTCTAGGGCTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRIGVLY*SRAVGK
Trigger: CTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTAT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATAGGCGTGCTCTATTaGTCTAGGGCTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQIGVLY*SRAVGK
Trigger: CTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTAT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGGGACGGACTTCAAATaGAATTTCAAACTTCAATCC +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEGTDFK*NFKLQS
Trigger: GGATTGAAGTTTGAAATTGCATTTGAAGTCCGTCCC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGATAACTGTAATTCTGTaGCATCTGCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEITVIL*HLPSQR
Trigger: TCTCTGTGATGGCAGATGGCACAGAATTACAGTTAT...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCATAACTGTAATTCTGTaGCATCTGCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFITVIL*HLPSQR
Trigger: TCTCTGTGATGGCAGATGGCACAGAATTACAGTTAT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTCTGTCATGTCAGGCTaGTGGACAGGAGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNESVMSG*WTGVDA
Trigger: AGCATCAACTCCTGTCCAGCAGCCTGACATGACAGA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCACGTCCAAACACTCGTTaGAATTGCCATTACAGTCGC +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKARPNTR*NCHYSR
Trigger: GCGACTGTAATGGCAATTCCAACGAGTGTTTGGACG...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCTTGTAGTTCACTTTTaGCTCCATCTATTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLLVVHF*LHLFLH
Trigger: ATGCAGAAATAGATGGAGCCAAAAGTGAACTACAAG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTAAGTCATCCATACTaGTTCTCGAGTGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESLSHPY*FSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAAAGGCCGTTGTCAGCTaGTGTTCGAACTTCTATGTC +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRKAVVS*CSNFYV
Trigger: GACATAGAAGTTCGAACACCAGCTGACAACGGCCTT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCACATTATCCAGTGAGATaGAGAACACGTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPHYPVR*RTRLTL
Trigger: CAGGGTCAGACGTGTTCTCCATCTCACTGGATAATG...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGAGCTAATGACGAAGTaGGACAGCCCATCATTGTAC +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQELMTK*DSPSLY
Trigger: GTACAATGATGGGCTGTCCCACTTCGTCATTAGCTC...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAGCAATGAGAGTTTCTTaGAGTATTCCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPAMRVS*SIPLWE
Trigger: CTCCCAGAGCGGAATACTCCAAGAAACTCTCATTGC...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATTCCGGAACTGCTTCTaGGACGGACTTCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPFRNCF*DGLQMQ
Trigger: TTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAGGGGTCCAACCACATaGTTCACTTCAGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRRGPTT*FTSEST
Trigger: TGTGGACTCTGAAGTGAACCATGTGGTTGGACCCCT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGGTGATCAATTGGTTTTaGATTCAGGGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKVINWF*IQGSNH
Trigger: GTGGTTGGACCCCTGAATCCAAAACCAATTGATCAC...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGACTCCCTGTGATCAATTaGTTTTGGATTCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRLPVIN*FWIQGS
Trigger: GGACCCCTGAATCCAAAACCAATTGATCACAGGGAG...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTTTACTGAAGCTCACTaGGTGTCCATCAATCACAAA +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFFTEAH*VSINHK
Trigger: TTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTTACTGAAGCTCACTaGGTGTCCATCAATCACAAA +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEFTEAH*VSINHK
Trigger: TTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTCTCCCGACAGGGTGTaGAAGAATCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPSPDRV*KNPALH
Trigger: ATGCAATGCTGGATTCTTTCACACCCTGTCGGGAGA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGATCAGGTTGGGATCTaGATTTCCACTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNDQVGI*ISTAVT
Trigger: TGTGACTGCAGTGGAAATTCAGATCCCAACCTGATC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTGGGTGAAAAATGGTTaGCGGCTTCTAATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATWVKNG*RLLISS
Trigger: TGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGATTTTCATAGACATTTaGTGCATCCAAAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEIFIDI*CIQSLL
Trigger: CAGAAGGCTTTGGATGCATCAAATGTCTATGAAAAT...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCATTTTCATAGACATTTaGTGCATCCAAAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFIFIDI*CIQSLL
Trigger: CAGAAGGCTTTGGATGCATCAAATGTCTATGAAAAT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR TCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATGCAGTTCTCTGGCTTaGTTGAGGAGGTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRCSSLA*LRRFSL
Trigger: AAGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCATTATCCATGCTCTTaGCATGCCTTCTGTCAACTA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATHYPCS*HAFCQL
Trigger: TAGTTGACAGAAGGCATGTCAAGAGCATGGATAATG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATGCTTATCTACTGACTaGACTTTGATTCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKECLSTD*TLIPFT
Trigger: TGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTTCATATCTTGTGGGTaGGACAGAGCTAATGACGAA +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNFISCG*DRANDE
Trigger: TTCGTCATTAGCTCTGTCTCACCCACAAGATATGAA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCTGAGCACTGATTGGTaGGCCACCGAAGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNELSTDW*ATEVKL
Trigger: AAGTTTTACTTCGGTGGCTCACCAATCAGTGCTCAG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGGAGAAACAATGGTaGAGACTCAATGGGACACTC +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNEEKQW*RLNGTL
Trigger: GAGTGTCCCATTGAGTCTTCACCATTGTTTCTCCTC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATAGCAACAGGATCCCATaGAGGTGCATCTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNSNRIP*RCIFTF
Trigger: AAAAGTAAAGATGCACCTTCATGGGATCCTGTTGCT...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGAGACGAATGGAAAACTaGGATTTGGCACCAAAATCT +
Preference number: 4 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRRRMEN*DLAPKS
Trigger: AGATTTTGGTGCCAAATCTCAGTTTTCCATTCGTCT...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGACTGCTTGGGTGTAACTaGGGTGGAAAAATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRLLGCN*GGKISD
Trigger: ATCAGAGATTTTTCCACCTCAGTTACACCCAAGCAG...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATGAGTCCACATCCAACTaGACCACATTAGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNESTSN*TTLESL
Trigger: TAGAGATTCTAATGTGGTTCAGTTGGATGTGGACTC...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTCCTGTTCAACTCGATaGAAGCTTCCACCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVSCSTR*KLPPEG
Trigger: TCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAACACTCGTTGGAATTaGCATTACAGTCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRNTRWN*HYSRRA
Trigger: TGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAGACACTTTTCACAGTaGTCTCCTGTTGTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRRHFSQ*SPVVFR
Trigger: GCGGAACACAACAGGAGAGCACTGTGAAAAGTGTCT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATCCTATAGCAGGATTCTaGAAAATTGGCCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNPIAGF*KIGQVG
Trigger: CCCCACTTGGCCAATTTTGCAGAATCCTGCTATAGG...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTAGCTAGTGTCAGCCACTaGTTCATCACTGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVASVSH*FITARL
Trigger: GAGTCTAGCAGTGATGAAGCAGTGGCTGACACTAGC...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGACCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRPSRVH*SVVSRR
Trigger: TCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGG...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCACCTAGCAGAGTTCACTaGAGTGTTGTAAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPPSRVH*SVVSRR
Trigger: TCTTCTGCTTACAACACTGCAGTGAACTCTGCTAGG...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCAGGATAAACTGATCTaGAGTCTCGGTCAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVQDKLI*SLGQFR
Trigger: CCGGAACTGACCGAGACTGCAGATCAGTTTATCCTG...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATCCATGCTCTTGACATaGCTTCTGTCAACTACCAAG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRSMLLT*LLSTTK
Trigger: CTTGGTAGTTGACAGAAGGCATGTCAAGAGCATGGA...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCCCAGGGTTTCTGTCTaGTCCAGTAAATTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEPRVSV*SSKLKS
Trigger: GGACTTCAATTTACTGGAGCAGACAGAAACCCTGGG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTCTTACTCCCAACTCTaGTTTTATCTACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: RLSPVQLDESFHPKEELLSYSQL*FYLLSV
Trigger: AACTGATAGTAGATAAAAGCAGAGTTGGGAGTAAGA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCAATTGTTGTCCATTaGAGACACTTTGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESIVVH*RHFGFK
Trigger: CTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTTCACCAGTAGGAATTaGGTGTGCTCTCAATACAAG +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKFTSRN*VCSQYK
Trigger: CTTGTATTGAGAGCACACGCAATTCCTACTGGTGAA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCACCGTTGGGTGAAAAATaGTTGACGGCTTCTAATCTC +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPPLGEK*LTASNL
Trigger: GAGATTAGAAGCCGTCAACCATTTTTCACCCAACGG...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATCTTGGACTAAATCATaGCTGAGGTTACTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESWTKS*LRLLRL
Trigger: TAACCTAAGTAACCTCAGCCATGATTTAGTCCAAGA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGATTCTGTGACCAGTTaGTTAGATTGTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQDSVTS*LDCWPW
Trigger: CCATGGCCAACAATCTAACCAACTGGTCACAGAATC...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTAACATCATGGAGACTTaGATCTTGCTGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATNIMET*ILLATL
Trigger: AAGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTT...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAGGCCGTTGTCAGCTaGTGTTCGAACTTCTATGTC +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEKAVVS*CSNFYV
Trigger: GACATAGAAGTTCGAACACCAGCTGACAACGGCCTT...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTATTGAAGTCCTTCTTTTaGAACTGGAAGCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLLKSFF*NWKPFM
Trigger: CATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAA...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTTGAAGTCCTTCTTTTaGAACTGGAAGCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: TVISPVGIACALNTSKFALKSFF*NWKPFM
Trigger: CATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATTTTCAGTATACCGTTaGAAATCTTCAACCTCCACA +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEFSVYR*KSSTST
Trigger: TGTGGAGGTTGAAGATTTCCAACGGTATACTGAAAA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTGGAGTATTCCGCTCTaGGAGTTTCAGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDWSIPL*EFQSNR
Trigger: CCTGTTGCTCTGAAACTCCCAGAGCGGAATACTCCA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAACTCTTGGCGGCTGTTaGCTGTTCCTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRTLGGC*LFLHID
Trigger: ATCAATATGGAGGAACAGCCAACAGCCGCCAAGAGT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAAGTGTTCAAACTCTTaGCGGCTGTTGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRKCSNS*RLLAVP
Trigger: AGGAACAGCCAACAGCCGCCAAGAGTTTGAACACTT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTAAGTTCCTGTTTCCATaGGGCCTTCAAAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPKFLFP*GLQSKG
Trigger: CCCCTTGCTTTGAAGGCCCCATGGAAACAGGAACTT...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATTCCGGAACTGCTTCTaGGACGGACTTCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRFRNCF*DGLQMQ
Trigger: TTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCCATCAATCACAAAGTaGCGTATGCAGCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEPSITK*RMQPVK
Trigger: CTTCACAGGCTGCATACGCCACTTTGTGATTGATGG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTTTTACTGAAGCTCACTaGGTGTCCATCAATCACAAA +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIFTEAH*VSINHK
Trigger: TTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAA...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTTACTGAAGCTCACTaGGTGTCCATCAATCACAAA +
Preference number: 4 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESFTEAH*VSINHK
Trigger: TTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTAC +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPVMSGC*TGVDAY
Trigger: GTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATGTCATGTCAGGCTGCTaGACAGGAGTTGATGCTTAC +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDVMSGC*TGVDAY
Trigger: GTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATACAGGTGCTTCCAATaGGTAAGGGGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRYRCFQ*VRGFHS
Trigger: ACTATGGAAACCCCTTACTCATTGGAAGCACCTGTA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGGTAGATGGTGGCGTTaGTTTCATTCACGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPGRWWR*FHSRAY
Trigger: ATAGGCACGTGAATGAAATCAACGCCACCATCTACC...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGGTAGATGGTGGCGTTaGTTTCATTCACGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVGRWWR*FHSRAY
Trigger: ATAGGCACGTGAATGAAATCAACGCCACCATCTACC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTGCAGTTCTCTGGCTTaGTTGAGGAGGTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDCSSLA*LRRFSL
Trigger: AAGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTCAAAGCGAGTCACCTaGCCAAATTTCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPSKRVT*PNFPLL
Trigger: AAGGAGAGGGAAATTTGGTCAGGTGACTCGCTTTGA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACATTATCCATGCTCTTaGCATGCCTTCTGTCAACTA +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQHYPCS*HAFCQL
Trigger: TAGTTGACAGAAGGCATGTCAAGAGCATGGATAATG...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTCTGCTCCAGTAAATTaGAGTCCTTCTTTTGGAACT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNSAPVN*SPSFGT
Trigger: AGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLVLLIY*LNFDSL
Trigger: AAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTAC...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKVLLIY*LNFDSL
Trigger: AAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTAC...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGTGAAATTAGCATACTaGGCACTGATTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRVKLAY*ALIGEP
Trigger: TGGCTCACCAATCAGTGCTCAGTATGCTAATTTCAC...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAAGCAACAGGATCCCATaGAGGTGCATCTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRSNRIP*RCIFTF
Trigger: AAAAGTAAAGATGCACCTTCATGGGATCCTGTTGCT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATAGACGAATGGAAAACTaGGATTTGGCACCAAAATCT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNRRMEN*DLAPKS
Trigger: AGATTTTGGTGCCAAATCTCAGTTTTCCATTCGTCT...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGACGAATGGAAAACTaGGATTTGGCACCAAAATCT +
Preference number: 4 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLRRMEN*DLAPKS
Trigger: AGATTTTGGTGCCAAATCTCAGTTTTCCATTCGTCT...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGAATTTTCGTTACAAATaGACCGAACAGCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEENFRYK*TEQLHF
Trigger: AAAATGGAGCTGTTCGGTGCATTTGTAACGAAAATT...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR GCA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTTTCATATCTGAACTGTaGAACTTCCTGCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: PVGIACALNTSKFATPSIFISEL*NFLLNS
Trigger: TGAATTGAGCAGGAAGTTGCACAGTTCAGATATGAA...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATCTGCTGCTTGTAGTTaGTTAACGGCATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRSAACS*LTASLS
Trigger: ACTCAGTGATGCCGTTAAGCAACTACAAGCAGCAGA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATTCTGCTGCTTGTAGTTaGTTAACGGCATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNSAACS*LTASLS
Trigger: ACTCAGTGATGCCGTTAAGCAACTACAAGCAGCAGA...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTCTGCTGCTTGTAGTTaGTTAACGGCATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNESAACS*LTASLS
Trigger: ACTCAGTGATGCCGTTAAGCAACTACAAGCAGCAGA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCACTTTTCCTCTGCTGTaGTACTTAGACTCGGGACTG +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVTFPLL*YLDSGL
Trigger: CAGTCCCGAGTCTAAGTAGCACAGCAGAGGAAAAGT...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTACTTTTCCTCTGCTGTaGTACTTAGACTCGGGACTG +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPTFPLL*YLDSGL
Trigger: CAGTCCCGAGTCTAAGTAGCACAGCAGAGGAAAAGT...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATAACGTATCTTCAAGATaGACAGGGCCACCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDNVSSR*TGPPLN
Trigger: ATTCAGCGGTGGCCCTGTGCATCTTGAAGATACGTT...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATCCATGCTCTTGACATaGCTTCTGTCAACTACCAAG +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRSMLLT*LLSTTK
Trigger: CTTGGTAGTTGACAGAAGGCATGTCAAGAGCATGGA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR GCA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATCTTACTCCCAACTCTaGTTTTATCTACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESYSQL*FYLLSV
Trigger: AACTGATAGTAGATAAAAGCAGAGTTGGGAGTAAGA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR GCA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCTTACTCCCAACTCTaGTTTTATCTACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESYSQL*FYLLSV
Trigger: AACTGATAGTAGATAAAAGCAGAGTTGGGAGTAAGA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS-3UTR CCA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTTTCTTAGGGCGTATTaGTTTTCTCTTTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LSPVQLDESFHPKEELLFFLRAY*FSLSDN
Trigger: ATTGTCAGAAAGAGAAAACCAATACGCCCTAAGAAA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCACATGGCACTGATGTaGAGGGGTCCATATTATAGA +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEHMALM*RGPYYR
Trigger: TCTATAATATGGACCCCTCCACATCAGTGCCATGTG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGACACATGGCACTGATGTaGAGGGGTCCATATTATAGA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRHMALM*RGPYYR
Trigger: TCTATAATATGGACCCCTCCACATCAGTGCCATGTG...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATCATTATCCAGTGAGATaGAGAACACGTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDHYPVR*RTRLTL
Trigger: CAGGGTCAGACGTGTTCTCCATCTCACTGGATAATG...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCAAGTGTTCAAACTCTTaGCGGCTGTTGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVKCSNS*RLLAVP
Trigger: AGGAACAGCCAACAGCCGCCAAGAGTTTGAACACTT...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTTCCGGAACTGCTTCTaGGACGGACTTCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDFRNCF*DGLQMQ
Trigger: TTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTCTCCCTGTGATCAATTaGTTTTGGATTCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPLPVIN*FWIQGS
Trigger: GGACCCCTGAATCCAAAACCAATTGATCACAGGGAG...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTTTACTGAAGCTCACTaGGTGTCCATCAATCACAAA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATFTEAH*VSINHK
Trigger: TTTGTGATTGATGGACACCCAGTGAGCTTCAGTAAA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATATTTTCATAGACATTTaGTGCATCCAAAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNIFIDI*CIQSLL
Trigger: CAGAAGGCTTTGGATGCATCAAATGTCTATGAAAAT...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGTTCTCTGGCTTGATTaGGGAGGTTCTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVVLWLD*GGSHFH
Trigger: ATGAAAGTGAGAACCTCCTCAATCAAGCCAGAGAAC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTGCTTATCTACTGACTaGACTTTGATTCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: TVISPVGIACALNTSKFACLSTD*TLIPFT
Trigger: TGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CCTACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGTTCATATCTTGTGGGTaGGACAGAGCTAATGACGAA +
Preference number: 4 (lower is better)
Translates to: PTVFAVISSMIPIEHTIMFISCG*DRANDE
Trigger: TTCGTCATTAGCTCTGTCTCACCCACAAGATATGAA...CATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR GCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTTCATATCTGAACTGTaGAACTTCCTGCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATFISEL*NFLLNS
Trigger: TGAATTGAGCAGGAAGTTGCACAGTTCAGATATGAA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTATCACTGCTAGACTCTaGCTTTGCTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPITARL*LCLQFS
Trigger: AGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGAT...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTATCTGCTGCTTGTAGTTaGTTAACGGCATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVSAACS*LTASLS
Trigger: ACTCAGTGATGCCGTTAAGCAACTACAAGCAGCAGA...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR GCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCAGACATAGAAGATCATaGCATGGGAGGAACGAGTTC +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVRHRRS*HGRNEF
Trigger: GAACTCGTTCCTCCCATGGCATGATCTTCTATGTCT...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATTCACCAGTAGGAATTaGGTGTGCTCTCAATACAAG +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRFTSRN*VCSQYK
Trigger: CTTGTATTGAGAGCACACGCAATTCCTACTGGTGAA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATTAAGTCATCCATACTaGTTCTCGAGTGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRLSHPY*FSSALP
Trigger: TGGAAGTGCACTCGAGAACCAGTATGGATGACTTAA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTCCTTCTTTTGGAACTaGAAGCCCTTCATGCATCCT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVSFFWN*KPFMHP
Trigger: AGGATGCATGAAGGGCTTCCAGTTCCAAAAGAAGGA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTTTTCAGTATACCGTTaGAAATCTTCAACCTCCACA +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNFSVYR*KSSTST
Trigger: TGTGGAGGTTGAAGATTTCCAACGGTATACTGAAAA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGAAAGTTATCTTCCCTaGAAGAAAGGTGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQESYLP*KKGESE
Trigger: CTCAGATTCACCTTTCTTCCAGGGAAGATAACTTTC...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTGGGTGAAAAATGGTTaGCGGCTTCTAATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDWVKNG*RLLISS
Trigger: TGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR TCA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATCATTATCCATGCTCTTaGCATGCCTTCTGTCAACTA +
Preference number: 4 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDHYPCS*HAFCQL
Trigger: TAGTTGACAGAAGGCATGTCAAGAGCATGGATAATG...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATGCTTATCTACTGACTaGACTTTGATTCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQCLSTD*TLIPFT
Trigger: TGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTTCATATCTTGTGGGTaGGACAGAGCTAATGACGAA +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVFISCG*DRANDE
Trigger: TTCGTCATTAGCTCTGTCTCACCCACAAGATATGAA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR TCA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTATTGGAAAGGTGGCAATaGGAGTTTCTTGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVLERWQ*EFLGVF
Trigger: GAATACTCCAAGAAACTCTCATTGCCACCTTTCCAA...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATTCATATCTGAACTGTaGAACTTCCTGCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQFISEL*NFLLNS
Trigger: TGAATTGAGCAGGAAGTTGCACAGTTCAGATATGAA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTCTTACTCCCAACTCTaGTTTTATCTACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNSYSQL*FYLLSV
Trigger: AACTGATAGTAGATAAAAGCAGAGTTGGGAGTAAGA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
CDS-3UTR GCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGGGACGGACTTCAAATaGAATTTCAAACTTCAATCC +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRGTDFK*NFKLQS
Trigger: GGATTGAAGTTTGAAATTGCATTTGAAGTCCGTCCC...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATCAATTGTTGTCCATTaGAGACACTTTGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRSIVVH*RHFGFK
Trigger: CTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTTCACCAGTAGGAATTaGGTGTGCTCTCAATACAAG +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPFTSRN*VCSQYK
Trigger: CTTGTATTGAGAGCACACGCAATTCCTACTGGTGAA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCTTCAAAGATCAGGTTaGGATCTGAATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVLQRSG*DLNFHC
Trigger: GCAGTGGAAATTCAGATCCCAACCTGATCTTTGAAG...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTTTTCTTAGGGCGTATTaGTTTTCTCTTTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: VISPVGIACALNTSKFATFLRAY*FSLSDN
Trigger: ATTGTCAGAAAGAGAAAACCAATACGCCCTAAGAAA...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATCTTGGACTAAATCATaGCTGAGGTTACTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRSWTKS*LRLLRL
Trigger: TAACCTAAGTAACCTCAGCCATGATTTAGTCCAAGA...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATCTTGGACTAAATCATaGCTGAGGTTACTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPSWTKS*LRLLRL
Trigger: TAACCTAAGTAACCTCAGCCATGATTTAGTCCAAGA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAAGAACTTTGTATTTaGGCAGCTGTGCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEKELCI*AAVLCH
Trigger: ATGACAGAGCACAGCTGCCCAAATACAAAGTTCTTT...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTTTAGCTTATCATGGTaGCTGGCACTTAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVFSLSW*LALSKS
Trigger: GGACTTACTAAGTGCCAGCCACCATGATAAGCTAAA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCAATACTCTATATTTTGTaGCTGAATGGCTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LKVNKADTEVLYAFKIKAILYIL*LNGLGQ
Trigger: CTGACCTAAGCCATTCAGCCACAAAATATAGAGTAT...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
3UTR CAA 72 bp TTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTaGGATTCAAGGTTAAGAATCCAAATGAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: LPLLQLLSIADT*DSRLRIQMRNK
Trigger: CTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTCTGCTCCAGTAAATTaGAGTCCTTCTTTTGGAACT +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPSAPVN*SPSFGT
Trigger: AGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR TCA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATGCTTATCTACTGACTaGACTTTGATTCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRCLSTD*TLIPFT
Trigger: TGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR TCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVVLLIY*LNFDSL
Trigger: AAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTAC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTCAATTGTTGTCCATTaGAGACACTTTGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNESIVVH*RHFGFK
Trigger: CTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR GCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATTGTCCTACTGTTTTTaGTGTGATATCCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQLSYCF*CDILND
Trigger: ATCATTGAGGATATCACAGCAAAAACAGTAGGACAA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CCA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATTTCTTAGGGCGTATTaGTTTTCTCTTTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQFLRAY*FSLSDN
Trigger: ATTGTCAGAAAGAGAAAACCAATACGCCCTAAGAAA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCTTGTAGTTCACTTTTaGCTCCATCTATTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNELVVHF*LHLFLH
Trigger: ATGCAGAAATAGATGGAGCCAAAAGTGAACTACAAG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTCTTGGACTAAATCATaGCTGAGGTTACTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNESWTKS*LRLLRL
Trigger: TAACCTAAGTAACCTCAGCCATGATTTAGTCCAAGA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR GCA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTAATTTTCGTTACAAATaGACCGAACAGCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPNFRYK*TEQLHF
Trigger: AAAATGGAGCTGTTCGGTGCATTTGTAACGAAAATT...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CCA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTTTCTTAGGGCGTATTaGTTTTCTCTTTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVFLRAY*FSLSDN
Trigger: ATTGTCAGAAAGAGAAAACCAATACGCCCTAAGAAA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS GCA 90 bp AGAGAGAGAGAAGGACGAGTGTGGCACAGCCCGCGGGGGCGCAGGTaGCCCAGCAGGGTGGCAATGGCAGGGACACTGTACCTCGGCCGC +
Preference number: 5 (lower is better)
Translates to: REREGRVWHSPRGRR*PSRVAMAGTLYLGR
Trigger: GCGGCCGAGGTACAGTGTCCCTGCCATTGCCACCCTGCTGGGGCACCTGCGCCCCCGCGGGCTGTGCCACACTCGTCCTTCTCTCTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368638.5
ENST00000453937.2
ENST00000455073.1
CDS GCA 90 bp CCGCGTGGTGCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGAGATGGACGGAG +
Preference number: 5 (lower is better)
Translates to: PRGAAVPRLFSLLSV*SIPRWLRNQQRWTE
Trigger: CTCCGTCCATCTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453937.2
ENST00000522006.5
CDS GCA 90 bp CCGCGTGGTGCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGAGTACGGCATCA +
Preference number: 5 (lower is better)
Translates to: PRGAAVPRLFSLLSV*SIPRWLRNQQSTAS
Trigger: TGATGCCGTACTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000368638.5
ENST00000389463.9
ENST00000431543.6
CDS GCA 90 bp CCGCGTGGTGCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGCTTCTACTCCCA +
Preference number: 5 (lower is better)
Translates to: PRGAAVPRLFSLLSV*SIPRWLRNQQLLLP
Trigger: TGGGAGTAGAAGCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455073.1
ENST00000519932.5
CDS CCA 90 bp CGGCCCCAGAGGATACGCTCAGCACCCCGGATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCAGGTCATCAGTCAGGTCCCAGACGC +
Preference number: 5 (lower is better)
Translates to: RPQRIRSAPRICLPR*RALLTAGHQSGPRR
Trigger: GCGTCTGGGACCTGACTGATGACCTGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAGCGTATCCTCTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS TCA 90 bp GAGGCAGAACCGAGCGCCAGGCTGAGCTCAAAGCCATTTCTCCGCTaGCATCCAGTAGTGCTCTTCCAGGGCTCGGGCGCTGTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: EAEPSARLSSKPFLR*HPVVLFQGSGAVGL
Trigger: GAGACCCACAGCGCCCGAGCCCTGGAAGAGCACTACTGGATGTCAGCGGAGAAATGGCTTTGAGCTCAGCCTGGCGCTCGGTTCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230538.12
ENST00000243219.7
ENST00000368638.5
ENST00000389463.9
ENST00000424408.6
ENST00000431543.6
ENST00000453937.2
ENST00000455073.1
ENST00000519932.5
ENST00000521398.5
ENST00000521690.1
ENST00000522006.5
CDS GCA 90 bp GCCTATGAGCGGCGGCCCCAGAGGATACGCTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCGCTGCTAACCGCAGGTCATCAGTCA +
Preference number: 5 (lower is better)
Translates to: AYERRPQRIRSAPRI*LPRWRALLTAGHQS
Trigger: TGACTGATGACCTGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAGCGTATCCTCTGGGGCCGCCGCTCATAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS-3UTR CAA 90 bp ATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGGGGCCTCCCCCGCAGTaGCACACTGCACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: IPSLQSKAPVVTEPTVQRGPPPQ*HTAQFL
Trigger: CAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCCC...CCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS GCA 90 bp CCGCGTGGTGCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGTTTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PRGAAVPRLFSLLSV*SIPRWLRNQQFFSF
Trigger: GAAGGAGAAAAACTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243219.7
CDS-3UTR CAA 90 bp ATCCCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCTCAGCACCCCGGATTaGCCTTCCTCGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: IPSLQSKAPVVTEPTVQRLSTPD*PSSMES
Trigger: GCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAG...CCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp CCCTCCCTACAGAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAACTCAGCACCCCGGATTaGCCTTCCTCGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: PSLQSKAPVVTEPTVQRQLSTPD*PSSMES
Trigger: GCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAG...TTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTCTGTAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp GCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGTGACCAGTTGGTTAGATaGTTGGCCATGGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: AVACCTSIVVLLASSVISDQLVR*LAMGAV
Trigger: CACTGCCCCCATGGCCAACAATCTAACCAACTGGTC...ACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS GCA 90 bp CCGCGTGGTGCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGATAGATATTTTA +
Preference number: 5 (lower is better)
Translates to: PRGAAVPRLFSLLSV*SIPRWLRNQQIDIL
Trigger: TAAAATATCTATCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGCACCACGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS GCA 90 bp ACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCATCCCCTAATCCTTCCTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: TSIVVLLASSVISLD*PRRCWASPNPSLKV
Trigger: AACCTTCAAGGAAGGATTAGGGGATGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp GTTAGATTGTTGGCCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: VRLLAMGAVACCTSIVVLWQKRC*QVASAQ
Trigger: TTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCA...CAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGGCCAACAATCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp GTCATGTCAGGCTGCTGGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: VMSGCWTGVDAYGAADQGSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...GCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS TCA 90 bp GAATTGCCATTACAGTCGCAGGGCACACATTCTCCCGACAGGGTGTaGAAGAATCCAGCATTGCATTTCTCGGCCGCAGGCGGCAGGCGT +
Preference number: 5 (lower is better)
Translates to: ELPLQSQGTHSPDRV*KNPALHFSAAGGRR
Trigger: ACGCCTGCCGCCTGCGGCCGAGAAATGCAATGCTGGATTCTTTCACACCCTGTCGGGAGAATGTGTGCCCTGCGACTGTAATGGCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000243219.7
ENST00000389463.9
ENST00000424408.6
ENST00000431543.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
CDS CCA 90 bp TCCGCTGGCAGTGCACACAGTATCCTGAGCCGTCCAAACACTCGTTaGAATTGCCATTACAGTCGCAGGGCACACATTCTCCCGACAGGG +
Preference number: 5 (lower is better)
Translates to: SAGSAHSILSRPNTR*NCHYSRRAHILPTG
Trigger: CCCTGTCGGGAGAATGTGTGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTTGGACGGCTCAGGATACTGTGTGCACTGCCAGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000423735.2
ENST00000424408.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGGGCCTCCCCCGCAGTaGCACACTGCACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAGPPPQ*HTAQFL
Trigger: CAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCCC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAAGGGCCTCCCCCGCAGTaGCACACTGCACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VVTEPTVQRQCGHQSLHKGPPPQ*HTAQFL
Trigger: CAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCCC...TTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTAGAGTGCGGGTCTCATaGTGCAGCCGCTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLARVRVS*CSRCQL
Trigger: GAGCTGGCAGCGGCTGCACAATGAGACCCGCACTCT...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGCAGTTGGTTAGATTGTaGGCCATGGGGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LSNELSDPLDAGRNVACRQLVRL*AMGAVA
Trigger: GGCCACTGCCCCCATGGCCAACAATCTAACCAACTG...CCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS GCA 90 bp ATTGATGGTGAGTGTCCGCTGTACCTCATGGTCCCGCTGCCTGGCTaGTGTGGCCCTGTTCATGTCTTCGGCATCCCTGACATAGTTAAG +
Preference number: 5 (lower is better)
Translates to: IDGECPLYLMVPLPG*CGPVHVFGIPDIVK
Trigger: CTTAACTATGTCAGGGATGCCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGGTACAGCGGACACTCACCATCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS-3UTR CAA 90 bp CCATGGGGGCAGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGACTTGTAGTTCACTTTaGGCTCCATCTATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PWGQWPAAPPSSSCWLPRTCSSL*APSISA
Trigger: TGCAGAAATAGATGGAGCCAAAAGTGAACTACAAGT...CCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACTGCCCCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGCAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLQPVKG*LGAKRG
Trigger: ACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTG...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWQPVKG*LGAKRG
Trigger: ACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTG...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS GCA 90 bp GGCAGTGCACACAGTATCCTGAGCCGTCCAAACACTCGTTGGAATTaGCATTACAGTCGCAGGGCACACATTCTCCCGACAGGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: GSAHSILSRPNTRWN*HYSRRAHILPTGCE
Trigger: TTCACACCCTGTCGGGAGAATGTGTGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTTGGACGGCTCAGGATACTGTGTGCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS CCA 90 bp AGGTGGCTGCGCAACCAGCAGTTTTTCTCCTTCCCGCAGAGGTTCTaGCTCAAGAACCTACAGATGGACGGAGCTTACAGTACGGCATCA +
Preference number: 5 (lower is better)
Translates to: RWLRNQQFFSFPQRF*LKNLQMDGAYSTAS
Trigger: TGATGCCGTACTGTAAGCTCCGTCCATCTGTAGGTTCTTGAGCCAGAACCTCTGCGGGAAGGAGAAAAACTGCTGGTTGCGCAGCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243219.7
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCAGTTGGTTAGATTGTaGGCCATGGGGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAQLVRL*AMGAVA
Trigger: GGCCACTGCCCCCATGGCCAACAATCTAACCAACTG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCGACCAGTTGGTTAGATaGTTGGCCATGGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: QLDESFHPKEELLFLLAGDQLVR*LAMGAV
Trigger: CACTGCCCCCATGGCCAACAATCTAACCAACTGGTC...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCATGGAGACTTGGATCTaGCTGGCAACACTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LSDPLDAGRNVACRSLLLMETWI*LATLLV
Trigger: GACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT...GAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCAGGAACTGACGGGCTaGGAGTCCAGGGGAATCTCC +
Preference number: 5 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPQELTG*ESRGIS
Trigger: GGAGATTCCCCTGGACTCCAAGCCCGTCAGTTCCTG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS TCA 90 bp GGGAATCAAGTGGACCACCAAGTACTTGGTGCAGGCTCCATTTGCTaGGGTGCAGAAAGGGTTAAGTCCAGGGGTGGGACTCAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: GNQVDHQVLGAGSIC*GAERVKSRGGTQQF
Trigger: AAACTGCTGAGTCCCACCCCTGGACTTAACCCTTTCTGCACCTCAGCAAATGGAGCCTGCACCAAGTACTTGGTGGTCCACTTGATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518842.1
CDS GCA 90 bp TCAACAGCCCCTTCTTGGTGTACCATCACACTGCTGATGCTGAAATaGATTGATGGTGAGTGTCCGCTGTACCTCATGGTCCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: STAPSWCTITLLMLK*IDGECPLYLMVPLP
Trigger: AGGCAGCGGGACCATGAGGTACAGCGGACACTCACCATCAATGCATTTCAGCATCAGCAGTGTGATGGTACACCAAGAAGGGGCTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGCGCAACGTTCACACTaGAATCCGGTGGTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAAQRSH*NPVVLR
Trigger: ACGCAACACCACCGGATTCAAGTGTGAACGTTGCGC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGTGGGCTCTCTGAAGCGCAACGTTCACACTaGAATCCGGTGGTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: LCSGNVVISPFINCGLSEAQRSH*NPVVLR
Trigger: ACGCAACACCACCGGATTCAAGTGTGAACGTTGCGC...TTCAGAGAGCCCACAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCCTCATATCATGGGCTaGCTCTACCAGCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: QLDESFHPKEELLFLLAGPHIMG*LYQLTC
Trigger: GCAAGTCAGCTGGTAGAGCAAGCCCATGATATGAGG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAGAGTGCGGGTCTCATaGTGCAGCCGCTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLRVRVS*CSRCQL
Trigger: GAGCTGGCAGCGGCTGCACAATGAGACCCGCACTCT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGCAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGGTTTCATGTACAGGCTCATTCATTAGCTTCTTGTaGAAGGTCCTGTGCATGGTC +
Preference number: 5 (lower is better)
Translates to: LQSRSVPAASQGVSCTGSFISFL*KVLCMV
Trigger: GACCATGCACAGGACCTTCAACAAGAAGCTAATGAA...TGAGCCTGTACATGAAACCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp AGTGGCCTGCTGCACCTCCATCGTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTAGATTCTGTGACCAGTaGGTTAGATTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: SGLLHLHRRPVGFLGDQSRFCDQ*VRLLAM
Trigger: CATGGCCAACAATCTAACCAACTGGTCACAGAATCT...AGACTGATCACCGAGGAAGCCAACAGGACGACGATGGAGGTGCAGCAGGCCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGATGCTGGCAGAAACGTaGCTTGCAGGTCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: DESFHPKEELLFLLAGFVMLAET*LAGRFC
Trigger: GCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCAT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGTGATGGAGGCCCCATaGAGCTGGAGATTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: DESFHPKEELLFLLAGFVVMEAP*SWRLLR
Trigger: TCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCAC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLQPVKG*LGAKRG
Trigger: ACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGCTGCTGGACAGGAGTaGATGCTTACGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLAAGQE*MLTAPL
Trigger: CAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 90 bp TCATCTGCCTCCTCATCCACGAGCTCCCGTTGGGTGAAAAATGGTTaGCGGCTTCTAATCTCTTCAAGCATCTTCTGGGCCAACACCAGC +
Preference number: 5 (lower is better)
Translates to: SSASSSTSSRWVKNG*RLLISSSIFWANTS
Trigger: GCTGGTGTTGGCCCAGAAGATGCTTGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCGTGGATGAGGAGGCAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS TCA 90 bp GCTACAAGAAGTGTTCATGTTGGAGCCCTGGCTTCTCTGGCTCCCTaGGAGCTGAGAATGAACGATAGGGCAGAAGCTGAAAAACCTGGG +
Preference number: 5 (lower is better)
Translates to: ATRSVHVGALASLAP*ELRMNDRAEAEKPG
Trigger: CCCAGGTTTTTCAGCTTCTGCCCTATCGTTCATTCTCAGCTCTCAGGGAGCCAGAGAAGCCAGGGCTCCAACATGAACACTTCTTGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS TCA 90 bp GGTGGAAAAGGGATTCCAGGGCAGGAACCAAAGGTAGATGATCTCTaGAGGCAGAGGGTCAGGGTGCCCACTTTCTTGAGCAAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GGKGIPGQEPKVDDL*RQRVRVPTFLSKVS
Trigger: AGAAACCTTGCTCAAGAAAGTGGGCACCCTGACCCTCTGCCTTCAGAGATCATCTACCTTTGGTTCCTGCCCTGGAATCCCTTTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS TCA 90 bp GAAAGTGGGTGGAAAAGGGATTCCAGGGCAGGAACCAAAGGTAGATaGTCTCTGAAGGCAGAGGGTCAGGGTGCCCACTTTCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: ESGWKRDSRAGTKGR*SLKAEGQGAHFLEQ
Trigger: TTGCTCAAGAAAGTGGGCACCCTGACCCTCTGCCTTCAGAGATCATCTACCTTTGGTTCCTGCCCTGGAATCCCTTTTCCACCCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS CCA 90 bp AGCCTCATCTGCCTCCTCATCCACGAGCTCCCGTTGGGTGAAAAATaGTTGACGGCTTCTAATCTCTTCAAGCATCTTCTGGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: SLICLLIHELPLGEK*LTASNLFKHLLGQH
Trigger: GTGTTGGCCCAGAAGATGCTTGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCGTGGATGAGGAGGCAGATGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS CCA 90 bp AGTTTTTCTCCTTCCCGCAGAGGTTCTGGCTCAAGAACCTACAGATaGACGGAGCTTACAGTACGGCATCAAAAGGCAGACGGATTGGGG +
Preference number: 5 (lower is better)
Translates to: SFSPSRRGSGSRTYR*TELTVRHQKADGLG
Trigger: CCCCAATCCGTCTGCCTTTTGATGCCGTACTGTAAGCTCCGTCCATCTGTAGGTTCTTGAGCCAGAACCTCTGCGGGAAGGAGAAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243219.7
CDS CCA 90 bp ACTTTTTCTCCTTCCCGCAGAGGTTCTGGCTCAAGAACCTACAGATaGACGGAGCTTACAGTACGGCATCAAAAGGCAGACGGATTGGGG +
Preference number: 5 (lower is better)
Translates to: TFSPSRRGSGSRTYR*TELTVRHQKADGLG
Trigger: CCCCAATCCGTCTGCCTTTTGATGCCGTACTGTAAGCTCCGTCCATCTGTAGGTTCTTGAGCCAGAACCTCTGCGGGAAGGAGAAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424408.6
CDS-3UTR CAA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAAACACTCGTTGGAATaGCCATTACAGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: QLDESFHPKEELLFLLAGKHSLE*PLQSQG
Trigger: GCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCTCAGCACCCCGGATTaGCCTTCCTCGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLLSTPD*PSSMES
Trigger: GCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCCTCATATCATGGGCTaGCTCTACCAGCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: LDESFHPKEELLFLLAGFPHIMG*LYQLTC
Trigger: GCAAGTCAGCTGGTAGAGCAAGCCCATGATATGAGG...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTATCCACGAGCTCCCGTaGGGTGAAAAATGGTTGACG +
Preference number: 5 (lower is better)
Translates to: LDESFHPKEELLFLLAGFIHELP*GEKWLT
Trigger: CGTCAACCATTTTTCACCCAACGGGAGCTCGTGGAT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAGAGTGCGGGTCTCATaGTGCAGCCGCTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKERVRVS*CSRCQL
Trigger: GAGCTGGCAGCGGCTGCACAATGAGACCCGCACTCT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGAGTTAGACGAGGTGTaGTCAGAGAGTCCGCAGATG +
Preference number: 5 (lower is better)
Translates to: LDESFHPKEELLFLLAGFELDEV*SESPQM
Trigger: CATCTGCGGACTCTCTGACAACACCTCGTCTAACTC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGAGTTAGACGAGGTGTaGTCAGAGAGTCCGCAGATG +
Preference number: 5 (lower is better)
Translates to: DESFHPKEELLFLLAGFVELDEV*SESPQM
Trigger: CATCTGCGGACTCTCTGACAACACCTCGTCTAACTC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGT +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFSIVVL*ASSVIS
Trigger: ACTGATCACCGAGGAAGCCAACAGGACGACGATGGA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGT +
Preference number: 5 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPSIVVL*ASSVIS
Trigger: ACTGATCACCGAGGAAGCCAACAGGACGACGATGGA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGACCAGTTGGTTAGATaGTTGGCCATGGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFDQLVR*LAMGAV
Trigger: CACTGCCCCCATGGCCAACAATCTAACCAACTGGTC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAWQKRC*QVASAQ
Trigger: TTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGTAGGGAGCTTGAAGTaGGAAGGCACTCCACCAACA +
Preference number: 5 (lower is better)
Translates to: DESFHPKEELLFLLAGFVVGSLK*EGTPPT
Trigger: TGTTGGTGGAGTGCCTTCCAACTTCAAGCTCCCTAC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGAAGCTGGTAGGGAGCTaGAAGTTGGAAGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: DESFHPKEELLFLLAGFVKLVGS*KLEGTP
Trigger: TGGAGTGCCTTCCAACTTCAAGCTCCCTACCAGCTT...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTGTGATGGAGGCCCCATaGAGCTGGAGATTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: MKASTRRKSYCSSWLALCVMEAP*SWRLLR
Trigger: TCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCAC...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTTTAGGTACTCCCCATaGACACTGTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWFRYSP*TLWPWT
Trigger: GGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTAGGTACTCCCCATaGACACTGTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: MKASTRRKSYCSSWLALCFRYSP*TLWPWT
Trigger: GGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGCTGCTGGACAGGAGTaGATGCTTACGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEAAGQE*MLTAPL
Trigger: CAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGCTGCTGGACAGGAGTaGATGCTTACGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEAAGQE*MLTAPL
Trigger: CAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GTCATGTCAGGCTGCTGGACAGGAGTTGATGCTTACGGCGCCGCTGACCAGGGCTCAATACAAGTAAGTTaGCCACTCCTTCAATTGTTG +
Preference number: 5 (lower is better)
Translates to: VMSGCWTGVDAYGAADQGSIQVS*PLLQLL
Trigger: CAACAATTGAAGGAGTGGCAAACTTACTTGTATTGA...GCCCTGGTCAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGCCTGACATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS TCA 90 bp ATCCCTGACATAGTTAAGGGCCTGGTCAAGTGCTTCCTGGAGATCTaGCAACTTAGCATTGTAGTCATCCAGCTGCTCCAGGACGACAGG +
Preference number: 5 (lower is better)
Translates to: IPDIVKGLVKCFLEI*QLSIVVIQLLQDDR
Trigger: CCTGTCGTCCTGGAGCAGCTGGATGACTACAATGCTAAGTTGTCAGATCTCCAGGAAGCACTTGACCAGGCCCTTAACTATGTCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS TCA 90 bp AGATGGCCCCTCTTGATGCTGGCGGCTGTGAATACATGCATTGCTTaGAGCGGACACATGACCACTACCAGTTCTCAGCTTTGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: RWPLLMLAAVNTCIA*SGHMTTTSSQLCRC
Trigger: ACACCTACAAAGCTGAGAACTGGTAGTGGTCATGTGTCCGCTTCAAGCAATGCATGTATTCACAGCCGCCAGCATCAAGAGGGGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCACAGTGCTCTCCTGTaGTGTTCCGCTGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLHSALL*CSAGSA
Trigger: TGCACTGCCAGCGGAACACAACAGGAGAGCACTGTG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGATCCACGAGCTCCCGTaGGGTGAAAAATGGTTGACG +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLIHELP*GEKWLT
Trigger: CGTCAACCATTTTTCACCCAACGGGAGCTCGTGGAT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTCCTCACTCTTTCCTGTaGTTTCTCATGGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAPHSFL*FLMVPL
Trigger: CAGCGGGACCATGAGAAACAACAGGAAAGAGTGAGG...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCCTCACTCTTTCCTGTaGTTTCTCATGGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFPHSFL*FLMVPL
Trigger: CAGCGGGACCATGAGAAACAACAGGAAAGAGTGAGG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCAACCGTACGAAGCTGATAGACTCTGCCTTTGCTaGCAGTTCTCTGGCTTGATT +
Preference number: 5 (lower is better)
Translates to: CWQKRCLQVASAQPYEADRLCLC*QFSGLI
Trigger: AATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCT...ATCAGCTTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp TTTAAGTCATCCATACTGGTTCTCGAGTGCACTTCCACAGCTGACTGGCCATCATCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGT +
Preference number: 5 (lower is better)
Translates to: FKSSILVLECTSTADWPSSIVVL*ASSVIS
Trigger: ACTGATCACCGAGGAAGCCAACAGGACGACGATGGA...TGATGGCCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTATGGATGACTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: MKASTRRKSYCSSWLALCWQKRC*QVASAQ
Trigger: TTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTATGGAGACTTGGATCTaGCTGGCAACACTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAMETWI*LATLLV
Trigger: GACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGGTAGGGAGCTTGAAGTaGGAAGGCACTCCACCAACA +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWVGSLK*EGTPPT
Trigger: TGTTGGTGGAGTGCCTTCCAACTTCAAGCTCCCTAC...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTGGCTGTTCCTCCATATaGATAGGCGTGCTCTATTGC +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAGCSSI*IGVLYC
Trigger: GCAATAGAGCACGCCTATCAATATGGAGGAACAGCC...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGGCTCCCTGTGATCAATaGGTTTTGGATTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: DESFHPKEELLFLLAGFVAPCDQ*VLDSGV
Trigger: GACCCCTGAATCCAAAACCAATTGATCACAGGGAGC...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGCTCCCTGTGATCAATaGGTTTTGGATTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: LDESFHPKEELLFLLAGFAPCDQ*VLDSGV
Trigger: GACCCCTGAATCCAAAACCAATTGATCACAGGGAGC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTGGACCAGGGTTCCGGAACTGCTTCTGGGACGGACTTCAAATGCAATTTCAAGCTCCCTGTGATCAATaGGTTTTGGATTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RGPGFRNCFWDGLQMQFQAPCDQ*VLDSGV
Trigger: GACCCCTGAATCCAAAACCAATTGATCACAGGGAGC...TTGAAATTGCATTTGAAGTCCGTCCCAGAAGCAGTTCCGGAACCCTGGTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CAA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCGCTGCTGGACAGGAGTaGATGCTTACGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESAAGQE*MLTAPL
Trigger: CAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGC...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: DESFHPKEELLFLLAGFVSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...CACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GAGCAAGGCTCCTGTAGTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAATTCCAGTCTTCTTCTaGGCTTGTTCCAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: EQGSCSHRAHCAAAMWSSIPVFF*ACSSAF
Trigger: AAAAGCACTGGAACAAGCCAAGAAGAAGACTGGAAT...TGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGACTACAGGAGCCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp CTGAGCAATGAGCTCTCGGATCCTCTGGATGCTGGCAGAAACGTTGCTTGCAGGTCCCCTAATCCTTCCTaGAAGGTTTACCTTACACTC +
Preference number: 5 (lower is better)
Translates to: LSNELSDPLDAGRNVACRSPNPS*KVYLTL
Trigger: GAGTGTAAGGTAAACCTTCAAGGAAGGATTAGGGGA...CCTGCAAGCAACGTTTCTGCCAGCATCCAGAGGATCCGAGAGCTCATTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS GCA 90 bp TTGGCGGCTGTTGGCTGTTCCTCCATATTGATAGGCGTGCTCTATTaGTCTAGGGCTGTTGGAAAGGTGGCAATGAGAGTTTCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: LAAVGCSSILIGVLY*SRAVGKVAMRVSWS
Trigger: ACTCCAAGAAACTCTCATTGCCACCTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTATCAATATGGAGGAACAGCCAACAGCCGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000604740.5
ENST00000651860.1
CDS CCA 90 bp TTCTGGCCCCATGAGATGACCATCTTTGCAAGCTATGATCACATCTaGGAATCCTCCTCACCTTCCTCTTTGCATTTGCATGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: FWPHEMTIFASYDHI*ESSSPSSLHLHGLG
Trigger: GCCAAGGCCATGCAAATGCAAAGAGGAAGGTGAGGAGGATTCCCAGATGTGATCATAGCTTGCAAAGATGGTCATCTCATGGGGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 90 bp CCACTACCAGTTCTCAGCTTTGTAGGTGTGGGCATGCACGAATTCTaGCCCCATGAGATGACCATCTTTGCAAGCTATGATCACATCTGG +
Preference number: 5 (lower is better)
Translates to: PLPVLSFVGVGMHEF*PHEMTIFASYDHIW
Trigger: CCAGATGTGATCATAGCTTGCAAAGATGGTCATCTCATGGGGCCAGAATTCGTGCATGCCCACACCTACAAAGCTGAGAACTGGTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTAAACACTCGTTGGAATaGCCATTACAGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAKHSLE*PLQSQG
Trigger: GCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATGGGCCTCCCCCGCAGTaGCACACTGCACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNGPPPQ*HTAQFL
Trigger: CAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCCC...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTTCACCACTTCCATTaGTTCCCTCACTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LDESFHPKEELLFLLAGFVHHFH*FPHSFL
Trigger: CAGGAAAGAGTGAGGGAACAAATGGAAGTGGTGAAC...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGT +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLSIVVL*ASSVIS
Trigger: ACTGATCACCGAGGAAGCCAACAGGACGACGATGGA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCAGTTGGTTAGATTGTaGGCCATGGGGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEQLVRL*AMGAVA
Trigger: GGCCACTGCCCCCATGGCCAACAATCTAACCAACTG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTAGGAGAATAAGGCCGTaGTCAGCTGGTGTTCGAACT +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLARRIRP*SAGVRT
Trigger: AGTTCGAACACCAGCTGACAACGGCCTTATTCTCCT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTAGGAGAATAAGGCCGTaGTCAGCTGGTGTTCGAACT +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFRRIRP*SAGVRT
Trigger: AGTTCGAACACCAGCTGACAACGGCCTTATTCTCCT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGGCAATGAGAGTTTCTaGGAGTATTCCGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFGNESF*EYSALG
Trigger: TCCCAGAGCGGAATACTCCAAGAAACTCTCATTGCC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAATGAGAGTTTCTaGGAGTATTCCGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAGNESF*EYSALG
Trigger: TCCCAGAGCGGAATACTCCAAGAAACTCTCATTGCC...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGGCTGTTCCTCCATATaGATAGGCGTGCTCTATTGC +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLGCSSI*IGVLYC
Trigger: GCAATAGAGCACGCCTATCAATATGGAGGAACAGCC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCATTGAGCTGGAGATaGCTGAGACAGCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAPLSWR*LRQPLK
Trigger: TTTTAGTGGCTGTCTCAGCAATCTCCAGCTCAATGG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGCAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKQPVKG*LGAKRG
Trigger: ACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTG...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCGCTGCTGGACAGGAGTaGATGCTTACGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFAAAGQE*MLTAPL
Trigger: CAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGC...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS TCA 90 bp CTCCACATCTCTATCCACCCTGGTAAAGTAGGCATTACTTGTGGGTaGGACAGAGCTAATGACGAAGTGGGACAGCCCATCATTGTACTG +
Preference number: 5 (lower is better)
Translates to: LHISIHPGKVGITCG*DRANDEVGQPIIVL
Trigger: CAGTACAATGATGGGCTGTCCCACTTCGTCATTAGCTCTGTCTCACCCACAAGTAATGCCTACTTTACCAGGGTGGATAGAGATGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGCGCAACGTTCACACTaGAATCCGGTGGTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEAQRSH*NPVVLR
Trigger: ACGCAACACCACCGGATTCAAGTGTGAACGTTGCGC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTACTCAGCACCCCGGATTaGCCTTCCTCGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLLSTPD*PSSMES
Trigger: GCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAG...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCCTTCTGAACAAGTaGTCCTTTTCTGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAFLLNK*SFSGGL
Trigger: CAAGCCTCCAGAAAAGGACAACTTGTTCAGAAGGAA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCCTCATATCATGGGCTaGCTCTACCAGCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLPHIMG*LYQLTC
Trigger: GCAAGTCAGCTGGTAGAGCAAGCCCATGATATGAGG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTGTTCACCACTTCCATTaGTTCCCTCACTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFVHHFH*FPHSFL
Trigger: CAGGAAAGAGTGAGGGAACAAATGGAAGTGGTGAAC...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TGCTGGCAGAAACGTTGCTTGCAGGTCGCTTCTGCTCAACCGTACGAAGCTGATCAATTCATTAGCTTCTaGTTGAAGGTCCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: CWQKRCLQVASAQPYEADQFISF*LKVLCM
Trigger: CATGCACAGGACCTTCAACAAGAAGCTAATGAATTG...ATCAGCTTCGTACGGTTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTTGCAGTTCTCTGGCTaGATTGAGGAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLLQFSG*IEEVLT
Trigger: AGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTAGACTCTGCCTTTGCTaGCAGTTCTCTGGCTTGATT +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFRLCLC*QFSGLI
Trigger: AATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGACCAGTTGGTTAGATaGTTGGCCATGGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEDQLVR*LAMGAV
Trigger: CACTGCCCCCATGGCCAACAATCTAACCAACTGGTC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCATGCTGGCAGAAACGTaGCTTGCAGGTCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFMLAET*LAGRFC
Trigger: GCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCAT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCCATATACTCTTTTTaGGCGTTTTTGCTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAPIYSF*AFLLPR
Trigger: CCTCGGAAGCAAAAACGCCAAAAAAGAGTATATGGG...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCAGGAACTGACGGGCTaGGAGTCCAGGGGAATCTCC +
Preference number: 5 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNQELTG*ESRGIS
Trigger: GGAGATTCCCCTGGACTCCAAGCCCGTCAGTTCCTG...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTGGGACAGCCCATCATaGTACTGCTTATCTACTGAC +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAWDSPS*YCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTGCCACAGGCCATCATaGTATTTCTCCTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPCHRPS*YFSWLL
Trigger: TAGAAGCCAGGAGAAATACAATGATGGCCTGTGGCA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTGCCACAGGCCATCATaGTATTTCTCCTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLACHRPS*YFSWLL
Trigger: TAGAAGCCAGGAGAAATACAATGATGGCCTGTGGCA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTCCATTGAGCTGGAGATaGCTGAGACAGCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: MKASTRRKSYCSSWLALCPLSWR*LRQPLK
Trigger: TTTTAGTGGCTGTCTCAGCAATCTCCAGCTCAATGG...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTCCATTGAGCTGGAGATaGCTGAGACAGCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAPLSWR*LRQPLK
Trigger: TTTTAGTGGCTGTCTCAGCAATCTCCAGCTCAATGG...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGATTCCAGTCTTCTTCTaGGCTTGTTCCAGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VTEPTVQRQCGHQSLHKLIPVFF*ACSSAF
Trigger: AAAAGCACTGGAACAAGCCAAGAAGAAGACTGGAAT...CAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCACAGTGCTCTCCTGTaGTGTTCCGCTGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: VISPVGIACALNTSKFATHSALL*CSAGSA
Trigger: TGCACTGCCAGCGGAACACAACAGGAGAGCACTGTG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGGGGCCTCCCCCGCAGTaGCACACTGCACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEGPPPQ*HTAQFL
Trigger: CAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCCC...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACTCAGCACCCCGGATTaGCCTTCCTCGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQLSTPD*PSSMES
Trigger: GCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAG...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATAGAGTGCGGGTCTCATaGTGCAGCCGCTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNRVRVS*CSRCQL
Trigger: GAGCTGGCAGCGGCTGCACAATGAGACCCGCACTCT...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGAGTTAGACGAGGTGTaGTCAGAGAGTCCGCAGATG +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFELDEV*SESPQM
Trigger: CATCTGCGGACTCTCTGACAACACCTCGTCTAACTC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCATTAGCTTCTTGTaGAAGGTCCTGTGCATGGTC +
Preference number: 5 (lower is better)
Translates to: MKASTRRKSYCSSWLALCFISFL*KVLCMV
Trigger: GACCATGCACAGGACCTTCAACAAGAAGCTAATGAA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCAGTTGGTTAGATTGTaGGCCATGGGGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VISPVGIACALNTSKFATQLVRL*AMGAVA
Trigger: GGCCACTGCCCCCATGGCCAACAATCTAACCAACTG...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTAGATTCTGTGACCAGTaGGTTAGATTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLARFCDQ*VRLLAM
Trigger: CATGGCCAACAATCTAACCAACTGGTCACAGAATCT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGAGATTCTGTGACCAGTaGGTTAGATTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLRFCDQ*VRLLAM
Trigger: CATGGCCAACAATCTAACCAACTGGTCACAGAATCT...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFWQKRC*QVASAQ
Trigger: TTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTCCCATATACTCTTTTTaGGCGTTTTTGCTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAPIYSF*AFLLPR
Trigger: CCTCGGAAGCAAAAACGCCAAAAAAGAGTATATGGG...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACAGGAACTGACGGGCTaGGAGTCCAGGGGAATCTCC +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQQELTG*ESRGIS
Trigger: GGAGATTCCCCTGGACTCCAAGCCCGTCAGTTCCTG...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTATTGAAGTCCTTCTTTaGGAACTGGAAGCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLAIEVLL*ELEALH
Trigger: ATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAAT...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCCGTATCCTCCTTCTGTaGAAAAGTAAGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: QLDESFHPKEELLFLLAGRILLL*KSKFLF
Trigger: AAACAGGAACTTACTTTTCAACAGAAGGAGGATACG...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTTTTAGGTACTCCCCATaGACACTGTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSIFRYSP*TLWPWT
Trigger: GGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAA...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTCACAGAGACTCTGCTaGGGTGTAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLSQRLC*GVTEVE
Trigger: TTCCACCTCAGTTACACCCAAGCAGAGTCTCTGTGA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGGAACACCTCCAACAAACACAGGCTCCCTGTGATCAATTGGTTTTGGATTCATCACAGAGACTCTGCTaGGGTGTAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LEHLQQTQAPCDQLVLDSSQRLC*GVTEVE
Trigger: TTCCACCTCAGTTACACCCAAGCAGAGTCTCTGTGA...TGAATCCAAAACCAATTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651529.1
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTGTGATCAATTGGTTTaGGATTCAGGGGTCCAACCA +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWCDQLV*DSGVQP
Trigger: TGGTTGGACCCCTGAATCCAAAACCAATTGATCACA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGACAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRQPVKG*LGAKRG
Trigger: ACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTG...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGCTGCTGGACAGGAGTaGATGCTTACGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRAAGQE*MLTAPL
Trigger: CAGCGGCGCCGTAAGCATCAACTCCTGTCCAGCAGC...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTCCATTGCAGACACTTaGGATTCAAGGTTAAGAATC +
Preference number: 5 (lower is better)
Translates to: QLDESFHPKEELLFLLAGSIADT*DSRLRI
Trigger: GATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGA...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTCCCTCCCCTCTCAGTTaGGAGCCCCTCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPPSPLS*EPLQGL
Trigger: GAGCCCTTGGAGGGGCTCCAAACTGAGAGGGGAGGG...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522006.5
CDS TCA 90 bp CAAGCAGATTTGGCTCAGCGTGAATGGAGCTCTTCTCCGAGAAGCTaGTTCCATTCTCTCAACTTGGGAGATTCTGTTTCAGAGATCTCA +
Preference number: 5 (lower is better)
Translates to: QADLAQREWSSSPRS*FHSLNLGDSVSEIS
Trigger: TGAGATCTCTGAAACAGAATCTCCCAAGTTGAGAGAATGGAATCAGCTTCTCGGAGAAGAGCTCCATTCACGCTGAGCCAAATCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS GCA 90 bp GTTCTGAAAGAGTTAGACGAGGTGTTGTCAGAGAGTCCGCAGATGTaGTCAGAGACATGTTCACCACTTCCATTTGTTCCCTCACTCTTT +
Preference number: 5 (lower is better)
Translates to: VLKELDEVLSESPQM*SETCSPLPFVPSLF
Trigger: AAAGAGTGAGGGAACAAATGGAAGTGGTGAACATGTCTCTGAGCACATCTGCGGACTCTCTGACAACACCTCGTCTAACTCTTTCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS CCA 90 bp CGTTCACACTTGAATCCGGTGGTGTTGCGTAAGCAATTCCTACACTaGCCAGTGACTTCATCACAATCTTCAAAGATCAGGTTGGGATCT +
Preference number: 5 (lower is better)
Translates to: RSHLNPVVLRKQFLH*PVTSSQSSKIRLGS
Trigger: AGATCCCAACCTGATCTTTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGAATTGCTTACGCAACACCACCGGATTCAAGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000518842.1
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCAAACACTCGTTGGAATaGCCATTACAGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFKHSLE*PLQSQG
Trigger: GCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATGGGCCTCCCCCGCAGTaGCACACTGCACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDGPPPQ*HTAQFL
Trigger: CAAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCCC...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GTCACAGAGCCCACTGTGCAGCGGCAATGTGGTCATCAGTCCCTTCATAAACTGGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: VTEPTVQRQCGHQSLHKLVFSAL*ICIFLR
Trigger: CCTAAGAAAGATACAAATCAACAATGCTGAGAACAC...CAGTTTATGAAGGGACTGATGACCACATTGCCGCTGCACAGTGGGCTCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCCCTCATATCATGGGCTaGCTCTACCAGCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESPHIMG*LYQLTC
Trigger: GCAAGTCAGCTGGTAGAGCAAGCCCATGATATGAGG...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTTGGGTGAAAAATGGTaGACGGCTTCTAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLALGEKW*TASNLF
Trigger: GAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTTGGGTGAAAAATGGTaGACGGCTTCTAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLLGEKW*TASNLF
Trigger: GAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTTGGGTGAAAAATGGTaGACGGCTTCTAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWLGEKW*TASNLF
Trigger: GAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTATCCACGAGCTCCCGTaGGGTGAAAAATGGTTGACG +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSIIHELP*GEKWLT
Trigger: CGTCAACCATTTTTCACCCAACGGGAGCTCGTGGAT...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTACTTGTAGTTCACTTTaGGCTCCATCTATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LDESFHPKEELLFLLAGFTCSSL*APSISA
Trigger: TGCAGAAATAGATGGAGCCAAAAGTGAACTACAAGT...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTACTTGTAGTTCACTTTaGGCTCCATCTATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLATCSSL*APSISA
Trigger: TGCAGAAATAGATGGAGCCAAAAGTGAACTACAAGT...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCAATTCATTAGCTTCTaGTTGAAGGTCCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFQFISF*LKVLCM
Trigger: CATGCACAGGACCTTCAACAAGAAGCTAATGAATTG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGT +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFASIVVL*ASSVIS
Trigger: ACTGATCACCGAGGAAGCCAACAGGACGACGATGGA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTGACCAGTTGGTTAGATaGTTGGCCATGGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VISPVGIACALNTSKFATDQLVR*LAMGAV
Trigger: CACTGCCCCCATGGCCAACAATCTAACCAACTGGTC...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATATGCTGGCAGAAACGTaGCTTGCAGGTCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNMLAET*LAGRFC
Trigger: GCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCAT...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AAGAGTCAAAATGTTGAAGATTCTGTGACCAGTTGGTTAGATTGTTGGCCATGGATGCTGGCAGAAACGTaGCTTGCAGGTCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: KSQNVEDSVTSWLDCWPWMLAET*LAGRFC
Trigger: GCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCAT...CCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTCAACATTTTGACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCATGGAGACTTGGATCTaGCTGGCAACACTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFMETWI*LATLLV
Trigger: GACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTTAAGTCATCCATACTGGTTCTCGAGTGCACTTCCACAGCTGACTGGCCATCAAAACATCATGGAGACTaGGATCTTGCTGGCAACACT +
Preference number: 5 (lower is better)
Translates to: FKSSILVLECTSTADWPSKHHGD*DLAGNT
Trigger: AGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT...TGATGGCCAGTCAGCTGTGGAAGTGCACTCGAGAACCAGTATGGATGACTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTGTAGGGAGCTTGAAGTaGGAAGGCACTCCACCAACA +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSIVGSLK*EGTPPT
Trigger: TGTTGGTGGAGTGCCTTCCAACTTCAAGCTCCCTAC...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCAAGCTGGTAGGGAGCTaGAAGTTGGAAGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESKLVGS*KLEGTP
Trigger: TGGAGTGCCTTCCAACTTCAAGCTCCCTACCAGCTT...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCAAAAACATACTTCCATaGACCATCAGGAGAATAAGG +
Preference number: 5 (lower is better)
Translates to: QLDESFHPKEELLFLLAGKNILP*TIRRIR
Trigger: CCTTATTCTCCTGATGGTCAATGGAAGTATGTTTTT...GCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTTCATTATCCATGCTCTaGACATGCCTTCTGTCAACT +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLASLSML*TCLLST
Trigger: AGTTGACAGAAGGCATGTCAAGAGCATGGATAATGA...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTCATTATCCATGCTCTaGACATGCCTTCTGTCAACT +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLSLSML*TCLLST
Trigger: AGTTGACAGAAGGCATGTCAAGAGCATGGATAATGA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTCATTATCCATGCTCTaGACATGCCTTCTGTCAACT +
Preference number: 5 (lower is better)
Translates to: MKASTRRKSYCSSWLALCSLSML*TCLLST
Trigger: AGTTGACAGAAGGCATGTCAAGAGCATGGATAATGA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTATTGAAGTCCTTCTTTaGGAACTGGAAGCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFIEVLL*ELEALH
Trigger: ATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAAT...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGATTGAAGTCCTTCTTTaGGAACTGGAAGCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPIEVLL*ELEALH
Trigger: ATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAAT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTCTGCTCCAGTAAATaGAAGTCCTTCTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAVCSSK*KSFFWN
Trigger: GTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGAC...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGTCTGCTCCAGTAAATaGAAGTCCTTCTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLVCSSK*KSFFWN
Trigger: GTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGAC...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGATGAAGCTCTGTCCATaGAAATATGCTCTGCGAGAT +
Preference number: 5 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPMKLCP*KYALRD
Trigger: ATCTCGCAGAGCATATTTCAATGGACAGAGCTTCAT...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTATGAAGCTCTGTCCATaGAAATATGCTCTGCGAGAT +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLAMKLCP*KYALRD
Trigger: ATCTCGCAGAGCATATTTCAATGGACAGAGCTTCAT...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGGCTGTTCCTCCATATaGATAGGCGTGCTCTATTGC +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEGCSSI*IGVLYC
Trigger: GCAATAGAGCACGCCTATCAATATGGAGGAACAGCC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTGCCACAGGCCATCATaGTATTTCTCCTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLCHRPS*YFSWLL
Trigger: TAGAAGCCAGGAGAAATACAATGATGGCCTGTGGCA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTATTTAGGTACTCCCCATaGACACTGTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLFRYSP*TLWPWT
Trigger: GGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAA...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTCACAGAGACTCTGCTaGGGTGTAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEESQRLC*GVTEVE
Trigger: TTCCACCTCAGTTACACCCAAGCAGAGTCTCTGTGA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGCTCCCTGTGATCAATaGGTTTTGGATTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEAPCDQ*VLDSGV
Trigger: GACCCCTGAATCCAAAACCAATTGATCACAGGGAGC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTCAGCCTGTGAAGGGTTaGCTGGGGGCCAAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPQPVKG*LGAKRG
Trigger: ACCACGCTTGGCCCCCAGCAAACCCTTCACAGGCTG...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp AACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTCCATTGCAGACACTTaGGATTCAAGGTTAAGAATC +
Preference number: 5 (lower is better)
Translates to: NSMKASTRRKSYCSSWLASIADT*DSRLRI
Trigger: GATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGA...AGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 90 bp TGGCACTTGTGTACAAATAACTGCTCAAGCAGATTTGGCTCAGCGTaGATGGAGCTCTTCTCCGAGAAGCTGATTCCATTCTCTCAACTT +
Preference number: 5 (lower is better)
Translates to: WHLCTNNCSSRFGSA*MELFSEKLIPFSQL
Trigger: AAGTTGAGAGAATGGAATCAGCTTCTCGGAGAAGAGCTCCATTCACGCTGAGCCAAATCTGCTTGAGCAGTTATTTGTACACAAGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 90 bp AGGGTTTCTGTCTGCTCCAGTAAATTGAAGTCCTTCTTTTGGAACTaGAAGCCCTTCATGCATCCTCTGAAGTTGATATCTAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RVSVCSSKLKSFFWN*KPFMHPLKLISRGR
Trigger: CCTTCCCCTAGATATCAACTTCAGAGGATGCATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGACAGAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCACAGTGCTCTCCTGTaGTGTTCCGCTGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEHSALL*CSAGSA
Trigger: TGCACTGCCAGCGGAACACAACAGGAGAGCACTGTG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCTCAGCACCCCGGATTaGCCTTCCTCGATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVLSTPD*PSSMES
Trigger: GCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAG...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTCTTGTTGTTGATCTCTaGGATTTTATCCCTCATATC +
Preference number: 5 (lower is better)
Translates to: LDESFHPKEELLFLLAGFLVVDL*DFIPHI
Trigger: GATATGAGGGATAAAATCCAAGAGATCAACAACAAG...AAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGTTCACCACTTCCATTaGTTCCCTCACTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFVHHFH*FPHSFL
Trigger: CAGGAAAGAGTGAGGGAACAAATGGAAGTGGTGAAC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATTGCAGTTCTCTGGCTaGATTGAGGAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKELQFSG*IEEVLT
Trigger: AGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTTGCAGTTCTCTGGCTaGATTGAGGAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFLQFSG*IEEVLT
Trigger: AGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCAGACTCTGCCTTTGCTaGCAGTTCTCTGGCTTGATT +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFRLCLC*QFSGLI
Trigger: AATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCT...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAGACTCTGCCTTTGCTaGCAGTTCTCTGGCTTGATT +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKERLCLC*QFSGLI
Trigger: AATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGCAGTTGGTTAGATTGTaGGCCATGGGGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEQLVRL*AMGAVA
Trigger: GGCCACTGCCCCCATGGCCAACAATCTAACCAACTG...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAGATTCTGTGACCAGTaGGTTAGATTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLRFCDQ*VRLLAM
Trigger: CATGGCCAACAATCTAACCAACTGGTCACAGAATCT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNWQKRC*QVASAQ
Trigger: TTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGAAACATCATGGAGACTaGGATCTTGCTGGCAACACT +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLKHHGD*DLAGNT
Trigger: AGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTCAGGAACTGACGGGCTaGGAGTCCAGGGGAATCTCC +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPQELTG*ESRGIS
Trigger: GGAGATTCCCCTGGACTCCAAGCCCGTCAGTTCCTG...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTGGGACAGCCCATCATaGTACTGCTTATCTACTGAC +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEWDSPS*YCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTGGCAATGAGAGTTTCTaGGAGTATTCCGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSIGNESF*EYSALG
Trigger: TCCCAGAGCGGAATACTCCAAGAAACTCTCATTGCC...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTGGCTGTTCCTCCATATaGATAGGCGTGCTCTATTGC +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSIGCSSI*IGVLYC
Trigger: GCAATAGAGCACGCCTATCAATATGGAGGAACAGCC...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGCCATTGAGCTGGAGATaGCTGAGACAGCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEPLSWR*LRQPLK
Trigger: TTTTAGTGGCTGTCTCAGCAATCTCCAGCTCAATGG...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGTGATGGAGGCCCCATaGAGCTGGAGATTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQVMEAP*SWRLLR
Trigger: TCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCAC...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGCGTATCCTCCTTCTGTaGAAAAGTAAGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPRILLL*KSKFLF
Trigger: AAACAGGAACTTACTTTTCAACAGAAGGAGGATACG...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTCTCTGATGCCATTATaGACTTTCACTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLSLMPL*TFTMTC
Trigger: ACAGGTCATAGTGAAAGTCAATAATGGCATCAGAGA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTCTCTGATGCCATTATaGACTTTCACTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: MKASTRRKSYCSSWLALCSLMPL*TFTMTC
Trigger: ACAGGTCATAGTGAAAGTCAATAATGGCATCAGAGA...ACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTCTCTGATGCCATTATaGACTTTCACTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSLMPL*TFTMTC
Trigger: ACAGGTCATAGTGAAAGTCAATAATGGCATCAGAGA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTTCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSISSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGTCCATTGCAGACACTTaGGATTCAAGGTTAAGAATC +
Preference number: 5 (lower is better)
Translates to: FNSMKASTRRKSYCSSWLSIADT*DSRLRI
Trigger: GATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGA...CAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 90 bp GATCTGAATTTCCACTGCAGTCACATTTCTTACAGGTGCTTCCAATaGGTAAGGGGTTTCCATAGTAACCGGGAGCACATCTTTCACAGT +
Preference number: 5 (lower is better)
Translates to: DLNFHCSHISYRCFQ*VRGFHSNREHIFHS
Trigger: ACTGTGAAAGATGTGCTCCCGGTTACTATGGAAACCCCTTACTCATTGGAAGCACCTGTAAGAAATGTGACTGCAGTGGAAATTCAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS TCA 90 bp CTGGCCAGTGACTTCATCACAATCTTCAAAGATCAGGTTGGGATCTaGATTTCCACTGCAGTCACATTTCTTACAGGTGCTTCCAATGAG +
Preference number: 5 (lower is better)
Translates to: LASDFITIFKDQVGI*ISTAVTFLTGASNE
Trigger: CTCATTGGAAGCACCTGTAAGAAATGTGACTGCAGTGGAAATTCAGATCCCAACCTGATCTTTGAAGATTGTGATGAAGTCACTGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATCACAGTGCTCTCCTGTaGTGTTCCGCTGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDHSALL*CSAGSA
Trigger: TGCACTGCCAGCGGAACACAACAGGAGAGCACTGTG...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGCGCAACGTTCACACTaGAATCCGGTGGTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNAQRSH*NPVVLR
Trigger: ACGCAACACCACCGGATTCAAGTGTGAACGTTGCGC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTCTTGTTGTTGATCTCTaGGATTTTATCCCTCATATC +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFLVVDL*DFIPHI
Trigger: GATATGAGGGATAAAATCCAAGAGATCAACAACAAG...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp GTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTCTTGTTGTTGATCTCTaGGATTTTATCCCTCATATC +
Preference number: 5 (lower is better)
Translates to: VQLDESFHPKEELLFLLALVVDL*DFIPHI
Trigger: GATATGAGGGATAAAATCCAAGAGATCAACAACAAG...AGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTGTTCACCACTTCCATTaGTTCCCTCACTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSIVHHFH*FPHSFL
Trigger: CAGGAAAGAGTGAGGGAACAAATGGAAGTGGTGAAC...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTCATTAGCTTCTTGTaGAAGGTCCTGTGCATGGTC +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEFISFL*KVLCMV
Trigger: GACCATGCACAGGACCTTCAACAAGAAGCTAATGAA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATCCATCGTCGTCCTGTaGGCTTCCTCGGTGATCAGT +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRSIVVL*ASSVIS
Trigger: ACTGATCACCGAGGAAGCCAACAGGACGACGATGGA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAGATTCTGTGACCAGTaGGTTAGATTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKERFCDQ*VRLLAM
Trigger: CATGGCCAACAATCTAACCAACTGGTCACAGAATCT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCATGGAGACTTGGATCTaGCTGGCAACACTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFAMETWI*LATLLV
Trigger: GACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAATGGAGACTTGGATCTaGCTGGCAACACTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLMETWI*LATLLV
Trigger: GACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAAACATCATGGAGACTaGGATCTTGCTGGCAACACT +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEKHHGD*DLAGNT
Trigger: AGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAAAGCTGGTAGGGAGCTaGAAGTTGGAAGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQKLVGS*KLEGTP
Trigger: TGGAGTGCCTTCCAACTTCAAGCTCCCTACCAGCTT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGGTCTGCTCCAGTAAATaGAAGTCCTTCTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLVCSSK*KSFFWN
Trigger: GTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGAC...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTGGGACAGCCCATCATaGTACTGCTTATCTACTGAC +
Preference number: 5 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRWDSPS*YCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCA...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATTCACAGAGACTCTGCTaGGGTGTAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNSQRLC*GVTEVE
Trigger: TTCCACCTCAGTTACACCCAAGCAGAGTCTCTGTGA...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATGTGATCAATTGGTTTaGGATTCAGGGGTCCAACCA +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKECDQLV*DSGVQP
Trigger: TGGTTGGACCCCTGAATCCAAAACCAATTGATCACA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCGCTCCCTGTGATCAATaGGTTTTGGATTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFAAPCDQ*VLDSGV
Trigger: GACCCCTGAATCCAAAACCAATTGATCACAGGGAGC...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGCTGGCTTTGTGTTTTTCAATTGTTGTCCATaGCAGACACTTTGGATTCAA +
Preference number: 5 (lower is better)
Translates to: ESFHPKEELLFLLAGFVFFNCCP*QTLWIQ
Trigger: TTGAATCCAAAGTGTCTGCAATGGACAACAATTGAA...AAACACAAAGCCAGCCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGTTCAATTGTTGTCCATaGCAGACACTTTGGATTCAA +
Preference number: 5 (lower is better)
Translates to: RSLMIRLSPVQLDESFHPFNCCP*QTLWIQ
Trigger: TTGAATCCAAAGTGTCTGCAATGGACAACAATTGAA...CGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTTCAATTGTTGTCCATaGCAGACACTTTGGATTCAA +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWFNCCP*QTLWIQ
Trigger: TTGAATCCAAAGTGTCTGCAATGGACAACAATTGAA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCCTCCTGGTCAATACAAGTAAGTTaGCCACTCCTTCAATTGTTG +
Preference number: 5 (lower is better)
Translates to: LFNSMKASTRRKSYCSSWSIQVS*PLLQLL
Trigger: CAACAATTGAAGGAGTGGCAAACTTACTTGTATTGA...CCAGGAGGAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCACAAGAAGTGTTCATGTaGGAGCCCTGGCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LKVNKADTEVLYAFKIKAQEVFM*EPWLLW
Trigger: CCAGAGAAGCCAGGGCTCCAACATGAACACTTCTTG...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS CCA 90 bp AAACATACTTCCATTGACCATCAGGAGAATAAGGCCGTTGTCAGCTaGTGTTCGAACTTCTATGTCAAAGCGAGTCACCTGACCAAATTT +
Preference number: 5 (lower is better)
Translates to: KHTSIDHQENKAVVS*CSNFYVKASHLTKF
Trigger: AAATTTGGTCAGGTGACTCGCTTTGACATAGAAGTTCGAACACCAGCTGACAACGGCCTTATTCTCCTGATGGTCAATGGAAGTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000519245.1
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAAAACACTCGTTGGAATaGCCATTACAGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQKHSLE*PLQSQG
Trigger: GCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GTCATCAGTCCCTTCATAAACTGTGGGCTCTCTGAATGGACACTGTCTTCTGAGGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: VISPFINCGLSEWTLSSEVFSAL*ICIFLR
Trigger: CCTAAGAAAGATACAAATCAACAATGCTGAGAACAC...CTCAGAAGACAGTGTCCATTCAGAGAGCCCACAGTTTATGAAGGGACTGATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGAGTTAGACGAGGTGTaGTCAGAGAGTCCGCAGATG +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRELDEV*SESPQM
Trigger: CATCTGCGGACTCTCTGACAACACCTCGTCTAACTC...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp AAGAGTCAAAATGTTGAAGATTCTGTGACCAGTTGGTTAGATTGTTGGCCATGGTTGCAGTTCTCTGGCTaGATTGAGGAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: KSQNVEDSVTSWLDCWPWLQFSG*IEEVLT
Trigger: AGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAA...CCATGGCCAACAATCTAACCAACTGGTCACAGAATCTTCAACATTTTGACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGACCAGTTGGTTAGATaGTTGGCCATGGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPDQLVR*LAMGAV
Trigger: CACTGCCCCCATGGCCAACAATCTAACCAACTGGTC...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCATGCTGGCAGAAACGTaGCTTGCAGGTCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVMLAET*LAGRFC
Trigger: GCAGAAGCGACCTGCAAGCAACGTTTCTGCCAGCAT...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAATGGAGACTTGGATCTaGCTGGCAACACTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRMETWI*LATLLV
Trigger: GACCAGAAGTGTTGCCAGCAAGATCCAAGTCTCCAT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATAAGCTGGTAGGGAGCTaGAAGTTGGAAGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNKLVGS*KLEGTP
Trigger: TGGAGTGCCTTCCAACTTCAAGCTCCCTACCAGCTT...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAAGGAGAATAAGGCCGTaGTCAGCTGGTGTTCGAACT +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQRRIRP*SAGVRT
Trigger: AGTTCGAACACCAGCTGACAACGGCCTTATTCTCCT...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAATCATTATCCATGCTCTaGACATGCCTTCTGTCAACT +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKESLSML*TCLLST
Trigger: AGTTGACAGAAGGCATGTCAAGAGCATGGATAATGA...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAATTGAAGTCCTTCTTTaGGAACTGGAAGCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEIEVLL*ELEALH
Trigger: ATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAAT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCGTCTGCTCCAGTAAATaGAAGTCCTTCTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFVCSSK*KSFFWN
Trigger: GTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGAC...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAGGCAATGAGAGTTTCTaGGAGTATTCCGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQGNESF*EYSALG
Trigger: TCCCAGAGCGGAATACTCCAAGAAACTCTCATTGCC...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTATGCCACAGGCCATCATaGTATTTCTCCTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: SLPLLQLLSIADTLDSRLCHRPS*YFSWLL
Trigger: TAGAAGCCAGGAGAAATACAATGATGGCCTGTGGCA...TAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGCCATTGAGCTGGAGATaGCTGAGACAGCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKPLSWR*LRQPLK
Trigger: TTTTAGTGGCTGTCTCAGCAATCTCCAGCTCAATGG...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATGTGATGGAGGCCCCATaGAGCTGGAGATTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDVMEAP*SWRLLR
Trigger: TCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCAC...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGTGATGGAGGCCCCATaGAGCTGGAGATTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVVMEAP*SWRLLR
Trigger: TCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCAC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGCGTATCCTCCTTCTGTaGAAAAGTAAGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLRILLL*KSKFLF
Trigger: AAACAGGAACTTACTTTTCAACAGAAGGAGGATACG...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTTTAGGTACTCCCCATaGACACTGTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDFRYSP*TLWPWT
Trigger: GGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTTTAGGTACTCCCCATaGACACTGTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPFRYSP*TLWPWT
Trigger: GGTCCACGGCCACAGTGTCAATGGGGAGTACCTAAA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATCACAGAGACTCTGCTaGGGTGTAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQSQRLC*GVTEVE
Trigger: TTCCACCTCAGTTACACCCAAGCAGAGTCTCTGTGA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATCCTCCTGGCTGGCTTaGTGTTTCTTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQSSWLA*CFFQCS
Trigger: AGAGCACTGAAAGAAACACAAAGCCAGCCAGGAGGA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATGGGATCTCATTATGTaGCCCAGGCTAGGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPWDLIM*PRLGAN
Trigger: GTTTGCTCCTAGCCTGGGCAACATAATGAGATCCCA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS TCA 90 bp ATGACGAAGTGGGACAGCCCATCATTGTACTGCTTATCTACTGACTaGACTTTGATTCCCTTTACATCCATGATGACAGTACCATTATCC +
Preference number: 5 (lower is better)
Translates to: MTKWDSPSLYCLSTD*TLIPFTSMMTVPLS
Trigger: GGATAATGGTACTGTCATCATGGATGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCACTTCGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 90 bp GCTAATGACGAAGTGGGACAGCCCATCATTGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTTTACATCCATGATGACAGTACCATT +
Preference number: 5 (lower is better)
Translates to: ANDEVGQPIIVLLIY*LNFDSLYIHDDSTI
Trigger: AATGGTACTGTCATCATGGATGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCACTTCGTCATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS CCA 90 bp CTATGCATTGCTTACCCACTTGCAAGAATAACAGACCCATACACATaGACACAAGCATCAGAACTACTGCGTTCTTATCAAAGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: LCIAYPLARITDPYT*TQASELLRSYQSKN
Trigger: GTTCTTGCTTTGATAAGAACGCAGTAGTTCTGATGCTTGTGTCCATGTGTATGGGTCTGTTATTCTTGCAAGTGGGTAAGCAATGCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS-3UTR CAA 90 bp TTTTGTATACTCTATATTTTGTGGCTGAATGGCTTAGGTCAGCTTTACCAACAGAAACACTCGTTGGAATaGCCATTACAGTCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: FCILYILWLNGLGQLYQQKHSLE*PLQSQG
Trigger: GCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTT...CTGTTGGTAAAGCTGACCTAAGCCATTCAGCCACAAAATATAGAGTATACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATATCCACGAGCTCCCGTaGGGTGAAAAATGGTTGACG +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDIHELP*GEKWLT
Trigger: CGTCAACCATTTTTCACCCAACGGGAGCTCGTGGAT...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATCCTCACTCTTTCCTGTaGTTTCTCATGGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDPHSFL*FLMVPL
Trigger: CAGCGGGACCATGAGAAACAACAGGAAAGAGTGAGG...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTCCTCACTCTTTCCTGTaGTTTCTCATGGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPPHSFL*FLMVPL
Trigger: CAGCGGGACCATGAGAAACAACAGGAAAGAGTGAGG...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTTCATTAGCTTCTTGTaGAAGGTCCTGTGCATGGTC +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFAFISFL*KVLCMV
Trigger: GACCATGCACAGGACCTTCAACAAGAAGCTAATGAA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCATTGCAGTTCTCTGGCTaGATTGAGGAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPLQFSG*IEEVLT
Trigger: AGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAA...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTGGCAGAAACGTTGCTaGCAGGTCGCTTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVWQKRC*QVASAQ
Trigger: TTGAGCAGAAGCGACCTGCAAGCAACGTTTCTGCCA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTAAACATCATGGAGACTaGGATCTTGCTGGCAACACT +
Preference number: 5 (lower is better)
Translates to: VISPVGIACALNTSKFATKHHGD*DLAGNT
Trigger: AGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGTAGGGAGCTTGAAGTaGGAAGGCACTCCACCAACA +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVVGSLK*EGTPPT
Trigger: TGTTGGTGGAGTGCCTTCCAACTTCAAGCTCCCTAC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTCCTTCAATTATTGAAGTCCTTCTTTaGGAACTGGAAGCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: PVGIACALNTSKFATPSIIEVLL*ELEALH
Trigger: ATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAAT...AATTGAAGGAGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAATGGGACAGCCCATCATaGTACTGCTTATCTACTGAC +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQWDSPS*YCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCA...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGGCAATGAGAGTTTCTaGGAGTATTCCGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNGNESF*EYSALG
Trigger: TCCCAGAGCGGAATACTCCAAGAAACTCTCATTGCC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGGCTGTTCCTCCATATaGATAGGCGTGCTCTATTGC +
Preference number: 5 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNGCSSI*IGVLYC
Trigger: GCAATAGAGCACGCCTATCAATATGGAGGAACAGCC...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGCCACAGGCCATCATaGTATTTCTCCTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRCHRPS*YFSWLL
Trigger: TAGAAGCCAGGAGAAATACAATGATGGCCTGTGGCA...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGTGTGATCAATTGGTTTaGGATTCAGGGGTCCAACCA +
Preference number: 5 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKCDQLV*DSGVQP
Trigger: TGGTTGGACCCCTGAATCCAAAACCAATTGATCACA...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTCAATACAAGTAAGTTaGCCACTCCTTCAATTGTTG +
Preference number: 5 (lower is better)
Translates to: RLSPVQLDESFHPKEELLSIQVS*PLLQLL
Trigger: CAACAATTGAAGGAGTGGCAAACTTACTTGTATTGA...CAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 90 bp CCTCTACGTCAGACAGAAGGCTTTTCATCGTGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGGCGTATTGGTTTTCTCTTTCTGACA +
Preference number: 5 (lower is better)
Translates to: PLRQTEGFSSCSQHC*FVSFLGRIGFLFLT
Trigger: TGTCAGAAAGAGAAAACCAATACGCCCTAAGAAAGATACAAATCAACAATGCTGAGAACACGATGAAAAGCCTTCTGTCTGACGTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521732.5
ENST00000522006.5
CDS TCA 90 bp ATATCTGAACTGTGCAACTTCCTGCTCAATTCATTAGCTTCTTGTTaGAGGTCCTGTGCATGGTCAATAGCTTCTTGGACTAAATCATGG +
Preference number: 5 (lower is better)
Translates to: ISELCNFLLNSLASC*RSCAWSIASWTKSW
Trigger: CCATGATTTAGTCCAAGAAGCTATTGACCATGCACAGGACCTTCAACAAGAAGCTAATGAATTGAGCAGGAAGTTGCACAGTTCAGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS TCA 90 bp ATTACTTATGCAGCCAGTGAAATTAGCATACTGAGCACTGATTGGTaGGCCACCGAAGTAAAACTTCTTTTCACTTGCTTGTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ITYAASEISILSTDW*ATEVKLLFTCLCLF
Trigger: GAACAGACACAAGCAAGTGAAAAGAAGTTTTACTTCGGTGGCTCACCAATCAGTGCTCAGTATGCTAATTTCACTGGCTGCATAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521693.1
ENST00000522006.5
ENST00000604740.5
ENST00000651529.1
CDS TCA 90 bp ACCCTGTATGCACAGCATGGGCGACATGTACTTACTTTTGGGATTTaGAGGACTGATCTATGGGTTATATTTAAGAGGAAGAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: TLYAQHGRHVLTFGI*RTDLWVIFKRKRSS
Trigger: AGAACTTCTCTTCCTCTTAAATATAACCCATAGATCAGTCCTTCAAATCCCAAAAGTAAGTACATGTCGCCCATGCTGTGCATACAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 90 bp GTGAATGGAGCTCTTCTCCGAGAAGCTGATTCCATTCTCTCAACTTaGGAGATTCTGTTTCAGAGATCTCACACAGTATTTGTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: VNGALLREADSILST*EILFQRSHTVFVKN
Trigger: ATTTTTGACAAATACTGTGTGAGATCTCTGAAACAGAATCTCCCAAGTTGAGAGAATGGAATCAGCTTCTCGGAGAAGAGCTCCATTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEVFSAL*ICIFLR
Trigger: CCTAAGAAAGATACAAATCAACAATGCTGAGAACAC...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEVFSAL*ICIFLR
Trigger: CCTAAGAAAGATACAAATCAACAATGCTGAGAACAC...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTTGGGTGAAAAATGGTaGACGGCTTCTAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFALGEKW*TASNLF
Trigger: GAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCAATTCATTAGCTTCTaGTTGAAGGTCCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNQFISF*LKVLCM
Trigger: CATGCACAGGACCTTCAACAAGAAGCTAATGAATTG...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCCAATTCATTAGCTTCTaGTTGAAGGTCCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFAQFISF*LKVLCM
Trigger: CATGCACAGGACCTTCAACAAGAAGCTAATGAATTG...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAGACTCTGCCTTTGCTaGCAGTTCTCTGGCTTGATT +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRRLCLC*QFSGLI
Trigger: AATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAAGATTCTGTGACCAGTaGGTTAGATTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRRFCDQ*VRLLAM
Trigger: CATGGCCAACAATCTAACCAACTGGTCACAGAATCT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGACCCATATACTCTTTTTaGGCGTTTTTGCTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRPIYSF*AFLLPR
Trigger: CCTCGGAAGCAAAAACGCCAAAAAAGAGTATATGGG...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCAGGAGAATAAGGCCGTaGTCAGCTGGTGTTCGAACT +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVRRIRP*SAGVRT
Trigger: AGTTCGAACACCAGCTGACAACGGCCTTATTCTCCT...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTAGGAGAATAAGGCCGTaGTCAGCTGGTGTTCGAACT +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPRRIRP*SAGVRT
Trigger: AGTTCGAACACCAGCTGACAACGGCCTTATTCTCCT...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAAAAAACATACTTCCATaGACCATCAGGAGAATAAGG +
Preference number: 5 (lower is better)
Translates to: LMIRLSPVQLDESFHPKEKNILP*TIRRIR
Trigger: CCTTATTCTCCTGATGGTCAATGGAAGTATGTTTTT...TTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCACTATGAAGCTCTGTCCATaGAAATATGCTCTGCGAGAT +
Preference number: 5 (lower is better)
Translates to: VISPVGIACALNTSKFATMKLCP*KYALRD
Trigger: ATCTCGCAGAGCATATTTCAATGGACAGAGCTTCAT...AGTGGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCATGAAGCTCTGTCCATaGAAATATGCTCTGCGAGAT +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFAMKLCP*KYALRD
Trigger: ATCTCGCAGAGCATATTTCAATGGACAGAGCTTCAT...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GTAAGTTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTCTCTGATGCCATTATaGACTTTCACTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: VSLPLLQLLSIADTLDSRSLMPL*TFTMTC
Trigger: ACAGGTCATAGTGAAAGTCAATAATGGCATCAGAGA...CCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAACTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTCACAGAGACTCTGCTaGGGTGTAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPSQRLC*GVTEVE
Trigger: TTCCACCTCAGTTACACCCAAGCAGAGTCTCTGTGA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCGCTCCCTGTGATCAATaGGTTTTGGATTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVAPCDQ*VLDSGV
Trigger: GACCCCTGAATCCAAAACCAATTGATCACAGGGAGC...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTCAATTGTTGTCCATaGCAGACACTTTGGATTCAA +
Preference number: 5 (lower is better)
Translates to: MIRLSPVQLDESFHPKEEFNCCP*QTLWIQ
Trigger: TTGAATCCAAAGTGTCTGCAATGGACAACAATTGAA...CTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTAAGTCCTGTTCAACTCGATGAAAGCTTCCACCCGAAGGAAGAGTTACTGTTCTCAATACAAGTAAGTTaGCCACTCCTTCAATTGTTG +
Preference number: 5 (lower is better)
Translates to: LSPVQLDESFHPKEELLFSIQVS*PLLQLL
Trigger: CAACAATTGAAGGAGTGGCAAACTTACTTGTATTGA...GAACAGTAACTCTTCCTTCGGGTGGAAGCTTTCATCGAGTTGAACAGGACTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTTCCTTCTGAACAAGTaGTCCTTTTCTGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEFLLNK*SFSGGL
Trigger: CAAGCCTCCAGAAAAGGACAACTTGTTCAGAAGGAA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAGTCTGCTCCAGTAAATaGAAGTCCTTCTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRVCSSK*KSFFWN
Trigger: GTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGAC...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTGGGACAGCCCATCATaGTACTGCTTATCTACTGAC +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPWDSPS*YCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTGGGACAGCCCATCATaGTACTGCTTATCTACTGAC +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDWDSPS*YCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCATTGAGCTGGAGATaGCTGAGACAGCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVPLSWR*LRQPLK
Trigger: TTTTAGTGGCTGTCTCAGCAATCTCCAGCTCAATGG...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCCGTATCCTCCTTCTGTaGAAAAGTAAGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFARILLL*KSKFLF
Trigger: AAACAGGAACTTACTTTTCAACAGAAGGAGGATACG...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATGTGATCAATTGGTTTaGGATTCAGGGGTCCAACCA +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRCDQLV*DSGVQP
Trigger: TGGTTGGACCCCTGAATCCAAAACCAATTGATCACA...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGTGTGATCAATTGGTTTaGGATTCAGGGGTCCAACCA +
Preference number: 5 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNECDQLV*DSGVQP
Trigger: TGGTTGGACCCCTGAATCCAAAACCAATTGATCACA...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACAGTAATTTCACCAGTAGGAATTGCGTGTGCTCTCAATACAAGTAAGTTTGCCTCCATTGCAGACACTTaGGATTCAAGGTTAAGAATC +
Preference number: 5 (lower is better)
Translates to: TVISPVGIACALNTSKFASIADT*DSRLRI
Trigger: GATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGA...GGCAAACTTACTTGTATTGAGAGCACACGCAATTCCTACTGGTGAAATTACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp AGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATGAAAGCTTCAATTGTTGTCCATaGCAGACACTTTGGATTCAA +
Preference number: 5 (lower is better)
Translates to: RNIRSLMIRLSPVQLDESFNCCP*QTLWIQ
Trigger: TTGAATCCAAAGTGTCTGCAATGGACAACAATTGAA...GCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAATAAGACTAGTTGTGTaGCAGGTATGTGGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRIRLVV*QVCGEH
Trigger: GTGCTCTCCACATACCTGCAACACAACTAGTCTTAT...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS TCA 90 bp CAAACTACAATGATTTGTACCTCATGGTATTTTGCATCATTAATTTaGGCTTTCTTTAACGTATCTTCAAGATGCACAGGGCCACCGCTG +
Preference number: 5 (lower is better)
Translates to: QTTMICTSWYFASLI*AFFNVSSRCTGPPL
Trigger: CAGCGGTGGCCCTGTGCATCTTGAAGATACGTTAAAGAAAGCTCAAATTAATGATGCAAAATACCATGAGGTACAAATCATTGTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519245.1
CDS CCA 90 bp CTGCTGAAATTGAATTACCACAGAGATTTCAAGGATTATTCTCACTaGCCTAACATGCTGTTTTCAGTGCTTCATTCCAAATTCCCATCA +
Preference number: 5 (lower is better)
Translates to: LLKLNYHRDFKDYSH*PNMLFSVLHSKFPS
Trigger: TGATGGGAATTTGGAATGAAGCACTGAAAACAGCATGTTAGGCCAGTGAGAATAATCCTTGAAATCTCTGTGGTAATTCAATTTCAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS-3UTR CAA 90 bp GCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: ATPSIVVHCRHFGFKVKNVFSAL*ICIFLR
Trigger: CCTAAGAAAGATACAAATCAACAATGCTGAGAACAC...ATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTTCCTTCTGAACAAGTaGTCCTTTTCTGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVFLLNK*SFSGGL
Trigger: CAAGCCTCCAGAAAAGGACAACTTGTTCAGAAGGAA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATTTCCTTCTGAACAAGTaGTCCTTTTCTGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDFLLNK*SFSGGL
Trigger: CAAGCCTCCAGAAAAGGACAACTTGTTCAGAAGGAA...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp ACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACTTGTAGTTCACTTTaGGCTCCATCTATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TPSIVVHCRHFGFKVKNPTCSSL*APSISA
Trigger: TGCAGAAATAGATGGAGCCAAAAGTGAACTACAAGT...TGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGAACTTGTAGTTCACTTTaGGCTCCATCTATTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRTCSSL*APSISA
Trigger: TGCAGAAATAGATGGAGCCAAAAGTGAACTACAAGT...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCAAACATCATGGAGACTaGGATCTTGCTGGCAACACT +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVKHHGD*DLAGNT
Trigger: AGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTAAACATCATGGAGACTaGGATCTTGCTGGCAACACT +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPKHHGD*DLAGNT
Trigger: AGTGTTGCCAGCAAGATCCAAGTCTCCATGATGTTT...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCCATATACTCTTTTTaGGCGTTTTTGCTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVPIYSF*AFLLPR
Trigger: CCTCGGAAGCAAAAACGCCAAAAAAGAGTATATGGG...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTCCCATATACTCTTTTTaGGCGTTTTTGCTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPPIYSF*AFLLPR
Trigger: CCTCGGAAGCAAAAACGCCAAAAAAGAGTATATGGG...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTTGCCACTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAAAAACATACTTCCATaGACCATCAGGAGAATAAGG +
Preference number: 5 (lower is better)
Translates to: FATPSIVVHCRHFGFKVKKNILP*TIRRIR
Trigger: CCTTATTCTCCTGATGGTCAATGGAAGTATGTTTTT...CTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAGTGGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGATGAAGCTCTGTCCATaGAAATATGCTCTGCGAGAT +
Preference number: 5 (lower is better)
Translates to: SIVVHCRHFGFKVKNPNEMKLCP*KYALRD
Trigger: ATCTCGCAGAGCATATTTCAATGGACAGAGCTTCAT...CTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp CTCCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAACGTATCCTCCTTCTGTaGAAAAGTAAGTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LLQLLSIADTLDSRLRIQRILLL*KSKFLF
Trigger: AAACAGGAACTTACTTTTCAACAGAAGGAGGATACG...TTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp AGAAATAAGAAATATCCGGTCCCTGATGATTCGTTTAAGTCCTGTTCAACTCGATCTCTGATGCCATTATaGACTTTCACTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: RNKKYPVPDDSFKSCSTRSLMPL*TFTMTC
Trigger: ACAGGTCATAGTGAAAGTCAATAATGGCATCAGAGA...TCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGGATATTTCTTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTATGTGGAGAGCACACTTaGTTTTTGAGACAGGATCTC +
Preference number: 5 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVCGEHT*FLRQDL
Trigger: GAGATCCTGTCTCAAAAACAAAGTGTGCTCTCCACA...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CAA 90 bp ACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTTCATTATCCATGCTCTaGACATGCCTTCTGTCAACT +
Preference number: 5 (lower is better)
Translates to: TLDSRLRIQMRNKKYPVPSLSML*TCLLST
Trigger: AGTTGACAGAAGGCATGTCAAGAGCATGGATAATGA...AGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp TTGAAGGTGAACAAGGCAGATACAGAGGTCTTATATGCCTTCAAGATAAAAGCATGTATACTCTATATTTaGTGGCTGAATGGCTTAGGT +
Preference number: 5 (lower is better)
Translates to: LKVNKADTEVLYAFKIKACILYI*WLNGLG
Trigger: ACCTAAGCCATTCAGCCACAAAATATAGAGTATACA...TGCTTTTATCTTGAAGGCATATAAGACCTCTGTATCTGCCTTGTTCACCTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS-3UTR CAA 90 bp CAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: QLLSIADTLDSRLRIQMRVFSAL*ICIFLR
Trigger: CCTAAGAAAGATACAAATCAACAATGCTGAGAACAC...TCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
CDS-3UTR CAA 90 bp CCTTCAATTGTTGTCCATTGCAGACACTTTGGATTCAAGGTTAAGAATCCAAATAAAAACATACTTCCATaGACCATCAGGAGAATAAGG +
Preference number: 5 (lower is better)
Translates to: PSIVVHCRHFGFKVKNPNKNILP*TIRRIR
Trigger: CCTTATTCTCCTGATGGTCAATGGAAGTATGTTTTT...ATTTGGATTCTTAACCTTGAATCCAAAGTGTCTGCAATGGACAACAATTGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS-3UTR CAA 90 bp GACACTTTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCTCTCTGATGCCATTATaGACTTTCACTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: DTLDSRLRIQMRNKKYPVSLMPL*TFTMTC
Trigger: ACAGGTCATAGTGAAAGTCAATAATGGCATCAGAGA...GACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAAAGTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS-3UTR CAA 90 bp CCTACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGTCAATACAAGTAAGTTaGCCACTCCTTCAATTGTTG +
Preference number: 5 (lower is better)
Translates to: PTVFAVISSMIPIEHTIMSIQVS*PLLQLL
Trigger: CAACAATTGAAGGAGTGGCAAACTTACTTGTATTGA...CATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CAA 90 bp ACTGTTTTTGCTGTGATATCCTCAATGATTCCCATAGAACACACAATAATGGTACTTGTTGTTGATCTCTaGGATTTTATCCCTCATATC +
Preference number: 5 (lower is better)
Translates to: TVFAVISSMIPIEHTIMVLVVDL*DFIPHI
Trigger: GATATGAGGGATAAAATCCAAGAGATCAACAACAAG...TACCATTATTGTGTGTTCTATGGGAATCATTGAGGATATCACAGCAAAAACAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230538.12
CDS-3UTR CAA 90 bp TTGGATTCAAGGTTAAGAATCCAAATGAGAAATAAGAAATATCCGGTCCCTGATAAAAACATACTTCCATaGACCATCAGGAGAATAAGG +
Preference number: 5 (lower is better)
Translates to: LDSRLRIQMRNKKYPVPDKNILP*TIRRIR
Trigger: CCTTATTCTCCTGATGGTCAATGGAAGTATGTTTTT...ATCAGGGACCGGATATTTCTTATTTCTCATTTGGATTCTTAACCTTGAATCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000522006.5
ENST00000651860.1
CDS CCA 72 bp GCCCGCGGGGGCGCAGGTGCCCCAGCAGGGTGGCAATaGCAGGGACACTGTACCTCGGCCGCAGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: ARGGAGAPAGWQ*QGHCTSAAGGR
Trigger: CCTGCCGCCTGCGGCCGAGGTACAGTGTCCCTGCCATTGCCACCCTGCTGGGGCACCTGCGCCCCCGCGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368638.5
ENST00000453937.2
ENST00000455073.1
CDS CAA 72 bp GCGGCGGCCCCAGAGGATACGCTCAGCACCCCGGATTaGCCTTCCTCGATGGAGAGCGCTGCTAACCGCAGG +
Preference number: 6 (lower is better)
Translates to: AAAPEDTLSTPD*PSSMESAANRR
Trigger: CCTGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAGCGTATCCTCTGGGGCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS GCA 72 bp CGGCGGCCCCAGAGGATACGCTCAGCACCCCGGATTTaGCTTCCTCGATGGAGAGCGCTGCTAACCGCAGGT +
Preference number: 6 (lower is better)
Translates to: RRPQRIRSAPRI*LPRWRALLTAG
Trigger: ACCTGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAGCGTATCCTCTGGGGCCGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS CCA 72 bp GCGCTAGGCCACCTCCTCTCCCTGGCCGTTCGGGACTaGGGACTGCGCTGTCCTGGCTTCCTTCTCACATTC +
Preference number: 6 (lower is better)
Translates to: ALGHLLSLAVRD*GLRCPGFLLTF
Trigger: GAATGTGAGAAGGAAGCCAGGACAGCGCAGTCCCCAGTCCCGAACGGCCAGGGAGAGGAGGTGGCCTAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453937.2
ENST00000522006.5
CDS TCA 72 bp CCGAGCGCCAGGCTGAGCTCAAAGCCATTTCTCCGCTaGCATCCAGTAGTGCTCTTCCAGGGCTCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: PSARLSSKPFLR*HPVVLFQGSGA
Trigger: AGCGCCCGAGCCCTGGAAGAGCACTACTGGATGTCAGCGGAGAAATGGCTTTGAGCTCAGCCTGGCGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230538.12
ENST00000243219.7
ENST00000368638.5
ENST00000389463.9
ENST00000424408.6
ENST00000431543.6
ENST00000453937.2
ENST00000455073.1
ENST00000519932.5
ENST00000521398.5
ENST00000521690.1
ENST00000522006.5
CDS GCA 72 bp GCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGAGT +
Preference number: 6 (lower is better)
Translates to: AAVPRLFSLLSV*SIPRWLRNQQS
Trigger: ACTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000368638.5
ENST00000389463.9
ENST00000431543.6
CDS GCA 72 bp GTCGTCCTGTTGGCTTCCTCGGTGATCAGTCTAGACTaGCCCAGGCGCTGCTGGGCATCCCCTCTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: VVLLASSVISLD*PRRCWASPLSA
Trigger: AGCAGAGAGAGGGGATGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCACCGAGGAAGCCAACAGGACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS GCA 72 bp GCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: AAVPRLFSLLSV*SIPRWLRNQQL
Trigger: AAGCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424408.6
ENST00000455073.1
ENST00000519932.5
ENST00000521398.5
CDS GCA 72 bp GCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: AAVPRLFSLLSV*SIPRWLRNQQR
Trigger: TCTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453937.2
ENST00000522006.5
CDS GCA 72 bp GAGTGTCCGCTGTACCTCATGGTCCCGCTGCCTGGCTaGTGTGGCCCTGTTCATGTCTTCGGCATCCCTGAC +
Preference number: 6 (lower is better)
Translates to: ECPLYLMVPLPG*CGPVHVFGIPD
Trigger: GTCAGGGATGCCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGGTACAGCGGACACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS GCA 72 bp CCACGCGGGGTTCGCTCGTCTCAGGCGGGTCTTGCCTaGCAACCGCTGAGCTCCCTTCAATGTCAAAAGGAA +
Preference number: 6 (lower is better)
Translates to: PRGVRSSQAGLA*QPLSSLQCQKE
Trigger: TTCCTTTTGACATTGAAGGGAGCTCAGCGGTTGGCAGGCAAGACCCGCCTGAGACGAGCGAACCCCGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230538.12
ENST00000243219.7
ENST00000368638.5
ENST00000389463.9
ENST00000424408.6
ENST00000431543.6
ENST00000453937.2
ENST00000455073.1
ENST00000519932.5
ENST00000521398.5
ENST00000521690.1
ENST00000522006.5
CDS GCA 72 bp AGAGCCACGCGGGGTTCGCTCGTCTCAGGCGGGTCTTaGCTGCCAACCGCTGAGCTCCCTTCAATGTCAAAA +
Preference number: 6 (lower is better)
Translates to: RATRGSLVSGGS*LPTAELPSMSK
Trigger: TTTTGACATTGAAGGGAGCTCAGCGGTTGGCAGGCAAGACCCGCCTGAGACGAGCGAACCCCGCGTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000230538.12
ENST00000243219.7
ENST00000368638.5
ENST00000389463.9
ENST00000424408.6
ENST00000431543.6
ENST00000453937.2
ENST00000455073.1
ENST00000519932.5
ENST00000521398.5
ENST00000521690.1
ENST00000522006.5
CDS GCA 72 bp GCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGTTT +
Preference number: 6 (lower is better)
Translates to: AAVPRLFSLLSV*SIPRWLRNQQF
Trigger: AAACTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243219.7
CDS GCA 72 bp GCGGCGGTGCCTCGCTTATTTTCCCTCCTCTCCGTGTaGAGTATCCCGAGGTGGCTGCGCAACCAGCAGATA +
Preference number: 6 (lower is better)
Translates to: AAVPRLFSLLSV*SIPRWLRNQQI
Trigger: TATCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAAGCGAGGCACCGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS GCA 72 bp AGTCATCCAGCTGCTCCAGGACGACAGGAAACAGAGTaGGGGTCTCATTGTGCAGCCGCTGCCAGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: SHPAAPGRQETE*GSHCAAAASSQ
Trigger: CTGAGAGCTGGCAGCGGCTGCACAATGAGACCCGCACTCTGTTTCCTGTCGTCCTGGAGCAGCTGGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS GCA 72 bp TTTCCCTCCTCTCCGTGTGCAGTATCCCGAGGTGGCTaGGCAACCAGCAGAGTACGGCATCAAAAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: FPSSPCAVSRGG*ATSRVRHQKAD
Trigger: GTCTGCCTTTTGATGCCGTACTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000368638.5
ENST00000389463.9
ENST00000431543.6
CDS CCA 72 bp AGGATACGCTCAGCACCCCGGATTTGCCTTCCTCGATaGAGAGCGCTGCTAACCGCAGGTCATCAGTCAGGT +
Preference number: 6 (lower is better)
Translates to: RIRSAPRICLPR*RALLTAGHQSG
Trigger: ACCTGACTGATGACCTGCGGTTAGCAGCGCTCTCCATCGAGGAAGGCAAATCCGGGGTGCTGAGCGTATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS CCA 72 bp TTATTTTCCCTCCTCTCCGTGTGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGCTTCTACTCCCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: LFSLLSVCSIPR*LRNQQLLLPGP
Trigger: AGGGCCTGGGAGTAGAAGCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455073.1
ENST00000519932.5
CDS GCA 72 bp TCTTTCCTGTTGTTTCTCATGGTCCCGCTGCCTGGCTaGTGTGGCCCTGTTCATGTCTTCGGCATCCCTGAC +
Preference number: 6 (lower is better)
Translates to: SFLLFLMVPLPG*CGPVHVFGIPD
Trigger: GTCAGGGATGCCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGAAACAACAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS GCA 72 bp GGCGTTTTTGCTTCCGAGGTACAGGATAAACTGATCTaGAGTCTCGGTCAGTTCCGGCCGCTTCACAGGGGG +
Preference number: 6 (lower is better)
Translates to: GVFASEVQDKLI*SLGQFRPLHRG
Trigger: CCCCCTGTGAAGCGGCCGGAACTGACCGAGACTGCAGATCAGTTTATCCTGTACCTCGGAAGCAAAAACGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS GCA 72 bp GCTTCCTCGGTGATCAGTCTAGACTGCCCCAGGCGCTaGTGGGCATCCCCTAATCCTTCCTTGAAGGTTTAC +
Preference number: 6 (lower is better)
Translates to: ASSVISLDCPRR*WASPNPSLKVY
Trigger: GTAAACCTTCAAGGAAGGATTAGGGGATGCCCAGCAGCGCCTGGGGCAGTCTAGACTGATCACCGAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523765.1
CDS CCA 72 bp TCACTCTTTCCTGTTGTTTCTCATGGTCCCGCTGCCTaGCTGCTGTGGCCCTGTTCATGTCTTCGGCATCCC +
Preference number: 6 (lower is better)
Translates to: SLFPVVSHGPAA*LLWPCSCLRHP
Trigger: GGGATGCCGAAGACATGAACAGGGCCACAGCAGCCAGGCAGCGGGACCATGAGAAACAACAGGAAAGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS CAA 90 bp TTCCGCTGGCAGTGCACACAGTATCCTGAGCCGTCCAAACACTCGTaGGAATTGCCATTACAGTCGCAGGGCACACATTCTCCCGACAGG +
Preference number: 6 (lower is better)
Translates to: FRWQCTQYPEPSKHS*ELPLQSQGTHSPDR
Trigger: CCTGTCGGGAGAATGTGTGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTTGGACGGCTCAGGATACTGTGTGCACTGCCAGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000423735.2
ENST00000424408.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS TCA 72 bp TTACAGTCGCAGGGCACACATTCTCCCGACAGGGTGTaGAAGAATCCAGCATTGCATTTCTCGGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: LQSQGTHSPDRV*KNPALHFSAAG
Trigger: GCCTGCGGCCGAGAAATGCAATGCTGGATTCTTTCACACCCTGTCGGGAGAATGTGTGCCCTGCGACTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000243219.7
ENST00000389463.9
ENST00000424408.6
ENST00000431543.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
CDS TCA 72 bp AGCCATCGAAGAAGTAACTGGCAGCCCGACTCTGAGTaGAGGCCAGCTTATCTCGGGCACATGGCACTGATG +
Preference number: 6 (lower is better)
Translates to: SHRRSNWQPDSE*RPAYLGHMALM
Trigger: CATCAGTGCCATGTGCCCGAGATAAGCTGGCCTTCACTCAGAGTCGGGCTGCCAGTTACTTCTTCGATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS TCA 72 bp GTGGACCACCAAGTACTTGGTGCAGGCTCCATTTGCTaGGGTGCAGAAAGGGTTAAGTCCAGGGGTGGGACT +
Preference number: 6 (lower is better)
Translates to: VDHQVLGAGSIC*GAERVKSRGGT
Trigger: AGTCCCACCCCTGGACTTAACCCTTTCTGCACCTCAGCAAATGGAGCCTGCACCAAGTACTTGGTGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518842.1
CDS TCA 72 bp GGGATTCCAGGGCAGGAACCAAAGGTAGATGATCTCTaGAGGCAGAGGGTCAGGGTGCCCACTTTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: GIPGQEPKVDDL*RQRVRVPTFLS
Trigger: GCTCAAGAAAGTGGGCACCCTGACCCTCTGCCTTCAGAGATCATCTACCTTTGGTTCCTGCCCTGGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS CCA 72 bp TTATTTTCCCTCCTCTCCGTGTGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGAGTACGGCATCAAAAGGC +
Preference number: 6 (lower is better)
Translates to: LFSLLSVCSIPR*LRNQQSTASKG
Trigger: GCCTTTTGATGCCGTACTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000368638.5
ENST00000389463.9
ENST00000431543.6
CDS CCA 72 bp TTATTTTCCCTCCTCTCCGTGTGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGAGATGGACGGAGCTTACA +
Preference number: 6 (lower is better)
Translates to: LFSLLSVCSIPR*LRNQQRWTELT
Trigger: TGTAAGCTCCGTCCATCTCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453937.2
ENST00000522006.5
CDS GCA 72 bp TTTCCCTCCTCTCCGTGTGCAGTATCCCGAGGTGGCTaGGCAACCAGCAGCTTAGGAAATAAAGGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: FPSSPCAVSRGG*ATSSLGNKGKV
Trigger: CACTTTCCCTTTATTTCCTAAGCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424408.6
ENST00000521398.5
CDS CCA 72 bp ACCTTCTTCCAAGCATTCTCCGGTTACACTGTCACATaGGCCTCCCCCGCAGTTGCACACTGCACAGTTCTT +
Preference number: 6 (lower is better)
Translates to: TFFQAFSGYTVT*ASPAVAHCTVL
Trigger: AAGAACTGTGCAGTGTGCAACTGCGGGGGAGGCCCATGTGACAGTGTAACCGGAGAATGCTTGGAAGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000518842.1
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS CCA 72 bp CTGGTCATGACAGTGAGCTACAAGAAGTGTTCATGTTaGAGCCCTGGCTTCTCTGGCTCCCTGAGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: LVMTVSYKKCSC*SPGFSGSLRAE
Trigger: CTCAGCTCTCAGGGAGCCAGAGAAGCCAGGGCTCCAACATGAACACTTCTTGTAGCTCACTGTCATGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS CAA 90 bp TCTCCGTCAGTAGTCACACAGTATCCTGAGCCGTCCAAACACTCGTaGGAATTGCCATTACAGTCGCAGGGCACACATTCTCCCGACAGG +
Preference number: 6 (lower is better)
Translates to: SPSVVTQYPEPSKHS*ELPLQSQGTHSPDR
Trigger: CCTGTCGGGAGAATGTGTGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTTGGACGGCTCAGGATACTGTGTGACTACTGACGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431543.6
CDS TCA 72 bp CGTCCCCATAGTAGCCAGGAGCGCAACGTTCACACTTaGATCCGGTGGTGTTGCGTAAGCAATTCCTACACT +
Preference number: 6 (lower is better)
Translates to: RPHSSQERNVHT*IRWCCVSNSYT
Trigger: AGTGTAGGAATTGCTTACGCAACACCACCGGATTCAAGTGTGAACGTTGCGCTCCTGGCTACTATGGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000518842.1
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS TCA 72 bp TGGAAAAGGGATTCCAGGGCAGGAACCAAAGGTAGATaGTCTCTGAAGGCAGAGGGTCAGGGTGCCCACTTT +
Preference number: 6 (lower is better)
Translates to: WKRDSRAGTKGR*SLKAEGQGAHF
Trigger: AAAGTGGGCACCCTGACCCTCTGCCTTCAGAGATCATCTACCTTTGGTTCCTGCCCTGGAATCCCTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS GCA 72 bp CACAGTATCCTGAGCCGTCCAAACACTCGTTGGAATTaGCATTACAGTCGCAGGGCACACATTCTCCCGACA +
Preference number: 6 (lower is better)
Translates to: HSILSRPNTRWN*HYSRRAHILPT
Trigger: TGTCGGGAGAATGTGTGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTTGGACGGCTCAGGATACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000423735.2
ENST00000424408.6
ENST00000431543.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS GCA 72 bp GCCCCTCTTGATGCTGGCGGCTGTGAATACATGCATTaGTTGAAGCGGACACATGACCACTACCAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: APLDAGGCEYMH*LKRTHDHYQFS
Trigger: TGAGAACTGGTAGTGGTCATGTGTCCGCTTCAAGCAATGCATGTATTCACAGCCGCCAGCATCAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 72 bp CGCAACCAGCAGTTTTTCTCCTTCCCGCAGAGGTTCTaGCTCAAGAACCTACAGATGGACGGAGCTTACAGT +
Preference number: 6 (lower is better)
Translates to: RNQQFFSFPQRF*LKNLQMDGAYS
Trigger: ACTGTAAGCTCCGTCCATCTGTAGGTTCTTGAGCCAGAACCTCTGCGGGAAGGAGAAAAACTGCTGGTTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243219.7
CDS CAA 72 bp ACACAGTATCCTGAGCCGTCCAAACACTCGTTGGAATaGCCATTACAGTCGCAGGGCACACATTCTCCCGAC +
Preference number: 6 (lower is better)
Translates to: TQYPEPSKHSLE*PLQSQGTHSPD
Trigger: GTCGGGAGAATGTGTGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTTGGACGGCTCAGGATACTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000423735.2
ENST00000424408.6
ENST00000431543.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS CAA 90 bp CTCATCTGCCTCCTCATCCACGAGCTCCCGTTGGGTGAAAAATGGTaGACGGCTTCTAATCTCTTCAAGCATCTTCTGGGCCAACACCAG +
Preference number: 6 (lower is better)
Translates to: LICLLIHELPLGEKW*TASNLFKHLLGQHQ
Trigger: CTGGTGTTGGCCCAGAAGATGCTTGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCGTGGATGAGGAGGCAGATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS CAA 90 bp CAGAGAGTCCGCAGATGTGCTCAGAGACATGTTCACCACTTCCATTaGTTCCCTCACTCTTTCCTGTTGTTTCTCATGGTCCCGCTGCCT +
Preference number: 6 (lower is better)
Translates to: QRVRRCAQRHVHHFH*FPHSFLLFLMVPLP
Trigger: AGGCAGCGGGACCATGAGAAACAACAGGAAAGAGTGAGGGAACAAATGGAAGTGGTGAACATGTCTCTGAGCACATCTGCGGACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS TCA 72 bp TCCTCATCCACGAGCTCCCGTTGGGTGAAAAATGGTTaGCGGCTTCTAATCTCTTCAAGCATCTTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SSSTSSRWVKNG*RLLISSSIFWA
Trigger: GGCCCAGAAGATGCTTGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCGTGGATGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS GCA 72 bp GTCAGCCACTGCTTCATCACTGCTAGACTCTGCCTTTaGTTGCAGTTCTCTGGCTTGATTGAGGAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: VSHCFITARLCL*LQFSGLIEEVL
Trigger: GAGAACCTCCTCAATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGATGAAGCAGTGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CCA 72 bp AGTGCACACAGTATCCTGAGCCGTCCAAACACTCGTTaGAATTGCCATTACAGTCGCAGGGCACACATTCTC +
Preference number: 6 (lower is better)
Translates to: SAHSILSRPNTR*NCHYSRRAHIL
Trigger: GAGAATGTGTGCCCTGCGACTGTAATGGCAATTCCAACGAGTGTTTGGACGGCTCAGGATACTGTGTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000423735.2
ENST00000424408.6
ENST00000519932.5
ENST00000521398.5
ENST00000522006.5
ENST00000524032.5
CDS CCA 72 bp ATTTGCCCTAGGGAATCAAGTGGACCACCAAGTACTTaGTGCAGGCTCCATTTGCTGAGGTGCAGAAAGGGT +
Preference number: 6 (lower is better)
Translates to: ICPRESSGPPST*CRLHLLRCRKG
Trigger: ACCCTTTCTGCACCTCAGCAAATGGAGCCTGCACCAAGTACTTGGTGGTCCACTTGATTCCCTAGGGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518842.1
CDS CCA 72 bp GAGGTGGCTGCGCAACCAGCAGATAGATATTTTATGTaGCCCCCGCTAGTTTGCAGGAAAGTGGGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: EVAAQPADRYFM*PPLVCRKVGGK
Trigger: TTTTCCACCCACTTTCCTGCAAACTAGCGGGGGCCACATAAAATATCTATCTGCTGGTTGCGCAGCCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS CCA 72 bp GCAGACCTTGAAATGCACCATGCTTCCAGTGGCTCCTaGGTGGTCCAACCACTGCTGAAATTGAATTACCAC +
Preference number: 6 (lower is better)
Translates to: ADLEMHHASSGS*VVQPLLKLNYH
Trigger: GTGGTAATTCAATTTCAGCAGTGGTTGGACCACCCAGGAGCCACTGGAAGCATGGTGCATTTCAAGGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 72 bp ATCCTCCTCACCTTCCTCTTTGCATTTGCATGGCCTTaGCAATTAGTCTCCTTATCCCTGCAGCTGCTGACC +
Preference number: 6 (lower is better)
Translates to: ILLTFLFAFAWP*QLVSLSLQLLT
Trigger: GGTCAGCAGCTGCAGGGATAAGGAGACTAATTGCCAAGGCCATGCAAATGCAAAGAGGAAGGTGAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CAA 72 bp CTCCTCATCCACGAGCTCCCGTTGGGTGAAAAATGGTaGACGGCTTCTAATCTCTTCAAGCATCTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: LLIHELPLGEKW*TASNLFKHLLG
Trigger: GCCCAGAAGATGCTTGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCGTGGATGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS CAA 72 bp CCTCTTGATGCTGGCGGCTGTGAATACATGCATTGCTaGAAGCGGACACATGACCACTACCAGTTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: PLDAGGCEYMHC*KRTHDHYQFSA
Trigger: AGCTGAGAACTGGTAGTGGTCATGTGTCCGCTTCAAGCAATGCATGTATTCACAGCCGCCAGCATCAAGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS TCA 72 bp TTTTTGGCGTTTTTGCTTCCGAGGTACAGGATAAACTaGTCTGCAGTCTCGGTCAGTTCCGGCCGCTTCACA +
Preference number: 6 (lower is better)
Translates to: FLAFLLPRYRIN*SAVSVSSGRFT
Trigger: TGTGAAGCGGCCGGAACTGACCGAGACTGCAGATCAGTTTATCCTGTACCTCGGAAGCAAAAACGCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS TCA 72 bp CTCTTGATGCTGGCGGCTGTGAATACATGCATTGCTTaGAGCGGACACATGACCACTACCAGTTCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LLMLAAVNTCIA*SGHMTTTSSQL
Trigger: AAGCTGAGAACTGGTAGTGGTCATGTGTCCGCTTCAAGCAATGCATGTATTCACAGCCGCCAGCATCAAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS TCA 72 bp TCTATCCACCCTGGTAAAGTAGGCATTACTTGTGGGTaGGACAGAGCTAATGACGAAGTGGGACAGCCCATC +
Preference number: 6 (lower is better)
Translates to: SIHPGKVGITCG*DRANDEVGQPI
Trigger: GATGGGCTGTCCCACTTCGTCATTAGCTCTGTCTCACCCACAAGTAATGCCTACTTTACCAGGGTGGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651860.1
CDS GCA 72 bp GAGTTAGACGAGGTGTTGTCAGAGAGTCCGCAGATGTaGTCAGAGACATGTTCACCACTTCCATTTGTTCCC +
Preference number: 6 (lower is better)
Translates to: ELDEVLSESPQM*SETCSPLPFVP
Trigger: GGGAACAAATGGAAGTGGTGAACATGTCTCTGAGCACATCTGCGGACTCTCTGACAACACCTCGTCTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS GCA 72 bp CCTTCTTGGTGTACCATCACACTGCTGATGCTGAAATaGATTGATGGTGAGTGTCCGCTGTACCTCATGGTC +
Preference number: 6 (lower is better)
Translates to: PSWCTITLLMLK*IDGECPLYLMV
Trigger: GACCATGAGGTACAGCGGACACTCACCATCAATGCATTTCAGCATCAGCAGTGTGATGGTACACCAAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 72 bp TGCCTCCTCATCCACGAGCTCCCGTTGGGTGAAAAATaGTTGACGGCTTCTAATCTCTTCAAGCATCTTCTG +
Preference number: 6 (lower is better)
Translates to: CLLIHELPLGEK*LTASNLFKHLL
Trigger: CAGAAGATGCTTGAAGAGATTAGAAGCCGTCAACCATTTTTCACCCAACGGGAGCTCGTGGATGAGGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS CCA 72 bp TCCCTCTTTCACTTTTTCTCCTTCCCGCAGAGGTTCTaGCTCAAGAACCTACAGATGGACGGAGCTTACAGT +
Preference number: 6 (lower is better)
Translates to: SLFHFFSFPQRF*LKNLQMDGAYS
Trigger: ACTGTAAGCTCCGTCCATCTGTAGGTTCTTGAGCCAGAACCTCTGCGGGAAGGAGAAAAAGTGAAAGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424408.6
ENST00000521398.5
CDS CCA 72 bp TTATTTTCCCTCCTCTCCGTGTGCAGTATCCCGAGGTaGCTGCGCAACCAGCAGATAGATATTTTATGTGGC +
Preference number: 6 (lower is better)
Translates to: LFSLLSVCSIPR*LRNQQIDILCG
Trigger: GCCACATAAAATATCTATCTGCTGGTTGCGCAGCCACCTCGGGATACTGCACACGGAGAGGAGGGAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521690.1
CDS CAA 72 bp AGCCACTGCTTCATCACTGCTAGACTCTGCCTTTGCTaGCAGTTCTCTGGCTTGATTGAGGAGGTTCTCACT +
Preference number: 6 (lower is better)
Translates to: SHCFITARLCLC*QFSGLIEEVLT
Trigger: AGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGATGAAGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CAA 72 bp TTCAAACTCTTGGCGGCTGTTGGCTGTTCCTCCATATaGATAGGCGTGCTCTATTGCTCTAGGGCTGTTGGA +
Preference number: 6 (lower is better)
Translates to: FKLLAAVGCSSI*IGVLYCSRAVG
Trigger: TCCAACAGCCCTAGAGCAATAGAGCACGCCTATCAATATGGAGGAACAGCCAACAGCCGCCAAGAGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000604740.5
ENST00000651860.1
CDS CAA 72 bp AATCCTCCTCACCTTCCTCTTTGCATTTGCATGGCCTaGGCAATTAGTCTCCTTATCCCTGCAGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: NPPHLPLCICMA*AISLLIPAAAD
Trigger: GTCAGCAGCTGCAGGGATAAGGAGACTAATTGCCAAGGCCATGCAAATGCAAAGAGGAAGGTGAGGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CAA 90 bp AAGTCCTTCTTTTGGAACTGGAAGCCCTTCATGCATCCTCTGAAGTaGATATCTAGGGGAAGGTGTGCTCTGAGGGCCCTGGATTGTAAG +
Preference number: 6 (lower is better)
Translates to: KSFFWNWKPFMHPLK*ISRGRCALRALDCK
Trigger: CTTACAATCCAGGGCCCTCAGAGCACACCTTCCCCTAGATATCAACTTCAGAGGATGCATGAAGGGCTTCCAGTTCCAAAAGAAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS TCA 72 bp CTGAGTGAAGGCCAGCTTATCTCGGGCACATGGCACTaGTGTGGAGGGGTCCATATTATAGATGTGCTTAAA +
Preference number: 6 (lower is better)
Translates to: LSEGQLISGTWH*CGGVHIIDVLK
Trigger: TTTAAGCACATCTATAATATGGACCCCTCCACATCAGTGCCATGTGCCCGAGATAAGCTGGCCTTCACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS TCA 72 bp GCTGGTGTTCGAACTTCTATGTCAAAGCGAGTCACCTaGCCAAATTTCCCTCTCCTTGTGATGTCTCTCACC +
Preference number: 6 (lower is better)
Translates to: AGVRTSMSKRVT*PNFPLLVMSLT
Trigger: GGTGAGAGACATCACAAGGAGAGGGAAATTTGGTCAGGTGACTCGCTTTGACATAGAAGTTCGAACACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000519245.1
ENST00000522006.5
ENST00000651860.1
CDS TCA 72 bp TGCTCTATTGCTCTAGGGCTGTTGGAAAGGTGGCAATaGGAGTTTCTTGGAGTATTCCGCTCTGGGAGTTTC +
Preference number: 6 (lower is better)
Translates to: CSIALGLLERWQ*EFLGVFRSGSF
Trigger: GAAACTCCCAGAGCGGAATACTCCAAGAAACTCTCATTGCCACCTTTCCAACAGCCCTAGAGCAATAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521693.1
ENST00000522006.5
ENST00000604740.5
ENST00000651860.1
CDS GCA 72 bp GTTGGCTGTTCCTCCATATTGATAGGCGTGCTCTATTaGTCTAGGGCTGTTGGAAAGGTGGCAATGAGAGTT +
Preference number: 6 (lower is better)
Translates to: VGCSSILIGVLY*SRAVGKVAMRV
Trigger: AACTCTCATTGCCACCTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTATCAATATGGAGGAACAGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000604740.5
ENST00000651860.1
CDS CCA 72 bp TCCATTGACCATCAGGAGAATAAGGCCGTTGTCAGCTaGTGTTCGAACTTCTATGTCAAAGCGAGTCACCTG +
Preference number: 6 (lower is better)
Translates to: SIDHQENKAVVS*CSNFYVKASHL
Trigger: CAGGTGACTCGCTTTGACATAGAAGTTCGAACACCAGCTGACAACGGCCTTATTCTCCTGATGGTCAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000519245.1
ENST00000522006.5
ENST00000651860.1
CDS CCA 72 bp GTTCTCAGCTTTGTAGGTGTGGGCATGCACGAATTCTaGCCCCATGAGATGACCATCTTTGCAAGCTATGAT +
Preference number: 6 (lower is better)
Translates to: VLSFVGVGMHEF*PHEMTIFASYD
Trigger: ATCATAGCTTGCAAAGATGGTCATCTCATGGGGCCAGAATTCGTGCATGCCCACACCTACAAAGCTGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CAA 72 bp GATGGCACTTGTGTACAAATAACTGCTCAAGCAGATTaGGCTCAGCGTGAATGGAGCTCTTCTCCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: DGTCVQITAQAD*AQREWSSSPRS
Trigger: GCTTCTCGGAGAAGAGCTCCATTCACGCTGAGCCAAATCTGCTTGAGCAGTTATTTGTACACAAGTGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CAA 90 bp CACCATGCTTCCAGTGGCTCCTGGGTGGTCCAACCACTGCTGAAATaGAATTACCACAGAGATTTCAAGGATTATTCTCACTGGCCTAAC +
Preference number: 6 (lower is better)
Translates to: HHASSGSWVVQPLLK*NYHRDFKDYSHWPN
Trigger: GTTAGGCCAGTGAGAATAATCCTTGAAATCTCTGTGGTAATTCAATTTCAGCAGTGGTTGGACCACCCAGGAGCCACTGGAAGCATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS TCA 72 bp CGGTGGTGTTGCGTAAGCAATTCCTACACTGGCCAGTaGCTTCATCACAATCTTCAAAGATCAGGTTGGGAT +
Preference number: 6 (lower is better)
Translates to: RWCCVSNSYTGQ*LHHNLQRSGWD
Trigger: ATCCCAACCTGATCTTTGAAGATTGTGATGAAGTCACTGGCCAGTGTAGGAATTGCTTACGCAACACCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000518842.1
ENST00000521398.5
ENST00000521732.5
ENST00000522006.5
CDS TCA 72 bp AACCAACTCCCAGGGTTTCTGTCTGCTCCAGTAAATTaGAGTCCTTCTTTTGGAACTGGAAGCCCTTCATGC +
Preference number: 6 (lower is better)
Translates to: NQLPGFLSAPVN*SPSFGTGSPSC
Trigger: GCATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGACAGAAACCCTGGGAGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS TCA 72 bp TTGGCTCAGCGTGAATGGAGCTCTTCTCCGAGAAGCTaGTTCCATTCTCTCAACTTGGGAGATTCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: LAQREWSSSPRS*FHSLNLGDSVS
Trigger: TGAAACAGAATCTCCCAAGTTGAGAGAATGGAATCAGCTTCTCGGAGAAGAGCTCCATTCACGCTGAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS GCA 72 bp CACAGAAATGATTCAAGGCTAGGACACCACCCTGTATaGACAGCATGGGCGACATGTACTTACTTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: HRNDSRLGHHPV*TAWATCTYFWD
Trigger: ATCCCAAAAGTAAGTACATGTCGCCCATGCTGTGCATACAGGGTGGTGTCCTAGCCTTGAATCATTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS GCA 72 bp GCTGCTGACCAGCCAGACTGTGAGATTTGCTTATCGTaGCTTTCCAAAAATTATGCATACCCAGAACCCATG +
Preference number: 6 (lower is better)
Translates to: AADQPDCEICLS*LSKNYAYPEPM
Trigger: CATGGGTTCTGGGTATGCATAATTTTTGGAAAGGCACGATAAGCAAATCTCACAGTCTGGCTGGTCAGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 72 bp GCATTACTTGTGGGTGAGACAGAGCTAATGACGAAGTaGGACAGCCCATCATTGTACTGCTTATCTACTGAC +
Preference number: 6 (lower is better)
Translates to: ALLVGETELMTK*DSPSLYCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCACTTCGTCATTAGCTCTGTCTCACCCACAAGTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651860.1
CDS CAA 72 bp CGCAGATGTGCTCAGAGACATGTTCACCACTTCCATTaGTTCCCTCACTCTTTCCTGTTGTTTCTCATGGTC +
Preference number: 6 (lower is better)
Translates to: RRCAQRHVHHFH*FPHSFLLFLMV
Trigger: GACCATGAGAAACAACAGGAAAGAGTGAGGGAACAAATGGAAGTGGTGAACATGTCTCTGAGCACATCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS TCA 72 bp ATTTTATCCCTCATATCATGGGCTTGCTCTACCAGCTaGCTTGCGTGGTTAATGGTGTCCATGCTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: ILSLISWACSTS*LAWLMVSMLSF
Trigger: GAAGGAAAGCATGGACACCATTAACCACGCAAGTCAGCTGGTAGAGCAAGCCCATGATATGAGGGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS TCA 72 bp TGCATCCAAAGCCTTCTGTACCAGCCCGTTCATATCTaGACTGTGCAACTTCCTGCTCAATTCATTAGCTTC +
Preference number: 6 (lower is better)
Translates to: CIQSLLYQPVHI*TVQLPAQFISF
Trigger: GAAGCTAATGAATTGAGCAGGAAGTTGCACAGTTCAGATATGAACGGGCTGGTACAGAAGGCTTTGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS TCA 72 bp TGTACAAATAACTGCTCAAGCAGATTTGGCTCAGCGTaGATGGAGCTCTTCTCCGAGAAGCTGATTCCATTC +
Preference number: 6 (lower is better)
Translates to: CTNNCSSRFGSA*MELFSEKLIPF
Trigger: GAATGGAATCAGCTTCTCGGAGAAGAGCTCCATTCACGCTGAGCCAAATCTGCTTGAGCAGTTATTTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS GCA 72 bp ATGATCACATCTGGGAATCCTCCTCACCTTCCTCTTTaGATTTGCATGGCCTTGGCAATTAGTCTCCTTATC +
Preference number: 6 (lower is better)
Translates to: MITSGNPPHLPL*ICMALAISLLI
Trigger: GATAAGGAGACTAATTGCCAAGGCCATGCAAATGCAAAGAGGAAGGTGAGGAGGATTCCCAGATGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 72 bp TCATATCTTGTGGGTGAGACAGAGCTAATGACGAAGTaGGACAGCCCATCATTGTACTGCTTATCTACTGAC +
Preference number: 6 (lower is better)
Translates to: SYLVGETELMTK*DSPSLYCLSTD
Trigger: GTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCACTTCGTCATTAGCTCTGTCTCACCCACAAGATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
CDS CAA 72 bp GTTGATCTCTTGGATTTTATCCCTCATATCATGGGCTaGCTCTACCAGCTGACTTGCGTGGTTAATGGTGTC +
Preference number: 6 (lower is better)
Translates to: VDLLDFIPHIMG*LYQLTCVVNGV
Trigger: GACACCATTAACCACGCAAGTCAGCTGGTAGAGCAAGCCCATGATATGAGGGATAAAATCCAAGAGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521187.1
ENST00000522006.5
CDS CAA 72 bp TCCAGTGGCTCCTGGGTGGTCCAACCACTGCTGAAATaGAATTACCACAGAGATTTCAAGGATTATTCTCAC +
Preference number: 6 (lower is better)
Translates to: SSGSWVVQPLLK*NYHRDFKDYSH
Trigger: GTGAGAATAATCCTTGAAATCTCTGTGGTAATTCAATTTCAGCAGTGGTTGGACCACCCAGGAGCCACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS TCA 72 bp CTGTGCAACTTCCTGCTCAATTCATTAGCTTCTTGTTaGAGGTCCTGTGCATGGTCAATAGCTTCTTGGACT +
Preference number: 6 (lower is better)
Translates to: LCNFLLNSLASC*RSCAWSIASWT
Trigger: AGTCCAAGAAGCTATTGACCATGCACAGGACCTTCAACAAGAAGCTAATGAATTGAGCAGGAAGTTGCACAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CCA 72 bp AATCTCCTTTTAAGTGTTCAAACTCTTGGCGGCTGTTaGCTGTTCCTCCATATTGATAGGCGTGCTCTATTG +
Preference number: 6 (lower is better)
Translates to: NLLLSVQTLGGC*LFLHIDRRALL
Trigger: CAATAGAGCACGCCTATCAATATGGAGGAACAGCCAACAGCCGCCAAGAGTTTGAACACTTAAAAGGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000604740.5
ENST00000651860.1
CDS CAA 72 bp ACTGTGCAACTTCCTGCTCAATTCATTAGCTTCTTGTaGAAGGTCCTGTGCATGGTCAATAGCTTCTTGGAC +
Preference number: 6 (lower is better)
Translates to: TVQLPAQFISFL*KVLCMVNSFLD
Trigger: GTCCAAGAAGCTATTGACCATGCACAGGACCTTCAACAAGAAGCTAATGAATTGAGCAGGAAGTTGCACAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CAA 72 bp ACTGCTAGACTCTGCCTTTGCTTGCAGTTCTCTGGCTaGATTGAGGAGGTTCTCACTTTCATCTTTATGGTA +
Preference number: 6 (lower is better)
Translates to: TARLCLCLQFSG*IEEVLTFIFMV
Trigger: TACCATAAAGATGAAAGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CAA 72 bp AACATACTTCCATTGACCATCAGGAGAATAAGGCCGTaGTCAGCTGGTGTTCGAACTTCTATGTCAAAGCGA +
Preference number: 6 (lower is better)
Translates to: NILPLTIRRIRP*SAGVRTSMSKR
Trigger: TCGCTTTGACATAGAAGTTCGAACACCAGCTGACAACGGCCTTATTCTCCTGATGGTCAATGGAAGTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000519245.1
ENST00000522006.5
ENST00000651860.1
CDS CAA 90 bp AGGACACCACCCTGTATGCACAGCATGGGCGACATGTACTTACTTTaGGGATTTGAAGGACTGATCTATGGGTTATATTTAAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: RTPPCMHSMGDMYLL*GFEGLIYGLYLRGR
Trigger: TCTTCCTCTTAAATATAACCCATAGATCAGTCCTTCAAATCCCAAAAGTAAGTACATGTCGCCCATGCTGTGCATACAGGGTGGTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS TCA 72 bp GAAGTGGGACAGCCCATCATTGTACTGCTTATCTACTaGCTGAACTTTGATTCCCTTTACATCCATGATGAC +
Preference number: 6 (lower is better)
Translates to: EVGQPIIVLLIY*LNFDSLYIHDD
Trigger: GTCATCATGGATGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS CCA 72 bp GTCTGCTCCAGTAAATTGAAGTCCTTCTTTTGGAACTaGAAGCCCTTCATGCATCCTCTGAAGTTGATATCT +
Preference number: 6 (lower is better)
Translates to: VCSSKLKSFFWN*KPFMHPLKLIS
Trigger: AGATATCAACTTCAGAGGATGCATGAAGGGCTTCCAGTTCCAAAAGAAGGACTTCAATTTACTGGAGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651860.1
CDS CAA 90 bp TGCTTCATCACTGCTAGACTCTGCCTTTGCTTGCAGTTCTCTGGCTaGATTGAGGAGGTTCTCACTTTCATCTTTATGGTAAATGATTTG +
Preference number: 6 (lower is better)
Translates to: CFITARLCLCLQFSG*IEEVLTFIFMVNDL
Trigger: CAAATCATTTACCATAAAGATGAAAGTGAGAACCTCCTCAATCAAGCCAGAGAACTGCAAGCAAAGGCAGAGTCTAGCAGTGATGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CAA 90 bp AATGGGACACTCATAAAGAGAAGTGTGGACCTTTTCAGTATACCGTaGGAAATCTTCAACCTCCACATCTCTATCCACCCTGGTAAAGTA +
Preference number: 6 (lower is better)
Translates to: NGTLIKRSVDLFSIP*EIFNLHISIHPGKV
Trigger: TACTTTACCAGGGTGGATAGAGATGTGGAGGTTGAAGATTTCCAACGGTATACTGAAAAGGTCCACACTTCTCTTTATGAGTGTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000521693.1
ENST00000522006.5
ENST00000604740.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 72 bp TGGGACAGCCCATCATTGTACTGCTTATCTACTGACTaGACTTTGATTCCCTTTACATCCATGATGACAGTA +
Preference number: 6 (lower is better)
Translates to: WDSPSLYCLSTD*TLIPFTSMMTV
Trigger: TACTGTCATCATGGATGTAAAGGGAATCAAAGTTCAGTCAGTAGATAAGCAGTACAATGATGGGCTGTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 72 bp TGTAAACCAAGCGGCCATGGGCCAAAAATAGAGTCATaGAGTCATTCTCTTCTTGATCTGAGACATAGAAGA +
Preference number: 6 (lower is better)
Translates to: CKPSGHGPKIES*SHSLLDLRHRR
Trigger: TCTTCTATGTCTCAGATCAAGAAGAGAATGACTTCATGACTCTATTTTTGGCCCATGGCCGCTTGGTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000651529.1
ENST00000651860.1
CDS TCA 72 bp GCACAGCATGGGCGACATGTACTTACTTTTGGGATTTaGAGGACTGATCTATGGGTTATATTTAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: AQHGRHVLTFGI*RTDLWVIFKRK
Trigger: CTTCCTCTTAAATATAACCCATAGATCAGTCCTTCAAATCCCAAAAGTAAGTACATGTCGCCCATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CAA 72 bp CCCTGTATGCACAGCATGGGCGACATGTACTTACTTTaGGGATTTGAAGGACTGATCTATGGGTTATATTTA +
Preference number: 6 (lower is better)
Translates to: PCMHSMGDMYLL*GFEGLIYGLYL
Trigger: TAAATATAACCCATAGATCAGTCCTTCAAATCCCAAAAGTAAGTACATGTCGCCCATGCTGTGCATACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CAA 72 bp GTATTTGGTTACATGAGTAAGTTCTTTAGTGGTGATTaGTTAGACTTTGGTGCACCCATCACCCGAGCAGTA +
Preference number: 6 (lower is better)
Translates to: VFGYMSKFFSGD*LDFGAPITRAV
Trigger: TACTGCTCGGGTGATGGGTGCACCAAAGTCTAACAAATCACCACTAAAGAACTTACTCATGTAACCAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CAA 90 bp TCCTCTACGTCAGACAGAAGGCTTTTCATCGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGGGCGTATTGGTTTTCTCTTTCTGAC +
Preference number: 6 (lower is better)
Translates to: SSTSDRRLFIVFSAL*ICIFLRAYWFSLSD
Trigger: GTCAGAAAGAGAAAACCAATACGCCCTAAGAAAGATACAAATCAACAATGCTGAGAACACGATGAAAAGCCTTCTGTCTGACGTAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521732.5
ENST00000522006.5
CDS CAA 90 bp CATTCTTTATTATATCATCAAGTTCTGAAAGAGTTAGACGAGGTGTaGTCAGAGAGTCCGCAGATGTGCTCAGAGACATGTTCACCACTT +
Preference number: 6 (lower is better)
Translates to: HSLLYHQVLKELDEV*SESPQMCSETCSPL
Trigger: AAGTGGTGAACATGTCTCTGAGCACATCTGCGGACTCTCTGACAACACCTCGTCTAACTCTTTCAGAACTTGATGATATAATAAAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
CDS CAA 90 bp GGCTTGATTGAGGAGGTTCTCACTTTCATCTTTATGGTAAATGATTaGAGTATCAATCCCACTCACCGCATCATAAATTCGGTCAGTGGT +
Preference number: 6 (lower is better)
Translates to: GLIEEVLTFIFMVND*SINPTHRIINSVSG
Trigger: ACCACTGACCGAATTTATGATGCGGTGAGTGGGATTGATACTCAAATCATTTACCATAAAGATGAAAGTGAGAACCTCCTCAATCAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CAA 90 bp TTCTCTCAACTTGGGAGATTCTGTTTCAGAGATCTCACACAGTATTaGTCAAAAATAATGCCCAACTCAAATGTGGCCTCTGAAGAAAGG +
Preference number: 6 (lower is better)
Translates to: FSQLGRFCFRDLTQY*SKIMPNSNVASEER
Trigger: CCTTTCTTCAGAGGCCACATTTGAGTTGGGCATTATTTTTGACAAATACTGTGTGAGATCTCTGAAACAGAATCTCCCAAGTTGAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS TCA 72 bp CAGACAGAAGGCTTTTCATCGTGTTCTCAGCATTGTTaGTTTGTATCTTTCTTAGGGCGTATTGGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: QTEGFSSCSQHC*FVSFLGRIGFL
Trigger: GAGAAAACCAATACGCCCTAAGAAAGATACAAATCAACAATGCTGAGAACACGATGAAAAGCCTTCTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521732.5
ENST00000522006.5
CDS CAA 72 bp GTCATTATACTCCTTCCTGCAATTCCAGTCTTCTTCTaGGCTTGTTCCAGTGCTTTTCAACTAATTCCTCTA +
Preference number: 6 (lower is better)
Translates to: VIILLPAIPVFF*ACSSAFQLIPL
Trigger: TAGAGGAATTAGTTGAAAAGCACTGGAACAAGCCAAGAAGAAGACTGGAATTGCAGGAAGGAGTATAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368640.8
ENST00000521732.5
CDS CAA 72 bp CTTGGGAGATTCTGTTTCAGAGATCTCACACAGTATTaGTCAAAAATAATGCCCAACTCAAATGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LGRFCFRDLTQY*SKIMPNSNVAS
Trigger: AGAGGCCACATTTGAGTTGGGCATTATTTTTGACAAATACTGTGTGAGATCTCTGAAACAGAATCTCCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521187.1
CDS CCA 72 bp TCCTGTGCATGGTCAATAGCTTCTTGGACTAAATCATaGCTGAGGTTACTTAGGTTAGATAGTTTTACTTGT +
Preference number: 6 (lower is better)
Translates to: SCAWSIASWTKS*LRLLRLDSFTC
Trigger: ACAAGTAAAACTATCTAACCTAAGTAACCTCAGCCATGATTTAGTCCAAGAAGCTATTGACCATGCACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230538.12
ENST00000389463.9
ENST00000424408.6
ENST00000522006.5
ENST00000523765.1
CDS CAA 72 bp TCAGACAGAAGGCTTTTCATCGTGTTCTCAGCATTGTaGATTTGTATCTTTCTTAGGGCGTATTGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: SDRRLFIVFSAL*ICIFLRAYWFS
Trigger: AGAAAACCAATACGCCCTAAGAAAGATACAAATCAACAATGCTGAGAACACGATGAAAAGCCTTCTGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230538.12
ENST00000368640.8
ENST00000389463.9
ENST00000424408.6
ENST00000521732.5
ENST00000522006.5
CDS CCA 72 bp TGTCCATGCTTTCCTTCTGAACAAGTTGTCCTTTTCTaGAGGCTTGATTTTCCTACAAATAATCCGTATAAA +
Preference number: 6 (lower is better)
Translates to: CPCFPSEQVVLF*RLDFPTNNPYK
Trigger: TTTATACGGATTATTTGTAGGAAAATCAAGCCTCCAGAAAAGGACAACTTGTTCAGAAGGAAAGCATGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521187.1