RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LAMA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000053747

Ensembl transcript IDs: ENST00000269217.11, ENST00000313654.14, ENST00000399516.7, ENST00000585600.5, ENST00000586709.1, ENST00000586751.5, ENST00000587184.5, ENST00000588004.1, ENST00000588164.2, ENST00000588770.5, ENST00000590104.1, ENST00000591749.1, ENST00000592442.1, ENST00000592519.1, ENST00000649721.1

Found 1413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGCAGTGTGGAAGTCAGAAGAGAACATTGGGTTGAAGGGGATGTaGCTCAGTTTCAAAGGTGCAGGGTGTGTAGCTATAAGGGTACCA +
Preference number: 1 (lower is better)
Translates to: TAVWKSEENIGLKGM*LSFKGAGCVAIRVP
Trigger: TGGTACCCTTATAGCTACACACCCTGCACCTTTGAAACTGAGTCACATCCCCTTCAACCCAATGTTCTCTTCTGACTTCCACACTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR GCA 90 bp GTAATACAATGTTCAAGGCCATGGCCAAGAACTGGATGGGTTTACTaGAGTGCTCCATCTGCTGTTTCAAGGAACTCTGACTTCCAGTCC +
Preference number: 1 (lower is better)
Translates to: VIQCSRPWPRTGWVY*SAPSAVSRNSDFQS
Trigger: GGACTGGAAGTCAGAGTTCCTTGAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR CCA 90 bp AAAGCATGTCCACAAGACTGCAGTGTGGAAGTCAGAAGAGAACATTaGGTTGAAGGGGATGTGACTCAGTTTCAAAGGTGCAGGGTGTGT +
Preference number: 1 (lower is better)
Translates to: KACPQDCSVEVRREH*VEGDVTQFQRCRVC
Trigger: ACACACCCTGCACCTTTGAAACTGAGTCACATCCCCTTCAACCCAATGTTCTCTTCTGACTTCCACACTGCAGTCTTGTGGACATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR CCA 90 bp AAAGTAGTAGTAATACAATGTTCAAGGCCATGGCCAAGAACTGGATaGGTTTACTGCAGTGCTCCATCTGCTGTTTCAAGGAACTCTGAC +
Preference number: 1 (lower is better)
Translates to: KVVVIQCSRPWPRTG*VYCSAPSAVSRNSD
Trigger: GTCAGAGTTCCTTGAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTACTACTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR CCA 90 bp CATGAAAGTAGTAGTAATACAATGTTCAAGGCCATGGCCAAGAACTaGATGGGTTTACTGCAGTGCTCCATCTGCTGTTTCAAGGAACTC +
Preference number: 1 (lower is better)
Translates to: HESSSNTMFKAMAKN*MGLLQCSICCFKEL
Trigger: GAGTTCCTTGAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTACTACTACTTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGGCATGTCCACAAGACTaGAGTGTGGAAGTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVACPQD*SVEVRR
Trigger: TCTTCTGACTTCCACACTGCAGTCTTGTGGACATGC...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR CCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAAGTGATGGGTATCCATaGTCAGAATTCAAAATTAGA +
Preference number: 2 (lower is better)
Translates to: HWGPRRENHRLSVDLPKASDGYP*SEFKIR
Trigger: TCTAATTTTGAATTCTGACCATGGATACCCATCACT...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR CCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACGGGAGGGAGGTGCATTaGGTAATCAGTGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYGREVH*VISAFE
Trigger: TTCAAAAGCACTGATTACCCAATGCACCTCCCTCCC...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGAATGATCTCGAGCTaGGGAGGGAGGTGCATTGGG +
Preference number: 2 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRMISS*GGRCIG
Trigger: CCCAATGCACCTCCCTCCCCAGCTCGAGATCATTCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
3UTR-3UTR GCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAATCCCTCACTGTAGTTaGAATAGTGAACACACACAA +
Preference number: 2 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAIPHCS*NSEHTQ
Trigger: TTGTGTGTGTTCACTATTGCAACTACAGTGAGGGAT...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR CCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCTGGTTGGTAGCAGGCTaGGGAAGGCTAGGATTGGGA +
Preference number: 2 (lower is better)
Translates to: SSDEQILCRGYGNACVAFWLVAG*GRLGLG
Trigger: TCCCAATCCTAGCCTTCCCCAGCCTGCTACCAACCA...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGTTTGTGTCCTGAGTaGAGAATGATCTCGAGCTGG +
Preference number: 2 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGLCPE*RMISSW
Trigger: CCAGCTCGAGATCATTCTTCACTCAGGACACAAACC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
3UTR-3UTR TCA 90 bp TTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGGGTTTGACAAAAAGTGTTTCAAGGAACTCTaGCTTCCAGTCCCATTTAGT +
Preference number: 2 (lower is better)
Translates to: FTTGKMSIASGHLGFDKKCFKEL*LPVPFS
Trigger: ACTAAATGGGACTGGAAGTCAGAGTTCCTTGAAACA...CTTTTTGTCAAACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGGAGGGAGGTGCATTaGGTAATCAGTGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGREVH*VISAFE
Trigger: TTCAAAAGCACTGATTACCCAATGCACCTCCCTCCC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
3UTR-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGGAGGGAGGTGCATTaGGTAATCAGTGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGREVH*VISAFE
Trigger: TTCAAAAGCACTGATTACCCAATGCACCTCCCTCCC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
3UTR CAA 90 bp TATTTTGTAGATAAAACTAGAAGTGAGTCCTCCATCCCACTGACTTaGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACATC +
Preference number: 2 (lower is better)
Translates to: YFVDKTRSESSIPLT*VSLPYEASVMVRYI
Trigger: GATGTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGATGGAGGACTCACTTCTAGTTTTATCTACAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR TCA 90 bp TTTTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGGGTTTGACAAAAAAACACCCCTTGTGCTaGTTCTTTAATTACAGCATG +
Preference number: 2 (lower is better)
Translates to: FSQQGRCPLLQVILGLTKKHPLC*FFNYSM
Trigger: CATGCTGTAATTAAAGAATCAGCACAAGGGGTGTTT...TTTTGTCAAACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGGAGGGAGGTGCATTaGGTAATCAGTGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGREVH*VISAFE
Trigger: TTCAAAAGCACTGATTACCCAATGCACCTCCCTCCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
3UTR-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCACATGTAGCACTGAATaGCAAAGTGATGGGTATCCA +
Preference number: 2 (lower is better)
Translates to: SSDEQILCRGYGNACVAFTCSTE*QSDGYP
Trigger: TGGATACCCATCACTTTGGCATTCAGTGCTACATGT...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR CCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGGATTGGGAAACCAATaGGCTTCATTAATTAATGGG +
Preference number: 2 (lower is better)
Translates to: SSDEQILCRGYGNACVAFGLGNQ*ASLING
Trigger: CCCATTAATTAATGAAGCCCATTGGTTTCCCAATCC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCACCCTCATCAGTATATaGTCAGTGATTATCTGTAGA +
Preference number: 2 (lower is better)
Translates to: SSDEQILCRGYGNACVAFTLISI*SVIICR
Trigger: TCTACAGATAATCACTGAGCATATACTGATGAGGGT...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR GCA 72 bp TGTTCAAGGCCATGGCCAAGAACTGGATGGGTTTACTaGAGTGCTCCATCTGCTGTTTCAAGGAACTCTGAC +
Preference number: 3 (lower is better)
Translates to: CSRPWPRTGWVY*SAPSAVSRNSD
Trigger: GTCAGAGTTCCTTGAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR CCA 72 bp CCTGGAGGAGAAGCCAATAGATTCAGGTTTAGGAAGTaGCAGAGAAGCTCTATCTTCACCCTTTCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: PGGEANRFRFRK*QRSSIFTLSGP
Trigger: AGGCCCTGAAAGGGTGAAGATAGAGCTTCTCTGCCACTTCCTAAACCTGAATCTATTGGCTTCTCCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590104.1
3UTR TCA 72 bp GATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTaGAGAATGATCTCGAGCTGGGGAGGGAGGTGCATT +
Preference number: 3 (lower is better)
Translates to: DSLLNLSGLCPE*RMISSWGGRCI
Trigger: AATGCACCTCCCTCCCCAGCTCGAGATCATTCTTCACTCAGGACACAAACCAGACAGGTTTAATAGCGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
3UTR TCA 72 bp AGACTGCAGTGTGGAAGTCAGAAGAGAACATTGGGTTaGAGGGGATGTGACTCAGTTTCAAAGGTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: RLQCGSQKRTLG*RGCDSVSKVQG
Trigger: ACCCTGCACCTTTGAAACTGAGTCACATCCCCTTCAACCCAATGTTCTCTTCTGACTTCCACACTGCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR CCA 72 bp CCACAAGACTGCAGTGTGGAAGTCAGAAGAGAACATTaGGTTGAAGGGGATGTGACTCAGTTTCAAAGGTGC +
Preference number: 3 (lower is better)
Translates to: PQDCSVEVRREH*VEGDVTQFQRC
Trigger: GCACCTTTGAAACTGAGTCACATCCCCTTCAACCCAATGTTCTCTTCTGACTTCCACACTGCAGTCTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR CAA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCACATCATAATCTAGACTaGGTTGGTAGCAGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSHHNLD*VGSRLG
Trigger: CCCCAGCCTGCTACCAACCAAGTCTAGATTATGATG...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR TCA 72 bp ATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTaGGTGAAGAATGATCTCGAGCTGGGGAGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: IRFAIKPVWFVS*VKNDLELGREV
Trigger: CACCTCCCTCCCCAGCTCGAGATCATTCTTCACTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
3UTR CCA 72 bp GTAATACAATGTTCAAGGCCATGGCCAAGAACTGGATaGGTTTACTGCAGTGCTCCATCTGCTGTTTCAAGG +
Preference number: 3 (lower is better)
Translates to: VIQCSRPWPRTG*VYCSAPSAVSR
Trigger: CCTTGAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR CCA 72 bp GATGTGGTTAGAAAGCATGTCCACAAGACTGCAGTGTaGAAGTCAGAAGAGAACATTGGGTTGAAGGGGATG +
Preference number: 3 (lower is better)
Translates to: DVVRKHVHKTAV*KSEENIGLKGM
Trigger: CATCCCCTTCAACCCAATGTTCTCTTCTGACTTCCACACTGCAGTCTTGTGGACATGCTTTCTAACCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR TCA 72 bp TGGAAGTCAGAAGAGAACATTGGGTTGAAGGGGATGTaGCTCAGTTTCAAAGGTGCAGGGTGTGTAGCTATA +
Preference number: 3 (lower is better)
Translates to: WKSEENIGLKGM*LSFKGAGCVAI
Trigger: TATAGCTACACACCCTGCACCTTTGAAACTGAGTCACATCCCCTTCAACCCAATGTTCTCTTCTGACTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR CCA 72 bp AGTAGTAATACAATGTTCAAGGCCATGGCCAAGAACTaGATGGGTTTACTGCAGTGCTCCATCTGCTGTTTC +
Preference number: 3 (lower is better)
Translates to: SSNTMFKAMAKN*MGLLQCSICCF
Trigger: GAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR-3UTR CAA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCTGGGGAAGGCTAGGATaGGGAAACCAATGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: SSDEQILCRGYGNACVAFWGRLG*GNQWAS
Trigger: TGAAGCCCATTGGTTTCCCAATCCTAGCCTTCCCCA...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR GCA 72 bp GTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTaGCCTCAAGGAATTGATCATCATAATCTAGACTTG +
Preference number: 3 (lower is better)
Translates to: VTSISASLPGSL*PQGIDHHNLDL
Trigger: CAAGTCTAGATTATGATGATCAATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR-3UTR CAA 90 bp GTTTTCATTTTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGGGTTTTGTCAGTTAGTGCTCTaGGAAGAGAAGAACTTCATC +
Preference number: 3 (lower is better)
Translates to: VFIFTTGKMSIASGHLGFCQLVL*EEKNFI
Trigger: GATGAAGTTCTTCTCTTCCAAGAGCACTAACTGACA...AAACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAAAATGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR-3UTR CAA 90 bp GATGGAGAGAAAACAGTTAAGCCAATGTTTTACCTTATGGCAAAGATGGTGAAACTAAAACCTACGTTTTaGCATTCCCTGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: DGEKTVKPMFYLMAKMVKLKPTF*HSLEEK
Trigger: CTTCTCCTCCAGGGAATGCAAAAACGTAGGTTTTAG...TTTCACCATCTTTGCCATAAGGTAAAACATTGGCTTAACTGTTTTCTCTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590104.1
3UTR-3UTR CAA 90 bp TTTTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGGGTTTGACAAAAATTTTTAATAAGCCCTaGTCAGTTAGTGCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: FSQQGRCPLLQVILGLTKIFNKP*SVSALG
Trigger: TCCAAGAGCACTAACTGACAAGGGCTTATTAAAAAT...TTTTGTCAAACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592519.1
3UTR CCA 72 bp ACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATaGTCAGAATTCAAAATTAGATTCGCTATTAAACCT +
Preference number: 3 (lower is better)
Translates to: TCSTECQSDGYP*SEFKIRFAIKP
Trigger: AGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACCTCACACTGGGGCCTaGCCGTGCGGGGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAPHTGA*PCGEGS
Trigger: GCTGCCCTCCCCGCACGGTCAGGCCCCAGTGTGAGG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTGCACAGCGGGTGCACTaGCGCCCGATGACGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVAQRVH*RPMTLG
Trigger: GCCCAACGTCATCGGGCGGCAGTGCACCCGCTGTGC...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTGACATGGGCAGGCCCTaGAGGATCCGTGGACGGCGT +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVDMGRP*RIRGRR
Trigger: ACGCCGTCCACGGATCCTGCAGGGCCTGCCCATGTC...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCATGGGCAGCTGCCTCCTaGAGCCGAGCACGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAWAAAS*SRARRS
Trigger: TGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCA...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGCAGCCCTGTTGGCTaGGTCCTCGGCCGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAGSPVG*VLGRFD
Trigger: ATCAAAGCGGCCGAGGACGCAGCCAACAGGGCTGCC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTCCAGAAGCCCTGCGCTaGCACTCAGGCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVPEALR*HSGPAA
Trigger: AGCTGCAGGGCCTGAGTGCCAGCGCAGGGCTTCTGG...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTTCCGTAGTGGCCTGTTaGACAGCGGGTGCACTGCCG +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVSVVAC*TAGALP
Trigger: CGGCAGTGCACCCGCTGTGCAACAGGCCACTACGGA...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCATCAGGGGATGACAGCTaGCCAGCTGGCCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKASGDDS*PAGHCC
Trigger: ACAGCAATGGCCAGCTGGGCAGCTGTCATCCCCTGA...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACATCCACAACTGCCATaGCGATGTAGTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAHPQLP*RCSPGR
Trigger: CCTCCCGGGACTACATCGGCATGGCAGTTGTGGATG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGTAGTGGCTCTTGAGTaGTGGCAGGTGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAVVALE*WQVGRG
Trigger: TCCCCTTCCCACCTGCCAGCACTCAAGAGCCACTAC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTCGATGGTGCCCCTCCTaGAACAGTTGCAGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVRWCPS*NSCSLR
Trigger: GCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCG...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGGCATGGAAGGAGCCTaGCCGTGGCCACCCGCCATC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAGMEGA*PWPPAI
Trigger: GATGGCGGGTGGCCACGGGCAGGCTCCTTCCATGCC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAAGAATGATCTCGAGCTaGGGAGGGAGGTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKARMISS*GGRCIG
Trigger: CCCAATGCACCTCCCTCCCCAGCTCGAGATCATTCT...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCACCTGCAGCTGAGACTTaGCCAGGCGGAGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAPAAET*PGGAAR
Trigger: GCGAGCAGCTCCGCCTGGTCAAGTCTCAGCTGCAGG...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCATCCTCCTCTGGAGAATaGGGCAGATCGCACAAGCTT +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKASSSGE*GRSHKL
Trigger: AAGCTTGTGCGATCTGCCTCATTCTCCAGAGGAGGA...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAAGACACCCCGAAGCTTaGAGAAGGGGTATACAAGGG +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKARHPEA*RRGIQG
Trigger: CCCTTGTATACCCCTTCTTCAAGCTTCGGGGTGTCT...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAGGCCGGTGGCCCCAGTaGGGTGGCACTCACAAGGCA +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSGRWPQ*GGTHKA
Trigger: TGCCTTGTGAGTGCCACCCCACTGGGGCCACCGGCC...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGGTCACACTCCGGCATaGCAGCCTCGATGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAGHTPA*QPRWCP
Trigger: GGGGCACCATCGAGGCTGCCATGCCGGAGTGTGACC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCGGGGTCCTCCCGCCTaGGCCGTCCGCAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDRGPPA*AVRRGA
Trigger: AGCCCCTCTGCGGACGGCTCAGGCGGGAGGACCCCG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAAGTCGGGTGAAGGCTaGGCCCGGCCGCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSKSGEG*ARPRPR
Trigger: CCGGGGCCGCGGCCGGGCTCAGCCTTCACCCGACTT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGAGGTGTAGTGGCTCTTaGGTGCTGGCAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVRCSGS*VLAGGK
Trigger: CTTCCCACCTGCCAGCACTCAAGAGCCACTACACCT...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACCCATCCACCGACACCTaGGCGGGAAACGTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYPSTDT*AGNVGC
Trigger: GCACCCGACGTTTCCCGCGCAGGTGTCGGTGGATGG...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACCAGGTAGGAGGTGGGTaGGACCCAGGACGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYQVGGG*DPGRAV
Trigger: CACAGCGCGTCCTGGGTCGCACCCACCTCCTACCTG...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATTGACCAGGCGGAGCTaGTCGCCCATGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSLTRRS*SPMVAR
Trigger: CCTGGCCACCATGGGCGAGCAGCTCCGCCTGGTCAA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACGGTTCAGCAAGAGCTaGGACTCCCTTTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKARFSKS*DSLLSA
Trigger: AGCTGATAAAAGGGAGTCGCAGCTCTTGCTGAACCG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGCGATCCCCGTTTTCTaGAAAGAACAGCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAAIPVF*KEQQAS
Trigger: AGAGGCTTGCTGTTCTTTGCAGAAAACGGGGATCGC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGCAGCCGGCCATGGGGTaGAAGCTGAATGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVQPAMG*KLNECV
Trigger: GACACACTCATTCAGCTTCCACCCCATGGCCGGCTG...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGATGATGCAGCCGGTCTaGCCGTGGGGTGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVMMQPV*PWGVCL
Trigger: GAGACAAACACCCCACGGCCAGACCGGCTGCATCAT...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACGCTGCTCGCCCATGGTaGCCAGGTCGTTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYAARPW*PGRSGG
Trigger: CCCTCCTGAACGACCTGGCCACCATGGGCGAGCAGC...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGGAGCTGCTCGCCCATaGTGGCCAGGTCGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAGAARP*WPGRSG
Trigger: TCCTGAACGACCTGGCCACCATGGGCGAGCAGCTCC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCCTCACACTGGGGCCTaGCCGTGCGGGGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDPHTGA*PCGEGS
Trigger: GCTGCCCTCCCCGCACGGTCAGGCCCCAGTGTGAGG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACGGGGCCGCTCCCCTTaGTCCACGCGCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSERGRSP*STRWKP
Trigger: GGGCTTCCAGCGCGTGGAGCAAGGGGAGCGGCCCCG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAAAACGTCGGGTGCGCTaGTTGGTAAAAATGGATGAC +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAKRRVR*LVKMDD
Trigger: GTCATCCATTTTTACCAAGCAGCGCACCCGACGTTT...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGCACATCGGTCACACTaGCGCCCTGTGATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAAHRSH*RPVILG
Trigger: GCCCAGAATCACAGGGCGGCAGTGTGACCGATGTGC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTTCAAGCCATTTGCCTaGTTGGCTTGGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVFKPFA*LAWAAA
Trigger: GGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAA...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTGTAAGGACCGCGCGTaGTTTTCTGCCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVCKDRA*FSASST
Trigger: TGTGGAGGAGGCAGAAAAGCACGCGCGGTCCTTACA...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGCATGTCCACAAGACTaGAGTGTGGAAGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAACPQD*SVEVRR
Trigger: TCTTCTGACTTCCACACTGCAGTCTTGTGGACATGC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCTTGCTCCACGCGCTaGAAGCCCGCGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPCSTR*KPAAWG
Trigger: CCCCCACGCCGCGGGCTTCCAGCGCGTGGAGCAAGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCGTCGGCGGCAGTACTaGCCCCAGTGCCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRRRQY*PQCPTP
Trigger: CGGGGTCGGGCACTGGGGCCAGTACTGCCGCCGACG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGGCCCTGGATGGTGTaGCCGCTGCCTGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSWPWMV*PLPGAV
Trigger: CACCGCCCCAGGCAGCGGCCACACCATCCAGGGCCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCCCCAGGTAGGAGGTaGGTGCGACCCAGGACGCGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPPGRR*VRPRTR
Trigger: GCGCGTCCTGGGTCGCACCCACCTCCTACCTGGGGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACTACCTCCGAATTTCTaGGGATTCCCGAAATATCCC +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKALPPNF*GFPKYP
Trigger: GGGATATTTCGGGAATCCCCAGAAATTCGGAGGTAG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGCAGATTCAGATGCACTaGCAGCCCTGTTGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVQIQMH*QPCWLR
Trigger: ACGCAGCCAACAGGGCTGCCAGTGCATCTGAATCTG...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAAGCCTCTATCCACGGTaGTCTGAATTGTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKASLYPR*SELSVQ
Trigger: TTGGACAGACAATTCAGACCACCGTGGATAGAGGCT...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTCACCTTCACGCTCCTTaGGGAGGCCACTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIHLHAP*GGHWCV
Trigger: GACACACCAGTGGCCTCCCCAAGGAGCGTGAAGGTG...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTCCACAAAGCTGTTTGTaGGGAGGCTCTTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVPQSCL*GGSLVS
Trigger: GGAAACCAAAGAGCCTCCCCACAAACAGCTTTGTGG...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTCTCCAGATTTACCATTaGACCTCATGGGGACAGCAA +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVLQIYH*TSWGQQ
Trigger: TTGCTGTCCCCATGAGGTTCAATGGTAAATCTGGAG...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTCTATCCACGGTGGTCTaGATTGTCTGTCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVLSTVV*IVCPKV
Trigger: AACCTTTGGACAGACAATTCAGACCACCGTGGATAG...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGAGACTGCTTTGGTGTaGCCGACGTTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAETALV*PTLRSH
Trigger: GTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGCTTCTACATTTTCCTTaGAGAGGCAAGCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVLLHFP*RGKPRS
Trigger: GGACCGGGGCTTGCCTCTGCAAGGAAAATGTAGAAG...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGAATGTCCGTTGCAATTaGAGGGAACACACCGTCCGG +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVNVRCN*REHTVR
Trigger: CCGGACGGTGTGTTCCCTGCAATTGCAACGGACATT...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGATTTGAATGTCCGTTaGAATTGCAGGGAACACACC +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKADLNVR*NCREHT
Trigger: GGTGTGTTCCCTGCAATTGCAACGGACATTCAAATC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACATCCGTGGACGGCGTTaGCATAGTAGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYIRGRR*HSSPPG
Trigger: GCCAGGAGGGCTACTATGGCAACGCCGTCCACGGAT...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCATCTGCTTCTCTGAGGTaGTTTCCAAAGTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKASASLR*FPKFLF
Trigger: GAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGA...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTGAATCGAATGGTCTCTaGCGTTGTTTATGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVESNGL*RCLWRL
Trigger: GAGACGCCATAAACAACGGCAGAGACCATTCGATTC...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTACAACCCTCAAAATTaGTCCCGCCCAGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVYNPQN*SRPDAE
Trigger: CTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTA...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp TCAGGTTTAGGAAGTGGCAGAGAAGCTCTATCTTCACCCTTTCAGGGCCTGCGTGCCTGCGTCTCAACCTaGACCTTTGGTTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SGLGSGREALSSPFQGLRACVST*TFGFPD
Trigger: ATCAGGGAAACCAAAGGTGCAGGTTGAGACGCAGGC...ACGCAGGCCCTGAAAGGGTGAAGATAGAGCTTCTCTGCCACTTCCTAAACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590104.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGAACCTGCCGCGGCTaGAGCGGGCACCAGCCGGAT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGTCRG*SGHQPD
Trigger: ATCCGGCTGGTGCCCGCTCCAGCCGCGGCAGGTTCC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCGCTGCCTGGGGCGGTaGGGCCCCCGACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPRCLGR*GPRPTC
Trigger: GCAAGTTGGTCGGGGGCCCCACCGCCCCAGGCAGCG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGTTAGTGTGAGGACATaGGCAGGCCCTGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAVSVRT*AGPAGS
Trigger: GGATCCTGCAGGGCCTGCCCATGTCCTCACACTAAC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTGTGAGCCACCACACCTaGTCATTACCCCTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVVSHHT*SLPLSN
Trigger: ATTAGAAAGGGGTAATGACCAGGTGTGGTGGCTCAC...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGCCGCCAGCGCCTCTaGTTGTACCCTGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGRQRL*LYPVQQ
Trigger: CTGCTGCACAGGGTACAATCAGAGGCGCTGGCGGCC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTGCACTGCCGCCCGATaGCGTTGGGCTGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPECTAAR*RWAGMG
Trigger: GCCCATGCCAGCCCAACGTCATCGGGCGGCAGTGCA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAGCAAAGCTGTTAGTGTaGGGACATGGGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSAKLLV*GHGQAL
Trigger: CAGGGCCTGCCCATGTCCTCACACTAACAGCTTTGC...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGGGGTTGAAGGGGATGTaGCTCAGTTTCAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVGLKGM*LSFKGA
Trigger: TGCACCTTTGAAACTGAGTCACATCCCCTTCAACCC...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTCAGCTCTGGAACCTaGCGCGGCTGGAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELSSGT*RGWSGH
Trigger: GTGCCCGCTCCAGCCGCGGCAGGTTCCAGAGCTGAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCGCCTCCCGGACCTaGAGCGCCAGGACTAGCGCA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSCASRT*SARTSA
Trigger: TGCGCTAGTCCTGGCGCTGCAGGTCCGGGAGGCGCA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCAGTACTGGCCCCAGTaGCCGACCCCGAGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLQYWPQ*PTPRPR
Trigger: GCGCGGCCTCGGGGTCGGGCACTGGGGCCAGTACTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGTGGGCTGCCTCACTaGCACGGGTCTTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSCGLPH*HGSWLP
Trigger: GGGGAGCCAAGACCCGTGGCAGTGAGGCAGCCCACA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGCATGGAAGGAGCCTaGCCGTGGCCACCCGCCATC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGMEGA*PWPPAI
Trigger: GATGGCGGGTGGCCACGGGCAGGCTCCTTCCATGCC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCACAGCGGGTGCACTaGCGCCCGATGACGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDAQRVH*RPMTLG
Trigger: GCCCAACGTCATCGGGCGGCAGTGCACCCGCTGTGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACCTGTGTACCCAGCTTTaGAGGAGCACCGCACGTCTC +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYLCTQL*RSTARL
Trigger: GAGACGTGCGGTGCTCCTGCAAAGCTGGGTACACAG...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCCCGCAGGTGGCGGTaGCCCAAATCCTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPRRWR*PKSSPP
Trigger: AGGCGGCGAGGATTTGGGCCACCGCCACCTGCGGGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCCTCTCCCCGCAGGTaGCGGTGGCCCAAATCCTCG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPSPRR*RWPKSS
Trigger: CGAGGATTTGGGCCACCGCCACCTGCGGGGAGAGGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGAACTGGCCCTGGATaGTGTGGCCGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSRTGPG*CGRCLG
Trigger: CCCCAGGCAGCGGCCACACCATCCAGGGCCAGTTCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAAGGAGCCTGCCCGTaGCCACCCGCCATCCACCGA +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDEGACP*PPAIHR
Trigger: TCGGTGGATGGCGGGTGGCCACGGGCAGGCTCCTTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTGGCCCCAGTGGGGTaGCACTCACAAGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVAPVG*HSQGRA
Trigger: CGCCCTGCCTTGTGAGTGCCACCCCACTGGGGCCAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATGCAGTGAGGGCCGGTaGCCCCAGTGGGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSECSEGR*PQWGGT
Trigger: AGTGCCACCCCACTGGGGCCACCGGCCCTCACTGCA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGCAAGCCCCGGTCCCTaGGTCACACACTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSASPGP*VTHSWL
Trigger: GAGCCAGGAGTGTGTGACCCAGGGACCGGGGCTTGC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAACCCAGGACGCGCTGTaGATGGTTGCGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSTQDAL*MVAGSS
Trigger: GGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTCCCCCAGGTAGGAGGTaGGTGCGACCCAGGACGCGC +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCPPGRR*VRPRTR
Trigger: GCGCGTCCTGGGTCGCACCCACCTCCTACCTGGGGG...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGGCTGTTACAACTGCATaGTTGGCAGCTACCTCCGAA +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVAVTTA*LAATSE
Trigger: TTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGC...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACTTCCGAGCACTTTTTaGTTACTCCCACAGTATCAT +
Preference number: 4 (lower is better)
Translates to: HWGPRRENHRLSVDLPKALPSTF*LLPQYH
Trigger: ATGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAAACATCAACAGAAGGTaGCGACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSNINRR*RLLGQV
Trigger: CACCTGCCCCAGCAGTCGTCACCTTCTGTTGATGTT...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTTGCACTGCCGCCCGATaGCGTTGGGCTGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCCTAAR*RWAGMG
Trigger: GCCCATGCCAGCCCAACGTCATCGGGCGGCAGTGCA...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTGGGTCCAAATGGAATaGGCCTTCTCGACACACATT +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVWVQME*AFSTHI
Trigger: AATGTGTGTCGAGAAGGCTCATTCCATTTGGACCCA...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAACATGTGCTGACCAGTaGGCTGTACATCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLATCADQ*AVHPAS
Trigger: AGAAGCCGGATGTACAGCTCACTGGTCAGCACATGT...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCTGCAGCTGAGACTTaGCCAGGCGGAGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPAAET*PGGAAR
Trigger: GCGAGCAGCTCCGCCTGGTCAAGTCTCAGCTGCAGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTCAGGCCCTGCAGCTaGGACTTGACCAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLRPCS*DLTRRS
Trigger: GCTCCGCCTGGTCAAGTCTCAGCTGCAGGGCCTGAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTCAGGCCCTGCAGCTaGGACTTGACCAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELRPCS*DLTRRS
Trigger: GCTCCGCCTGGTCAAGTCTCAGCTGCAGGGCCTGAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTCAGGCCCTGCAGCTaGGACTTGACCAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELRPCS*DLTRRS
Trigger: GCTCCGCCTGGTCAAGTCTCAGCTGCAGGGCCTGAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAGTCCACAGCAAACTGTaGCCTGGGTTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSVHSKL*PGFQQL
Trigger: GAGCTGCTGAAACCCAGGTCACAGTTTGCTGTGGAC...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTAAGTGCTTCCCGGGCTaGCTTCCGATGTGTATTAGG +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIKCFPG*LPMCIR
Trigger: CCTAATACACATCGGAAGTCAGCCCGGGAAGCACTT...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGGTGTGACCGACGTTaGGGTCCCACCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSWCDRR*GPTCPT
Trigger: AGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCCATCCACCGACACCTaGGCGGGAAACGTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDPSTDT*AGNVGC
Trigger: GCACCCGACGTTTCCCGCGCAGGTGTCGGTGGATGG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCACCACAGCAAGTGCTATaGGCCCACTTCCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSPQQVL*AHFLCQ
Trigger: CTGACACAGGAAGTGGGCGCATAGCACTTGCTGTGG...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGACATGGGCAGGCCCTaGAGGATCCGTGGACGGCGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEDMGRP*RIRGRR
Trigger: ACGCCGTCCACGGATCCTGCAGGGCCTGCCCATGTC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTGACCAGGCGGAGCTaGTCGCCCATGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELTRRS*SPMVAR
Trigger: CCTGGCCACCATGGGCGAGCAGCTCCGCCTGGTCAA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACCCCTGGTGGGTTTTCTaGCAGGTCCTTATCCGGTTC +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYPWWVF*QVLIRF
Trigger: GAACCGGATAAGGACCTGGCAGAAAACCCACCAGGG...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGGGCAGCTGCCTCCTaGAGCCGAGCACGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSWAAAS*SRARRS
Trigger: TGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGCAGCCCTGTTGGCTaGGTCCTCGGCCGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGSPVG*VLGRFD
Trigger: ATCAAAGCGGCCGAGGACGCAGCCAACAGGGCTGCC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTGGTGAGCAAGCATCTTaGCACACCTTCACGCTCCTT +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIGEQAS*HTFTLL
Trigger: AAGGAGCGTGAAGGTGTGGCAAGATGCTTGCTCACC...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAGTGACTGCCACCGAGTaGCACTGTCCATCACACAGA +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSVTATE*HCPSHR
Trigger: TCTGTGTGATGGACAGTGGCACTCGGTGGCAGTCAC...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAACATGCTCTCGGCACTaGCACACTCCCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSTCSRH*HTPEGP
Trigger: TGGGCCCTCGGGAGTGTGCCAGTGCCGAGAGCATGT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAAGGAGCCTGCCCGTaGCCACCCGCCATCCACCGA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPEGACP*PPAIHR
Trigger: TCGGTGGATGGCGGGTGGCCACGGGCAGGCTCCTTC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAAGGCCACCAGGGACCTaGCGGAATTCTTACAGAATC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLARPPGT*RNSYRI
Trigger: GATTCTGTAAGAATTCCGCCAGGTCCCTGGTGGCCT...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTGGCCCCAGTGGGGTaGCACTCACAAGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPVAPVG*HSQGRA
Trigger: CGCCCTGCCTTGTGAGTGCCACCCCACTGGGGCCAC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGTCACACTCCGGCATaGCAGCCTCGATGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGHTPA*QPRWCP
Trigger: GGGGCACCATCGAGGCTGCCATGCCGGAGTGTGACC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCAAGCCCCGGTCCCTaGGTCACACACTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEASPGP*VTHSWL
Trigger: GAGCCAGGAGTGTGTGACCCAGGGACCGGGGCTTGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGGACGCGCTGTGGATaGTTGCGGGCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSRTRCG*LRAAPG
Trigger: TCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGACCCAGGACGCGCTGTaGATGGTTGCGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPETQDAL*MVAGSS
Trigger: GGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTCTATCTTTGGGTTCTTaGTTTATGCAGTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVLSLGS*FMQSPV
Trigger: GACTGGAGACTGCATAAACCAAGAACCCAAAGATAG...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCTGCTCGCCCATGGTaGCCAGGTCGTTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSAARPW*PGRSGG
Trigger: CCCTCCTGAACGACCTGGCCACCATGGGCGAGCAGC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCAGAAGCCCTGCGCTaGCACTCAGGCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPEALR*HSGPAA
Trigger: AGCTGCAGGGCCTGAGTGCCAGCGCAGGGCTTCTGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACACTGGCAGCCCTGTTaGCTGCGTCCTCGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHWQPC*LRPRPL
Trigger: AAGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTGACTCCGGGTGTTTCTaGTTTACTGGATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIDSGCF*FTGCGS
Trigger: GGAGCCACATCCAGTAAACCAGAAACACCCGGAGTC...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTGGAGATTTAAAAATTaGGCCGCCGCTATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVWRFKN*AAAIAG
Trigger: ACCAGCGATAGCGGCGGCCCAATTTTTAAATCTCCA...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTCAGCAAACTGTGACCTaGGTTTCAGCAGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIQQTVT*VSAAPE
Trigger: CTCAGGAGCTGCTGAAACCCAGGTCACAGTTTGCTG...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACAGACTGACAGGCCCCTaGACTTCCAAGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYRLTGP*TSKASV
Trigger: CACTGAAGCCTTGGAAGTCCAGGGGCCTGTCAGTCT...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AGGCCATGGCCAAGAACTGGATGGGTTTACTGCAGTGCTCCATCTGCTGTTTCACAATGTTCAAGGCCATaGCCAAGAACTGGATGGGTT +
Preference number: 4 (lower is better)
Translates to: RPWPRTGWVYCSAPSAVSQCSRP*PRTGWV
Trigger: AACCCATCCAGTTCTTGGCCATGGCCTTGAACATTG...TGAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATACGTGCACTCGTCCATaGTGCAGCCGGTCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDTCTRP*CSRSGR
Trigger: ACGGCCAGACCGGCTGCATCATGGACGAGTGCACGT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTCAGCTTCTGCTTCTCTaGGGTGCTTTCCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIQLLLL*GAFQSS
Trigger: GGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTG...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACGTATTAGGATCCCAGTaGGACTTCTTGGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYVLGSQ*DFLGGC
Trigger: GCATCCGCCCAAGAAGTCTCACTGGGATCCTAATAC...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGTGTGACCGACGTTaGGGTCCCACCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSWCDRR*GPTCPT
Trigger: AGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTAGTCCTCCATCCCACTaGCTTTGGTTAGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGISPPSH*LWLACH
Trigger: ATGGCAAGCTAACCAAAGTCAGTGGGATGGAGGACT...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCACACTCGTGGCTCTaGTCCCAAGCGGCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSHSWL*SQAAGR
Trigger: GCGGCCCGCCGCTTGGGAGCAGAGCCACGAGTGTGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTCCCGAGGGCCCACTaGACATGGAGGACAATGCCC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLPRAH*TWRTMP
Trigger: GGGCATTGTCCTCCATGTGCAGTGGGCCCTCGGGAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTGCCCATAACTGGCAATaGAGTGGACTTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIAHNWQ*SGLVVS
Trigger: TGAGACCACAAGTCCACTGCATTGCCAGTTATGGGC...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCCGTAGTGGCCTGTTaGACAGCGGGTGCACTGCCG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESVVAC*TAGALP
Trigger: CGGCAGTGCACCCGCTGTGCAACAGGCCACTACGGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGAGGGCAGCGGCACTaGCCCGTCATCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGGQRH*PVISSQ
Trigger: TTGTGAAGAGATGACGGGGCAGTGCCGCTGCCCTCC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCCTCCTGGAACAGTTaGAGCCTTCGCAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPSWNS*SLRSRP
Trigger: TGGCCGGCTGCGAAGGCTGCAACTGTTCCAGGAGGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGCTTGCATCTGCACTaGCCGCTGTCCCGGTCACAC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGLHLH*PLSRSH
Trigger: GTGTGACCGGGACAGCGGGCAGTGCAGATGCAAGCC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGCTTGCATCTGCACTaGCCGCTGTCCCGGTCACAC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGLHLH*PLSRSH
Trigger: GTGTGACCGGGACAGCGGGCAGTGCAGATGCAAGCC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCATGCCCAGCTGGCCATTaGTGTTACAACTGCATGGTT +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLACPAGH*CYNCMV
Trigger: AACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCA...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGGCAGCTGCCTCCTaGAGCCGAGCACGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSWAAAS*SRARRS
Trigger: TGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTTGGCTTGGGCAGCTaGCTCCTGCAGCCGAGCACG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLGLGS*LLQPST
Trigger: CGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AGGCCATGGCCAAGAACTGGATGGGTTTACTGCAGTGCTCCATCTGCTGTTTCAGAGTCTTTTTCCTTGTaGTATGCACCCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RPWPRTGWVYCSAPSAVSESFSL*YAPRYL
Trigger: CAAGTACCTGGGTGCATAGCACAAGGAAAAAGACTC...TGAAACAGCAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTGGAAGCCCGCGGCGTaGGGGTGGCCTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCWKPAA*GWPLSS
Trigger: AGAGCTGAGAGGCCACCCCCACGCCGCGGGCTTCCA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGCCGGTGGCCCCAGTaGGGTGGCACTCACAAGGCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGRWPQ*GGTHKA
Trigger: TGCCTTGTGAGTGCCACCCCACTGGGGCCACCGGCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTGCAGTGAGGGCCGGTaGCCCCAGTGGGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCCSEGR*PQWGGT
Trigger: AGTGCCACCCCACTGGGGCCACCGGCCCTCACTGCA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATCACACACCTCACACTaGGGCCTGACCGTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESHTSH*GLTVRG
Trigger: TCCCCGCACGGTCAGGCCCCAGTGTGAGGTGTGTGA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCACACACCTCACACTaGGGCCTGACCGTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSHTSH*GLTVRG
Trigger: TCCCCGCACGGTCAGGCCCCAGTGTGAGGTGTGTGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAGGACGCGCTGTGGATaGTTGCGGGCAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSERTRCG*LRAAPG
Trigger: TCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTCCTCCCTAGACACTaGGGCACGGCTGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELLPRH*GTAAGM
Trigger: CATGCCAGCAGCCGTGCCCCAGTGTCTAGGGAGGAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGAGCTGCTCGCCCATaGTGGCCAGGTCGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGAARP*WPGRSG
Trigger: TCCTGAACGACCTGGCCACCATGGGCGAGCAGCTCC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATTGTTCTCCCCCTGGTaGGTTTTCTGCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSLFSPW*VFCQVL
Trigger: AAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCACTGGCAGCCCTGTTaGCTGCGTCCTCGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPHWQPC*LRPRPL
Trigger: AAGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACACCTTCACGCTCCTTaGGGAGGCCACTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSHLHAP*GGHWCV
Trigger: GACACACCAGTGGCCTCCCCAAGGAGCGTGAAGGTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCACCCAGTGAGACTTCTTaGGCGGATGCTGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAPSETS*ADAENK
Trigger: CTTGTTTTCAGCATCCGCCCAAGAAGTCTCACTGGG...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR CAA 72 bp TTGTGCCCTCAAGGAATTGATCATCATAATCTAGACTaGGTTGGTAGCAGGCTGGGGAAGGCTAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: LCPQGIDHHNLD*VGSRLGKARIG
Trigger: CCCAATCCTAGCCTTCCCCAGCCTGCTACCAACCAAGTCTAGATTATGATGATCAATTCCTTGAGGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCAGTGACAGCGGCCTaGACCCTGTTCACAGCCATC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEAVTAA*TLFTAI
Trigger: GATGGCTGTGAACAGGGTTCAGGCCGCTGTCACTGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCTTCGGCAATCACTTaGTCCCGGCAGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPSAIT*SRQPST
Trigger: TGTGCTTGGCTGCCGGGATCAAGTGATTGCCGAAGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCACACTGCCGCCCTGTaGTTCTGGGCTTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSHTAAL*FWACIC
Trigger: GCAGATGCAAGCCCAGAATCACAGGGCGGCAGTGTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTACGTGCACTCGTCCATaGTGCAGCCGGTCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCTCTRP*CSRSGR
Trigger: ACGGCCAGACCGGCTGCATCATGGACGAGTGCACGT...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGATCCTGGCATTGATTTaGATGTCCGTTGCAATTGCA +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVILALI*MSVAIA
Trigger: TGCAATTGCAACGGACATTCAAATCAATGCCAGGAT...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCAGCTGAGACTTaGCCAGGCGGAGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPAAET*PGGAAR
Trigger: GCGAGCAGCTCCGCCTGGTCAAGTCTCAGCTGCAGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATGGCAGAACGGTAGTTaGGCAACTGATTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSWQNGS*ATDSSG
Trigger: ACCTGAGGAATCAGTTGCTCAACTACCGTTCTGCCA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATCTGGAAAAGTCACCTaGAGGCACGTTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSSGKVT*RHVVSL
Trigger: GAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGAGCACGAAGGTCACTaGGTTTGGCTTCGTATTCAT +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAEHEGH*VWLRIH
Trigger: ATGAATACGAAGCCAAACTCAGTGACCTTCGTGCTC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTGGTGTGACCGACGTTaGGGTCCCACCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPWCDRR*GPTCPT
Trigger: AGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGCCCCCGACCAACTTaGAGTAGAGCTCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGPRPT*SRARAG
Trigger: CCCAGCCCGAGCTCTACTGCAAGTTGGTCGGGGGCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCACAGCTGCAGGGGATaGAGCCATCAGGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDHSCRG*SHQGHP
Trigger: TGGATGCCCCTGATGGCTGCATCCCCTGCAGCTGTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTGTGCAGGTGTGGGCTaGCTCACTGCCACGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDCAGVG*LTATGL
Trigger: AAGACCCGTGGCAGTGAGGCAGCCCACACCTGCACA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTTCTGGGCTTGCATCTaGACTGCCCGCTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEFWACI*TARCPG
Trigger: ACCGGGACAGCGGGCAGTGCAGATGCAAGCCCAGAA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCAGGTAGGAGGTGGGTaGGACCCAGGACGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCQVGGG*DPGRAV
Trigger: CACAGCGCGTCCTGGGTCGCACCCACCTCCTACCTG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGATCCGTGGACGGCGTTaGCATAGTAGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEIRGRR*HSSPPG
Trigger: GCCAGGAGGGCTACTATGGCAACGCCGTCCACGGAT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGACATGGGCAGGCCCTaGAGGATCCGTGGACGGCGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCDMGRP*RIRGRR
Trigger: ACGCCGTCCACGGATCCTGCAGGGCCTGCCCATGTC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTTGGCTTGGGCAGCTaGCTCCTGCAGCCGAGCACG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLGLGS*LLQPST
Trigger: CGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGAGCGCAATGTTGGTTTaGAACAAAGATGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVSAMLV*NKDESA
Trigger: TGCAGACTCATCTTTGTTGCAAACCAACATTGCGCT...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGCAGCCCTGTTGGCTaGGTCCTCGGCCGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPGSPVG*VLGRFD
Trigger: ATCAAAGCGGCCGAGGACGCAGCCAACAGGGCTGCC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACATCCACAACTGCCATaGCGATGTAGTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSHPQLP*RCSPGR
Trigger: CCTCCCGGGACTACATCGGCATGGCAGTTGTGGATG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATACAGCCATCCCATGCTaGAGGCTGACCGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDTAIPC*RLTASL
Trigger: CAGTGAGGCGGTCAGCCTGCAGCATGGGATGGCTGT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAACACTGCCCCAGGGCTaGCCCAAAGATCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSETLPQG*PKDPQP
Trigger: TGGCTGTGGATCTTTGGGGCAGCCCTGGGGCAGTGT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR GCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGACTCAGTTTCAAAGGTaGAGGGTGTGTAGCTATAAG +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVTQFQR*RVCSYK
Trigger: CTTATAGCTACACACCCTGCACCTTTGAAACTGAGT...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTGGCCTCTCAGCTCTaGAACCTGCCGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVASQL*NLPRLE
Trigger: CTCCAGCCGCGGCAGGTTCCAGAGCTGAGAGGCCAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACATGCTTCACACTCGTaGCTCTGCTCCCAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHASHS*LCSQAA
Trigger: CGCCGCTTGGGAGCAGAGCCACGAGTGTGAAGCATG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCAGGGTGTGCAGGTGTaGGCTGCCTCACTGCCACGG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLQGVQV*AASLPR
Trigger: CCGTGGCAGTGAGGCAGCCCACACCTGCACACCCTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACGGCAGCCAAGCACATaGGGGCAAAAAGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSRQPST*GQKEAW
Trigger: CCATGCCTCTTTTTGCCCCCATGTGCTTGGCTGCCG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCACGGCTTGCAGCGTaGGAATCCGTAGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSARLAA*ESVVAC
Trigger: ACAGGCCACTACGGATTCCCACGCTGCAAGCCGTGC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACAGCCGGCCATGGGGTaGAAGCTGAATGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSQPAMG*KLNECV
Trigger: GACACACTCATTCAGCTTCCACCCCATGGCCGGCTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCATGGCAGCCTCGATaGTGCCCCTCCTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEAWQPR*CPSWNS
Trigger: ACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATTGGCTGGGTCCAAATaGAATGAGCCTTCTCGACAC +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSLAGSK*NEPSRH
Trigger: GTGTCGAGAAGGCTCATTCCATTTGGACCCAGCCAA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTTGCGGGCAGCTCCTaGAGATCCGCCACCATACTG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVAGSS*RSATIL
Trigger: CAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGCTGCTCGCCCATGGTaGCCAGGTCGTTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCAARPW*PGRSGG
Trigger: CCCTCCTGAACGACCTGGCCACCATGGGCGAGCAGC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGAAGCCCTGCGCTaGCACTCAGGCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPEALR*HSGPAA
Trigger: AGCTGCAGGGCCTGAGTGCCAGCGCAGGGCTTCTGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTTCTCGTAGGCGGTaGCGGCATCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSCSRRR*RHPQHS
Trigger: GCTGTGCTGTGGATGCCGCCACCGCCTACGAGAACA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACATCTTCCAGGTCATTTaGCAGTCGGACTTCGACTCC +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYIFQVI*QSDFDS
Trigger: GGAGTCGAAGTCCGACTGCCAAATGACCTGGAAGAT...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCCTTGGGGAGGCCACTaGTGTGTCCTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDPWGGH*CVLQQL
Trigger: CAGCTGTTGCAGGACACACCAGTGGCCTCCCCAAGG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCTTGGGGAGGCCACTaGTGTGTCCTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPWGGH*CVLQQL
Trigger: CAGCTGTTGCAGGACACACCAGTGGCCTCCCCAAGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGAGGGCTCCATGATTaGCCTGGGTCTTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGGLHD*PGSWEV
Trigger: CACTTCCCAAGACCCAGGCCAATCATGGAGCCCTCC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTGGGAGGGAGGTGCATTaGGTAATCAGTGCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIGREVH*VISAFE
Trigger: TTCAAAAGCACTGATTACCCAATGCACCTCCCTCCC...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTTGTACTGTGTGCCTaGGGACAGGGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVVLCA*GQGRAL
Trigger: CAAAGCCCTCCCCTGTCCTCAGGCACACAGTACAAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTAGGATCCAAGGGCTaGACACCAGCAGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVGSKG*TPAGLA
Trigger: TGCCAAGCCTGCTGGTGTTCAGCCCTTGGATCCTAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCGATGCGGCTCATGTaGTCAATCACAGCACTCCGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSAMRLM*SITALR
Trigger: CCGGAGTGCTGTGATTGATCACATGAGCCGCATCGC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCTCTCAGGGTCACTTaGTTCTGCGGTGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPLRVT*FCGAFK
Trigger: CTTGAAGGCACCGCAGAATCAAGTGACCCTGAGAGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCACTTGGTAAAAATGGATaGCAAAGACGTATCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLALGKNG*QRRIGP
Trigger: TGGGCCGATACGTCTTTGTCATCCATTTTTACCAAG...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAGAGCCATCCTGGCATTaGTTTGAATGTCCGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSEPSWH*FECPLQ
Trigger: TTGCAACGGACATTCAAATCAATGCCAGGATGGCTC...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGTTGTAGACACAGGTaGGCTGGCCATCCACAACTG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGCRHR*AGHPQL
Trigger: CAGTTGTGGATGGCCAGCTCACCTGTGTCTACAACC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGGTTTGTATCTCACCATaGGCTTGCCATCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVVCISP*ACHLLY
Trigger: ATATAGAAGATGGCAAGCTCATGGTGAGATACAAAC...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAACTGGAGGGCTCCATaGTTGGCCTGGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPENWRAP*LAWVLG
Trigger: TCCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAACTGGAGGGCTCCATaGTTGGCCTGGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSNWRAP*LAWVLG
Trigger: TCCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGCTCCTGAGGAAGCTTaGATAGCAAGTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSAPEEA*IASGWW
Trigger: CCACCAGCCACTTGCTATTCAAGCTTCCTCAGGAGC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGGACCAGACGTCCTTTTaGAAGATAAAGAGCCATAAA +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVDQTSF*KIKSHK
Trigger: TTTATGGCTCTTTATCTTTCAAAAGGACGTCTGGTC...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTGGTGTGACCGACGTTaGGGTCCCACCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCWCDRR*GPTCPT
Trigger: AGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAGACTGCTTTGGTGTaGCCGACGTTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDETALV*PTLRSH
Trigger: GTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATAGGTGTAGTGGCTCTTaGGTGCTGGCAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDRCSGS*VLAGGK
Trigger: CTTCCCACCTGCCAGCACTCAAGAGCCACTACACCT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAGGTGTAGTGGCTCTTaGGTGCTGGCAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPERCSGS*VLAGGK
Trigger: CTTCCCACCTGCCAGCACTCAAGAGCCACTACACCT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTCTGTTGTACTGTGTaGCTGAGGACAGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELCCTV*LRTGEG
Trigger: GCCCTCCCCTGTCCTCAGGCACACAGTACAACAGAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTGGGTCACAAGCACTaGTGGAACCTTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLGHKH*WNLGSG
Trigger: CCCACTGCCAAGGTTCCAGCAGTGCTTGTGACCCAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGCCAACCTGTGGGATaGGCAGCCGCAGATGCAATT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGQPVG*AAADAI
Trigger: AATTGCATCTGCGGCTGCGCATCCCACAGGTTGGCC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACACAGCTGCACGGCTTaGAGCGTGGGAATCCGTAGT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHSCTA*SVGIRS
Trigger: ACTACGGATTCCCACGCTGCAAGCCGTGCAGCTGTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTCCTGGAACAGTTaGAGCCTTCGCAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPSWNS*SLRSRP
Trigger: TGGCCGGCTGCGAAGGCTGCAACTGTTCCAGGAGGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCTGGCAGCCTCGATGGTaGCCCTCCTGGAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFWQPRW*PSWNSC
Trigger: GCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCA...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTCATCTCTGTTGCAATTaGAGGGAACACACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIHLCCN*REHTQE
Trigger: TTCCTGAGTGTGTTCCCTGCAATTGCAACAGAGATG...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCACAGTCCCATCTCTGTTaGAATTGCAGGGAACACACT +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSQSHLC*NCREHT
Trigger: AGTGTGTTCCCTGCAATTGCAACAGAGATGGGACTG...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCACAGCAAGTGCTATaGGCCCACTTCCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPQQVL*AHFLCQ
Trigger: CTGACACAGGAAGTGGGCGCATAGCACTTGCTGTGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTGTGTACCCAGCTTTaGAGGAGCACCGCACGTCTC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLCTQL*RSTARL
Trigger: GAGACGTGCGGTGCTCCTGCAAAGCTGGGTACACAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTGTGTACCCAGCTTTaGAGGAGCACCGCACGTCTC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELCTQL*RSTARL
Trigger: GAGACGTGCGGTGCTCCTGCAAAGCTGGGTACACAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCAGGGGATGACAGCTaGCCAGCTGGCCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESGDDS*PAGHCC
Trigger: ACAGCAATGGCCAGCTGGGCAGCTGTCATCCCCTGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCATGTGCCTCATCTaGTCCAGAAGCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSMCLI*SRSPAL
Trigger: CAGCGCAGGGCTTCTGGAGCAGATGAGGCACATGGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCCATGTGCCTCATCTaGTCCAGAAGCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSMCLI*SRSPAL
Trigger: CAGCGCAGGGCTTCTGGAGCAGATGAGGCACATGGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCCTGGGTCTCCATGTaGCTCATCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDAWVSM*LICSRS
Trigger: GCTTCTGGAGCAGATGAGGCACATGGAGACCCAGGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCCTGGGTCTCCATGTaGCTCATCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSAWVSM*LICSRS
Trigger: GCTTCTGGAGCAGATGAGGCACATGGAGACCCAGGC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATTCAAGCCATTTGCCTaGTTGGCTTGGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSFKPFA*LAWAAA
Trigger: GGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACCGCGCGTGCTTTTCTaGCTCCTCCACAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEPRVLF*LLHKGC
Trigger: ACATCCCTTGTGGAGGAGGCAGAAAAGCACGCGCGG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCGCGCGTGCTTTTCTaGCTCCTCCACAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPRVLF*LLHKGC
Trigger: ACATCCCTTGTGGAGGAGGCAGAAAAGCACGCGCGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGAGGGCAGATTCAGATaGACTGGCAGCCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEEGRFR*TGSPVG
Trigger: GCCAACAGGGCTGCCAGTGCATCTGAATCTGCCCTC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCATCCACAACTGCCATaGCGATGTAGTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDHPQLP*RCSPGR
Trigger: CCTCCCGGGACTACATCGGCATGGCAGTTGTGGATG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTGGCCATCCACAACTaGCATGCCGATGTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLAIHN*HADVVP
Trigger: CGGGACTACATCGGCATGGCAGTTGTGGATGGCCAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTGGCCATCCACAACTaGCATGCCGATGTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELAIHN*HADVVP
Trigger: CGGGACTACATCGGCATGGCAGTTGTGGATGGCCAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTAGTGGCTCTTGAGTaGTGGCAGGTGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVVALE*WQVGRG
Trigger: TCCCCTTCCCACCTGCCAGCACTCAAGAGCCACTAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCGCCGAGTGACAGTTaGATCTCGCTGGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPPSDS*ISLGFG
Trigger: TCCAAAGCCCAGCGAGATCCAACTGTCACTCGGCGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAATCAGGGGCATCCACTaGAACCCCATAAGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSIRGIH*NPIRAV
Trigger: TACCGCCCTTATGGGGTTCCAGTGGATGCCCCTGAT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGTCACAAGCACTGCTaGAACCTTGGCAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGHKHC*NLGSGG
Trigger: TCCCCCACTGCCAAGGTTCCAGCAGTGCTTGTGACC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGGGCCCACTGCACATaGAGGACAATGCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRAHCT*RTMPHQ
Trigger: TTGGTGGGGCATTGTCCTCCATGTGCAGTGGGCCCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGTATCGGCCCAGGTGTaGTACACGTCCTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSVSAQV*YTSSQG
Trigger: ACCCTGAGAGGACGTGTACCACACCTGGGCCGATAC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTATCGGCCCAGGTGTaGTACACGTCCTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVSAQV*YTSSQG
Trigger: ACCCTGAGAGGACGTGTACCACACCTGGGCCGATAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCACGGCTTGCAGCGTaGGAATCCGTAGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPARLAA*ESVVAC
Trigger: ACAGGCCACTACGGATTCCCACGCTGCAAGCCGTGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCAGCCGGTCTGGCCGTaGGGTGTTTGTCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSQPVWP*GVCLLI
Trigger: TATGAGGAGACAAACACCCCACGGCCAGACCGGCTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGATGATGCAGCCGGTCTaGCCGTGGGGTGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEMMQPV*PWGVCL
Trigger: GAGACAAACACCCCACGGCCAGACCGGCTGCATCAT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTCCTCCCTAGACACTaGGGCACGGCTGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLLPRH*GTAAGM
Trigger: CATGCCAGCAGCCGTGCCCCAGTGTCTAGGGAGGAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTTAGTGTGAGGACATaGGCAGGCCCTGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVSVRT*AGPAGS
Trigger: GGATCCTGCAGGGCCTGCCCATGTCCTCACACTAAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGAGCTGCTCGCCCATaGTGGCCAGGTCGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGAARP*WPGRSG
Trigger: TCCTGAACGACCTGGCCACCATGGGCGAGCAGCTCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGATTCCTCAGGTCCTTaGCCTGGGTCTCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEDSSGP*PGSPCA
Trigger: GGCACATGGAGACCCAGGCCAAGGACCTGAGGAATC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCCCTCATCATGCGCTaGGCTTCAGCCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSLIMR*ASAHSL
Trigger: CAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGGGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAGCCATTTGCCTGCTTaGCTTGGGCAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESHLPA*LGQLPP
Trigger: AGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCCATTTGCCTGCTTaGCTTGGGCAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSHLPA*LGQLPP
Trigger: AGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGTGTCCTGCAACAGCTaGTTGATACGAAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAVSCNS*LIRKVL
Trigger: CAAGACTTTTCGTATCAACCAGCTGTTGCAGGACAC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCTTGGGGAGGCCACTaGTGTGTCCTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPWGGH*CVLQQL
Trigger: CAGCTGTTGCAGGACACACCAGTGGCCTCCCCAAGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCCTTTTCCCCATCATaGCCAAACACCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPFSPS*PNTTVC
Trigger: GCACACGGTGGTGTTTGGCCATGATGGGGAAAAGGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGACTGACAGGCCCCTaGACTTCCAAGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSRLTGP*TSKASV
Trigger: CACTGAAGCCTTGGAAGTCCAGGGGCCTGTCAGTCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
3UTR CAA 72 bp AGAAGTGAGTCCTCCATCCCACTGACTTTGGTTAGCTaGCCATATGAAGCTTCAGTGATGGTGCGTTACATC +
Preference number: 4 (lower is better)
Translates to: RSESSIPLTLVS*PYEASVMVRYI
Trigger: GATGTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGATGGAGGACTCACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACATCATCATCCCGGGTaGCAGCCATATTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHHHPG*QPYLPP
Trigger: GGGAGGCAAATATGGCTGTCACCCGGGATGATGATG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGCTGGGCTTTGGAGATaGGGTGTCCAAGAAGCGTAT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSAGLWR*GVQEAY
Trigger: ATACGCTTCTTGGACACCTCATCTCCAAAGCCCAGC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCACATGGGACTTGCAGTaGCAGTCACCATCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSTWDLQ*QSPSPC
Trigger: GCAGGGAGATGGTGACTGTCACTGCAAGTCCCATGT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAGGCACATGGTTCTGTaGCTGGCAGCTGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSERHMVL*LAAAVQ
Trigger: CTGTACTGCAGCTGCCAGTCACAGAACCATGTGCCT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCAACCACAAACAGCTaGGCTGCCTCCGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSTTNS*AASVEY
Trigger: GTATTCCACGGAGGCAGCTCAGCTGTTTGTGGTTGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGGGCCATGTGTCCCTTaGGCTGAATGTCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDGPCVP*AECLHL
Trigger: CAGATGCAGACATTCAGCTCAAGGGACACATGGCCC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAACATCAACAGAAGGTaGCGACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSENINRR*RLLGQV
Trigger: CACCTGCCCCAGCAGTCGTCACCTTCTGTTGATGTT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCCTCTCAGGGTCACTTaGTTCTGCGGTGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDPLRVT*FCGAFK
Trigger: CTTGAAGGCACCGCAGAATCAAGTGACCCTGAGAGG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCTTCGGCAATCACTTaGTCCCGGCAGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPSAIT*SRQPST
Trigger: TGTGCTTGGCTGCCGGGATCAAGTGATTGCCGAAGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCACACTGCCGCCCTGTaGTTCTGGGCTTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLHTAAL*FWACIC
Trigger: GCAGATGCAAGCCCAGAATCACAGGGCGGCAGTGTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAACATGTGCTGACCAGTaGGCTGTACATCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSTCADQ*AVHPAS
Trigger: AGAAGCCGGATGTACAGCTCACTGGTCAGCACATGT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCAAAGCTGTTAGTGTaGGGACATGGGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPAKLLV*GHGQAL
Trigger: CAGGGCCTGCCCATGTCCTCACACTAACAGCTTTGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTTGGTTAGATACTTGGTaGAATCACTCTGCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIWLDTW*NHSAGN
Trigger: ATTCCCTGCAGAGTGATTTCACCAAGTATCTAACCA...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTGTCTGGATGGGGTTaGGCCCATCCAGAACCTCAT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELSGWG*AHPEPH
Trigger: ATGAGGTTCTGGATGGGCTCAACCCCATCCAGACAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGTTGTAGACACAGGTaGGCTGGCCATCCACAACTG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGCRHR*AGHPQL
Trigger: CAGTTGTGGATGGCCAGCTCACCTGTGTCTACAACC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAACCATCTTCCAGAGTaGCCTGCAGGTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSNHLPE*PAGSLS
Trigger: GGACAAGGAACCTGCAGGTCACTCTGGAAGATGGTT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACGGGACACATCTCTCTTaGGAGAGTTACTGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYGTHLS*ESYWSN
Trigger: ATTTGACCAGTAACTCTCTCAAGAGAGATGTGTCCC...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGGTCTTGGGAAGTGGTaGGCAAGCATCTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDGLGKW*ASILPH
Trigger: GTGTGGCAAGATGCTTGCTCACCACTTCCCAAGACC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAACTGGAGGGCTCCATaGTTGGCCTGGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPNWRAP*LAWVLG
Trigger: TCCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTCCACAGCAAACTGTaGCCTGGGTTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVHSKL*PGFQQL
Trigger: GAGCTGCTGAAACCCAGGTCACAGTTTGCTGTGGAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGACACCCCGAAGCTTaGAGAAGGGGTATACAAGGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSRHPEA*RRGIQG
Trigger: CCCTTGTATACCCCTTCTTCAAGCTTCGGGGTGTCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGTATTAGGATCCCAGTaGGACTTCTTGGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSVLGSQ*DFLGGC
Trigger: GCATCCGCCCAAGAAGTCTCACTGGGATCCTAATAC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGACTGCTTTGGTGTaGCCGACGTTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPETALV*PTLRSH
Trigger: GTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGACAACCATTCAGACTaGCAGGCCCCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEDNHSD*QAPGLP
Trigger: TGGAAGTCCAGGGGCCTGTCAGTCTGAATGGTTGTC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGACAACCATTCAGACTaGCAGGCCCCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSDNHSD*QAPGLP
Trigger: TGGAAGTCCAGGGGCCTGTCAGTCTGAATGGTTGTC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCACCCTTTGCTGCTGTaGACTGTAGCCCAGACACTG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSHPLLL*TVAQTL
Trigger: CAGTGTCTGGGCTACAGTTCACAGCAGCAAAGGGTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGACAGGGGAGGGCTTTaGCACCAACGTTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEDRGGL*HQRSDP
Trigger: TGGATCTGAACGTTGGTGGCAAAGCCCTCCCCTGTC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCCCACAGGTGTGGTaGTGGCATTCACACCGAAAC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSPQVW*WHSHRN
Trigger: GTTTCGGTGTGAATGCCAGCACCACACCTGTGGGGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACACCCACATGGGACTTaGAGTGACAGTCACCATCTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSHPHGT*SDSHHL
Trigger: GAGATGGTGACTGTCACTGCAAGTCCCATGTGGGTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGCACATGGAGGACAATaGCCCACCAATGTCACACTG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSAHGGQ*PTNVTL
Trigger: CAGTGTGACATTGGTGGGGCATTGTCCTCCATGTGC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCACAGCTGCACGGCTTaGAGCGTGGGAATCCGTAGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPHSCTA*SVGIRS
Trigger: ACTACGGATTCCCACGCTGCAAGCCGTGCAGCTGTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGAGGGCAGCGGCACTaGCCCGTCATCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGGQRH*PVISSQ
Trigger: TTGTGAAGAGATGACGGGGCAGTGCCGCTGCCCTCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTGGCAGCCTCGATGGTaGCCCTCCTGGAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLWQPRW*PSWNSC
Trigger: GCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTTCTGGGCTTGCATCTaGACTGCCCGCTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCFWACI*TARCPG
Trigger: ACCGGGACAGCGGGCAGTGCAGATGCAAGCCCAGAA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGCACATCGGTCACACTaGCGCCCTGTGATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCAHRSH*RPVILG
Trigger: GCCCAGAATCACAGGGCGGCAGTGTGACCGATGTGC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGATGTCCACTCTGTCTaGTGTCTCCAGGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPDVHSV*CLQVPA
Trigger: GGCTGGCACCTGGAGACAGCAGACAGAGTGGACATC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAATGTCCGTTGCAATTaGAGGGAACACACCGTCCGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSNVRCN*REHTVR
Trigger: CCGGACGGTGTGTTCCCTGCAATTGCAACGGACATT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGATCCGTGGACGGCGTTaGCATAGTAGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLIRGRR*HSSPPG
Trigger: GCCAGGAGGGCTACTATGGCAACGCCGTCCACGGAT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCTCCATGTGCCTCATCTaGTCCAGAAGCCCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFSMCLI*SRSPAL
Trigger: CAGCGCAGGGCTTCTGGAGCAGATGAGGCACATGGA...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGCCTGGGTCTCCATGTaGCTCATCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFAWVSM*LICSRS
Trigger: GCTTCTGGAGCAGATGAGGCACATGGAGACCCAGGC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCCTGGTGGGTTTTCTaGCAGGTCCTTATCCGGTTC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPWWVF*QVLIRF
Trigger: GAACCGGATAAGGACCTGGCAGAAAACCCACCAGGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTTCAAGCCATTTGCCTaGTTGGCTTGGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEFKPFA*LAWAAA
Trigger: GGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATTGGTTCAAGCCATTTaGCTGCTTGGCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSLVQAI*LLGLGS
Trigger: GCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCGCGCGTGCTTTTCTaGCTCCTCCACAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPRVLF*LLHKGC
Trigger: ACATCCCTTGTGGAGGAGGCAGAAAAGCACGCGCGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTAAGGACCGCGCGTaGTTTTCTGCCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSCKDRA*FSASST
Trigger: TGTGGAGGAGGCAGAAAAGCACGCGCGGTCCTTACA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGAGGGCAGATTCAGATaGACTGGCAGCCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFEGRFR*TGSPVG
Trigger: GCCAACAGGGCTGCCAGTGCATCTGAATCTGCCCTC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATCTTCAAATTTTTCATaGAGCCTCGGAAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSSSNFS*SLGKQA
Trigger: CGCCTGCTTTCCGAGGCTGCATGAAAAATTTGAAGA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGTGAGCAAGCATCTTaGCACACCTTCACGCTCCTT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGEQAS*HTFTLL
Trigger: AAGGAGCGTGAAGGTGTGGCAAGATGCTTGCTCACC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTGACTGCCACCGAGTaGCACTGTCCATCACACAGA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVTATE*HCPSHR
Trigger: TCTGTGTGATGGACAGTGGCACTCGGTGGCAGTCAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTAGTGGCTCTTGAGTaGTGGCAGGTGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPVVALE*WQVGRG
Trigger: TCCCCTTCCCACCTGCCAGCACTCAAGAGCCACTAC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCCACAGCCATCCCATaGTGCAGGCTGACCGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSTAIP*CRLTAS
Trigger: TGAGGCGGTCAGCCTGCAGCATGGGATGGCTGTGGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTTGGCTGCCACCGAGTaGCACTGTCCATCACACAGA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELAATE*HCPSHR
Trigger: TCTGTGTGATGGACAGTGGCACTCGGTGGCAGCCAA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588004.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCACAGAACTGGCCCTaGATGGTGTGGCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSQNWP*MVWPLP
Trigger: AGGCAGCGGCCACACCATCCAGGGCCAGTTCTGTGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTGCTGGCATGGCCGTaGCAGTTGCATGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELLAWP*QLHASH
Trigger: GTGTGAAGCATGCAACTGCCACGGCCATGCCAGCAA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACACAGGCACCGTCCGTaGGCATCACATATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHRHRP*ASHISG
Trigger: CCCTGAAATATGTGATGCCCACGGACGGTGCCTGTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCCTGCGTAGGCACATaGTTCTGTGACTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSCVGT*FCDWQL
Trigger: CAGCTGCCAGTCACAGAACCATGTGCCTACGCAGGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCACTGCCACGGGTCTTaGCTCCCCATCAAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPHCHGS*LPIKQE
Trigger: TTCCTGCTTGATGGGGAGCCAAGACCCGTGGCAGTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTAGTGGCCAACCTGTaGGATGCGCAGCCGCAGATG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVVANL*DAQPQM
Trigger: CATCTGCGGCTGCGCATCCCACAGGTTGGCCACTAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGGCAAAAAGAGGCATaGAAGGAGCCTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGQKEA*KEPARG
Trigger: GCCACGGGCAGGCTCCTTCCATGCCTCTTTTTGCCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAAATTCTTACAGAATCTaGAGGCTGTCTGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSNSYRI*RLSGGQ
Trigger: TTGACCCCCAGACAGCCTCCAGATTCTGTAAGAATT...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCGATGGTGCCCCTCCTaGAACAGTTGCAGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCRWCPS*NSCSLR
Trigger: GCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGCATGGCAGCCTCGATaGTGCCCCTCCTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLAWQPR*CPSWNS
Trigger: ACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTTGCGGGCAGCTCCTaGAGATCCGCCACCATACTG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVAGSS*RSATIL
Trigger: CAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGATTCCTCAGGTCCTTaGCCTGGGTCTCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFDSSGP*PGSPCA
Trigger: GGCACATGGAGACCCAGGCCAAGGACCTGAGGAATC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCCCTCATCATGCGCTaGGCTTCAGCCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSLIMR*ASAHSL
Trigger: CAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGGGA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATTGTTCTCCCCCTGGTaGGTTTTCTGCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSLFSPW*VFCQVL
Trigger: AAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCATTGTTCTCCCCCTaGTGGGTTTTCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPLFSP*WVFCQV
Trigger: GACCTGGCAGAAAACCCACCAGGGGGAGAACAATGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACCATTGTTCTCCCCCTaGTGGGTTTTCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEPLFSP*WVFCQV
Trigger: GACCTGGCAGAAAACCCACCAGGGGGAGAACAATGG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTTTTGCCAGCAGATCTaGAAAGTTCTCTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVFCQQI*KVLLLC
Trigger: ACAAAGTAAGAGAACTTTCCAGATCTGCTGGCAAAA...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTGTTCTCGTAGGCGGTaGCGGCATCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLCSRRR*RHPQHS
Trigger: GCTGTGCTGTGGATGCCGCCACCGCCTACGAGAACA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTGTTCTCGTAGGCGGTaGCGGCATCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCCSRRR*RHPQHS
Trigger: GCTGTGCTGTGGATGCCGCCACCGCCTACGAGAACA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCAGATTCAGATGCACTaGCAGCCCTGTTGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEQIQMH*QPCWLR
Trigger: ACGCAGCCAACAGGGCTGCCAGTGCATCTGAATCTG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGACAGCAACCTTACTaGCAGCATCTCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGQQPY*QHLWPA
Trigger: AGCAGGCCAGAGATGCTGCCAGTAAGGTTGCTGTCC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGGACAGCAACCTTACTaGCAGCATCTCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDGQQPY*QHLWPA
Trigger: AGCAGGCCAGAGATGCTGCCAGTAAGGTTGCTGTCC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGGGATGGGAGCATGTaGTTGAGTTGGAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSWDGSM*LSWNSS
Trigger: GCTCGAGTTCCAACTCAACCACATGCTCCCATCCCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCACCTTCACGCTCCTTaGGGAGGCCACTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLHLHAP*GGHWCV
Trigger: GACACACCAGTGGCCTCCCCAAGGAGCGTGAAGGTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCCTTTTCCCCATCATaGCCAAACACCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPFSPS*PNTTVC
Trigger: GCACACGGTGGTGTTTGGCCATGATGGGGAAAAGGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCCCTTTTCCCCATCATaGCCAAACACCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDPFSPS*PNTTVC
Trigger: GCACACGGTGGTGTTTGGCCATGATGGGGAAAAGGG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAGACTGACAGGCCCCTaGACTTCCAAGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPERLTGP*TSKASV
Trigger: CACTGAAGCCTTGGAAGTCCAGGGGCCTGTCAGTCT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATAGAATGATCTCGAGCTaGGGAGGGAGGTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDRMISS*GGRCIG
Trigger: CCCAATGCACCTCCCTCCCCAGCTCGAGATCATTCT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCAGGGCTACAACCCTaGCTGGGTCTAAACTCCACA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPGLQP*LGLNST
Trigger: TGTGGAGTTTAGACCCAGCCAGGGTTGTAGCCCTGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAATAATACCGCCGAGTaGCAGTTGGATCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSNNTAE*QLDLAG
Trigger: CCCAGCGAGATCCAACTGTCACTCGGCGGTATTATT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCACCCCAAATTGGAGTTaGTGGTACCAGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSTPNWS*WYQLGH
Trigger: GTGACCCAGCTGGTACCATCAACTCCAATTTGGGGT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGGGTGGAAGCTGAATaGGTGTGTCTCACACACCTC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPGVEAE*VCLTHL
Trigger: GAGGTGTGTGAGACACACTCATTCAGCTTCCACCCC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCATGGGGTGGAAGCTaGATGAGTGTGTCTCACACA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPWGGS*MSVSHT
Trigger: TGTGTGAGACACACTCATTCAGCTTCCACCCCATGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACCATGGGGTGGAAGCTaGATGAGTGTGTCTCACACA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEPWGGS*MSVSHT
Trigger: TGTGTGAGACACACTCATTCAGCTTCCACCCCATGG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGCTGGTACAACCCTTaGGATTGGCTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSWYNP*DWLGPN
Trigger: ATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGCTGCTGGCATGTCTaGAGTTTCCCTCGACCACGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGCWHV*SFPRPR
Trigger: ACGTGGTCGAGGGAAACTTCAGACATGCCAGCAGCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGCTGCTGGCATGTCTaGAGTTTCCCTCGACCACGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGCWHV*SFPRPR
Trigger: ACGTGGTCGAGGGAAACTTCAGACATGCCAGCAGCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCCTTTGAGTCTCTGTaGAGTAGAGGCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEAFESL*SRGLGC
Trigger: GCATCCAAGGCCTCTACTTCACAGAGACTCAAAGGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGCAAAGCTGTTAGTGTaGGGACATGGGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCAKLLV*GHGQAL
Trigger: CAGGGCCTGCCCATGTCCTCACACTAACAGCTTTGC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGGCAGAACGGTAGTTaGGCAACTGATTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSWQNGS*ATDSSG
Trigger: ACCTGAGGAATCAGTTGCTCAACTACCGTTCTGCCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGTCGTTGGCCTTTCTaGCCATGCTCTTTGCACTAC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSCRWPF*PCSLHY
Trigger: GTAGTGCAAAGAGCATGGTCAGAAAGGCCAACGACA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR TCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTGGAGTTTTCCAATTTTaGTCTGAATCGAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIGVFQF*SESNGL
Trigger: GAGACCATTCGATTCAGATCAAAATTGGAAAACTCC...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCCTCCTCTGGAGAATaGGGCAGATCGCACAAGCTT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSSSGE*GRSHKL
Trigger: AAGCTTGTGCGATCTGCCTCATTCTCCAGAGGAGGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGTCTGAAATCCAAATaGGGCCTGGAGGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGLKSK*GLEVVS
Trigger: ACTGACCACCTCCAGGCCTCATTTGGATTTCAGACC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAGGTCTGAAATCCAAATaGGGCCTGGAGGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRGLKSK*GLEVVS
Trigger: ACTGACCACCTCCAGGCCTCATTTGGATTTCAGACC...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAACCATCTTCCAGAGTaGCCTGCAGGTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSENHLPE*PAGSLS
Trigger: GGACAAGGAACCTGCAGGTCACTCTGGAAGATGGTT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAAACCATCTTCCAGAGTaGCCTGCAGGTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRNHLPE*PAGSLS
Trigger: GGACAAGGAACCTGCAGGTCACTCTGGAAGATGGTT...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAACCATCTTCCAGAGTaGCCTGCAGGTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSNHLPE*PAGSLS
Trigger: GGACAAGGAACCTGCAGGTCACTCTGGAAGATGGTT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGAAGCTGGTCATCGATaGGAAGCCGTAGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSEAGHR*EAVVQS
Trigger: ACTCTGGACTACGGCTTCTCATCGATGACCAGCTTC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAAGCTGGTCATCGATaGGAAGCCGTAGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDEAGHR*EAVVQS
Trigger: ACTCTGGACTACGGCTTCTCATCGATGACCAGCTTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCTCCTGAGGAAGCTTaGATAGCAAGTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPAPEEA*IASGWW
Trigger: CCACCAGCCACTTGCTATTCAAGCTTCCTCAGGAGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTTCTTAGTGCCCGTGTaGAACACCAGTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDFLVPV*NTSPLE
Trigger: CTCCAGAGGACTGGTGTTTCACACGGGCACTAAGAA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCTTAGTGCCCGTGTaGAACACCAGTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSFLVPV*NTSPLE
Trigger: CTCCAGAGGACTGGTGTTTCACACGGGCACTAAGAA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGTATTAGGATCCCAGTaGGACTTCTTGGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSVLGSQ*DFLGGC
Trigger: GCATCCGCCCAAGAAGTCTCACTGGGATCCTAATAC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAAGTGCTTCCCGGGCTaGCTTCCGATGTGTATTAGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSKCFPG*LPMCIR
Trigger: CCTAATACACATCGGAAGTCAGCCCGGGAAGCACTT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAAGTGCTTCCCGGGCTaGCTTCCGATGTGTATTAGG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEKCFPG*LPMCIR
Trigger: CCTAATACACATCGGAAGTCAGCCCGGGAAGCACTT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGAGACTGCTTTGGTGTaGCCGACGTTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCETALV*PTLRSH
Trigger: GTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGTTTGTGTCCTGAGTaGAGAATGATCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGLCPE*RMISSW
Trigger: CCAGCTCGAGATCATTCTTCACTCAGGACACAAACC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGCCACATGGAAGAGCTaGCCCAGATCCAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCATWKS*PRSKVR
Trigger: CCTCACCTTGGATCTGGGGCAGCTCTTCCATGTGGC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCTGATTGTACCCTGTaGAGCAGCGATCACACGTCT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSDCTL*SSDHTS
Trigger: AGACGTGTGATCGCTGCTGCACAGGGTACAATCAGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCGTGGAAATTTGGCTTaGAGTGACAGCGGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRGNLA*SDSGLN
Trigger: GTTCAGGCCGCTGTCACTGCAAGCCAAATTTCCACG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTCCAGTCACTGAGCTaGAGGGCATCTGGTAGGATC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPVQSLS*RASGRI
Trigger: GATCCTACCAGATGCCCTGCAGCTCAGTGACTGGAC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCGCCTTATGGCACTTaGATTCTGAACATCCACTGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPPYGT*ILNIHW
Trigger: CCAGTGGATGTTCAGAATGCAAGTGCCATAAGGCGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCTTGGGGAGGTCCTaGGTAGGCACATGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSFLGRS*VGTWFC
Trigger: ACAGAACCATGTGCCTACGCAGGACCTCCCCAAGAA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAATGTTCACCTGGCCTaGCAGAACAGACCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPNVHLA*QNRPGA
Trigger: AGCTCCGGGTCTGTTCTGGCAGGCCAGGTGAACATT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTCACTTGATTCTGCGGTaGCTTCAAGGTGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCHLILR*LQGDPR
Trigger: CCTGGGGTCACCTTGAAGGCACCGCAGAATCAAGTG...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCTCTGCTGTCTCCAGGTaGCAGCCCAGCATATCCACA +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFSAVSR*QPSIST
Trigger: TGTGGATATGCTGGGCTGGCACCTGGAGACAGCAGA...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGATGTCCACTCTGTCTaGTGTCTCCAGGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLDVHSV*CLQVPA
Trigger: GGCTGGCACCTGGAGACAGCAGACAGAGTGGACATC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGCCCAGCTGGCCATTaGTGTTACAACTGCATGGTT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSCPAGH*CYNCMV
Trigger: AACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTGGTTCAAGCCATTTaGCTGCTTGGCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELVQAI*LLGLGS
Trigger: GCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTGTAAGGACCGCGCGTaGTTTTCTGCCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPCKDRA*FSASST
Trigger: TGTGGAGGAGGCAGAAAAGCACGCGCGGTCCTTACA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGAGGGCAGATTCAGATaGACTGGCAGCCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLEGRFR*TGSPVG
Trigger: GCCAACAGGGCTGCCAGTGCATCTGAATCTGCCCTC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACCCAGACGCAGAGACTaGCGGGAACTTGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEPRRRD*RELEMC
Trigger: ACACATTTCAAGTTCCCGGCAGTCTCTGCGTCTGGG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTACAACCCTCAAAATTaGTCCCGCCCAGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEYNPQN*SRPDAE
Trigger: CTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCCACTGGTGTGTCCTaGAACAGCTGGTTGATACGA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEATGVS*NSWLIR
Trigger: TCGTATCAACCAGCTGTTGCAGGACACACCAGTGGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCCACTGGTGTGTCCTaGAACAGCTGGTTGATACGA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEATGVS*NSWLIR
Trigger: TCGTATCAACCAGCTGTTGCAGGACACACCAGTGGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAACATGTAGCACTGAATaGCAAAGTGATGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSTCSTE*QSDGYP
Trigger: TGGATACCCATCACTTTGGCATTCAGTGCTACATGT...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AGTTTGATGGAGAGAAAACAGTTAAGCCAATGTTTTACCTTATGGCAAAGATGGCACCCTTTCAGGGCCTaGGTCTCAACCTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SLMERKQLSQCFTLWQRWHPFRA*VSTCTF
Trigger: AAAGGTGCAGGTTGAGACGCAGGCCCTGAAAGGGTG...CCATCTTTGCCATAAGGTAAAACATTGGCTTAACTGTTTTCTCTCCATCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590104.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTCTCCCCACAGGTGTaGTGCTGGCATTCACACCGA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVSPQV*CWHSHR
Trigger: TCGGTGTGAATGCCAGCACCACACCTGTGGGGAGAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTTGATGGTACCAGCTaGGTCACAAGCACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVDGTS*VTSTAG
Trigger: TCCAGCAGTGCTTGTGACCCAGCTGGTACCATCAAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTGTTTTCAGGCCGCTaGCACACCTTTCCCACGACA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELFSGR*HTFPTT
Trigger: TGTCGTGGGAAAGGTGTGCCAGCGGCCTGAAAACAA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGACATGGTTCTGTGACTaGCAGCTGCAGTACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPETWFCD*QLQYRG
Trigger: GCCTCTGTACTGCAGCTGCCAGTCACAGAACCATGT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAAGCAGGAAGTGTCTaGCCTCACAAGCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPQAGSV*PHKPGY
Trigger: GTACCCTGGCTTGTGAGGCCAGACACTTCCTGCTTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCGGCAGCCAAGCACATaGGGGCAAAAAGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLRQPST*GQKEAW
Trigger: CCATGCCTCTTTTTGCCCCCATGTGCTTGGCTGCCG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACAAGGACTTTCCTTCTaGAACCTTCACAGTTGCGGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSQGLSF*NLHSCG
Trigger: GCCGCAACTGTGAAGGTTCCAGAAGGAAAGTCCTTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGGCCACCAGGGACCTaGCGGAATTCTTACAGAATC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRPPGT*RNSYRI
Trigger: GATTCTGTAAGAATTCCGCCAGGTCCCTGGTGGCCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCAGCCGGTCTGGCCGTaGGGTGTTTGTCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCQPVWP*GVCLLI
Trigger: TATGAGGAGACAAACACCCCACGGCCAGACCGGCTG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTTAGTGTGAGGACATaGGCAGGCCCTGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVSVRT*AGPAGS
Trigger: GGATCCTGCAGGGCCTGCCCATGTCCTCACACTAAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGATTCCTCAGGTCCTTaGCCTGGGTCTCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCDSSGP*PGSPCA
Trigger: GGCACATGGAGACCCAGGCCAAGGACCTGAGGAATC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACTTCAGCCCACTCTCTaGAAAAGTCACCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSLQPTL*KSHLKA
Trigger: TGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCCCTCATCATGCGCTaGGCTTCAGCCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSLIMR*ASAHSL
Trigger: CAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGGGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTGTTCTCCCCCTGGTaGGTTTTCTGCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELFSPW*VFCQVL
Trigger: AAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTTTCCACATCTGTCTaGATGGGGTTGAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLSTSV*MGLSPS
Trigger: GGATGGGCTCAACCCCATCCAGACAGATGTGGAAAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGACTCCGGGTGTTTCTaGTTTACTGGATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSDSGCF*FTGCGS
Trigger: GGAGCCACATCCAGTAAACCAGAAACACCCGGAGTC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATGGGATGGGAGCATGTaGTTGAGTTGGAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEWDGSM*LSWNSS
Trigger: GCTCGAGTTCCAACTCAACCACATGCTCCCATCCCA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGTCCAAAGGTTGGGATaGGAGCATGTGGTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSVQRLG*EHVVEL
Trigger: CAACTCAACCACATGCTCCCATCCCAACCTTTGGAC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGCCGCCGCTATCGCTaGTGCTCAATTCAATGTAAC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGRRYR*CSIQCN
Trigger: GTTACATTGAATTGAGCACCAGCGATAGCGGCGGCC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGCCGCCGCTATCGCTaGTGCTCAATTCAATGTAAC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGRRYR*CSIQCN
Trigger: GTTACATTGAATTGAGCACCAGCGATAGCGGCGGCC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAGGCCGCCGCTATCGCTaGTGCTCAATTCAATGTAAC +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRGRRYR*CSIQCN
Trigger: GTTACATTGAATTGAGCACCAGCGATAGCGGCGGCC...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGCCGCCGCTATCGCTaGTGCTCAATTCAATGTAAC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGRRYR*CSIQCN
Trigger: GTTACATTGAATTGAGCACCAGCGATAGCGGCGGCC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGAGGGCTCCATGATTaGCCTGGGTCTTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGGLHD*PGSWEV
Trigger: CACTTCCCAAGACCCAGGCCAATCATGGAGCCCTCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAATAGCAAGTGGCTGGTaGGAATGTCCCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSIASGW*ECPQTG
Trigger: TCCAGTTTGGGGACATTCCCACCAGCCACTTGCTAT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGCTTGAATAGCAAGTaGCTGGTGGGAATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSLNSK*LVGMSP
Trigger: TGGGGACATTCCCACCAGCCACTTGCTATTCAAGCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCAGCAAACTGTGACCTaGGTTTCAGCAGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSQQTVT*VSAAPE
Trigger: CTCAGGAGCTGCTGAAACCCAGGTCACAGTTTGCTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCCAGTGAGACTTCTTaGGCGGATGCTGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPSETS*ADAENK
Trigger: CTTGTTTTCAGCATCCGCCCAAGAAGTCTCACTGGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAGACTGACAGGCCCCTaGACTTCCAAGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPRLTGP*TSKASV
Trigger: CACTGAAGCCTTGGAAGTCCAGGGGCCTGTCAGTCT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGACTGGTCTCGAACTCTTaGCCTCAAGCAACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRLVSNS*PQATLL
Trigger: CAAGAGGGTTGCTTGAGGCCAAGAGTTCGAGACCAG...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
3UTR CAA 72 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTaGTGCCCTCAAGGAATTGATCATCATAATCTAGAC +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGS*CPQGIDHHNLD
Trigger: GTCTAGATTATGATGATCAATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR CAA 72 bp GATAAAACTAGAAGTGAGTCCTCCATCCCACTGACTTaGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: DKTRSESSIPLT*VSLPYEASVMV
Trigger: CACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGATGGAGGACTCACTTCTAGTTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGACACTGTCCAGTCACTaGGCTGCAGGGCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLTLSSH*AAGHLV
Trigger: TACCAGATGCCCTGCAGCTCAGTGACTGGACAGTGT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGGGTGGAAGCTGAATaGGTGTGTCTCACACACCTC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGVEAE*VCLTHL
Trigger: GAGGTGTGTGAGACACACTCATTCAGCTTCCACCCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCTGGTACAACCCTTaGGATTGGCTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSWYNP*DWLGPN
Trigger: ATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGAGGTAACCACCATATaGAGAAACCTTGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEEVTTI*RNLVPQ
Trigger: CTGGGGGACAAGGTTTCTTCATATGGTGGTTACCTC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAGGTAACCACCATATaGAGAAACCTTGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDEVTTI*RNLVPQ
Trigger: CTGGGGGACAAGGTTTCTTCATATGGTGGTTACCTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCCTTTGAGTCTCTGTaGAGTAGAGGCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPAFESL*SRGLGC
Trigger: GCATCCAAGGCCTCTACTTCACAGAGACTCAAAGGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGAGCCATCCTGGCATTaGTTTGAATGTCCGTTGCAA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSEPSWH*FECPLQ
Trigger: TTGCAACGGACATTCAAATCAATGCCAGGATGGCTC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCATCTATTTTTGATCCATaGTTTGAAATGGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLASIFDP*FEMAER
Trigger: CCGTTCTGCCATTTCAAATCATGGATCAAAAATAGA...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCTGGAAAAGTCACCTaGAGGCACGTTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSGKVT*RHVVSL
Trigger: GAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCTGGAAAAGTCACCTaGAGGCACGTTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESGKVT*RHVVSL
Trigger: GAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCAGCTTCTGCTTCTCTaGGGTGCTTTCCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSQLLLL*GAFQSS
Trigger: GGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCTCTCTGTATCCCATaGAGACCATCTCGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPLCIP*RPSRRV
Trigger: AACTCTCCGAGATGGTCTTCATGGGATACAGAGAGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTGTCGTTGGCCTTTCTaGCCATGCTCTTTGCACTAC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDCRWPF*PCSLHY
Trigger: GTAGTGCAAAGAGCATGGTCAGAAAGGCCAACGACA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTGTCTGGATGGGGTTaGGCCCATCCAGAACCTCAT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLSGWG*AHPEPH
Trigger: ATGAGGTTCTGGATGGGCTCAACCCCATCCAGACAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGTTGTAGACACAGGTaGGCTGGCCATCCACAACTG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGCRHR*AGHPQL
Trigger: CAGTTGTGGATGGCCAGCTCACCTGTGTCTACAACC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGGTCTGAAATCCAAATaGGGCCTGGAGGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFGLKSK*GLEVVS
Trigger: ACTGACCACCTCCAGGCCTCATTTGGATTTCAGACC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAAGCTGGTCATCGATaGGAAGCCGTAGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPEAGHR*EAVVQS
Trigger: ACTCTGGACTACGGCTTCTCATCGATGACCAGCTTC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGTCTTGGGAAGTGGTaGGCAAGCATCTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGLGKW*ASILPH
Trigger: GTGTGGCAAGATGCTTGCTCACCACTTCCCAAGACC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGCTCCTGAGGAAGCTTaGATAGCAAGTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCAPEEA*IASGWW
Trigger: CCACCAGCCACTTGCTATTCAAGCTTCCTCAGGAGC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTCCACAGCAAACTGTaGCCTGGGTTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVHSKL*PGFQQL
Trigger: GAGCTGCTGAAACCCAGGTCACAGTTTGCTGTGGAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAGACACCCCGAAGCTTaGAGAAGGGGTATACAAGGG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPRHPEA*RRGIQG
Trigger: CCCTTGTATACCCCTTCTTCAAGCTTCGGGGTGTCT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGACAACCATTCAGACTaGCAGGCCCCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLDNHSD*QAPGLP
Trigger: TGGAAGTCCAGGGGCCTGTCAGTCTGAATGGTTGTC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGTTTGTGTCCTGAGTaGAGAATGATCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGLCPE*RMISSW
Trigger: CCAGCTCGAGATCATTCTTCACTCAGGACACAAACC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGTTTGTGTCCTGAGTaGAGAATGATCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGLCPE*RMISSW
Trigger: CCAGCTCGAGATCATTCTTCACTCAGGACACAAACC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp TACTGCAGTGCTCCATCTGCTGTTTCAAGGAACTCTGACTTCCAGTCCCATTTAAAACACCCCTTGTGCTaGTTCTTTAATTACAGCATG +
Preference number: 4 (lower is better)
Translates to: YCSAPSAVSRNSDFQSHLKHPLC*FFNYSM
Trigger: CATGCTGTAATTAAAGAATCAGCACAAGGGGTGTTT...TAAATGGGACTGGAAGTCAGAGTTCCTTGAAACAGCAGATGGAGCACTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR TCA 90 bp GTAGTAGTAATACAATGTTCAAGGCCATGGCCAAGAACTGGATGGGTTTACTGCTGTTTCAAGGAACTCTaGCTTCCAGTCCCATTTAGT +
Preference number: 4 (lower is better)
Translates to: VVVIQCSRPWPRTGWVYCCFKEL*LPVPFS
Trigger: ACTAAATGGGACTGGAAGTCAGAGTTCCTTGAAACA...GCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTACTACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGTATTCAAGCTTGCCTaGTGCCGCTCAACATCTGGA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSVFKLA*CRSTSG
Trigger: TCCAGATGTTGAGCGGCAGCAGGCAAGCTTGAATAC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTACCTTTCCCACGACATaGTCTCGGCACTGGCACACT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCTFPTT*SRHWHT
Trigger: AGTGTGCCAGTGCCGAGAGCATGTCGTGGGAAAGGT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGTGAGGGAAAGGCCTaGCACTTAGAACATCCAAAA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGEGKA*HLEHPK
Trigger: TTTTGGATGTTCTAAGTGGCAGGCCTTTCCCTCACC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCACTTGATTCTGCGGTaGCTTCAAGGTGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCHLILR*LQGDPR
Trigger: CCTGGGGTCACCTTGAAGGCACCGCAGAATCAAGTG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGCTGTCTCCAGGTaGCAGCCCAGCATATCCACA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSAVSR*QPSIST
Trigger: TGTGGATATGCTGGGCTGGCACCTGGAGACAGCAGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGATTTCCACAGCAAGTaGTATGCGCCCACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSDFHSK*YAPTSC
Trigger: ACAGGAAGTGGGCGCATAGCACTTGCTGTGGAAATC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCCGAAATATCCCGGTaGACACCTTTCACACTGTGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPEISR*TPFTLC
Trigger: ACACAGTGTGAAAGGTGTGCACCGGGATATTTCGGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACATTGCTGTTACAACTaGATGGTTGGCAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSHCCYN*MVGSYL
Trigger: GAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCGGTTCAGCAAGAGCTaGGACTCCCTTTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPERFSKS*DSLLSA
Trigger: AGCTGATAAAAGGGAGTCGCAGCTCTTGCTGAACCG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCCCTGGTGGGTTTTCTaGCAGGTCCTTATCCGGTTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLPWWVF*QVLIRF
Trigger: GAACCGGATAAGGACCTGGCAGAAAACCCACCAGGG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACTTTTCTCCATCAGCTaGAGCGCAATGTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSLFSIS*SAMLVC
Trigger: GCAAACCAACATTGCGCTGCAGCTGATGGAGAAAAG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCGATCCCCGTTTTCTaGAAAGAACAGCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEAIPVF*KEQQAS
Trigger: AGAGGCTTGCTGTTCTTTGCAGAAAACGGGGATCGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATCTTCCAGAGTGACCTaGAGGTTCCTTGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESSRVT*RFLVHV
Trigger: GACATGGACAAGGAACCTGCAGGTCACTCTGGAAGA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGATCTTCCAGAGTGACCTaGAGGTTCCTTGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRSSRVT*RFLVHV
Trigger: GACATGGACAAGGAACCTGCAGGTCACTCTGGAAGA...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCCCCAGACGCAGAGACTaGCGGGAACTTGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFPRRRD*RELEMC
Trigger: ACACATTTCAAGTTCCCGGCAGTCTCTGCGTCTGGG...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCCACTGGTGTGTCCTaGAACAGCTGGTTGATACGA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPATGVS*NSWLIR
Trigger: TCGTATCAACCAGCTGTTGCAGGACACACCAGTGGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCAAACACCACCGTGTaGCATTTCCCATCATTGCAT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPNTTV*HFPSLH
Trigger: ATGCAATGATGGGAAATGGCACACGGTGGTGTTTGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCATCACACAGAGACTaGTTTGGTGTGACCGACGTT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPSHRD*FGVTDV
Trigger: AACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCATCACACAGAGACTaGTTTGGTGTGACCGACGTT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPSHRD*FGVTDV
Trigger: AACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp AGATGTCCATTGCTTCAGGTCATCTTGGGTTTGACAAAAAGCAACATGAAAGTAGTTCTGAAGGTGTGTTaGAAAGGTAGGTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: RCPLLQVILGLTKSNMKVVLKVC*KGRCAP
Trigger: GGGTGCACACCTACCTTTGCAACACACCTTCAGAAC...TACTTTCATGTTGCTTTTTGTCAAACCCAAGATGACCTGAAGCAATGGACATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR GCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACATCCCTCACTGTAGTTaGAATAGTGAACACACACAA +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYIPHCS*NSEHTQ
Trigger: TTGTGTGTGTTCACTATTGCAACTACAGTGAGGGAT...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCACAGGTGTGGTGCTaGCATTCACACCGAAACAGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPQVWC*HSHRNS
Trigger: ACTGTTTCGGTGTGAATGCCAGCACCACACCTGTGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGACAGTGACAAAGGCTaGCTCCTTACTCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPDSDKG*LLTRQE
Trigger: TTCCTGCCGAGTAAGGAGCCAGCCTTTGTCACTGTC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGCTGAGCTGCCTCCGTaGAATACTCGACCACAACCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLAELPP*NTRPQP
Trigger: TGGTTGTGGTCGAGTATTCCACGGAGGCAGCTCAGC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTTGGCTGGGTCCAAATaGAATGAGCCTTCTCGACAC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLAGSK*NEPSRH
Trigger: GTGTCGAGAAGGCTCATTCCATTTGGACCCAGCCAA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACATACTGTTGCTGCCTaGGTTGAAAGAGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSHTVAA*VERDRD
Trigger: ATCCCTGTCTCTTTCAACCCAGGCAGCAACAGTATG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCTGTTACAACTGCATaGTTGGCAGCTACCTCCGAA +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDAVTTA*LAATSE
Trigger: TTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTTCAGCCCACTCTCTaGAAAAGTCACCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELQPTL*KSHLKA
Trigger: TGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCCATTGTTCTCCCCCTaGTGGGTTTTCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLPLFSP*WVFCQV
Trigger: GACCTGGCAGAAAACCCACCAGGGGGAGAACAATGG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGCTCTCTCGTTTTCTTaGTTCAAGCCATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSALSFS*FKPFAC
Trigger: GCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCAGATTCAGATGCACTaGCAGCCCTGTTGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLQIQMH*QPCWLR
Trigger: ACGCAGCCAACAGGGCTGCCAGTGCATCTGAATCTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTTTCCACATCTGTCTaGATGGGGTTGAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLSTSV*MGLSPS
Trigger: GGATGGGCTCAACCCCATCCAGACAGATGTGGAAAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATACTGGCAGCATCTCTaGCCTGCTGAATTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSYWQHL*PAELVL
Trigger: GAGAACTAATTCAGCAGGCCAGAGATGCTGCCAGTA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGACAGCAACCTTACTaGCAGCATCTCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGQQPY*QHLWPA
Trigger: AGCAGGCCAGAGATGCTGCCAGTAAGGTTGCTGTCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCATCTTCCAGGTCATTTaGCAGTCGGACTTCGACTCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSIFQVI*QSDFDS
Trigger: GGAGTCGAAGTCCGACTGCCAAATGACCTGGAAGAT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATATCTTCCAGGTCATTTaGCAGTCGGACTTCGACTCC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDIFQVI*QSDFDS
Trigger: GGAGTCGAAGTCCGACTGCCAAATGACCTGGAAGAT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTCTTGGTCAAGATCTaGTCCACTTGGAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLLVKI*STWSSA
Trigger: GGCTGAACTCCAAGTGGACCAGATCTTGACCAAGAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAGCATGTGGTTGAGTTaGAACTCGAGCATAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESMWLS*NSSIAR
Trigger: ACGGGCTATGCTCGAGTTCCAACTCAACCACATGCT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCATGTGGTTGAGTTaGAACTCGAGCATAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSMWLS*NSSIAR
Trigger: ACGGGCTATGCTCGAGTTCCAACTCAACCACATGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTCCAAAGGTTGGGATaGGAGCATGTGGTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVQRLG*EHVVEL
Trigger: CAACTCAACCACATGCTCCCATCCCAACCTTTGGAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATGTCTGTCCAAAGGTTaGGATGGGAGCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSECLSKG*DGSMWL
Trigger: CAACCACATGCTCCCATCCCAACCTTTGGACAGACA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTCTGCCGTTGTTTATaGCGTCTCCAACTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLCRCL*RLQLLS
Trigger: AGAGAGGAGTTGGAGACGCCATAAACAACGGCAGAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAAATCCAAATGAGGCCTaGAGGTGGTCAGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRNPNEA*RWSVGG
Trigger: ACCACCTACTGACCACCTCCAGGCCTCATTTGGATT...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCACTAATAATATGCCACTaGGTTGAAAGGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLALIICH*VERSEI
Trigger: GATTTCAGACCTTTCAACCCAGTGGCATATTATTAG...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGGAGATTTAAAAATTaGGCCGCCGCTATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSWRFKN*AAAIAG
Trigger: ACCAGCGATAGCGGCGGCCCAATTTTTAAATCTCCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTATCCATATACGTCTGTaGAGATTTAAAAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: CVTSISASLPGSLCPQGIIHIRL*RFKNWA
Trigger: GGCCCAATTTTTAAATCTCCACAGACGTATATGGAT...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATATAGCAAGTGGCTGGTaGGAATGTCCCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDIASGW*ECPQTG
Trigger: TCCAGTTTGGGGACATTCCCACCAGCCACTTGCTAT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCTTGAATAGCAAGTaGCTGGTGGGAATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSLNSK*LVGMSP
Trigger: TGGGGACATTCCCACCAGCCACTTGCTATTCAAGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACCACAAAGCTGTTTGTaGGGAGGCTCTTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEPQSCL*GGSLVS
Trigger: GGAAACCAAAGAGCCTCCCCACAAACAGCTTTGTGG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCCAGTGAGACTTCTTaGGCGGATGCTGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPSETS*ADAENK
Trigger: CTTGTTTTCAGCATCCGCCCAAGAAGTCTCACTGGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCAGTGTCGTCAAATTaGCTGGAGCACCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESVSSN*LEHLQG
Trigger: ACCTTGGAGGTGCTCCAGCCAATTTGACGACACTGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAGAATGATCTCGAGCTaGGGAGGGAGGTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLRMISS*GGRCIG
Trigger: CCCAATGCACCTCCCTCCCCAGCTCGAGATCATTCT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGACTGTGTTTCCAAGACTaGTCTCGAACTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRLCFQD*SRTLGL
Trigger: GAGGCCAAGAGTTCGAGACCAGTCTTGGAAACACAG...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACGGATTGGGAAACCAATaGGCTTCATTAATTAATGGG +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYGLGNQ*ASLING
Trigger: CCCATTAATTAATGAAGCCCATTGGTTTCCCAATCC...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTGGTTGGTAGCAGGCTaGGGAAGGCTAGGATTGGGA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCWLVAG*GRLGLG
Trigger: TCCCAATCCTAGCCTTCCCCAGCCTGCTACCAACCA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCATCGATGGCATTGGTaGCAGGATGTGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCHRWHW*QDVLSW
Trigger: CCAGGAAAGCACATCCTGTCACCAATGCCATCGATG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGATGTGTCCCTTGAGCTaGATGTCTGCATCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEMCPLS*MSASAN
Trigger: ATTGGCAGATGCAGACATTCAGCTCAAGGGACACAT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATGGGTCCAAATGGAATaGGCCTTCTCGACACACATT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEWVQME*AFSTHI
Trigger: AATGTGTGTCGAGAAGGCTCATTCCATTTGGACCCA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAGCCATCCTGGCATTaGTTTGAATGTCCGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDEPSWH*FECPLQ
Trigger: TTGCAACGGACATTCAAATCAATGCCAGGATGGCTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGAGCACGAAGGTCACTaGGTTTGGCTTCGTATTCAT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSEHEGH*VWLRIH
Trigger: ATGAATACGAAGCCAAACTCAGTGACCTTCGTGCTC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTTTCACTTGTCTCTaGATGGCTCCCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSFTCL*MAPKAL
Trigger: GAGAGCTTTGGGAGCCATTCAGAGACAAGTGAAAGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCAACAGCTGTTGGTTaGTACTTTCAATCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSATAVG*YFQSCA
Trigger: GGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCAACAGCTGTTGGTTaGTACTTTCAATCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEATAVG*YFQSCA
Trigger: GGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCATCTCTGGCCTGCTaGATTAGTTCTCGTATTCTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDASLAC*ISSRIL
Trigger: CAGAATACGAGAACTAATTCAGCAGGCCAGAGATGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCATCTCTGGCCTGCTaGATTAGTTCTCGTATTCTG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEASLAC*ISSRIL
Trigger: CAGAATACGAGAACTAATTCAGCAGGCCAGAGATGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAACCCCCATTTTCTCTTaGGTTGGGCCTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSETPIFS*VGPLEK
Trigger: TTTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTATCCACGGTGGTCTaGATTGTCTGTCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLSTVV*IVCPKV
Trigger: AACCTTTGGACAGACAATTCAGACCACCGTGGATAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGTCTGAAATCCAAATaGGGCCTGGAGGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGLKSK*GLEVVS
Trigger: ACTGACCACCTCCAGGCCTCATTTGGATTTCAGACC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCTGCAACAGCTGGTTaGTACGAAAAGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPATAG*YEKSWS
Trigger: AGACCAAGACTTTTCGTATCAACCAGCTGTTGCAGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTTCTTAGTGCCCGTGTaGAACACCAGTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLFLVPV*NTSPLE
Trigger: CTCCAGAGGACTGGTGTTTCACACGGGCACTAAGAA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGTTTTGAATCCAGCTaGAAGTTCTTCAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGFESS*KFFRHP
Trigger: GGGATGCCTGAAGAACTTTCAGCTGGATTCAAAACC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGGTTTTGAATCCAGCTaGAAGTTCTTCAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDGFESS*KFFRHP
Trigger: GGGATGCCTGAAGAACTTTCAGCTGGATTCAAAACC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGTTTTGAATCCAGCTaGAAGTTCTTCAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGFESS*KFFRHP
Trigger: GGGATGCCTGAAGAACTTTCAGCTGGATTCAAAACC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTATTAGGATCCCAGTaGGACTTCTTGGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVLGSQ*DFLGGC
Trigger: GCATCCGCCCAAGAAGTCTCACTGGGATCCTAATAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAAGTGCTTCCCGGGCTaGCTTCCGATGTGTATTAGG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLKCFPG*LPMCIR
Trigger: CCTAATACACATCGGAAGTCAGCCCGGGAAGCACTT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTCTGGTTTGTGTCCTaGGTGAAGAATGATCTCGAG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVWFVS*VKNDLE
Trigger: CTCGAGATCATTCTTCACTCAGGACACAAACCAGAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTCTGGTTTGTGTCCTaGGTGAAGAATGATCTCGAG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVWFVS*VKNDLE
Trigger: CTCGAGATCATTCTTCACTCAGGACACAAACCAGAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATATTGGTGACAGGATGTaGTTTCCTGGGGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDIGDRM*FPGVFR
Trigger: TCTGAAGACCCCAGGAAAGCACATCCTGTCACCAAT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCCATGGTGAGTAGGTaGTTCCAAAGTCTACAGATC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEAMVSR*FQSLQI
Trigger: GATCTGTAGACTTTGGAAGCACCTACTCACCATGGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCATTGCAAACACACTaGCCACCAATGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPLQTH*PPMLMS
Trigger: GGACATCAGCATTGGTGGGCAGTGTGTTTGCAATGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTGGGTATTCAAGCTTaGCTGCTGCCGCTCAACATC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLGIQA*LLPLNI
Trigger: GATGTTGAGCGGCAGCAGGCAAGCTTGAATACCCAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTCCACCAGCATAGATaGCCTGGGTATTCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLHQHR*PGYSSL
Trigger: CAAGCTTGAATACCCAGGGCATCTATGCTGGTGGAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCACAAACAGCTGAGCTaGCTCCGTGGAATACTCGAC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLHKQLS*LRGILD
Trigger: GTCGAGTATTCCACGGAGGCAGCTCAGCTGTTTGTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCTCATACATGGCGATaGGGCTCATGTGATCAATCA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEAHTWR*GSCDQS
Trigger: TGATTGATCACATGAGCCGCATCGCCATGTATGAGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCCCATAACTGGCAATaGAGTGGACTTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPAHNWQ*SGLVVS
Trigger: TGAGACCACAAGTCCACTGCATTGCCAGTTATGGGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGTGAGGGAAAGGCCTaGCACTTAGAACATCCAAAA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGEGKA*HLEHPK
Trigger: TTTTGGATGTTCTAAGTGGCAGGCCTTTCCCTCACC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATAAACGTCGGGTGCGCTaGTTGGTAAAAATGGATGAC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDKRRVR*LVKMDD
Trigger: GTCATCCATTTTTACCAAGCAGCGCACCCGACGTTT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACATCTCTGTTGCAATTaGAGGGAACACACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSHLCCN*REHTQE
Trigger: TTCCTGAGTGTGTTCCCTGCAATTGCAACAGAGATG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTTCTACATTTTCCTTaGAGAGGCAAGCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLLHFP*RGKPRS
Trigger: GGACCGGGGCTTGCCTCTGCAAGGAAAATGTAGAAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTTGGATGCGCACATCTaGCAGTCTAGACAGCACTGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLDAHI*QSRQHC
Trigger: ACAGTGCTGTCTAGACTGGCAGATGTGCGCATCCAA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTTTGGATGCGCACATCTaGCAGTCTAGACAGCACTGT +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCLDAHI*QSRQHC
Trigger: ACAGTGCTGTCTAGACTGGCAGATGTGCGCATCCAA...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAATGTCCGTTGCAATTaGAGGGAACACACCGTCCGG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLNVRCN*REHTVR
Trigger: CCGGACGGTGTGTTCCCTGCAATTGCAACGGACATT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCATTGCTGTTACAACTaGATGGTTGGCAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSHCCYN*MVGSYL
Trigger: GAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTGCCCAGCTGGCCATTaGTGTTACAACTGCATGGTT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPCPAGH*CYNCMV
Trigger: AACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTTTTCTCCATCAGCTaGAGCGCAATGTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELFSIS*SAMLVC
Trigger: GCAAACCAACATTGCGCTGCAGCTGATGGAGAAAAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTTTTCTCCATCAGCTaGAGCGCAATGTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLFSIS*SAMLVC
Trigger: GCAAACCAACATTGCGCTGCAGCTGATGGAGAAAAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCACCCGATCCATAACTaGCTCCTTAGTCTCACTCTT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDHPIHN*LLSLTL
Trigger: AAGAGTGAGACTAAGGAGGCAGTTATGGATCGGGTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAATCGAATGGTCTCTaGCGTTGTTTATGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDESNGL*RCLWRL
Trigger: GAGACGCCATAAACAACGGCAGAGACCATTCGATTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCGCCGCTATCGCTGGTaGTCAATTCAATGTAACCAT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRRYRW*SIQCNH
Trigger: ATGGTTACATTGAATTGAGCACCAGCGATAGCGGCG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGACGCCGCTATCGCTGGTaGTCAATTCAATGTAACCAT +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRRRYRW*SIQCNH
Trigger: ATGGTTACATTGAATTGAGCACCAGCGATAGCGGCG...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCAGACGCAGAGACTaGCGGGAACTTGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPRRRD*RELEMC
Trigger: ACACATTTCAAGTTCCCGGCAGTCTCTGCGTCTGGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTACAACCCTCAAAATTaGTCCCGCCCAGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLYNPQN*SRPDAE
Trigger: CTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGTGGTTTGTTTAAACTaGAGCCTCCCAGGGACACAT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDVVCLN*SLPGTH
Trigger: ATGTGTCCCTGGGAGGCTGCAGTTTAAACAAACCAC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGTGAGCAAGCATCTTaGCACACCTTCACGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGEQAS*HTFTLL
Trigger: AAGGAGCGTGAAGGTGTGGCAAGATGCTTGCTCACC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTGGAGGATGTTGTCTaGATGTCCACAGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLEDVV*MSTANC
Trigger: ACAGTTTGCTGTGGACATGCAGACAACATCCTCCAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTGGAGGATGTTGTCTaGATGTCCACAGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELEDVV*MSTANC
Trigger: ACAGTTTGCTGTGGACATGCAGACAACATCCTCCAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCAAACACCACCGTGTaGCATTTCCCATCATTGCAT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPNTTV*HFPSLH
Trigger: ATGCAATGATGGGAAATGGCACACGGTGGTGTTTGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCAAACACCACCGTGTaGCATTTCCCATCATTGCAT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPNTTV*HFPSLH
Trigger: ATGCAATGATGGGAAATGGCACACGGTGGTGTTTGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATGAAAGTAGTAGTAATACAATGTTCAAGGCCATGGCCAAGAACTGGATGGGTTCATCGCACCTGTAGTTaGAGCTGTAAATGTTCACCT +
Preference number: 4 (lower is better)
Translates to: MKVVVIQCSRPWPRTGWVHRTCS*SCKCSP
Trigger: AGGTGAACATTTACAGCTGCAACTACAGGTGCGATG...AACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTACTACTACTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR GCA 90 bp TTTTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGGGTTTGACAAAAATGGGTTTACTGCAGTaGTCCATCTGCTGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: FSQQGRCPLLQVILGLTKMGLLQ*SICCFK
Trigger: CTTGAAACAGCAGATGGAGCACTGCAGTAAACCCAT...TTTTGTCAAACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR GCA 90 bp ATGTCCATTGCTTCAGGTCATCTTGGGTTTGACAAAAAGCAACATGAAAGTAGTACTGGATGGGTTTACTaGAGTGCTCCATCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: MSIASGHLGFDKKQHESSTGWVY*SAPSAV
Trigger: AACAGCAGATGGAGCACTGCAGTAAACCCATCCAGT...ACTACTTTCATGTTGCTTTTTGTCAAACCCAAGATGACCTGAAGCAATGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCATAGTAACAGTTGCTaGCATGGCCGTGGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLHSNSC*HGRGSC
Trigger: GCAACTGCCACGGCCATGCCAGCAACTGTTACTATG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACTGCCGCTCAACATCTaGATCATAGTAACAGTTGCT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSLPLNI*IIVTVA
Trigger: AGCAACTGTTACTATGATCCAGATGTTGAGCGGCAG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGCAGCACCCCAGGATaGATAAATAGTTATATGGCC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSSTPG*INSYMA
Trigger: GGCCATATAACTATTTATCCATCCTGGGGTGCTGCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGGTACAGGGGAATCTaGTCACTGGCAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGYRGI*SLANAG
Trigger: ACCAGCATTTGCCAGTGACCAGATTCCCCTGTACCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCAATAGCTCATACATaGCGATGCGGCTCATGTGAT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPIAHT*RCGSCD
Trigger: ATCACATGAGCCGCATCGCCATGTATGAGCTATTGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACAAATCGCCCATAACTaGCAATGCAGTGGACTTGTG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEQIAHN*QCSGLV
Trigger: CACAAGTCCACTGCATTGCCAGTTATGGGCGATTTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCAAATCGCCCATAACTaGCAATGCAGTGGACTTGTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDQIAHN*QCSGLV
Trigger: CACAAGTCCACTGCATTGCCAGTTATGGGCGATTTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTCAAGGACTTTCCTTCTaGAACCTTCACAGTTGCGGC +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCQGLSF*NLHSCG
Trigger: GCCGCAACTGTGAAGGTTCCAGAAGGAAAGTCCTTG...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTACCTCCGAATTTCTaGGGATTCCCGAAATATCCC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLPPNF*GFPKYP
Trigger: GGGATATTTCGGGAATCCCCAGAAATTCGGAGGTAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCTGTTACAACTGCATaGTTGGCAGCTACCTCCGAA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPAVTTA*LAATSE
Trigger: TTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTTCAGCCCACTCTCTaGAAAAGTCACCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLQPTL*KSHLKA
Trigger: TGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCTCTCTCGTTTTCTTaGTTCAAGCCATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEALSFS*FKPFAC
Trigger: GCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCACTTGTCTCTGAATaGCTCCCAAAGCTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSLVSE*LPKLSR
Trigger: ACGAGAGAGCTTTGGGAGCCATTCAGAGACAAGTGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCACTTGTCTCTGAATaGCTCCCAAAGCTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSLVSE*LPKLSR
Trigger: ACGAGAGAGCTTTGGGAGCCATTCAGAGACAAGTGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGCTGCAGCGCAATGTTaGTTTGCAACAAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSAAAQC*FATKMS
Trigger: ACTCATCTTTGTTGCAAACCAACATTGCGCTGCAGC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCCTTTATCACTGTCTaGAGGGCAGATTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSFITV*RADSDA
Trigger: TGCATCTGAATCTGCCCTCCAGACAGTGATAAAGGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTACTGGCAGCATCTCTaGCCTGCTGAATTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSYWQHL*PAELVL
Trigger: GAGAACTAATTCAGCAGGCCAGAGATGCTGCCAGTA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACTTGAGTTGGGCCTTTaGAGAAACAAGGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSLELGL*RNKDRD
Trigger: ATCTCTGTCCTTGTTTCTCCAAAGGCCCAACTCAAG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGACTCCGGGTGTTTCTaGTTTACTGGATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLDSGCF*FTGCGS
Trigger: GGAGCCACATCCAGTAAACCAGAAACACCCGGAGTC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTGGGATGGGAGCATGTaGTTGAGTTGGAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLWDGSM*LSWNSS
Trigger: GCTCGAGTTCCAACTCAACCACATGCTCCCATCCCA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCCTCTATCCACGGTaGTCTGAATTGTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSLYPR*SELSVQ
Trigger: TTGGACAGACAATTCAGACCACCGTGGATAGAGGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCAATTGTCCTCCTCTaGAGAATGAGGCAGATCGCA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESIVLL*RMRQIA
Trigger: TGCGATCTGCCTCATTCTCCAGAGGAGGACAATTGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGATCAATTGTCCTCCTCTaGAGAATGAGGCAGATCGCA +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRSIVLL*RMRQIA
Trigger: TGCGATCTGCCTCATTCTCCAGAGGAGGACAATTGA...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAATCCAAATGAGGCCTaGAGGTGGTCAGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPNPNEA*RWSVGG
Trigger: ACCACCTACTGACCACCTCCAGGCCTCATTTGGATT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCAATCCAAATGAGGCCTaGAGGTGGTCAGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFNPNEA*RWSVGG
Trigger: ACCACCTACTGACCACCTCCAGGCCTCATTTGGATT...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGATGGAGATTTAAAAATTaGGCCGCCGCTATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRWRFKN*AAAIAG
Trigger: ACCAGCGATAGCGGCGGCCCAATTTTTAAATCTCCA...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGATTGGCCTGGGTCTTaGGAAGTGGTGAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLDWPGS*EVVSKH
Trigger: ATGCTTGCTCACCACTTCCCAAGACCCAGGCCAATC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCAGCAAACTGTGACCTaGGTTTCAGCAGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLQQTVT*VSAAPE
Trigger: CTCAGGAGCTGCTGAAACCCAGGTCACAGTTTGCTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAAACACCAGTCCTCTaGAGGATGTTGTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDETPVL*RMLSAC
Trigger: ACATGCAGACAACATCCTCCAGAGGACTGGTGTTTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGAAACACCAGTCCTCTaGAGGATGTTGTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEETPVL*RMLSAC
Trigger: ACATGCAGACAACATCCTCCAGAGGACTGGTGTTTC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCACAAAGCTGTTTGTaGGGAGGCTCTTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPQSCL*GGSLVS
Trigger: GGAAACCAAAGAGCCTCCCCACAAACAGCTTTGTGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCCAGTGAGACTTCTTaGGCGGATGCTGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPSETS*ADAENK
Trigger: CTTGTTTTCAGCATCCGCCCAAGAAGTCTCACTGGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCAGTGTCGTCAAATTaGCTGGAGCACCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSVSSN*LEHLQG
Trigger: ACCTTGGAGGTGCTCCAGCCAATTTGACGACACTGA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAAGTGATGGGTATCCATaGTCAGAATTCAAAATTAGA +
Preference number: 4 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLASDGYP*SEFKIR
Trigger: TCTAATTTTGAATTCTGACCATGGATACCCATCACT...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp TTATTTGTTTTCATTTTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGCCATGGCCAAGAACTaGATGGGTTTACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LFVFIFTTGKMSIASGHLAMAKN*MGLLQC
Trigger: GCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGC...AAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAAAATGAAAACAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAAATATTGCCATGGTaGGTAGGTGCTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSKILPW*VGASKV
Trigger: GACTTTGGAAGCACCTACTCACCATGGCAATATTTT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAACTGCCCACCAATGCTaGTGTCCTTTATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSETAHQC*CPLCCN
Trigger: ATTACAGCATAAAGGACATCAGCATTGGTGGGCAGT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCTACTGGATCTTCTaGACTTGGTGTAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSYWIF*TWCRNR
Trigger: CCTGTTTCTACACCAAGTTCAGAAGATCCAGTAGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTATGATCTCTTTGCTTTaGGCAGCACCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCMISLL*AAPQDG
Trigger: TCCATCCTGGGGTGCTGCTCAAAGCAAAGAGATCAT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCCATATTCCTGGTGTaGTTGAAAATGGGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPIFLV*LKMGLQ
Trigger: TTGCAGACCCATTTTCAATCACACCAGGAATATGGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTAGGTGGCACTTTGATTaGCAAATCGCCCATAACTGG +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCRWHFD*QIAHNW
Trigger: CCAGTTATGGGCGATTTGTCAATCAAAGTGCCACCT...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTTGGTAAAAATGGATaGCAAAGACGTATCGGCCCA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELGKNG*QRRIGP
Trigger: TGGGCCGATACGTCTTTGTCATCCATTTTTACCAAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATACTTGGCTTGGTAAGTaGGGTAACCACCATATGAAG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDTWLGK*GNHHMK
Trigger: CTTCATATGGTGGTTACCTCACTTACCAAGCCAAGT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTGGCAGAACGGTAGTTaGGCAACTGATTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLWQNGS*ATDSSG
Trigger: ACCTGAGGAATCAGTTGCTCAACTACCGTTCTGCCA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCTTTCACTTGTCTCTaGATGGCTCCCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSFTCL*MAPKAL
Trigger: GAGAGCTTTGGGAGCCATTCAGAGACAAGTGAAAGA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACATCTCGGAGAGTTGTaGGATTGGTGTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHLGEL*DWCLSL
Trigger: AAGTGATAGACACCAATCTCACAACTCTCCGAGATG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR TCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGCAACAGCTGTTGGTTaGTACTTTCAATCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFATAVG*YFQSCA
Trigger: GGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTCCAGATTTACCATTaGACCTCATGGGGACAGCAA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLQIYH*TSWGQQ
Trigger: TTGCTGTCCCCATGAGGTTCAATGGTAAATCTGGAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTACCCCCATTTTCTCTTaGGTTGGGCCTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPTPIFS*VGPLEK
Trigger: TTTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTACCCCCATTTTCTCTTaGGTTGGGCCTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCTPIFS*VGPLEK
Trigger: TTTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGT...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGGACACATCTCTCTTaGGAGAGTTACTGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGTHLS*ESYWSN
Trigger: ATTTGACCAGTAACTCTCTCAAGAGAGATGTGTCCC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGGGACACATCTCTCTTaGGAGAGTTACTGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDGTHLS*ESYWSN
Trigger: ATTTGACCAGTAACTCTCTCAAGAGAGATGTGTCCC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGACAGGGATGTGATTaGCATGAATATTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGQGCD*HEYSSD
Trigger: GTCTGAGGAATATTCATGTCAATCACATCCCTGTCC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTCTGGTTTGTGTCCTaGGTGAAGAATGATCTCGAG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPVWFVS*VKNDLE
Trigger: CTCGAGATCATTCTTCACTCAGGACACAAACCAGAC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR TCA 90 bp TTGTTTTCATTTTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGGGTAATTATCCCCAGTTCTaGAGGTGTGTTGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: LFSFSQQGRCPLLQVILGNYPQF*RCVAKV
Trigger: TACCTTTGCAACACACCTTCAGAACTGGGGATAATT...ACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAAAATGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACATATGAAGCTTCAGTaGTGGTGCGTTACATCCATC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHMKLQ*WCVTSI
Trigger: GATGGATGTAACGCACCATCACTGAAGCTTCATATG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATAAGAGAACATTGGGTTaGAGGGGATGTGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDKRTLG*RGCDSV
Trigger: AACTGAGTCACATCCCCTTCAACCCAATGTTCTCTT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTTCAGCATGGCCATTaGAAACACACTGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLQHGH*KHTAHQ
Trigger: TTGGTGGGCAGTGTGTTTGCAATGGCCATGCTGAAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTTCAAGCTTGCCTGCTaGCGCTCAACATCTGGATCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLFKLAC*RSTSGS
Trigger: TGATCCAGATGTTGAGCGGCAGCAGGCAAGCTTGAA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCAGAAGGACTCCTTCTaGCTTAATACAAGCAACCCA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSQKDSF*LNTSNP
Trigger: TGGGTTGCTTGTATTAAGGCAGAAGGAGTCCTTCTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGATTTCCACAGCAAGTaGTATGCGCCCACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCDFHSK*YAPTSC
Trigger: ACAGGAAGTGGGCGCATAGCACTTGCTGTGGAAATC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCCCGAAATATCCCGGTaGACACCTTTCACACTGTGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLPEISR*TPFTLC
Trigger: ACACAGTGTGAAAGGTGTGCACCGGGATATTTCGGG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCACATCCAGTTCTTTTaGGCTTTGTGTTGCCCGATT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSHIQFF*ALCCPI
Trigger: AATCGGGCAACACAAAGCGCAAAAGAACTGGATGTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCTGCTTCTCTGAGGTaGTTTCCAAAGTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESASLR*FPKFLF
Trigger: GAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCCACAAGGGATGTTTTaGCAGCAGATCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDPQGMF*QQIWKV
Trigger: AACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCACAAGGGATGTTTTaGCAGCAGATCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPQGMF*QQIWKV
Trigger: AACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGCTGGACTGACTTCTTaGTTTAGCTTCTTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSAGLTS*FSFFCV
Trigger: GACACAAAAGAAGCTAAAGCAAGAAGTCAGTCCAGC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGCGATCCCCGTTTTCTaGAAAGAACAGCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLAIPVF*KEQQAS
Trigger: AGAGGCTTGCTGTTCTTTGCAGAAAACGGGGATCGC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAATCGAATGGTCTCTaGCGTTGTTTATGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPESNGL*RCLWRL
Trigger: GAGACGCCATAAACAACGGCAGAGACCATTCGATTC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCTTCAAATTTTTCATaGAGCCTCGGAAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSSNFS*SLGKQA
Trigger: CGCCTGCTTTCCGAGGCTGCATGAAAAATTTGAAGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTTCCAGAGTGACCTaGAGGTTCCTTGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSSRVT*RFLVHV
Trigger: GACATGGACAAGGAACCTGCAGGTCACTCTGGAAGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCTTCCAGAGTGACCTaGAGGTTCCTTGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSSRVT*RFLVHV
Trigger: GACATGGACAAGGAACCTGCAGGTCACTCTGGAAGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCCGCCGCTATCGCTGGTaGTCAATTCAATGTAACCAT +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFRRYRW*SIQCNH
Trigger: ATGGTTACATTGAATTGAGCACCAGCGATAGCGGCG...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTGGTTTGTTTAAACTaGAGCCTCCCAGGGACACAT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPVVCLN*SLPGTH
Trigger: ATGTGTCCCTGGGAGGCTGCAGTTTAAACAAACCAC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCATCACACAGAGACTaGTTTGGTGTGACCGACGTT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPSHRD*FGVTDV
Trigger: AACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTTGTTTTATGGTGACTaGCACCGAGTGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLFYGD*HRVPLS
Trigger: GGACAGTGGCACTCGGTGGCAGTCACCATAAAACAA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTTGTTTTATGGTGACTaGCACCGAGTGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLFYGD*HRVPLS
Trigger: GGACAGTGGCACTCGGTGGCAGTCACCATAAAACAA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTTTTCATTTTCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTTGGGTTTTTTTTCCTTGTGCTATaGACCCAGGTACTTGACACA +
Preference number: 4 (lower is better)
Translates to: VFIFTTGKMSIASGHLGFFFLVL*TQVLDT
Trigger: TGTGTCAAGTACCTGGGTGCATAGCACAAGGAAAAA...AAACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGAAAATGAAAAC
41% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTACTGAGGTCATTTaGGCATATCCTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSCTEVI*AYPLQL
Trigger: TAGCTGGAGAGGATATGCCCAAATGACCTCAGTACA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCTTCATAGTAGTCCCTaGGGAGCAGCACCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLHSSP*GAAPGN
Trigger: ATTACCTGGTGCTGCTCCCCAGGGACTACTATGAAG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAATTCTTACAGAATCTaGAGGCTGTCTGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSENSYRI*RLSGGQ
Trigger: TTGACCCCCAGACAGCCTCCAGATTCTGTAAGAATT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTACCTCCGAATTTCTaGGGATTCCCGAAATATCCC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLPPNF*GFPKYP
Trigger: GGGATATTTCGGGAATCCCCAGAAATTCGGAGGTAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTACAACTGCATGGTTaGCAGCTACCTCCGAATTTC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLQLHG*QLPPNF
Trigger: GAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCAGGGCTGCTATCTTTaGGTTCTTGGTTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDQGCYL*VLGLCS
Trigger: ACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACAGGGCTGCTATCTTTaGGTTCTTGGTTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEQGCYL*VLGLCS
Trigger: ACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGCTCTCTCGTTTTCTTaGTTCAAGCCATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFALSFS*FKPFAC
Trigger: GCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCTCACTTGTCTCTGAATaGCTCCCAAAGCTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFSLVSE*LPKLSR
Trigger: ACGAGAGAGCTTTGGGAGCCATTCAGAGACAAGTGA...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCTGCAGCGCAATGTTaGTTTGCAACAAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDAAAQC*FATKMS
Trigger: ACTCATCTTTGTTGCAAACCAACATTGCGCTGCAGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATCCTTTATCACTGTCTaGAGGGCAGATTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESFITV*RADSDA
Trigger: TGCATCTGAATCTGCCCTCCAGACAGTGATAAAGGA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTTGAGTTGGGCCTTTaGAGAAACAAGGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLELGL*RNKDRD
Trigger: ATCTCTGTCCTTGTTTCTCCAAAGGCCCAACTCAAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTCTTGGTCAAGATCTaGTCCACTTGGAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLLVKI*STWSSA
Trigger: GGCTGAACTCCAAGTGGACCAGATCTTGACCAAGAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAGCATGTGGTTGAGTTaGAACTCGAGCATAGCCCGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSMWLS*NSSIAR
Trigger: ACGGGCTATGCTCGAGTTCCAACTCAACCACATGCT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTGTCTGTCCAAAGGTTaGGATGGGAGCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCCLSKG*DGSMWL
Trigger: CAACCACATGCTCCCATCCCAACCTTTGGACAGACA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTGTCTGTCCAAAGGTTaGGATGGGAGCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLCLSKG*DGSMWL
Trigger: CAACCACATGCTCCCATCCCAACCTTTGGACAGACA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTCTGCCGTTGTTTATaGCGTCTCCAACTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLCRCL*RLQLLS
Trigger: AGAGAGGAGTTGGAGACGCCATAAACAACGGCAGAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTAATCCAAATGAGGCCTaGAGGTGGTCAGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCNPNEA*RWSVGG
Trigger: ACCACCTACTGACCACCTCCAGGCCTCATTTGGATT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTATTTCTCAGAAGCTaGTCATCGATGAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLFLRS*SSMRSR
Trigger: ACGGCTTCTCATCGATGACCAGCTTCTGAGAAATAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTGTCCTGCAACAGCTaGTTGATACGAAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVSCNS*LIRKVL
Trigger: CAAGACTTTTCGTATCAACCAGCTGTTGCAGGACAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTAGCTTGAATAGCAAGTaGCTGGTGGGAATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSLNSK*LVGMSP
Trigger: TGGGGACATTCCCACCAGCCACTTGCTATTCAAGCT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCAGTGTCGTCAAATTaGCTGGAGCACCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSVSSN*LEHLQG
Trigger: ACCTTGGAGGTGCTCCAGCCAATTTGACGACACTGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAATAGGCTTGGGTTACTaGTCAGGACAACCATTCAGA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEIGLGY*SGQPFR
Trigger: TCTGAATGGTTGTCCTGACCAGTAACCCAAGCCTAT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACGATCAGGTAGTTTGTTaGTTAACTTATTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYDQVVC*LTYSLA
Trigger: AGCAAGTGAATAAGTTAACCAACAAACTACCTGATC...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTATGGCACTTGCATTCTaGACATCCACTGGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCMALAF*TSTGVF
Trigger: GAAAACCCCAGTGGATGTTCAGAATGCAAGTGCCAT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTACATCATTCTGTACTaGGGTCATTTGGGCATATCC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEYIILY*GHLGIS
Trigger: GGATATGCCCAAATGACCTCAGTACAGAATGATGTA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTACTCGGCAGGAAGATaGTCTCTTTGCTTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLYSAGR*SLCFEQ
Trigger: CTGCTCAAAGCAAAGAGATCATCTTCCTGCCGAGTA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTATTCCTGGTGTGATTaGAAATGGGTCTGCAAAACC +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSYSWCD*KWVCKT
Trigger: GGTTTTGCAGACCCATTTTCAATCACACCAGGAATA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAGGTGGCACTTTGATTaGCAAATCGCCCATAACTGG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLRWHFD*QIAHNW
Trigger: CCAGTTATGGGCGATTTGTCAATCAAAGTGCCACCT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGTCCTTCGCTTATGTaGGCTGTGACATTGATTATT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSPSLM*AVTLII
Trigger: AATAATCAATGTCACAGCTCACATAAGCGAAGGACT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTGTTAACACATATGCCTaGGCCATCCTGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCVNTYA*AILALI
Trigger: AATCAATGCCAGGATGGCTCAGGCATATGTGTTAAC...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGAGCACGAAGGTCACTaGGTTTGGCTTCGTATTCAT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCEHEGH*VWLRIH
Trigger: ATGAATACGAAGCCAAACTCAGTGACCTTCGTGCTC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCTTTCACTTGTCTCTaGATGGCTCCCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSFTCL*MAPKAL
Trigger: GAGAGCTTTGGGAGCCATTCAGAGACAAGTGAAAGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTGGTTAGATACTTGGTaGAATCACTCTGCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDWLDTW*NHSAGN
Trigger: ATTCCCTGCAGAGTGATTTCACCAAGTATCTAACCA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCTCCAGATTTACCATTaGACCTCATGGGGACAGCAA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLQIYH*TSWGQQ
Trigger: TTGCTGTCCCCATGAGGTTCAATGGTAAATCTGGAG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCTATCCACGGTGGTCTaGATTGTCTGTCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLSTVV*IVCPKV
Trigger: AACCTTTGGACAGACAATTCAGACCACCGTGGATAG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCAACAGCTGGTTaGTACGAAAAGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPATAG*YEKSWS
Trigger: AGACCAAGACTTTTCGTATCAACCAGCTGTTGCAGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGACCAGACGTCCTTTTaGAAGATAAAGAGCCATAAA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSDQTSF*KIKSHK
Trigger: TTTATGGCTCTTTATCTTTCAAAAGGACGTCTGGTC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTCTGGTTTGTGTCCTaGGTGAAGAATGATCTCGAG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVWFVS*VKNDLE
Trigger: CTCGAGATCATTCTTCACTCAGGACACAAACCAGAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGTGACAGCCATATTTaGCTCCCGCCCAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGDSHI*LPPKFF
Trigger: AAAGAATTTGGGCGGGAGGCAAATATGGCTGTCACC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCAAGCGGATGTTTGTTaGCTTGGTAAACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCQADVC*LGKLPQ
Trigger: CTGAGGGAGTTTACCAAGGCAACAAACATCCGCTTG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCTAAACTCAGGAAATaGCAGCGGATCAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEAKLRK*QRIKSK
Trigger: TTTGGATTTGATCCGCTGGCATTTCCTGAGTTTAGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATATATGGCCAGATACTaGTTCAGTTCCAGGGTTAAC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEYMARY*FSSRVN
Trigger: GTTAACCCTGGAACTGAAGCAGTATCTGGCCATATA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCAGTCCCATCTCTGTTaGAATTGCAGGGAACACACT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCQSHLC*NCREHT
Trigger: AGTGTGTTCCCTGCAATTGCAACAGAGATGGGACTG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCTGTCCCAGAGATCTaGTTTAAAAGAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSVPEI*FKRMCT
Trigger: TGTGCACATTCTTTTAAAGCAGATCTCTGGGACAGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCTTTTATCAGCTTCTaGTTCTCTGAGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPFISF*FSEVLS
Trigger: GGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCGCAATGTTGGTTTaGAACAAAGATGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSAMLV*NKDESA
Trigger: TGCAGACTCATCTTTGTTGCAAACCAACATTGCGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCTGGACTGACTTCTTaGTTTAGCTTCTTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDAGLTS*FSFFCV
Trigger: GACACAAAAGAAGCTAAAGCAAGAAGTCAGTCCAGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATCTGACCATGCTCTTTaGACTACTGATCATAGCATC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESDHAL*TTDHSI
Trigger: GATGCTATGATCAGTAGTGCAAAGAGCATGGTCAGA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCTGACCATGCTCTTTaGACTACTGATCATAGCATC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSDHAL*TTDHSI
Trigger: GATGCTATGATCAGTAGTGCAAAGAGCATGGTCAGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCACCCGATCCATAACTaGCTCCTTAGTCTCACTCTT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLHPIHN*LLSLTL
Trigger: AAGAGTGAGACTAAGGAGGCAGTTATGGATCGGGTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATCTTTCCCTGATTaGAATTGGAATTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSKSFPD*NWNSSQ
Trigger: CTGGGAGGAATTCCAATTGCAATCAGGGAAAGATTT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTGGTTTGTTTAAACTaGAGCCTCCCAGGGACACAT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVVCLN*SLPGTH
Trigger: ATGTGTCCCTGGGAGGCTGCAGTTTAAACAAACCAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTGGAGGATGTTGTCTaGATGTCCACAGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLEDVV*MSTANC
Trigger: ACAGTTTGCTGTGGACATGCAGACAACATCCTCCAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGAAGGTGAATTTCCTTaGTGTGAAATAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEEGEFP*CEIGLG
Trigger: ACCCAAGCCTATTTCACAGCAAGGAAATTCACCTTC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATACATGTAGCACTGAATaGCAAAGTGATGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDTCSTE*QSDGYP
Trigger: TGGATACCCATCACTTTGGCATTCAGTGCTACATGT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGACATGTAGCACTGAATaGCAAAGTGATGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPETCSTE*QSDGYP
Trigger: TGGATACCCATCACTTTGGCATTCAGTGCTACATGT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTACCAGGTAGTTTGTaGCCTCAAGGAATTGATCAT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELPGSL*PQGIDH
Trigger: ATGATCAATTCCTTGAGGGCACAAACTACCTGGTAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCATACTGTTGCTGCCTaGGTTGAAAGAGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLHTVAA*VERDRD
Trigger: ATCCCTGTCTCTTTCAACCCAGGCAGCAACAGTATG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTATCTTTGGGTTCTTaGTTTATGCAGTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELSLGS*FMQSPV
Trigger: GACTGGAGACTGCATAAACCAAGAACCCAAAGATAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAGGGCTGCTATCTTTaGGTTCTTGGTTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPQGCYL*VLGLCS
Trigger: ACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCTGCAGCGCAATGTTaGTTTGCAACAAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPAAAQC*FATKMS
Trigger: ACTCATCTTTGTTGCAAACCAACATTGCGCTGCAGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTACTGGCAGCATCTCTaGCCTGCTGAATTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLYWQHL*PAELVL
Trigger: GAGAACTAATTCAGCAGGCCAGAGATGCTGCCAGTA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTCTTGAGTTGGGCCTTTaGAGAAACAAGGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCLELGL*RNKDRD
Trigger: ATCTCTGTCCTTGTTTCTCCAAAGGCCCAACTCAAG...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAGCCTCTATCCACGGTaGTCTGAATTGTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSLYPR*SELSVQ
Trigger: TTGGACAGACAATTCAGACCACCGTGGATAGAGGCT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTTCCGAGCACTTTTTaGTTACTCCCACAGTATCAT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELPSTF*LLPQYH
Trigger: ATGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTTCCGAGCACTTTTTaGTTACTCCCACAGTATCAT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELPSTF*LLPQYH
Trigger: ATGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCAATTGTCCTCCTCTaGAGAATGAGGCAGATCGCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSIVLL*RMRQIA
Trigger: TGCGATCTGCCTCATTCTCCAGAGGAGGACAATTGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCAATTGTCCTCCTCTaGAGAATGAGGCAGATCGCA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSIVLL*RMRQIA
Trigger: TGCGATCTGCCTCATTCTCCAGAGGAGGACAATTGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTGGAGATTTAAAAATTaGGCCGCCGCTATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCWRFKN*AAAIAG
Trigger: ACCAGCGATAGCGGCGGCCCAATTTTTAAATCTCCA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTATTTCTCAGAAGCTaGTCATCGATGAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLFLRS*SSMRSR
Trigger: ACGGCTTCTCATCGATGACCAGCTTCTGAGAAATAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGAAACACCAGTCCTCTaGAGGATGTTGTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLETPVL*RMLSAC
Trigger: ACATGCAGACAACATCCTCCAGAGGACTGGTGTTTC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAAGCCTTCTTAGTTGTTaGGATTACAGACATGAGCCA +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRSLLSC*DYRHEP
Trigger: TGGCTCATGTCTGTAATCCCAACAACTAAGAAGGCT...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAGGCAGGTGTTAAAATaGATGATCCTCTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSERQVLK*MILLQT
Trigger: AGTCTGCAAGAGGATCATCCATTTTAACACCTGCCT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
3UTR CAA 72 bp TCACAACAGGGAAGATGTCCATTGCTTCAGGTCATCTaGGGTTTGACAAAAAGCAACATGAAAGTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: SQQGRCPLLQVI*GLTKSNMKVVV
Trigger: TACTACTACTTTCATGTTGCTTTTTGTCAAACCCAAGATGACCTGAAGCAATGGACATCTTCCCTGTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTAGGACCTTCAACATaGAGCTTGCATTGGCAATAC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVGPST*SLHWQY
Trigger: GTATTGCCAATGCAAGCTTCATGTTGAAGGTCCTAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGACTTGGCTTGGTAAGTaGGGTAACCACCATATGAAG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLTWLGK*GNHHMK
Trigger: CTTCATATGGTGGTTACCTCACTTACCAAGCCAAGT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTTAACACATATGCCTaGGCCATCCTGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVNTYA*AILALI
Trigger: AATCAATGCCAGGATGGCTCAGGCATATGTGTTAAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCTATTTTTGATCCATaGTTTGAAATGGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSIFDP*FEMAER
Trigger: CCGTTCTGCCATTTCAAATCATGGATCAAAAATAGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCATCTCGGAGAGTTGTaGGATTGGTGTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCHLGEL*DWCLSL
Trigger: AAGTGATAGACACCAATCTCACAACTCTCCGAGATG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR TCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACTATATTTAGAGATATaGAGCGATCCCCGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELYLEI*SDPRFL
Trigger: CAGAAAACGGGGATCGCTTCATATCTCTAAATATAG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTATATTTAGAGATATaGAGCGATCCCCGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELYLEI*SDPRFL
Trigger: CAGAAAACGGGGATCGCTTCATATCTCTAAATATAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGTTTGTATCTCACCATaGGCTTGCCATCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDVCISP*ACHLLY
Trigger: ATATAGAAGATGGCAAGCTCATGGTGAGATACAAAC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGGAGTTTTCCAATTTTaGTCTGAATCGAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEGVFQF*SESNGL
Trigger: GAGACCATTCGATTCAGATCAAAATTGGAAAACTCC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGACAGGGATGTGATTaGCATGAATATTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGQGCD*HEYSSD
Trigger: GTCTGAGGAATATTCATGTCAATCACATCCCTGTCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGACAGGGATGTGATTaGCATGAATATTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGQGCD*HEYSSD
Trigger: GTCTGAGGAATATTCATGTCAATCACATCCCTGTCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGATTTGAATGTCCGTTaGAATTGCAGGGAACACACC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLDLNVR*NCREHT
Trigger: GGTGTGTTCCCTGCAATTGCAACGGACATTCAAATC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCACATCCAGTTCTTTTaGGCTTTGTGTTGCCCGATT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLHIQFF*ALCCPI
Trigger: AATCGGGCAACACAAAGCGCAAAAGAACTGGATGTG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCTGTCCCAGAGATCTaGTTTAAAAGAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESVPEI*FKRMCT
Trigger: TGTGCACATTCTTTTAAAGCAGATCTCTGGGACAGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGCTTCTCTGAGGTaGTTTCCAAAGTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSASLR*FPKFLF
Trigger: GAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCCTTTTATCAGCTTCTaGTTCTCTGAGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLPFISF*FSEVLS
Trigger: GGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTTTATCAGCTTCTaGTTCTCTGAGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPFISF*FSEVLS
Trigger: GGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCATTCACCGAGTTATCTaGATCAGTCAGAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSIHRVI*ISQSLF
Trigger: AAAAAGGCTCTGACTGATGCAGATAACTCGGTGAAT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGATTCACCGAGTTATCTaGATCAGTCAGAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEIHRVI*ISQSLF
Trigger: AAAAAGGCTCTGACTGATGCAGATAACTCGGTGAAT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAAATCTTTCCCTGATTaGAATTGGAATTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSKSFPD*NWNSSQ
Trigger: CTGGGAGGAATTCCAATTGCAATCAGGGAAAGATTT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAAATCTTTCCCTGATTaGAATTGGAATTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEKSFPD*NWNSSQ
Trigger: CTGGGAGGAATTCCAATTGCAATCAGGGAAAGATTT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCTTCAAATTTTTCATaGAGCCTCGGAAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSSNFS*SLGKQA
Trigger: CGCCTGCTTTCCGAGGCTGCATGAAAAATTTGAAGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAAGGTGAATTTCCTTaGTGTGAAATAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPEGEFP*CEIGLG
Trigger: ACCCAAGCCTATTTCACAGCAAGGAAATTCACCTTC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTTACAACTGCATGGTTaGCAGCTACCTCCGAATTTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLQLHG*QLPPNF
Trigger: GAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCCTTTATCACTGTCTaGAGGGCAGATTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSFITV*RADSDA
Trigger: TGCATCTGAATCTGCCCTCCAGACAGTGATAAAGGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGATCAGGTAGTTTGTTaGTTAACTTATTCACCGAGT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSDQVVC*LTYSPS
Trigger: ACTCGGTGAATAAGTTAACCAACAAACTACCTGATC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTGTCCTGCAACAGCTaGTTGATACGAAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVSCNS*LIRKVL
Trigger: CAAGACTTTTCGTATCAACCAGCTGTTGCAGGACAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAACAAGCTTAAATTCTaGCCCCAACAATACAGAGTG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPENKLKF*PQQYRV
Trigger: CACTCTGTATTGTTGGGGCCAGAATTTAAGCTTGTT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAACAAGCTTAAATTCTaGCCCCAACAATACAGAGTG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSNKLKF*PQQYRV
Trigger: CACTCTGTATTGTTGGGGCCAGAATTTAAGCTTGTT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTATAGGCTTGGGTTACTaGTCAGGACAACCATTCAGA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCIGLGY*SGQPFR
Trigger: TCTGAATGGTTGTCCTGACCAGTAACCCAAGCCTAT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGATATGTCTCCCCAATTaGACTGCATATTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEICLPN*TAYSLR
Trigger: CCTTAAGGAATATGCAGTCCAATTGGGGAGACATAT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTCAGAAGAGAACATTaGGTTGAAGGGGATGTGACT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVRREH*VEGDVT
Trigger: AGTCACATCCCCTTCAACCCAATGTTCTCTTCTGAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAGTCCTTCGCTTATGTaGGCTGTGACATTGATTATT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSPSLM*AVTLII
Trigger: AATAATCAATGTCACAGCTCACATAAGCGAAGGACT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGATCCTGGCATTGATTTaGATGTCCGTTGCAATTGCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLILALI*MSVAIA
Trigger: TGCAATTGCAACGGACATTCAAATCAATGCCAGGAT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTATCCTGGCATTGATTTaGATGTCCGTTGCAATTGCA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCILALI*MSVAIA
Trigger: TGCAATTGCAACGGACATTCAAATCAATGCCAGGAT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTTTCTGGAATTTACTTaGGCCTTTTCTTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEFLEFT*AFSCKV
Trigger: GACTTTGCAAGAAAAGGCTCAAGTAAATTCCAGAAA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTGGTTAGATACTTGGTaGAATCACTCTGCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLWLDTW*NHSAGN
Trigger: ATTCCCTGCAGAGTGATTTCACCAAGTATCTAACCA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGTATACAAGGGTTTTaGATCCAGCTGAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPGIQGF*IQLKVL
Trigger: AAGAACTTTCAGCTGGATTCAAAACCCTTGTATACC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGATCCACATTATGTTTGTaGGGGTCATTCATGTCATTA +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRSTLCL*GSFMSL
Trigger: TAATGACATGAATGACCCTCACAAACATAATGTGGA...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAGGATTGTTTATATTaGACACTTCAGCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPQDCLY*TLQHGH
Trigger: ATGGCCATGCTGAAGTGTGCAATATAAACAATCCTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTTTTGCGCTTTGTGTTaGCCGATTAACATTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEFCALC*PINIVV
Trigger: AACAACAATGTTAATCGGGCAACACAAAGCGCAAAA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATGCTTTAAAAGAATGTaGACATTCCGGATGACATTT +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSCFKRM*TFRMTF
Trigger: AAATGTCATCCGGAATGTGCACATTCTTTTAAAGCA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAGCGCAATGTTGGTTTaGAACAAAGATGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSAMLV*NKDESA
Trigger: TGCAGACTCATCTTTGTTGCAAACCAACATTGCGCT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTACAATATTCAGGGTTTaGTGTAGGTTGTTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPTIFRV*CRLLRA
Trigger: AGCTCTCAACAACCTACAGCAAACCCTGAATATTGT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGATGATCTAATAATATaGCACTGGGTTGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEDDLII*HWVERS
Trigger: AGACCTTTCAACCCAGTGGCATATTATTAGATCATC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGATGATCTAATAATATaGCACTGGGTTGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSDDLII*HWVERS
Trigger: AGACCTTTCAACCCAGTGGCATATTATTAGATCATC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAGATGATCTAATAATATaGCACTGGGTTGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRDDLII*HWVERS
Trigger: AGACCTTTCAACCCAGTGGCATATTATTAGATCATC...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGAAGGTGAATTTCCTTaGTGTGAAATAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCEGEFP*CEIGLG
Trigger: ACCCAAGCCTATTTCACAGCAAGGAAATTCACCTTC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTATCTTTGGGTTCTTaGTTTATGCAGTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLSLGS*FMQSPV
Trigger: GACTGGAGACTGCATAAACCAAGAACCCAAAGATAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTTTTGCCAGCAGATCTaGAAAGTTCTCTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEFCQQI*KVLLLC
Trigger: ACAAAGTAAGAGAACTTTCCAGATCTGCTGGCAAAA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTTTGCCAGCAGATCTaGAAAGTTCTCTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEFCQQI*KVLLLC
Trigger: ACAAAGTAAGAGAACTTTCCAGATCTGCTGGCAAAA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTAATAATATGCCACTaGGTTGAAAGGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLIICH*VERSEI
Trigger: GATTTCAGACCTTTCAACCCAGTGGCATATTATTAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGACTAATAATATGCCACTaGGTTGAAAGGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRLIICH*VERSEI
Trigger: GATTTCAGACCTTTCAACCCAGTGGCATATTATTAG...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAATCCATATACGTCTGTaGAGATTTAAAAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRIHIRL*RFKNWA
Trigger: GGCCCAATTTTTAAATCTCCACAGACGTATATGGAT...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS-3UTR CCA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACTCAGTGATAACCTCTaGACAAAAACATTGCTAATA +
Preference number: 4 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSLSDNL*TKTLLI
Trigger: TATTAGCAATGTTTTTGTCCAGAGGTTATCACTGAG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAACAAGCTTAAATTCTaGCCCCAACAATACAGAGTG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPNKLKF*PQQYRV
Trigger: CACTCTGTATTGTTGGGGCCAGAATTTAAGCTTGTT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CCA 90 bp GTAAAGAATATTGGGTTTCCATTTATGGGAGAGATAAAAAGATCCCATAGAAGCTTCAGGTTTAGGAAGTaGCAGAGAAGCTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: VKNIGFPFMGEIKRSHRSFRFRK*QRSSIF
Trigger: GAAGATAGAGCTTCTCTGCCACTTCCTAAACCTGAA...GCTTCTATGGGATCTTTTTATCTCTCCCATAAATGGAAACCCAATATTCTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590104.1
CDS-3UTR TCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTTTCTGGAATTTACTTaGGCCTTTTCTTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPFLEFT*AFSCKV
Trigger: GACTTTGCAAGAAAAGGCTCAAGTAAATTCCAGAAA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTATATTTAGAGATATaGAGCGATCCCCGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLYLEI*SDPRFL
Trigger: CAGAAAACGGGGATCGCTTCATATCTCTAAATATAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTTTGTATCTCACCATaGGCTTGCCATCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVCISP*ACHLLY
Trigger: ATATAGAAGATGGCAAGCTCATGGTGAGATACAAAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGAGTTTTCCAATTTTaGTCTGAATCGAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGVFQF*SESNGL
Trigger: GAGACCATTCGATTCAGATCAAAATTGGAAAACTCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGACCAGACGTCCTTTTaGAAGATAAAGAGCCATAAA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCDQTSF*KIKSHK
Trigger: TTTATGGCTCTTTATCTTTCAAAAGGACGTCTGGTC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGTATACAAGGGTTTTaGATCCAGCTGAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGIQGF*IQLKVL
Trigger: AAGAACTTTCAGCTGGATTCAAAACCCTTGTATACC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp AGTTTGATGGAGAGAAAACAGTTAAGCCAATGTTTTACCTTATGGCAAAGATGGTTATGGCAAAGATGGTaGAAATGGCACAAATTACTG +
Preference number: 4 (lower is better)
Translates to: SLMERKQLSQCFTLWQRWLWQRW*KWHKLL
Trigger: CAGTAATTTGTGCCATTTTCACCATCTTTGCCATAA...CCATCTTTGCCATAAGGTAAAACATTGGCTTAACTGTTTTCTCTCCATCAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590104.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAGAGAACACTGTAGTTaGAGCTGTAAATGTTCACCT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLREHCS*SCKCSP
Trigger: AGGTGAACATTTACAGCTGCAACTACAGTGTTCTCT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCTTTTGCGCTTTGTGTTaGCCGATTAACATTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFFCALC*PINIVV
Trigger: AACAACAATGTTAATCGGGCAACACAAAGCGCAAAA...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATGCTTTAAAAGAATGTaGACATTCCGGATGACATTT +
Preference number: 4 (lower is better)
Translates to: IKYTCSTECQSDGYPWSECFKRM*TFRMTF
Trigger: AAATGTCATCCGGAATGTGCACATTCTTTTAAAGCA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGTCCCAGAGATCTaGTTTAAAAGAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSVPEI*FKRMCT
Trigger: TGTGCACATTCTTTTAAAGCAGATCTCTGGGACAGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGACAATATTCAGGGTTTaGTGTAGGTTGTTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLTIFRV*CRLLRA
Trigger: AGCTCTCAACAACCTACAGCAAACCCTGAATATTGT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR GCA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGGTGTAATTAAGCCTTaGAAACTGATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDGVIKP*KLINSL
Trigger: CAGAGAATTTATCAGTTTGCAAGGCTTAATTACACC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGTGTAATTAAGCCTTaGAAACTGATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGVIKP*KLINSL
Trigger: CAGAGAATTTATCAGTTTGCAAGGCTTAATTACACC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTACCCTCATCAGTATATaGTCAGTGATTATCTGTAGA +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPTLISI*SVIICR
Trigger: TCTACAGATAATCACTGAGCATATACTGATGAGGGT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTATCCATATACGTCTGTaGAGATTTAAAAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPIHIRL*RFKNWA
Trigger: GGCCCAATTTTTAAATCTCCACAGACGTATATGGAT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTCAGTGATAACCTCTaGACAAAAACATTGCTAATA +
Preference number: 4 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELSDNL*TKTLLI
Trigger: TATTAGCAATGTTTTTGTCCAGAGGTTATCACTGAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTCTATTTTTGATCCATaGTTTGAAATGGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSIFDP*FEMAER
Trigger: CCGTTCTGCCATTTCAAATCATGGATCAAAAATAGA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR TCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTTTCTGGAATTTACTTaGGCCTTTTCTTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCFLEFT*AFSCKV
Trigger: GACTTTGCAAGAAAAGGCTCAAGTAAATTCCAGAAA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGATTGTAGTATCCAATTaGACACTTCTCACAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLIVVSN*TLLTVV
Trigger: GACAACTGTGAGAAGTGTGCAATTGGATACTACAAT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR GCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTTTTGCGCTTTGTGTTaGCCGATTAACATTGTTGTT +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCFCALC*PINIVV
Trigger: AACAACAATGTTAATCGGGCAACACAAAGCGCAAAA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR GCA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTTGCTTTAAAAGAATGTaGACATTCCGGATGACATTT +
Preference number: 4 (lower is better)
Translates to: THKTLISICSVIICRRLCCFKRM*TFRMTF
Trigger: AAATGTCATCCGGAATGTGCACATTCTTTTAAAGCA...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR GCA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGTGTAATTAAGCCTTaGAAACTGATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPGVIKP*KLINSL
Trigger: CAGAGAATTTATCAGTTTGCAAGGCTTAATTACACC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCTAATAATATGCCACTaGGTTGAAAGGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLIICH*VERSEI
Trigger: GATTTCAGACCTTTCAACCCAGTGGCATATTATTAG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGATCCATATACGTCTGTaGAGATTTAAAAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLIHIRL*RFKNWA
Trigger: GGCCCAATTTTTAAATCTCCACAGACGTATATGGAT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CCA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCCTCAGTGATAACCTCTaGACAAAAACATTGCTAATA +
Preference number: 4 (lower is better)
Translates to: SSDEQILCRGYGNACVAFLSDNL*TKTLLI
Trigger: TATTAGCAATGTTTTTGTCCAGAGGTTATCACTGAG...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CCA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTAGTGATGGGTATCCATaGTCAGAATTCAAAATTAGA +
Preference number: 4 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCSDGYP*SEFKIR
Trigger: TCTAATTTTGAATTCTGACCATGGATACCCATCACT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS CCA 90 bp GGCCGCTCCCCTTGCTCCACGCGCTGGAAGCCCGCGGCGTGGGGGTaGCCTCTCAGCTCTGGAACCTGCCGCGGCTGGAGCGGGCACCAG +
Preference number: 5 (lower is better)
Translates to: GRSPCSTRWKPAAWG*PLSSGTCRGWSGHQ
Trigger: CTGGTGCCCGCTCCAGCCGCGGCAGGTTCCAGAGCTGAGAGGCCACCCCCACGCCGCGGGCTTCCAGCGCGTGGAGCAAGGGGAGCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS CCA 90 bp CTCCACGCGCTGGAAGCCCGCGGCGTGGGGGTGGCCTCTCAGCTCTaGAACCTGCCGCGGCTGGAGCGGGCACCAGCCGGATCAGGAACT +
Preference number: 5 (lower is better)
Translates to: LHALEARGVGVASQL*NLPRLERAPAGSGT
Trigger: AGTTCCTGATCCGGCTGGTGCCCGCTCCAGCCGCGGCAGGTTCCAGAGCTGAGAGGCCACCCCCACGCCGCGGGCTTCCAGCGCGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS CCA 90 bp TGCACTGCCCGCTGTCCCGGTCACACTCCGGCATGGCAGCCTCGATaGTGCCCCTCCTGGAACAGTTGCAGCCTTCGCAGCCGGCCATGG +
Preference number: 5 (lower is better)
Translates to: CTARCPGHTPAWQPR*CPSWNSCSLRSRPW
Trigger: CCATGGCCGGCTGCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGCCGGAGTGTGACCGGGACAGCGGGCAGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 90 bp GCTCCAGAAGCCCTGCGCTGGCACTCAGGCCCTGCAGCTGAGACTTaGCCAGGCGGAGCTGCTCGCCCATGGTGGCCAGGTCGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: APEALRWHSGPAAET*PGGAARPWWPGRSG
Trigger: TCCTGAACGACCTGGCCACCATGGGCGAGCAGCTCCGCCTGGTCAAGTCTCAGCTGCAGGGCCTGAGTGCCAGCGCAGGGCTTCTGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS GCA 90 bp CCCCAGGTAGGAGGTGGGTGCGACCCAGGACGCGCTGTGGATGGTTaGGGGCAGCTCCTGGAGATCCGCCACCATACTGTTGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PQVGGGCDPGRAVDG*GQLLEIRHHTVAAW
Trigger: CCAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGTCGCACCCACCTCCTACCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 90 bp TCACACTCGTGGCTCTGCTCCCAAGCGGCGGGCCGCCAGCGCCTCTaGTTGTACCCTGTGCAGCAGCGATCACACGTCTCCCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: SHSWLCSQAAGRQRL*LYPVQQRSHVSPQV
Trigger: CACCTGTGGGGAGACGTGTGATCGCTGCTGCACAGGGTACAATCAGAGGCGCTGGCGGCCCGCCGCTTGGGAGCAGAGCCACGAGTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 90 bp ACCACAGCTGCACGGCTTGCAGCGTGGGAATCCGTAGTGGCCTGTTaGACAGCGGGTGCACTGCCGCCCGATGACGTTGGGCTGGCATGG +
Preference number: 5 (lower is better)
Translates to: TTAARLAAWESVVAC*TAGALPPDDVGLAW
Trigger: CCATGCCAGCCCAACGTCATCGGGCGGCAGTGCACCCGCTGTGCAACAGGCCACTACGGATTCCCACGCTGCAAGCCGTGCAGCTGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 90 bp GACACTGCCCCAGGGCTGCCCCAAAGATCCACAGCCATCCCATGCTaGAGGCTGACCGCCTCACTGCTGGAGGCATCCCGGTTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: DTAPGLPQRSTAIPC*RLTASLLEASRFLD
Trigger: GTCCAGGAACCGGGATGCCTCCAGCAGTGAGGCGGTCAGCCTGCAGCATGGGATGGCTGTGGATCTTTGGGGCAGCCCTGGGGCAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS GCA 90 bp CCAGACACTGCCCCAGGGCTGCCCCAAAGATCCACAGCCATCCCATaGTGCAGGCTGACCGCCTCACTGCTGGAGGCATCCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PDTAPGLPQRSTAIP*CRLTASLLEASRFL
Trigger: CAGGAACCGGGATGCCTCCAGCAGTGAGGCGGTCAGCCTGCAGCATGGGATGGCTGTGGATCTTTGGGGCAGCCCTGGGGCAGTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS CCA 90 bp TGGGCTTGCATCTGCACTGCCCGCTGTCCCGGTCACACTCCGGCATaGCAGCCTCGATGGTGCCCCTCCTGGAACAGTTGCAGCCTTCGC +
Preference number: 5 (lower is better)
Translates to: WACICTARCPGHTPA*QPRWCPSWNSCSLR
Trigger: GCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGCCGGAGTGTGACCGGGACAGCGGGCAGTGCAGATGCAAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 90 bp TGTCCCCCAGGTAGGAGGTGGGTGCGACCCAGGACGCGCTGTGGATaGTTGCGGGCAGCTCCTGGAGATCCGCCACCATACTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CPPGRRWVRPRTRCG*LRAAPGDPPPYCCC
Trigger: GCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGTCGCACCCACCTCCTACCTGGGGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 90 bp TCTGCTCCCAAGCGGCGGGCCGCCAGCGCCTCTGATTGTACCCTGTaGAGCAGCGATCACACGTCTCCCCACAGGTGTGGTGCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SAPKRRAASASDCTL*SSDHTSPHRCGAGI
Trigger: AATGCCAGCACCACACCTGTGGGGAGACGTGTGATCGCTGCTGCACAGGGTACAATCAGAGGCGCTGGCGGCCCGCCGCTTGGGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 90 bp GGAACAGTTGCAGCCTTCGCAGCCGGCCATGGGGTGGAAGCTGAATaGGTGTGTCTCACACACCTCACACTGGGGCCTGACCGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: GTVAAFAAGHGVEAE*VCLTHLTLGPDRAG
Trigger: CCCCGCACGGTCAGGCCCCAGTGTGAGGTGTGTGAGACACACTCATTCAGCTTCCACCCCATGGCCGGCTGCGAAGGCTGCAACTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 90 bp GTGGGTGCGACCCAGGACGCGCTGTGGATGGTTGCGGGCAGCTCCTaGAGATCCGCCACCATACTGTTGCTGCCTGGGTTGAAAGAGACA +
Preference number: 5 (lower is better)
Translates to: VGATQDALWMVAGSS*RSATILLLPGLKET
Trigger: TGTCTCTTTCAACCCAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGTCGCACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 90 bp CCACTTGGAGTTCAGCCTCACGGTCCCCCAGGTTGTAGACACAGGTaGGCTGGCCATCCACAACTGCCATGCCGATGTAGTCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: PLGVQPHGPPGCRHR*AGHPQLPCRCSPGR
Trigger: CCTCCCGGGACTACATCGGCATGGCAGTTGTGGATGGCCAGCTCACCTGTGTCTACAACCTGGGGGACCGTGAGGCTGAACTCCAAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp CCACCCGCCATCCACCGACACCTGCGCGGGAAACGTCGGGTGCGCTaGTTGGTAAAAATGGATGACAAAGACGTATCGGCCCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PPAIHRHLRGKRRVR*LVKMDDKDVSAQVW
Trigger: CCACACCTGGGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCGCACCCGACGTTTCCCGCGCAGGTGTCGGTGGATGGCGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 90 bp CGACATGCTCTCGGCACTGGCACACTCCCGAGGGCCCACTGCACATaGAGGACAATGCCCCACCAATGTCACACTGACACCCTTGACACC +
Preference number: 5 (lower is better)
Translates to: RHALGTGTLPRAHCT*RTMPHQCHTDTLDT
Trigger: GGTGTCAAGGGTGTCAGTGTGACATTGGTGGGGCATTGTCCTCCATGTGCAGTGGGCCCTCGGGAGTGTGCCAGTGCCGAGAGCATGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS TCA 90 bp CCCAAACTGGAGGGCTCCATGATTGGCCTGGGTCTTGGGAAGTGGTaGGCAAGCATCTTGCCACACCTTCACGCTCCTTGGGGAGGCCAC +
Preference number: 5 (lower is better)
Translates to: PKLEGSMIGLGLGKW*ASILPHLHAPWGGH
Trigger: GTGGCCTCCCCAAGGAGCGTGAAGGTGTGGCAAGATGCTTGCTCACCACTTCCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp TTCCCACGACATGCTCTCGGCACTGGCACACTCCCGAGGGCCCACTaGACATGGAGGACAATGCCCCACCAATGTCACACTGACACCCTT +
Preference number: 5 (lower is better)
Translates to: FPRHALGTGTLPRAH*TWRTMPHQCHTDTL
Trigger: AAGGGTGTCAGTGTGACATTGGTGGGGCATTGTCCTCCATGTGCAGTGGGCCCTCGGGAGTGTGCCAGTGCCGAGAGCATGTCGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS TCA 90 bp GTGCCACTGTCCATCACACAGAGACTGCTTTGGTGTGACCGACGTTaGGGTCCCACCTGCCCCACTGTCCATAGAGGCCGTGACCTTTCC +
Preference number: 5 (lower is better)
Translates to: VPLSITQRLLWCDRR*GPTCPTVHRGRDLS
Trigger: GGAAAGGTCACGGCCTCTATGGACAGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGACAGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp ATCCCGGTGCACACCTTTCACACTGTGTTCCTGTGTACCCAGCTTTaGAGGAGCACCGCACGTCTCCCCCATTCACCACACAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: IPVHTFHTVFLCTQL*RSTARLPHSPHSQW
Trigger: CCACTGGCTGTGTGGTGAATGGGGGAGACGTGCGGTGCTCCTGCAAAGCTGGGTACACAGGAACACAGTGTGAAAGGTGTGCACCGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS GCA 90 bp CACTGTCTGGAGGGCAGATTCAGATGCACTGGCAGCCCTGTTGGCTaGGTCCTCGGCCGCTTTGATGGCATTGAGGATGTTCTCGTAGGC +
Preference number: 5 (lower is better)
Translates to: HCLEGRFRCTGSPVG*VLGRFDGIEDVLVG
Trigger: GCCTACGAGAACATCCTCAATGCCATCAAAGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGCATCTGAATCTGCCCTCCAGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp GTCAAATTGGCTGCCACCGAGTGCCACTGTCCATCACACAGAGACTaGTTTGGTGTGACCGACGTTGAGGTCCCACCTGCCCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: VKLAATECHCPSHRD*FGVTDVEVPPAPLS
Trigger: GGACAGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGACAGTGGCACTCGGTGGCAGCCAATTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588004.1
CDS CCA 90 bp GCCTCACTGCCACGGGTCTTGGCTCCCCATCAAGCAGGAAGTGTCTaGCCTCACAAGCCAGGGTACAGGGGAATCTGGTCACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: ASLPRVLAPHQAGSV*PHKPGYRGIWSLAN
Trigger: ATTTGCCAGTGACCAGATTCCCCTGTACCCTGGCTTGTGAGGCCAGACACTTCCTGCTTGATGGGGAGCCAAGACCCGTGGCAGTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 90 bp GGTTGCGGGCAGCTCCTGGAGATCCGCCACCATACTGTTGCTGCCTaGGTTGAAAGAGACAGGGATGTCCACTCTGTCTGCTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GCGQLLEIRHHTVAA*VERDRDVHSVCCLQ
Trigger: CTGGAGACAGCAGACAGAGTGGACATCCCTGTCTCTTTCAACCCAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGCCTTCGGCAATCACTaGATCCCGGCAGCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAAFGNH*IPAAKH
Trigger: GTGCTTGGCTGCCGGGATCAAGTGATTGCCGAAGGC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACCTGTGATTCTGGGCTaGCATCTGCACTGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAPVILG*HLHCPL
Trigger: CAGCGGGCAGTGCAGATGCAAGCCCAGAATCACAGG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTACGCGCTGTGGATGGTaGCGGGCAGCTCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVTRCGW*RAAPGD
Trigger: ATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGT...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp ACACCTGCGCGGGAAACGTCGGGTGCGCTGCTTGGTAAAAATGGATaGCAAAGACGTATCGGCCCAGGTGTGGTACACGTCCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TPARETSGALLGKNG*QRRIGPGVVHVLSG
Trigger: CCCTGAGAGGACGTGTACCACACCTGGGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCGCACCCGACGTTTCCCGCGCAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 90 bp TTTATGGTGACTGCCACCGAGTGCCACTGTCCATCACACAGAGACTaGTTTGGTGTGACCGACGTTGAGGTCCCACCTGCCCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: FMVTATECHCPSHRD*FGVTDVEVPPAPLS
Trigger: GGACAGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGACAGTGGCACTCGGTGGCAGTCACCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp TCACATCGAGGGCCCTCAACCCCAGGGCGGCACAGGCACCGTCCGTaGGCATCACATATTTCAGGGAGAACACCTTCCAGATTACAGTCA +
Preference number: 5 (lower is better)
Translates to: SHRGPSTPGRHRHRP*ASHISGRTPSRLQS
Trigger: TGACTGTAATCTGGAAGGTGTTCTCCCTGAAATATGTGATGCCCACGGACGGTGCCTGTGCCGCCCTGGGGTTGAGGGCCCTCGATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 90 bp ACTCACAAGGCAGGGCGCCCTTGTGGTAAAAGGCCACCAGGGACCTaGCGGAATTCTTACAGAATCTGGAGGCTGTCTGGGGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: THKAGRPCGKRPPGT*RNSYRIWRLSGGQG
Trigger: ACCTTGACCCCCAGACAGCCTCCAGATTCTGTAAGAATTCCGCCAGGTCCCTGGTGGCCTTTTACCACAAGGGCGCCCTGCCTTGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 90 bp TCCCTCGACCACGTGCACTCGTCCATGATGCAGCCGGTCTGGCCGTaGGGTGTTTGTCTCCTCATAGATGATGGACATGTGCTGACCAGT +
Preference number: 5 (lower is better)
Translates to: SLDHVHSSMMQPVWP*GVCLLIDDGHVLTS
Trigger: ACTGGTCAGCACATGTCCATCATCTATGAGGAGACAAACACCCCACGGCCAGACCGGCTGCATCATGGACGAGTGCACGTGGTCGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 90 bp TCGGCACTGGCACACTCCCGAGGGCCCACTGCACATGGAGGACAATaGCCCACCAATGTCACACTGACACCCTTGACACCCAAAGTAATT +
Preference number: 5 (lower is better)
Translates to: SALAHSRGPTAHGGQ*PTNVTLTPLTPKVI
Trigger: AATTACTTTGGGTGTCAAGGGTGTCAGTGTGACATTGGTGGGGCATTGTCCTCCATGTGCAGTGGGCCCTCGGGAGTGTGCCAGTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS GCA 90 bp ATGGCTCCCAAAGCTCTCTCGTTTTCTTGGTTCAAGCCATTTGCCTaGTTGGCTTGGGCAGCTGCCTCCTGCAGCCGAGCACGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: MAPKALSFSWFKPFA*LAWAAASCSRARRS
Trigger: TGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGCTTTGGGAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp CTGAATGGCTCCCAAAGCTCTCTCGTTTTCTTGGTTCAAGCCATTTaGCTGCTTGGCTTGGGCAGCTGCCTCCTGCAGCCGAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: LNGSQSSLVFLVQAI*LLGLGSCLLQPSTK
Trigger: CTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGCTTTGGGAGCCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp GAAGTTTCCCTCGACCACGTGCACTCGTCCATGATGCAGCCGGTCTaGCCGTGGGGTGTTTGTCTCCTCATAGATGATGGACATGTGCTG +
Preference number: 5 (lower is better)
Translates to: EVSLDHVHSSMMQPV*PWGVCLLIDDGHVL
Trigger: CAGCACATGTCCATCATCTATGAGGAGACAAACACCCCACGGCCAGACCGGCTGCATCATGGACGAGTGCACGTGGTCGAGGGAAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 90 bp TGGGAATGTCCCCAAACTGGAGGGCTCCATGATTGGCCTGGGTCTTaGGAAGTGGTGAGCAAGCATCTTGCCACACCTTCACGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WECPQTGGLHDWPGS*EVVSKHLATPSRSL
Trigger: CAAGGAGCGTGAAGGTGTGGCAAGATGCTTGCTCACCACTTCCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTTTGGGGACATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCATGCCGCCCGATGACGTaGGGCTGGCATGGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLACRPMT*GWHGHC
Trigger: GCAGTGCCCATGCCAGCCCAACGTCATCGGGCGGCA...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACTTGGTTCAAGCCATTaGCCTGCTTGGCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKALGSSH*PAWLGQ
Trigger: CTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCAGCACTGGCAGCCCTGTaGGCTGCGTCCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSALAAL*AASSAA
Trigger: AGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGC...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp CTGCCCCAGATCCAAGGTGAGGTTGACTCTGTTGTACTGTGTGCCTaGGGACAGGGGAGGGCTTTGCCACCAACGTTCAGATCCATCGAT +
Preference number: 5 (lower is better)
Translates to: LPQIQGEVDSVVLCA*GQGRALPPTFRSID
Trigger: ATCGATGGATCTGAACGTTGGTGGCAAAGCCCTCCCCTGTCCTCAGGCACACAGTACAACAGAGTCAACCTCACCTTGGATCTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 90 bp CCACAGCAAACTGTGACCTGGGTTTCAGCAGCTCCTGAGGAAGCTTaGATAGCAAGTGGCTGGTGGGAATGTCCCCAAACTGGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: PQQTVTWVSAAPEEA*IASGWWECPQTGGL
Trigger: GAGCCCTCCAGTTTGGGGACATTCCCACCAGCCACTTGCTATTCAAGCTTCCTCAGGAGCTGCTGAAACCCAGGTCACAGTTTGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp ATCCATCTTCACAGGTGTCGCAGGAATCGCCACCCACATGGGACTTaGAGTGACAGTCACCATCTCCCTGCCTACACTCTCCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: IHLHRCRRNRHPHGT*SDSHHLPAYTLQFH
Trigger: GTGGAACTGGAGAGTGTAGGCAGGGAGATGGTGACTGTCACTGCAAGTCCCATGTGGGTGGCGATTCCTGCGACACCTGTGAAGATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS GCA 90 bp CTCGTTTTCTTGGTTCAAGCCATTTGCCTGCTTGGCTTGGGCAGCTaGCTCCTGCAGCCGAGCACGAAGGTCACTGAGTTTGGCTTCGTA +
Preference number: 5 (lower is better)
Translates to: LVFLVQAICLLGLGS*LLQPSTKVTEFGFV
Trigger: TACGAAGCCAAACTCAGTGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp ACGGTCCCCCAGGTTGTAGACACAGGTGAGCTGGCCATCCACAACTaGCATGCCGATGTAGTCCCGGGAGGCATCTTTATTTCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: TVPQVVDTGELAIHN*HADVVPGGIFISKV
Trigger: TACCTTGGAAATAAAGATGCCTCCCGGGACTACATCGGCATGGCAGTTGTGGATGGCCAGCTCACCTGTGTCTACAACCTGGGGGACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp TCGTCAAATTGGCTGGAGCACCTCCAAGGTGTAGTGGCTCTTGAGTaGTGGCAGGTGGGAAGGGGATCTGTCCAGCTGTGTAGCTACTGT +
Preference number: 5 (lower is better)
Translates to: SSNWLEHLQGVVALE*WQVGRGSVQLCSYC
Trigger: ACAGTAGCTACACAGCTGGACAGATCCCCTTCCCACCTGCCAGCACTCAAGAGCCACTACACCTTGGAGGTGCTCCAGCCAATTTGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp AGCTTGCCTGCTGCCGCTCAACATCTGGATCATAGTAACAGTTGCTaGCATGGCCGTGGCAGTTGCATGCTTCACACTCGTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: SLPAAAQHLDHSNSC*HGRGSCMLHTRGSA
Trigger: AGCAGAGCCACGAGTGTGAAGCATGCAACTGCCACGGCCATGCCAGCAACTGTTACTATGATCCAGATGTTGAGCGGCAGCAGGCAAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 90 bp TGTTCCGCAGTTCCCTCATCATGCGCTGGGCTTCAGCCCACTCTCTaGAAAAGTCACCTGAAGGCACGTTGTTTCCCTCTCCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: CSAVPSSCAGLQPTL*KSHLKARCFPLHLS
Trigger: GGACAGATGGAGAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGGGAACTGCGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586709.1
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp TCAAATTGGCTGGAGCACCTCCAAGGTGTAGTGGCTCTTGAGTGCTaGCAGGTGGGAAGGGGATCTGTCCAGCTGTGTAGCTACTGTCTG +
Preference number: 5 (lower is better)
Translates to: SNWLEHLQGVVALEC*QVGRGSVQLCSYCL
Trigger: CAGACAGTAGCTACACAGCTGGACAGATCCCCTTCCCACCTGCCAGCACTCAAGAGCCACTACACCTTGGAGGTGCTCCAGCCAATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTTCCGCCACCATACTGTaGCTGCCTGGGTTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVSATIL*LPGLKE
Trigger: CTCTTTCAACCCAGGCAGCAACAGTATGGTGGCGGA...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGCCAAAGGACTTGGCTaGGTAAGTGAGGTAACCACC +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAAKGLG*VSEVTT
Trigger: GGTGGTTACCTCACTTACCAAGCCAAGTCCTTTGGC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACCGCTGGCGTTTCTCTaGATCTCTTCCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAPLAFL*ISSSCF
Trigger: AAAGCAGCTGGAAGAGATCAAGAGAAACGCCAGCGG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCACCACGGTGGTCTGAATaGTCTGTCCAAAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAPRWSE*SVQRLG
Trigger: TCCCAACCTTTGGACAGACAATTCAGACCACCGTGG...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp ATTGCACACTTCTCACAGTTGTCTCCGTGGAAATTTGGCTTGCAGTaGCAGCGGCCTGAACCCTGTTCACAGCCATCCGCATGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: IAHFSQLSPWKFGLQ*QRPEPCSQPSACSG
Trigger: CCCTGAGCATGCGGATGGCTGTGAACAGGGTTCAGGCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 90 bp CCTCATCATGCGCTGGGCTTCAGCCCACTCTCTGGAAAAGTCACCTaGAGGCACGTTGTTTCCCTCTCCATCTGTCCCAGAGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: PHHALGFSPLSGKVT*RHVVSLSICPRDLL
Trigger: AAGCAGATCTCTGGGACAGATGGAGAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586709.1
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp AGACCCGGAGCTCTTCACATTCACATCAACCACAAACAGCTGAGCTaGCTCCGTGGAATACTCGACCACAACCACGTAGTGGCCAACCTG +
Preference number: 5 (lower is better)
Translates to: RPGALHIHINHKQLS*LRGILDHNHVVANL
Trigger: CAGGTTGGCCACTACGTGGTTGTGGTCGAGTATTCCACGGAGGCAGCTCAGCTGTTTGTGGTTGATGTGAATGTGAAGAGCTCCGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS GCA 90 bp CAGTCAGGGGATGACAGCTGCCCAGCTGGCCATTGCTGTTACAACTaGATGGTTGGCAGCTACCTCCGAATTTCTGGGGATTCCCGAAAT +
Preference number: 5 (lower is better)
Translates to: QSGDDSCPAGHCCYN*MVGSYLRISGDSRN
Trigger: ATTTCGGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGTCATCCCCTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS GCA 90 bp TTATGCAGTCTCCAGTCAGGGGATGACAGCTGCCCAGCTGGCCATTaGTGTTACAACTGCATGGTTGGCAGCTACCTCCGAATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LCSLQSGDDSCPAGH*CYNCMVGSYLRISG
Trigger: CCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGTCATCCCCTGACTGGAGACTGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 90 bp CAGGGGATGACAGCTGCCCAGCTGGCCATTGCTGTTACAACTGCATaGTTGGCAGCTACCTCCGAATTTCTGGGGATTCCCGAAATATCC +
Preference number: 5 (lower is better)
Translates to: QGMTAAQLAIAVTTA*LAATSEFLGIPEIS
Trigger: GGATATTTCGGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGTCATCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 90 bp AGGTGCTTTCCAAAGTTCCTGTTCCGCAGTTCCCTCATCATGCGCTaGGCTTCAGCCCACTCTCTGGAAAAGTCACCTGAAGGCACGTTG +
Preference number: 5 (lower is better)
Translates to: RCFPKFLFRSSLIMR*ASAHSLEKSPEGTL
Trigger: CAACGTGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGGGAACTGCGGAACAGGAACTTTGGAAAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586709.1
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp AAAGCTCTCTCGTTTTCTTGGTTCAAGCCATTTGCCTGCTTGGCTTaGGCAGCTGCCTCCTGCAGCCGAGCACGAAGGTCACTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: KALSFSWFKPFACLA*AAASCSRARRSLSL
Trigger: CAAACTCAGTGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCATTGTCTGTCCAAAGGTaGGGATGGGAGCATGTGGTT +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKALSVQR*GWEHVV
Trigger: AACCACATGCTCCCATCCCAACCTTTGGACAGACAA...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS GCA 90 bp AATGCAGACCCCTCCACCAGCATAGATGCCCTGGGTATTCAAGCTTaGCTGCTGCCGCTCAACATCTGGATCATAGTAACAGTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: NADPSTSIDALGIQA*LLPLNIWIIVTVAG
Trigger: GCCAGCAACTGTTACTATGATCCAGATGTTGAGCGGCAGCAGGCAAGCTTGAATACCCAGGGCATCTATGCTGGTGGAGGGGTCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 90 bp ACTGTTGCTGCCTGGGTTGAAAGAGACAGGGATGTCCACTCTGTCTaGTGTCTCCAGGTGCCAGCCCAGCATATCCACAAACTTAGTCCT +
Preference number: 5 (lower is better)
Translates to: TVAAWVERDRDVHSV*CLQVPAQHIHKLSP
Trigger: AGGACTAAGTTTGTGGATATGCTGGGCTGGCACCTGGAGACAGCAGACAGAGTGGACATCCCTGTCTCTTTCAACCCAGGCAGCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 90 bp TCTTGGTTCAAGCCATTTGCCTGCTTGGCTTGGGCAGCTGCCTCCTaGAGCCGAGCACGAAGGTCACTGAGTTTGGCTTCGTATTCATTT +
Preference number: 5 (lower is better)
Translates to: SWFKPFACLAWAAAS*SRARRSLSLASYSF
Trigger: AAATGAATACGAAGCCAAACTCAGTGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp TTGATCTCTTCCAGCTGCTTTGCCAGCTCTTGTAAGGACCGCGCGTaGTTTTCTGCCTCCTCCACAAGGGATGTTTTGCCAGCAGATCTG +
Preference number: 5 (lower is better)
Translates to: LISSSCFASSCKDRA*FSASSTRDVLPADL
Trigger: CAGATCTGCTGGCAAAACATCCCTTGTGGAGGAGGCAGAAAAGCACGCGCGGTCCTTACAAGAGCTGGCAAAGCAGCTGGAAGAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp CGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTGGTGGGTTTTCTaGCAGGTCCTTATCCGGTTCAGCATGTGCACATTCCGGATGACA +
Preference number: 5 (lower is better)
Translates to: RILLASPLFSPWWVF*QVLIRFSMCTFRMT
Trigger: TGTCATCCGGAATGTGCACATGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399516.7
ENST00000587184.5
CDS CCA 90 bp AGCTCTTCACATTCACATCAACCACAAACAGCTGAGCTGCCTCCGTaGAATACTCGACCACAACCACGTAGTGGCCAACCTGTGGGATGC +
Preference number: 5 (lower is better)
Translates to: SSSHSHQPQTAELPP*NTRPQPRSGQPVGC
Trigger: GCATCCCACAGGTTGGCCACTACGTGGTTGTGGTCGAGTATTCCACGGAGGCAGCTCAGCTGTTTGTGGTTGATGTGAATGTGAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS CCA 90 bp AAAGAATCCCGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTGGTaGGTTTTCTGCCAGGTCCTTATCCGGTTCAGCAAGAGCTGCGAC +
Preference number: 5 (lower is better)
Translates to: KESRILLASPLFSPW*VFCQVLIRFSKSCD
Trigger: GTCGCAGCTCTTGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCGGGATTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp CAGCAAGCCTCTATCCACGGTGGTCTGAATTGTCTGTCCAAAGGTTaGGATGGGAGCATGTGGTTGAGTTGGAACTCGAGCATAGCCCGT +
Preference number: 5 (lower is better)
Translates to: QQASIHGGLNCLSKG*DGSMWLSWNSSIAR
Trigger: ACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACATCCGTAGTGGCCTGTaGCACAGCGGGTGCACTGCC +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYIRSGL*HSGCTA
Trigger: GGCAGTGCACCCGCTGTGCAACAGGCCACTACGGAT...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCACCTGTGTACCCAGCTTaGCAGGAGCACCGCACGTCT +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAPVYPA*QEHRTS
Trigger: AGACGTGCGGTGCTCCTGCAAAGCTGGGTACACAGG...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGCAGTGGTTAGATACTaGGTGAAATCACTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAAVVRY*VKSLCR
Trigger: CCTGCAGAGTGATTTCACCAAGTATCTAACCACTGC...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCATCCTGCAACAGCTGGTaGATACGAAAAGTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKASCNSW*IRKVLV
Trigger: GACCAAGACTTTTCGTATCAACCAGCTGTTGCAGGA...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp GAAGAACCATGTCGCCAGGCAAGCCAAAGGACTTGGCTTGGTAAGTaGGGTAACCACCATATGAAGAAACCTTGTCCCCCAGGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: EEPCRQASQRTWLGK*GNHHMKKPCPPGRR
Trigger: CCTCCTACCTGGGGGACAAGGTTTCTTCATATGGTGGTTACCTCACTTACCAAGCCAAGTCCTTTGGCTTGCCTGGCGACATGGTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 90 bp ATCCAATTGCACACTTCTCACAGTTGTCTCCGTGGAAATTTGGCTTaGAGTGACAGCGGCCTGAACCCTGTTCACAGCCATCCGCATGCT +
Preference number: 5 (lower is better)
Translates to: IQLHTSHSCLRGNLA*SDSGLNPVHSHPHA
Trigger: AGCATGCGGATGGCTGTGAACAGGGTTCAGGCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTGCAATTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 90 bp CGCTGCTTGGTAAAAATGGATGACAAAGACGTATCGGCCCAGGTGTaGTACACGTCCTCTCAGGGTCACTTGATTCTGCGGTGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: RCLVKMDDKDVSAQV*YTSSQGHLILRCLQ
Trigger: TTGAAGGCACCGCAGAATCAAGTGACCCTGAGAGGACGTGTACCACACCTGGGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 90 bp AGCCTCTATCCACGGTGGTCTGAATTGTCTGTCCAAAGGTTGGGATaGGAGCATGTGGTTGAGTTGGAACTCGAGCATAGCCCGTACCTT +
Preference number: 5 (lower is better)
Translates to: SLYPRWSELSVQRLG*EHVVELELEHSPYL
Trigger: AAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp TGCGGGTCTCGTGCAGCACATGTTGACAAAGCTGACTTTGTTAACTaGACCAAAGAGATACCCTTCCCATGGGCAGGCCGTTCTCATCAG +
Preference number: 5 (lower is better)
Translates to: CGSRAAHVDKADFVN*TKEIPFPWAGRSHQ
Trigger: CTGATGAGAACGGCCTGCCCATGGGAAGGGTATCTCTTTGGTCCAGTTAACAAAGTCAGCTTTGTCAACATGTGCTGCACGAGACCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCCGGGGCCGCTCCCCTaGCTCCACGCGCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLPGPLP*LHALEA
Trigger: GGCTTCCAGCGCGTGGAGCAAGGGGAGCGGCCCCGG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCACTGGCAGCCCTGTaGGCTGCGTCCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDALAAL*AASSAA
Trigger: AGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCACTGGCAGCCCTGTaGGCTGCGTCCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEALAAL*AASSAA
Trigger: AGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS TCA 90 bp GGTTCAGCAAGAGCTGCGACTCCCTTTTATCAGCTTCTGCTTCTCTaGGGTGCTTTCCAAAGTTCCTGTTCCGCAGTTCCCTCATCATGC +
Preference number: 5 (lower is better)
Translates to: GSARAATPFYQLLLL*GAFQSSCSAVPSSC
Trigger: GCATGATGAGGGAACTGCGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCTTGCTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 90 bp AAACAGAAGCATACCAGAAGGAATCGGGCCATGTGTCCCTTGAGCTaGATGTCTGCATCTGCCAATAGCTCATACATGGCGATGCGGCTC +
Preference number: 5 (lower is better)
Translates to: KQKHTRRNRAMCPLS*MSASANSSYMAMRL
Trigger: GAGCCGCATCGCCATGTATGAGCTATTGGCAGATGCAGACATTCAGCTCAAGGGACACATGGCCCGATTCCTTCTGGTATGCTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591749.1
CDS TCA 90 bp GGGCAAAACAGAAGCATACCAGAAGGAATCGGGCCATGTGTCCCTTaGGCTGAATGTCTGCATCTGCCAATAGCTCATACATGGCGATGC +
Preference number: 5 (lower is better)
Translates to: GQNRSIPEGIGPCVP*AECLHLPIAHTWRC
Trigger: GCATCGCCATGTATGAGCTATTGGCAGATGCAGACATTCAGCTCAAGGGACACATGGCCCGATTCCTTCTGGTATGCTTCTGTTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591749.1
CDS GCA 90 bp CCGGCAGAGAACACTGTAGTTGCAGCTGTAAATGTTCACCTGGCCTaGCAGAACAGACCCGGAGCTCTTCACATTCACATCAACCACAAA +
Preference number: 5 (lower is better)
Translates to: PAENTVVAAVNVHLA*QNRPGALHIHINHK
Trigger: TTTGTGGTTGATGTGAATGTGAAGAGCTCCGGGTCTGTTCTGGCAGGCCAGGTGAACATTTACAGCTGCAACTACAGTGTTCTCTGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS GCA 90 bp CCTTATCCGGTTCAGCAAGAGCTGCGACTCCCTTTTATCAGCTTCTaGTTCTCTGAGGTGCTTTCCAAAGTTCCTGTTCCGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: PYPVQQELRLPFISF*FSEVLSKVPVPQFP
Trigger: AGGGAACTGCGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCTTGCTGAACCGGATAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp CACAGCTGTCGCAATCATCACATTCTTCTGCAGGGCTGCTATCTTTaGGTTCTTGGTTTATGCAGTCTCCAGTCAGGGGATGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: HSCRNHHILLQGCYL*VLGLCSLQSGDDSC
Trigger: GCAGCTGTCATCCCCTGACTGGAGACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTGCAGAAGAATGTGATGATTGCGACAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 90 bp TTTAAAGAATCCCGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTaGTGGGTTTTCTGCCAGGTCCTTATCCGGTTCAGCAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: FKESRILLASPLFSP*WVFCQVLIRFSKSC
Trigger: GCAGCTCTTGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCGGGATTCTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp AGCGATCCCCGTTTTCTGCAAAGAACAGCAAGCCTCTATCCACGGTaGTCTGAATTGTCTGTCCAAAGGTTGGGATGGGAGCATGTGGTT +
Preference number: 5 (lower is better)
Translates to: SDPRFLQRTASLYPR*SELSVQRLGWEHVV
Trigger: AACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTGTTCTTTGCAGAAAACGGGGATCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp AAAGAATCCCGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTGGTaGGTTTTCTGCCAGGTCCTTATCCGGTTCAGCATGTGCACATTC +
Preference number: 5 (lower is better)
Translates to: KESRILLASPLFSPW*VFCQVLIRFSMCTF
Trigger: GAATGTGCACATGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCGGGATTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399516.7
ENST00000587184.5
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACCTGGAACCTTCACAGTaGCGGCCACTTCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYLEPSQ*RPLQAL
Trigger: CAGAGCCTGAAGTGGCCGCAACTGTGAAGGTTCCAG...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCCCCTCCTGGAACAGTaGCAGCCTTCGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDPLLEQ*QPSQPA
Trigger: GGCCGGCTGCGAAGGCTGCAACTGTTCCAGGAGGGG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGAGCATGTGGTTGAGTaGGAACTCGAGCATAGCCCG +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAEHVVE*ELEHSP
Trigger: CGGGCTATGCTCGAGTTCCAACTCAACCACATGCTC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTTCTTCCGAGCACTTTTaGGTTACTCCCACAGTATCA +
Preference number: 5 (lower is better)
Translates to: GPRRENHRLSVDLPKAGVSSEHF*VTPTVS
Trigger: TGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAGA...AACACCTGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCAATTAGAAAAGGTGGTTaGTTTAAACTGCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKAIRKGG*FKLQPP
Trigger: GGGAGGCTGCAGTTTAAACAAACCACCTTTTCTAAT...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS CCA 90 bp CCATTGCTGTTACAACTGCATGGTTGGCAGCTACCTCCGAATTTCTaGGGATTCCCGAAATATCCCGGTGCACACCTTTCACACTGTGTT +
Preference number: 5 (lower is better)
Translates to: PLLLQLHGWQLPPNF*GFPKYPGAHLSHCV
Trigger: AACACAGTGTGAAAGGTGTGCACCGGGATATTTCGGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 90 bp TTTAAAGAATCCCGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTaGTGGGTTTTCTGCCAGGTCCTTATCCGGTTCAGCATGTGCACA +
Preference number: 5 (lower is better)
Translates to: FKESRILLASPLFSP*WVFCQVLIRFSMCT
Trigger: TGTGCACATGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCGGGATTCTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399516.7
ENST00000587184.5
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGCTCAGGGTGAGCCTTaGAGTCTCTGTGAAGTAGAG +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAAQGEP*SLCEVE
Trigger: CTCTACTTCACAGAGACTCAAAGGCTCACCCTGAGC...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTCCACAAGGGATGTTTaGCCAGCAGATCTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVSTRDV*PADLES
Trigger: ACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGGA...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp CATTCTTACAGAGCTGCGACTCCCTTTTATCAGCTTCTGCTTCTCTaGGGTGCTTTCCAAAGTTCCTGTTCCGCAGTTCCCTCATCATGC +
Preference number: 5 (lower is better)
Translates to: HSYRAATPFYQLLLL*GAFQSSCSAVPSSC
Trigger: GCATGATGAGGGAACTGCGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCTGTAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586709.1
CDS GCA 90 bp TTTGGGAGCATTCTTACAGAGCTGCGACTCCCTTTTATCAGCTTCTaGTTCTCTGAGGTGCTTTCCAAAGTTCCTGTTCCGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: FGSILTELRLPFISF*FSEVLSKVPVPQFP
Trigger: AGGGAACTGCGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCTGTAAGAATGCTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586709.1
CDS CCA 90 bp GCTTTTGAAGGTGAATTTCCTTGCTGTGAAATAGGCTTGGGTTACTaGTCAGGACAACCATTCAGACTGACAGGCCCCTGGACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: AFEGEFPCCEIGLGY*SGQPFRLTGPWTSK
Trigger: CTTGGAAGTCCAGGGGCCTGTCAGTCTGAATGGTTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCAAGGAAATTCACCTTCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp GACAAAGCTGACTTTGTTAACTGGACCAAAGAGATACCCTTCCCATaGGCAGGCCGTTCTCATCAGTTACCCACAAAGAGAGGATCACCT +
Preference number: 5 (lower is better)
Translates to: DKADFVNWTKEIPFP*AGRSHQLPTKRGSP
Trigger: AGGTGATCCTCTCTTTGTGGGTAACTGATGAGAACGGCCTGCCCATGGGAAGGGTATCTCTTTGGTCCAGTTAACAAAGTCAGCTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTGCCGCCCGATGACGTaGGGCTGGCATGGGCACTGC +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLCRPMT*GWHGHC
Trigger: GCAGTGCCCATGCCAGCCCAACGTCATCGGGCGGCA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATATCCGTAGTGGCCTGTaGCACAGCGGGTGCACTGCC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDIRSGL*HSGCTA
Trigger: GGCAGTGCACCCGCTGTGCAACAGGCCACTACGGAT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGACGCGCTGTGGATGGTaGCGGGCAGCTCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPETRCGW*RAAPGD
Trigger: ATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATCACCTGAAGGCACGTaGTTTCCCTCTCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSSPEGT*FPSPSV
Trigger: GACAGATGGAGAGGGAAACAACGTGCCTTCAGGTGA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAATTTGCCTGCTTGGCTaGGGCAGCTGCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSICLLG*GSCLLQ
Trigger: CTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAAT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AGATTCAGTGAGGTTAACACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGCCATTTTCTCTTGAGTaGGGCCTTTGGAGAAACAAG +
Preference number: 5 (lower is better)
Translates to: RFSEVNTGDPEERTTGLVPFSLE*GLWRNK
Trigger: CTTGTTTCTCCAAAGGCCCAACTCAAGAGAAAATGG...CACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTGTTAACCTCACTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CACTGGGGACCCAGAAGAGAGAACCACCGGCTTAGTGTAGACCTGCCAAAGGCATTGATACGAAAAGTCTaGGTCTTGTTAAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: HWGPRRENHRLSVDLPKALIRKV*VLLNLV
Trigger: TACCAGGTTTAACAAGACCAAGACTTTTCGTATCAA...TGCCTTTGGCAGGTCTACACTAAGCCGGTGGTTCTCTCTTCTGGGTCCCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAAAGACACCCCGAAGCTaGAAGAAGGGGTATACAAGG +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAKTPRS*KKGYTR
Trigger: CCTTGTATACCCCTTCTTCAAGCTTCGGGGTGTCTT...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACTGGGGAAGGCTAGGATaGGGAAACCAATGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYWGRLG*GNQWAS
Trigger: TGAAGCCCATTGGTTTCCCAATCCTAGCCTTCCCCA...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS GCA 90 bp ATATGCCTGAGCCATCCTGGCATTGATTTGAATGTCCGTTGCAATTaGAGGGAACACACCGTCCGGTATACAAGCCTTTATGATCCCGAT +
Preference number: 5 (lower is better)
Translates to: ICLSHPGIDLNVRCN*REHTVRYTSLYDPD
Trigger: ATCGGGATCATAAAGGCTTGTATACCGGACGGTGTGTTCCCTGCAATTGCAACGGACATTCAAATCAATGCCAGGATGGCTCAGGCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000649721.1
CDS CCA 90 bp CACGGTGGTCTGAATTGTCTGTCCAAAGGTTGGGATGGGAGCATGTaGTTGAGTTGGAACTCGAGCATAGCCCGTACCTTCAAAATAATT +
Preference number: 5 (lower is better)
Translates to: HGGLNCLSKGWDGSM*LSWNSSIARTFKII
Trigger: AATTATTTTGAAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp CCTGCAGGTTCCTTGTCCATGTCTGATGATCTAATAATATGCCACTaGGTTGAAAGGTCTGAAATCCAAATGAGGCCTGGAGGTGGTCAG +
Preference number: 5 (lower is better)
Translates to: PAGSLSMSDDLIICH*VERSEIQMRPGGGQ
Trigger: CTGACCACCTCCAGGCCTCATTTGGATTTCAGACCTTTCAACCCAGTGGCATATTATTAGATCATCAGACATGGACAAGGAACCTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588164.2
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp AGGCCGTTCTCATCAGTTACCCACAAAGAGAGGATCACCTACCTCTaGACAAAAACATTGCTAATACAACCCTCAAAATTGCTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: RPFSSVTHKERITYL*TKTLLIQPSKLLPP
Trigger: GGGCGGGAGCAATTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAGGTAGGTGATCCTCTCTTTGTGGGTAACTGATGAGAACGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGGACAGGGGAGGGCTTaGCCACCAACGTTCAGATCC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDGQGRA*PPTFRS
Trigger: GGATCTGAACGTTGGTGGCAAAGCCCTCCCCTGTCC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCATGGCCGTGGCAGTaGCATGCTTCACACTCGTGG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEAWPWQ*HASHSW
Trigger: CCACGAGTGTGAAGCATGCAACTGCCACGGCCATGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCCTTCGGCAATCACTaGATCCCGGCAGCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSAFGNH*IPAAKH
Trigger: GTGCTTGGCTGCCGGGATCAAGTGATTGCCGAAGGC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCTGTGATTCTGGGCTaGCATCTGCACTGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPVILG*HLHCPL
Trigger: CAGCGGGCAGTGCAGATGCAAGCCCAGAATCACAGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCTGTGTACCCAGCTTaGCAGGAGCACCGCACGTCT +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPVYPA*QEHRTS
Trigger: AGACGTGCGGTGCTCCTGCAAAGCTGGGTACACAGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCATCACATCCAGTTCTTTaGCGCTTTGTGTTGCCCGAT +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLASHPVL*RFVLPD
Trigger: ATCGGGCAACACAAAGCGCAAAAGAACTGGATGTGA...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATATTTGCCTGCTTGGCTaGGGCAGCTGCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDICLLG*GSCLLQ
Trigger: CTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAAT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCATTTGCCTGCTTGGCTaGGGCAGCTGCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSICLLG*GSCLLQ
Trigger: CTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAAT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACAATCTTCCAGGTCATTaGGCAGTCGGACTTCGACTC +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYNLPGH*AVGLRL
Trigger: GAGTCGAAGTCCGACTGCCAAATGACCTGGAAGATT...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACGAATGGTCTCTGCCGTaGTTTATGGCGTCTCCAACT +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYEWSLP*FMASPT
Trigger: AGTTGGAGACGCCATAAACAACGGCAGAGACCATTC...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATACACCTTCACGCTCCTaGGGGAGGCCACTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDTPSRS*GRPLVC
Trigger: ACACACCAGTGGCCTCCCCAAGGAGCGTGAAGGTGT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp TACTGCAGTGCTCCATCTGCTGTTTCAAGGAACTCTGACTTCCAGTCCCATTTAAGAGCAGTGAGTTCATaGCATCGCACCTGTAGTTGC +
Preference number: 5 (lower is better)
Translates to: YCSAPSAVSRNSDFQSHLRAVSS*HRTCSC
Trigger: GCAACTACAGGTGCGATGCAATGAACTCACTGCTCT...TAAATGGGACTGGAAGTCAGAGTTCCTTGAAACAGCAGATGGAGCACTGCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CAA 90 bp AGTAATACAATGTTCAAGGCCATGGCCAAGAACTGGATGGGTTTACTGCAGTGCCAGGGAAGATGTCCATaGCTTCAGGTCATCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SNTMFKAMAKNWMGLLQCQGRCP*LQVILG
Trigger: ACCCAAGATGACCTGAAGCAATGGACATCTTCCCTG...GCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACCATCATAATCTAGACTaGGTTGGTAGCAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYHHNLD*VGSRLG
Trigger: CCCCAGCCTGCTACCAACCAAGTCTAGATTATGATG...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTAAATGGATGATCCTCTaGCAGACTCAGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: CVTSISASLPGSLCPQGIKWMIL*QTQFLA
Trigger: AGCCAGGAACTGAGTCTGCAAGAGGATCATCCATTT...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp GAAACAGCTGGTACAACCCTTGAGATTGGCTGGGTCCAAATGGAATaGGCCTTCTCGACACACATTACACTCTGTGCCTTCTACATTTTC +
Preference number: 5 (lower is better)
Translates to: ETAGTTLEIGWVQME*AFSTHITLCAFYIF
Trigger: GAAAATGTAGAAGGCACAGAGTGTAATGTGTGTCGAGAAGGCTCATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 90 bp GGTGCTGGCATTCACACCGAAACAGTTTTTCAGGATTGTTTATATTaGACACTTCAGCATGGCCATTGCAAACACACTGCCCACCAATGC +
Preference number: 5 (lower is better)
Translates to: GAGIHTETVFQDCLY*TLQHGHCKHTAHQC
Trigger: GCATTGGTGGGCAGTGTGTTTGCAATGGCCATGCTGAAGTGTGCAATATAAACAATCCTGAAAAACTGTTTCGGTGTGAATGCCAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 90 bp AAACAGAAACAGCTGGTACAACCCTTGAGATTGGCTGGGTCCAAATaGAATGAGCCTTCTCGACACACATTACACTCTGTGCCTTCTACA +
Preference number: 5 (lower is better)
Translates to: KQKQLVQPLRLAGSK*NEPSRHTLHSVPST
Trigger: TGTAGAAGGCACAGAGTGTAATGTGTGTCGAGAAGGCTCATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCTGTTTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGATCTCGCTGGGCTTaGGAGATGAGGTGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGSRWA*EMRCPR
Trigger: TCTTGGACACCTCATCTCCAAAGCCCAGCGAGATCC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCACCAAAATTAATGCTGTaGGAGGAGTTTCATGGGCCA +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLAPKLML*EEFHGP
Trigger: TGGCCCATGAAACTCCTCCAACAGCATTAATTTTGG...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTGGAACCTTCACAGTaGCGGCCACTTCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLEPSQ*RPLQAL
Trigger: CAGAGCCTGAAGTGGCCGCAACTGTGAAGGTTCCAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCTTCTACATTTTCCTaGCAGAGGCAAGCCCCGGTC +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPSTFS*QRQAPV
Trigger: GACCGGGGCTTGCCTCTGCAAGGAAAATGTAGAAGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCCGCCACCATACTGTaGCTGCCTGGGTTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSATIL*LPGLKE
Trigger: CTCTTTCAACCCAGGCAGCAACAGTATGGTGGCGGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCTGTGTACCCAGCTTaGCAGGAGCACCGCACGTCT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPVYPA*QEHRTS
Trigger: AGACGTGCGGTGCTCCTGCAAAGCTGGGTACACAGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGCGTCCTCGGCCGCTTaGATGGCATTGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEASSAA*MALRMF
Trigger: GAACATCCTCAATGCCATCAAAGCGGCCGAGGACGC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCGTCCTCGGCCGCTTaGATGGCATTGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEASSAA*MALRMF
Trigger: GAACATCCTCAATGCCATCAAAGCGGCCGAGGACGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATGTTCAAGGCCATGGCCAAGAACTGGATGGGTTTACTGCAGTGCTCCATCTGTGTCAGTTAGTGCTCTaGGAAGAGAAGAACTTCATC +
Preference number: 5 (lower is better)
Translates to: NVQGHGQELDGFTAVLHLCQLVL*EEKNFI
Trigger: GATGAAGTTCTTCTCTTCCAAGAGCACTAACTGACA...CAGATGGAGCACTGCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTCAGTGTCGTCAAATaGGCTGCCACCGAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELSVVK*AATECH
Trigger: GTGGCACTCGGTGGCAGCCAATTTGACGACACTGAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588004.1
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCACTGACTTTGGTTAGCTaGCCATATGAAGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLALTLVS*PYEASV
Trigger: CACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAG...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS GCA 90 bp CAGAACCTCATCTGTGATGTCGTTGGCCTTTCTGACCATGCTCTTTaGACTACTGATCATAGCATCAATATCACCTCTCTGTATCCCATG +
Preference number: 5 (lower is better)
Translates to: QNLICDVVGLSDHAL*TTDHSINITSLYPM
Trigger: CATGGGATACAGAGAGGTGATATTGATGCTATGATCAGTAGTGCAAAGAGCATGGTCAGAAAGGCCAACGACATCACAGATGAGGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS GCA 90 bp AGGGAGGTGCATTGGGTAATCAGTGCTTTTGAAGGTGAATTTCCTTaGTGTGAAATAGGCTTGGGTTACTGGTCAGGACAACCATTCAGA +
Preference number: 5 (lower is better)
Translates to: REVHWVISAFEGEFP*CEIGLGYWSGQPFR
Trigger: TCTGAATGGTTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCAAGGAAATTCACCTTCAAAAGCACTGATTACCCAATGCACCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACCTGGGTATTCAAGCTaGCCTGCTGCCGCTCAACAT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEPGYSS*PAAAQH
Trigger: ATGTTGAGCGGCAGCAGGCAAGCTTGAATACCCAGG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTGTCTCCGTGGAAATTaGGCTTGCAGTGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPECLRGN*ACSDSG
Trigger: GCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCACTGCCACGGGTCTaGGCTCCCCATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSLPRV*APHQAG
Trigger: TCCTGCTTGATGGGGAGCCAAGACCCGTGGCAGTGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCCTCTCAGGGTCACTaGATTCTGCGGTGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSSQGH*ILRCLQ
Trigger: TTGAAGGCACCGCAGAATCAAGTGACCCTGAGAGGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTGTGAAGTAGAGGCCTaGGATGCGCACATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDCEVEA*DAHICQ
Trigger: CTGGCAGATGTGCGCATCCAAGGCCTCTACTTCACA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTGTTAGCAAGCCCATaGTTCTCCCCCTGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLLASP*FSPWWV
Trigger: AACCCACCAGGGGGAGAACAATGGGCTTGCTAACAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTGTTAGCAAGCCCATaGTTCTCCCCCTGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLLASP*FSPWWV
Trigger: AACCCACCAGGGGGAGAACAATGGGCTTGCTAACAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCTGTTAGCAAGCCCATaGTTCTCCCCCTGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELLASP*FSPWWV
Trigger: AACCCACCAGGGGGAGAACAATGGGCTTGCTAACAG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCTGTCTGGATGGGGTaGAGCCCATCCAGAACCTCA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSVWMG*SPSRTS
Trigger: TGAGGTTCTGGATGGGCTCAACCCCATCCAGACAGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCAAGATCTGGTCCACTaGGAGTTCAGCCTCACGGTC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDQDLVH*EFSLTV
Trigger: GACCGTGAGGCTGAACTCCAAGTGGACCAGATCTTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGAGCATGTGGTTGAGTaGGAACTCGAGCATAGCCCG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEEHVVE*ELEHSP
Trigger: CGGGCTATGCTCGAGTTCCAACTCAACCACATGCTC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGAGCATGTGGTTGAGTaGGAACTCGAGCATAGCCCG +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEEHVVE*ELEHSP
Trigger: CGGGCTATGCTCGAGTTCCAACTCAACCACATGCTC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACAGGGACACATCTCTCTaGAGAGAGTTACTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYRDTSL*RELLVK
Trigger: TTTGACCAGTAACTCTCTCAAGAGAGATGTGTCCCT...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGACACCTTCACGCTCCTaGGGGAGGCCACTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLTPSRS*GRPLVC
Trigger: ACACACCAGTGGCCTCCCCAAGGAGCGTGAAGGTGT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTGTGGGGAGGCTCTTaGGTTTCCCTGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSELWGGS*VSLMEV
Trigger: CACCTCCATCAGGGAAACCAAAGAGCCTCCCCACAA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTTGTGGGGAGGCTCTTaGGTTTCCCTGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLWGGS*VSLMEV
Trigger: CACCTCCATCAGGGAAACCAAAGAGCCTCCCCACAA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTCAGTGTCGTCAAATaGGCTGGAGCACCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLSVVK*AGAPPR
Trigger: CCTTGGAGGTGCTCCAGCCAATTTGACGACACTGAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS GCA 90 bp CCTTGCAAACTGATAAATTCTCTGAAATTTCACCCGATCCATAACTaGCTCCTTAGTCTCACTCTTGGTCAAGATCTGGTCCACTTGGAG +
Preference number: 5 (lower is better)
Translates to: PCKLINSLKFHPIHN*LLSLTLGQDLVHLE
Trigger: CTCCAAGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGAGGCAGTTATGGATCGGGTGAAATTTCAGAGAATTTATCAGTTTGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 90 bp ACCATGAGGCCTTCCACCTATAACGGGGAACTCTACATTGCACTCTaGACGTTGTGTTTCAAATCAATTAGAATGGACTGGATGCAAGAA +
Preference number: 5 (lower is better)
Translates to: TMRPSTYNGELYIAL*TLCFKSIRMDWMQE
Trigger: TTCTTGCATCCAGTCCATTCTAATTGATTTGAAACACAACGTGCAGAGTGCAATGTAGAGTTCCCCGTTATAGGTGGAAGGCCTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586709.1
CDS CCA 90 bp CGTGCTTTTCTGCCTCCTCCACAAGGGATGTTTTGCCAGCAGATCTaGAAAGTTCTCTTACTTTGTCACTTAGTTCTTGTCTTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: RAFLPPPQGMFCQQI*KVLLLCHLVLVLLH
Trigger: ATGAAGCAAGACAAGAACTAAGTGACAAAGTAAGAGAACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGGAGGAGGCAGAAAAGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGTGAGGTTGACTCTGTaGTACTGTGTGCCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSVRLTL*YCVPED
Trigger: GTCCTCAGGCACACAGTACAACAGAGTCAACCTCAC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCACTTCAGCATGGCCATaGCAAACACACTGCCCACCA +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSTSAWP*QTHCPP
Trigger: TGGTGGGCAGTGTGTTTGCAATGGCCATGCTGAAGT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATAGCACTGCTGGAACCTaGGCAGTGGGGGAAATCATA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSTAGT*AVGEII
Trigger: TATGATTTCCCCCACTGCCAAGGTTCCAGCAGTGCT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCCGCCTTATGGCACTaGCATTCTGAACATCCACTG +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPALWH*HSEHPL
Trigger: CAGTGGATGTTCAGAATGCAAGTGCCATAAGGCGGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGATGATCTCTTTGCTTaGAGCAGCACCCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEDDLFA*SSTPGW
Trigger: CCATCCTGGGGTGCTGCTCAAAGCAAAGAGATCATC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGGCAATGCAGTGGACTaGTGGTCTCACATACTCAGC +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEGNAVD*WSHILS
Trigger: GCTGAGTATGTGAGACCACAAGTCCACTGCATTGCC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCCTCTCAGGGTCACTaGATTCTGCGGTGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESSQGH*ILRCLQ
Trigger: TTGAAGGCACCGCAGAATCAAGTGACCCTGAGAGGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCTTCTACATTTTCCTaGCAGAGGCAAGCCCCGGTC +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPSTFS*QRQAPV
Trigger: GACCGGGGCTTGCCTCTGCAAGGAAAATGTAGAAGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGCCAAAGGACTTGGCTaGGTAAGTGAGGTAACCACC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDAKGLG*VSEVTT
Trigger: GGTGGTTACCTCACTTACCAAGCCAAGTCCTTTGGC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTGTGAAGTAGAGGCCTaGGATGCGCACATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPCEVEA*DAHICQ
Trigger: CTGGCAGATGTGCGCATCCAAGGCCTCTACTTCACA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGCTCAGGGTGAGCCTTaGAGTCTCTGTGAAGTAGAG +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEAQGEP*SLCEVE
Trigger: CTCTACTTCACAGAGACTCAAAGGCTCACCCTGAGC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCACCTGAAGGCACGTaGTTTCCCTCTCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSPEGT*FPSPSV
Trigger: GACAGATGGAGAGGGAAACAACGTGCCTTCAGGTGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATCACCTGAAGGCACGTaGTTTCCCTCTCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESPEGT*FPSPSV
Trigger: GACAGATGGAGAGGGAAACAACGTGCCTTCAGGTGA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTTGGTTCAAGCCATTaGCCTGCTTGGCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLGSSH*PAWLGQ
Trigger: CTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGCGTCCTCGGCCGCTTaGATGGCATTGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCASSAA*MALRMF
Trigger: GAACATCCTCAATGCCATCAAAGCGGCCGAGGACGC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTAACAGTTTATCACTGTaGGAACTCAGGGTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: CVTSISASLPGSLCPQGINSLSL*ELRVLA
Trigger: AGCTAAAACCCTGAGTTCCAACAGTGATAAACTGTT...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CGGCTTAGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCATTGATACTTTCAATCTaGCGCCAAAGATCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: RLSVDLPKAGVKMDDPLALILSI*RQRSGS
Trigger: ACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAA...TGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACTAAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAAGATCTGGTCCACTaGGAGTTCAGCCTCACGGTC +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPQDLVH*EFSLTV
Trigger: GACCGTGAGGCTGAACTCCAAGTGGACCAGATCTTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCCAAGATCTGGTCCACTaGGAGTTCAGCCTCACGGTC +
Preference number: 5 (lower is better)
Translates to: SSDEQILCRGYGNACVAFQDLVH*EFSLTV
Trigger: GACCGTGAGGCTGAACTCCAAGTGGACCAGATCTTG...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCCACGGTGGTCTGAATaGTCTGTCCAAAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEPRWSE*SVQRLG
Trigger: TCCCAACCTTTGGACAGACAATTCAGACCACCGTGG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATATACAACCCTCAAAATaGCTCCCGCCCAGACGCAGA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDIQPSK*LPPRRR
Trigger: TCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTAT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCACGAAAAGTCTTGGTCTaGTTAAACCTGGTAGAACCT +
Preference number: 5 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSRKVLV*LNLVEP
Trigger: AGGTTCTACCAGGTTTAACAAGACCAAGACTTTTCG...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACAGGTGCAGGATGTGTaGTTTTATGGTGACTGCCAC +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSQVQDV*FYGDCH
Trigger: GTGGCAGTCACCATAAAACAACACATCCTGCACCTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCTCAGTGTCGTCAAATaGGCTGGAGCACCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPLSVVK*AGAPPR
Trigger: CCTTGGAGGTGCTCCAGCCAATTTGACGACACTGAG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAATAACTCGCTTGCAGTaGACTTTGACCGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEITRLQ*TLTGRL
Trigger: CAGCCTCCCGGTCAAAGTCAACTGCAAGCGAGTTAT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCTCCACATAACTCGCTaGCAGTTGACTTTGACCGGG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLHITR*QLTLTG
Trigger: CCCGGTCAAAGTCAACTGCAAGCGAGTTATGTGGAG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR CAA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGAACTGGTCTCGAACTCTaGGCCTCAAGCAACCCTCTT +
Preference number: 5 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRTGLEL*ASSNPL
Trigger: AAGAGGGTTGCTTGAGGCCAAGAGTTCGAGACCAGT...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS TCA 90 bp TTCCAATATAACAGTTTGCAGCGGCTACAAGTAGGACCTTCAACATaGAGCTTGCATTGGCAATACCCCAAATTGGAGTTGATGGTACCA +
Preference number: 5 (lower is better)
Translates to: FQYNSLQRLQVGPST*SLHWQYPKLELMVP
Trigger: TGGTACCATCAACTCCAATTTGGGGTATTGCCAATGCAAGCTTCATGTTGAAGGTCCTACTTGTAGCCGCTGCAAACTGTTATATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS TCA 90 bp AGACCATCTCGGAGAGTTGTGAGATTGGTGTCTATCACTTCTTTCTaGACTGTCACAATATTCAGGGTTTGCTGTAGGTTGTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RPSRRVVRLVSITSF*TVTIFRVCCRLLRA
Trigger: AGCTCTCAACAACCTACAGCAAACCCTGAATATTGTGACAGTTCAGAAAGAAGTGATAGACACCAATCTCACAACTCTCCGAGATGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS CCA 90 bp AAACAAGGACAGAGATGTATATCCTTTCAAATCTTCCAGGTCATTTaGCAGTCGGACTTCGACTCCAGATTTACCATTGAACCTCATGGG +
Preference number: 5 (lower is better)
Translates to: KQGQRCISFQIFQVI*QSDFDSRFTIEPHG
Trigger: CCCATGAGGTTCAATGGTAAATCTGGAGTCGAAGTCCGACTGCCAAATGACCTGGAAGATTTGAAAGGATATACATCTCTGTCCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 90 bp CGGGAACTTGAAATGTGTTTTAGCCTTTTGCTATTTCTCAGAAGCTaGTCATCGATGAGAAGCCGTAGTCCAGAGTTGTCGCTTATTACA +
Preference number: 5 (lower is better)
Translates to: RELEMCFSLLLFLRS*SSMRSRSPELSLIT
Trigger: TGTAATAAGCGACAACTCTGGACTACGGCTTCTCATCGATGACCAGCTTCTGAGAAATAGCAAAAGGCTAAAACACATTTCAAGTTCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000592442.1
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCGTCGGGTGCGCTGCTaGGTAAAAATGGATGACAAA +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRRVRC*VKMDDK
Trigger: TTTGTCATCCATTTTTACCAAGCAGCGCACCCGACG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTTGGTTCAAGCCATTaGCCTGCTTGGCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLGSSH*PAWLGQ
Trigger: CTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCGCTGGCGTTTCTCTaGATCTCTTCCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPPLAFL*ISSSCF
Trigger: AAAGCAGCTGGAAGAGATCAAGAGAAACGCCAGCGG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGGGTTTGCTGTAGGTaGTTGAGAGCTGGACTGACT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRVCCR*LRAGLT
Trigger: AGTCAGTCCAGCTCTCAACAACCTACAGCAAACCCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCATCTGTGATGTCGTaGGCCTTTCTGACCATGCTC +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESSVMS*AFLTML
Trigger: GAGCATGGTCAGAAAGGCCAACGACATCACAGATGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGTCTGGATGGGGTaGAGCCCATCCAGAACCTCA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSVWMG*SPSRTS
Trigger: TGAGGTTCTGGATGGGCTCAACCCCATCCAGACAGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGATGGGAGCATGTGGTaGAGTTGGAACTCGAGCATA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDDGSMW*SWNSSI
Trigger: TATGCTCGAGTTCCAACTCAACCACATGCTCCCATC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGATGGGAGCATGTGGTaGAGTTGGAACTCGAGCATA +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEDGSMW*SWNSSI
Trigger: TATGCTCGAGTTCCAACTCAACCACATGCTCCCATC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTTGTCTGTCCAAAGGTaGGGATGGGAGCATGTGGTT +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPELSVQR*GWEHVV
Trigger: AACCACATGCTCCCATCCCAACCTTTGGACAGACAA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGAATGGTCTCTGCCGTaGTTTATGGCGTCTCCAACT +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDEWSLP*FMASPT
Trigger: AGTTGGAGACGCCATAAACAACGGCAGAGACCATTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCCTGCAACAGCTGGTaGATACGAAAAGTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSCNSW*IRKVLV
Trigger: GACCAAGACTTTTCGTATCAACCAGCTGTTGCAGGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTTGTGGGGAGGCTCTTaGGTTTCCCTGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLWGGS*VSLMEV
Trigger: CACCTCCATCAGGGAAACCAAAGAGCCTCCCCACAA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAATCCCACAAAGCTGTTaGTGGGGAGGCTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEIPQSC*WGGSLV
Trigger: AACCAAAGAGCCTCCCCACAAACAGCTTTGTGGGAT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAAGACACCCCGAAGCTaGAAGAAGGGGTATACAAGG +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEKTPRS*KKGYTR
Trigger: CCTTGTATACCCCTTCTTCAAGCTTCGGGGTGTCTT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCAGGTGCAGGATGTGTaGTTTTATGGTGACTGCCAC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDQVQDV*FYGDCH
Trigger: GTGGCAGTCACCATAAAACAACACATCCTGCACCTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTCAGTGTCGTCAAATaGGCTGGAGCACCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLSVVK*AGAPPR
Trigger: CCTTGGAGGTGCTCCAGCCAATTTGACGACACTGAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GATGGAGAGAAAACAGTTAAGCCAATGTTTTACCTTATGGCAAAGATGGTGAAATCTCAACCTGCACCTTaGGTTTCCCTGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: DGEKTVKPMFYLMAKMVKSQPAP*VSLMEV
Trigger: CACCTCCATCAGGGAAACCAAAGGTGCAGGTTGAGA...TTTCACCATCTTTGCCATAAGGTAAAACATTGGCTTAACTGTTTTCTCTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590104.1
CDS-3UTR CAA 90 bp TGCGTTACATCCATCTCAGCTTCCCTACCAGGTAGTTTGTGCCCTCAAGGAATTAGATCAGGTAGTTTGTaGGTTAACTTATTCACTTGC +
Preference number: 5 (lower is better)
Translates to: CVTSISASLPGSLCPQGIRSGSL*VNLFTC
Trigger: GCAAGTGAATAAGTTAACCAACAAACTACCTGATCT...AATTCCTTGAGGGCACAAACTACCTGGTAGGGAAGCTGAGATGGATGTAACGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp CCCATAACTGGCAATGCAGTGGACTTGTGGTCTCACATACTCAGCTaGGAATTCTTCAATAGGTATGATACAAACTTGATGCAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PITGNAVDLWSHILS*EFFNRYDTNLMQKE
Trigger: TTCCTTCTGCATCAAGTTTGTATCATACCTATTGAAGAATTCTCAGCTGAGTATGTGAGACCACAAGTCCACTGCATTGCCAGTTATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS GCA 90 bp TTGAGCAGCACCCCAGGATGGATAAATAGTTATATGGCCAGATACTaGTTCAGTTCCAGGGTTAACGTATCTCAGAATAACACGAAACAA +
Preference number: 5 (lower is better)
Translates to: LSSTPGWINSYMARY*FSSRVNVSQNNTKQ
Trigger: TTGTTTCGTGTTATTCTGAGATACGTTAACCCTGGAACTGAAGCAGTATCTGGCCATATAACTATTTATCCATCCTGGGGTGCTGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS GCA 90 bp TTGCACTCTGCACGTTGTGTTTCAAATCAATTAGAATGGACTGGATaGAAGAATTTGGGAGCATTCTTACAGAGCTGCGACTCCCTTTTA +
Preference number: 5 (lower is better)
Translates to: LHSARCVSNQLEWTG*KNLGAFLQSCDSLL
Trigger: TAAAAGGGAGTCGCAGCTCTGTAAGAATGCTCCCAAATTCTTGCATCCAGTCCATTCTAATTGATTTGAAACACAACGTGCAGAGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586709.1
CDS CCA 90 bp TGTATTGCTATTTCTACCATCCATGTCATAGACTCCGGGTGTTTCTaGTTTACTGGATGTGGCTCCTTTGGTGTAATTAAGCCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: CIAISTIHVIDSGCF*FTGCGSFGVIKPCK
Trigger: TTTGCAAGGCTTAATTACACCAAAGGAGCCACATCCAGTAAACCAGAAACACCCGGAGTCTATGACATGGATGGTAGAAATAGCAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGATCCATCGATGGCATaGGTGACAGGATGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPDPSMA*VTGCAF
Trigger: GAAAGCACATCCTGTCACCAATGCCATCGATGGATC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGATCCAAGGTGAGGTaGACTCTGTTGTACTGTGTG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRSKVR*TLLYCV
Trigger: CACACAGTACAACAGAGTCAACCTCACCTTGGATCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGCGGATGTTTGTTGCCTaGGTAAACTCCCTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLRMFVA*VNSLRV
Trigger: CACCCTGAGGGAGTTTACCAAGGCAACAAACATCCG...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTGGCAATACCCCAAATaGGAGTTGATGGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEWQYPK*ELMVPA
Trigger: AGCTGGTACCATCAACTCCAATTTGGGGTATTGCCA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGCAATGCAGTGGACTaGTGGTCTCACATACTCAGC +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGNAVD*WSHILS
Trigger: GCTGAGTATGTGAGACCACAAGTCCACTGCATTGCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGACACAGGTGGCACTTaGATTGACAAATCGCCCATA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDDTGGT*IDKSPI
Trigger: TATGGGCGATTTGTCAATCAAAGTGCCACCTGTGTC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCGTCGGGTGCGCTGCTaGGTAAAAATGGATGACAAA +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPRRVRC*VKMDDK
Trigger: TTTGTCATCCATTTTTACCAAGCAGCGCACCCGACG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTACAACCCTTGAGATaGGCTGGGTCCAAATGGAAT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVQPLR*AGSKWN
Trigger: ATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATGTTACAACTGCATGGTaGGCAGCTACCTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDVTTAW*AATSEF
Trigger: AAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAAC...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGGTTACAACTGCATGGTaGGCAGCTACCTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEVTTAW*AATSEF
Trigger: AAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAAC...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AGTGTAGACCTGCCAAAGGCAGGTGTTAAAATGGATGATCCTCTTGCAGACTCATTTTTGATCCATGATTaGAAATGGCAGAACGGTAGT +
Preference number: 5 (lower is better)
Translates to: SVDLPKAGVKMDDPLADSFLIHD*KWQNGS
Trigger: ACTACCGTTCTGCCATTTCAAATCATGGATCAAAAA...TGAGTCTGCAAGAGGATCATCCATTTTAACACCTGCCTTTGGCAGGTCTACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCACATCCAGTTCTTTaGCGCTTTGTGTTGCCCGAT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSHPVL*RFVLPD
Trigger: ATCGGGCAACACAAAGCGCAAAAGAACTGGATGTGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATCACATCCAGTTCTTTaGCGCTTTGTGTTGCCCGAT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESHPVL*RFVLPD
Trigger: ATCGGGCAACACAAAGCGCAAAAGAACTGGATGTGA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAGCTGCAGCGCAATGTaGGTTTGCAACAAAGATGAG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESCSAM*VCNKDE
Trigger: CTCATCTTTGTTGCAAACCAACATTGCGCTGCAGCT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGAGCTGCAGCGCAATGTaGGTTTGCAACAAAGATGAG +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESCSAM*VCNKDE
Trigger: CTCATCTTTGTTGCAAACCAACATTGCGCTGCAGCT...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCTGCAGCGCAATGTaGGTTTGCAACAAAGATGAG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSCSAM*VCNKDE
Trigger: CTCATCTTTGTTGCAAACCAACATTGCGCTGCAGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCCACAAGGGATGTTTaGCCAGCAGATCTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSTRDV*PADLES
Trigger: ACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCTGGCGTTTCTCTaGATCTCTTCCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCPLAFL*ISSSCF
Trigger: AAAGCAGCTGGAAGAGATCAAGAGAAACGCCAGCGG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAGTTTGCTGTAGGTTGTaGAGAGCTGGACTGACTTCT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEVCCRL*RAGLTS
Trigger: AGAAGTCAGTCCAGCTCTCAACAACCTACAGCAAAC...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAGGGTTTGCTGTAGGTaGTTGAGAGCTGGACTGACT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPRVCCR*LRAGLT
Trigger: AGTCAGTCCAGCTCTCAACAACCTACAGCAAACCCT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCATCTGTGATGTCGTaGGCCTTTCTGACCATGCTC +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSSVMS*AFLTML
Trigger: GAGCATGGTCAGAAAGGCCAACGACATCACAGATGA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGGCAACAGCTGTTGGTaGATACTTTCAATCTTGCGC +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSGNSCW*ILSILR
Trigger: GCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACGTATTCTGTCCATGTaGTCAGAGATGTTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSRILSM*SEMFPK
Trigger: CTTGGGAAACATCTCTGACAACATGGACAGAATACG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAATCTTCCAGGTCATTaGGCAGTCGGACTTCGACTC +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPNLPGH*AVGLRL
Trigger: GAGTCGAAGTCCGACTGCCAAATGACCTGGAAGATT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCATTTTCTCTTGAGTaGGGCCTTTGGAGAAACAAG +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPFSLE*GLWRNK
Trigger: CTTGTTTCTCCAAAGGCCCAACTCAAGAGAAAATGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTACCCCCATTTTCTCTaGAGTTGGGCCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSYPHFL*SWAFGE
Trigger: TTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGTA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATCCTTAGTCTCACTCTaGGTCAAGATCTGGTCCACT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSESLVSL*VKIWST
Trigger: AGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCCTTAGTCTCACTCTaGGTCAAGATCTGGTCCACT +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSLVSL*VKIWST
Trigger: AGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGATGGGAGCATGTGGTaGAGTTGGAACTCGAGCATA +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPDGSMW*SWNSSI
Trigger: TATGCTCGAGTTCCAACTCAACCACATGCTCCCATC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGAGACTGCCGGGAACTaGAAATGTGTTTTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSETAGN*KCVLAF
Trigger: AAAGGCTAAAACACATTTCAAGTTCCCGGCAGTCTC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGATACAACCCTCAAAATaGCTCCCGCCCAGACGCAGA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLIQPSK*LPPRRR
Trigger: TCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTAT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCCACTGACTTTGGTTAGCTTGCCATATGAAGCTTCAGTGATGGTGCGTTACCTCTGGACAAAAACATaGCTAATACAACCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: IPLTLVSLPYEASVMVRYLWTKT*LIQPSK
Trigger: TTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAG...GTAACGCACCATCACTGAAGCTTCATATGGCAAGCTAACCAAAGTCAGTGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAGGGACACATCTCTCTaGAGAGAGTTACTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSRDTSL*RELLVK
Trigger: TTTGACCAGTAACTCTCTCAAGAGAGATGTGTCCCT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTCCTGCAACAGCTGGTaGATACGAAAAGTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPESCNSW*IRKVLV
Trigger: GACCAAGACTTTTCGTATCAACCAGCTGTTGCAGGA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTCCTCTGGAGGATGTaGTCTGCATGTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVLWRM*SACPQQ
Trigger: TTGCTGTGGACATGCAGACAACATCCTCCAGAGGAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGTCCTCTGGAGGATGTaGTCTGCATGTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLVLWRM*SACPQQ
Trigger: TTGCTGTGGACATGCAGACAACATCCTCCAGAGGAC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAGGTGCAGGATGTGTaGTTTTATGGTGACTGCCAC +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPQVQDV*FYGDCH
Trigger: GTGGCAGTCACCATAAAACAACACATCCTGCACCTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATGCTGTGAAATAGGCTaGGGTTACTGGTCAGGACAA +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSECCEIG*GYWSGQ
Trigger: TTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCA...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCTGTGAAATAGGCTaGGGTTACTGGTCAGGACAA +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSCCEIG*GYWSGQ
Trigger: TTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGTGCTGTGAAATAGGCTaGGGTTACTGGTCAGGACAA +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPECCEIG*GYWSGQ
Trigger: TTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCA...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTGCTGTGAAATAGGCTaGGGTTACTGGTCAGGACAA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDCCEIG*GYWSGQ
Trigger: TTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCGCTTGCAGTTGACTTaGACCGGGAGGCTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCRLQLT*TGRLKK
Trigger: TTTCTTCAGCCTCCCGGTCAAAGTCAACTGCAAGCG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269217.11
CDS-3UTR CAA 90 bp GCTCCATCTGCTGTTTCAAGGAACTCTGACTTCCAGTCCCATTTAGTATACAATTTGCTTCAGGTCATCTaGGGTTTGACAAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: APSAVSRNSDFQSHLVYNLLQVI*GLTKSN
Trigger: GTTGCTTTTTGTCAAACCCAAGATGACCTGAAGCAA...ATTGTATACTAAATGGGACTGGAAGTCAGAGTTCCTTGAAACAGCAGATGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCATCCATCCCACTGACTTaGGTTAGCTTGCCATATGAA +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSSIPLT*VSLPYE
Trigger: TTCATATGGCAAGCTAACCAAAGTCAGTGGGATGGA...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 90 bp CAATATCACCTCTCTGTATCCCATGAAGACCATCTCGGAGAGTTGTaGGATTGGTGTCTATCACTTCTTTCTGAACTGTCACAATATTCA +
Preference number: 5 (lower is better)
Translates to: QYHLSVSHEDHLGEL*DWCLSLLSELSQYS
Trigger: TGAATATTGTGACAGTTCAGAAAGAAGTGATAGACACCAATCTCACAACTCTCCGAGATGGTCTTCATGGGATACAGAGAGGTGATATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS GCA 90 bp TCCAAGAAGCGTATTGGTTCTAAGAAAACGCAAGCGGATGTTTGTTaGCTTGGTAAACTCCCTCAGGGTGTGAGAGAAAGTAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: SKKRIGSKKTQADVC*LGKLPQGVRESKIF
Trigger: AAAAATTTTACTTTCTCTCACACCCTGAGGGAGTTTACCAAGGCAACAAACATCCGCTTGCGTTTTCTTAGAACCAATACGCTTCTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 90 bp ACAAACATATTCTCAGTACCCCCATTTTCTCTTGAGTTGGGCCTTTaGAGAAACAAGGACAGAGATGTATATCCTTTCAAATCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TNIFSVPPFSLELGL*RNKDRDVYPFKSSR
Trigger: CCTGGAAGATTTGAAAGGATATACATCTCTGTCCTTGTTTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGTACTGAGAATATGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACCACTGGGGTTTTCTTaGTCCAGATTCCAATATAAC +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSPLGFS*SRFQYN
Trigger: GTTATATTGGAATCTGGACAAAGAAAACCCCAGTGG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATAGGTATGATACAAACTaGATGCAGAAGGAATCGGGC +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDRYDTN*MQKESG
Trigger: GCCCGATTCCTTCTGCATCAAGTTTGTATCATACCT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGACACAGGTGGCACTTaGATTGACAAATCGCCCATA +
Preference number: 5 (lower is better)
Translates to: SSDEQILCRGYGNACVAFDTGGT*IDKSPI
Trigger: TATGGGCGATTTGTCAATCAAAGTGCCACCTGTGTC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCCAAAATTAATGCTGTaGGAGGAGTTTCATGGGCCA +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSPKLML*EEFHGP
Trigger: TGGCCCATGAAACTCCTCCAACAGCATTAATTTTGG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTGTACAACCCTTGAGATaGGCTGGGTCCAAATGGAAT +
Preference number: 5 (lower is better)
Translates to: THKTLISICSVIICRRLCVQPLR*AGSKWN
Trigger: ATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTAC...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGCTATCTTTGGGTTCTaGGTTTATGCAGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSAIFGF*VYAVSS
Trigger: ACTGGAGACTGCATAAACCAAGAACCCAAAGATAGC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCCACAAGGGATGTTTaGCCAGCAGATCTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSTRDV*PADLES
Trigger: ACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGGA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGTTTGCTGTAGGTTGTaGAGAGCTGGACTGACTTCT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPVCCRL*RAGLTS
Trigger: AGAAGTCAGTCCAGCTCTCAACAACCTACAGCAAAC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACGGAGAGTTGTGAGATaGGTGTCTATCACTTCTTTC +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSERRVVR*VSITSF
Trigger: GAAAGAAGTGATAGACACCAATCTCACAACTCTCCG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAGTCAGAGCCTTTTaGAAGTCTTCGTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSVRAF*KSSFCV
Trigger: GACACAGAACGAAGACTTCAAAAAGGCTCTGACTGA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGCAACAGCTGTTGGTaGATACTTTCAATCTTGCGC +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPGNSCW*ILSILR
Trigger: GCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACAAGGGCAACAGCTGTaGGTTGATACTTTCAATCTT +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSQGQQL*VDTFNL
Trigger: AAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCGTATTCTGTCCATGTaGTCAGAGATGTTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRILSM*SEMFPK
Trigger: CTTGGGAAACATCTCTGACAACATGGACAGAATACG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCGTATTCTGTCCATGTaGTCAGAGATGTTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPERILSM*SEMFPK
Trigger: CTTGGGAAACATCTCTGACAACATGGACAGAATACG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTAATCTTCCAGGTCATTaGGCAGTCGGACTTCGACTC +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCNLPGH*AVGLRL
Trigger: GAGTCGAAGTCCGACTGCCAAATGACCTGGAAGATT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACCATTTTCTCTTGAGTaGGGCCTTTGGAGAAACAAG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEPFSLE*GLWRNK
Trigger: CTTGTTTCTCCAAAGGCCCAACTCAAGAGAAAATGG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTTACCCCCATTTTCTCTaGAGTTGGGCCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: THKTLISICSVIICRRLCYPHFL*SWAFGE
Trigger: TTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGTA...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCCTTAGTCTCACTCTaGGTCAAGATCTGGTCCACT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSLVSL*VKIWST
Trigger: AGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTTGTCTGTCCAAAGGTaGGGATGGGAGCATGTGGTT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLSVQR*GWEHVV
Trigger: AACCACATGCTCCCATCCCAACCTTTGGACAGACAA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACAACTCCTCTCTCTTTaGGTAGCTCTGAATTCAGTT +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSQLLSL*VALNSV
Trigger: AACTGAATTCAGAGCTACCAAAAGAGAGAGGAGTTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGAATGGTCTCTGCCGTaGTTTATGGCGTCTCCAACT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCEWSLP*FMASPT
Trigger: AGTTGGAGACGCCATAAACAACGGCAGAGACCATTC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCTTCCGAGCACTTTTaGGTTACTCCCACAGTATCA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSSEHF*VTPTVS
Trigger: TGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGAGACTGCCGGGAACTaGAAATGTGTTTTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSETAGN*KCVLAF
Trigger: AAAGGCTAAAACACATTTCAAGTTCCCGGCAGTCTC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAATTAGAAAAGGTGGTTaGTTTAAACTGCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSIRKGG*FKLQPP
Trigger: GGGAGGCTGCAGTTTAAACAAACCACCTTTTCTAAT...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTATCCCACAAAGCTGTTaGTGGGGAGGCTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCIPQSC*WGGSLV
Trigger: AACCAAAGAGCCTCCCCACAAACAGCTTTGTGGGAT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGGGTATACAAGGGTTTaGAATCCAGCTGAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSGYTRV*NPAESS
Trigger: AGAACTTTCAGCTGGATTCAAAACCCTTGTATACCC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AGATGTCCATTGCTTCAGGTCATCTTGGGTTTGACAAAAAGCAACATGAAAGTAAATGAGTCTTTTTCCTaGTGCTATGCACCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RCPLLQVILGLTKSNMKVNESFS*CYAPRY
Trigger: GTACCTGGGTGCATAGCACAAGGAAAAAGACTCATT...TACTTTCATGTTGCTTTTTGTCAAACCCAAGATGACCTGAAGCAATGGACATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CAA 90 bp GTAGTAGTAATACAATGTTCAAGGCCATGGCCAAGAACTGGATGGGTTTACTGCATTTTTAATAAGCCCTaGTCAGTTAGTGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: VVVIQCSRPWPRTGWVYCIFNKP*SVSALG
Trigger: TCCAAGAGCACTAACTGACAAGGGCTTATTAAAAAT...GCAGTAAACCCATCCAGTTCTTGGCCATGGCCTTGAACATTGTATTACTACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS-3UTR CAA 90 bp CCAGAAAATTCCATTAAACGAAAGAGAGTAAAACTCACTCACAGCTCTGACAGATCCACTCACCCAGAGTaGTCGCTTATTACAGATACA +
Preference number: 5 (lower is better)
Translates to: PENSIKRKRVKLTHSSDRSTHPE*SLITDT
Trigger: TGTATCTGTAATAAGCGACAACTCTGGGTGAGTGGA...TCTGTCAGAGCTGTGAGTGAGTTTTACTCTCTTTCGTTTAATGGAATTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588164.2
CDS GCA 90 bp AAAAATGGGAATTCTCAAGCAAAATGGGAAATTGTAGTATCCAATTaGACACTTCTCACAGTTGTCTCCGTGGAAATTTGGCTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: KNGNSQAKWEIVVSN*TLLTVVSVEIWLAV
Trigger: CACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTGCAATTGGATACTACAATTTCCCATTTTGCTTGAGAATTCCCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 90 bp GGTACATCACAAACATATTCTCAGTACCCCCATTTTCTCTTGAGTTaGGCCTTTGGAGAAACAAGGACAGAGATGTATATCCTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: GTSQTYSQYPHFLLS*AFGETRTEMYILSN
Trigger: ATTTGAAAGGATATACATCTCTGTCCTTGTTTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGTACTGAGAATATGTTTGTGATGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCAGGATTGTTTATATaGCACACTTCAGCATGGCCA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDSGLFI*HTSAWP
Trigger: TGGCCATGCTGAAGTGTGCAATATAAACAATCCTGA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTTCCAATATAACAGTTaGCAGCGGCTACAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDFQYNS*QRLQVG
Trigger: TCCTACTTGTAGCCGCTGCAAACTGTTATATTGGAA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTCACACTGACACCCTaGACACCCAAAGTAATTGCT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVTLTP*TPKVIA
Trigger: AGCAATTACTTTGGGTGTCAAGGGTGTCAGTGTGAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTTACAACTGCATGGTaGGCAGCTACCTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVTTAW*AATSEF
Trigger: AAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGCTATCTTTGGGTTCTaGGTTTATGCAGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPAIFGF*VYAVSS
Trigger: ACTGGAGACTGCATAAACCAAGAACCCAAAGATAGC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCAGTTCTTTTGCGCTTaGTGTTGCCCGATTAACATT +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDQFFCA*CCPINI
Trigger: AATGTTAATCGGGCAACACAAAGCGCAAAAGAACTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCAGTTCTTTTGCGCTTaGTGTTGCCCGATTAACATT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSQFFCA*CCPINI
Trigger: AATGTTAATCGGGCAACACAAAGCGCAAAAGAACTG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGCAGTGGTTAGATACTaGGTGAAATCACTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCAVVRY*VKSLCR
Trigger: CCTGCAGAGTGATTTCACCAAGTATCTAACCACTGC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCACACTTAGTTCTTGTCTaGCTTCATTTAAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSHLVLV*LHLNWQ
Trigger: CTGCCAGTTTAAATGAAGCAAGACAAGAACTAAGTG...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGGCAACAGCTGTTGGTaGATACTTTCAATCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLGNSCW*ILSILR
Trigger: GCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTACCCCCATTTTCTCTaGAGTTGGGCCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLYPHFL*SWAFGE
Trigger: TTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGTA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAGCTCTGAATTCAGTTaGTATCTCACCATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSSSEFS*YLTMSL
Trigger: CAAGCTCATGGTGAGATACAAACTGAATTCAGAGCT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACAACTCCTCTCTCTTTaGGTAGCTCTGAATTCAGTT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEQLLSL*VALNSV
Trigger: AACTGAATTCAGAGCTACCAAAAGAGAGAGGAGTTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTCTTCCGAGCACTTTTaGGTTACTCCCACAGTATCA +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSSEHF*VTPTVS
Trigger: TGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAGA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp TCTTCTGATGAACAAATACTATGTAGAGGATATGGAAATGCTTGTGTAGCCTTCGAGACTGCCGGGAACTaGAAATGTGTTTTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SSDEQILCRGYGNACVAFETAGN*KCVLAF
Trigger: AAAGGCTAAAACACATTTCAAGTTCCCGGCAGTCTC...GAAGGCTACACAAGCATTTCCATATCCTCTACATAGTATTTGTTCATCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCGAAAAGTCTTGGTCTaGTTAAACCTGGTAGAACCT +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPERKVLV*LNLVEP
Trigger: AGGTTCTACCAGGTTTAACAAGACCAAGACTTTTCG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AGTTTGATGGAGAGAAAACAGTTAAGCCAATGTTTTACCTTATGGCAAAGATGGCTAAAACCTACGTTTTaGCATTCCCTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SLMERKQLSQCFTLWQRWLKPTF*HSLEEK
Trigger: CTTCTCCTCCAGGGAATGCAAAAACGTAGGTTTTAG...CCATCTTTGCCATAAGGTAAAACATTGGCTTAACTGTTTTCTCTCCATCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590104.1
CDS TCA 90 bp CAGATTACAGTCACACCCTTTTATATCTCCAGCTACTGGATCTTCTaGACTTGGTGTAGAAACAGGAAAAATGGGAATTCTCAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: QITVTPFYISSYWIF*TWCRNRKNGNSQAK
Trigger: TTTTGCTTGAGAATTCCCATTTTTCCTGTTTCTACACCAAGTTCAGAAGATCCAGTAGCTGGAGATATAAAAGGGTGTGACTGTAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 90 bp TGTTGGTTTGCAACAAAGATGAGTCTGCAGTGGTTAGATACTTGGTaGAATCACTCTGCAGGGAATTTATTTCTTTCACTTGTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: CWFATKMSLQWLDTW*NHSAGNLFLSLVSE
Trigger: TTCAGAGACAAGTGAAAGAAATAAATTCCCTGCAGAGTGATTTCACCAAGTATCTAACCACTGCAGACTCATCTTTGTTGCAAACCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTGTCCAAGAAGCGTATaGGTTCTAAGAAAACGCAAG +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPCPRSV*VLRKRK
Trigger: CTTGCGTTTTCTTAGAACCAATACGCTTCTTGGACA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGGCTATCTTTGGGTTCTaGGTTTATGCAGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLAIFGF*VYAVSS
Trigger: ACTGGAGACTGCATAAACCAAGAACCCAAAGATAGC...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAGTTGCCCGATTAACATaGTTGTTTAATGTTTGTGCT +
Preference number: 5 (lower is better)
Translates to: NTHVALNAKVMGIHGQNSVARLT*LFNVCA
Trigger: AGCACAAACATTAAACAACAATGTTAATCGGGCAAC...TGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAGTTCTTTTGCGCTTaGTGTTGCCCGATTAACATT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPQFFCA*CCPINI
Trigger: AATGTTAATCGGGCAACACAAAGCGCAAAAGAACTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCCGAAGGTCACTGAGTTaGGCTTCGTATTCATTTAAA +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSRRSLS*ASYSFK
Trigger: TTTAAATGAATACGAAGCCAAACTCAGTGACCTTCG...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACGAAGGTCACTGAGTTaGGCTTCGTATTCATTTAAA +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSERRSLS*ASYSFK
Trigger: TTTAAATGAATACGAAGCCAAACTCAGTGACCTTCG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCACTTAGTTCTTGTCTaGCTTCATTTAAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDHLVLV*LHLNWQ
Trigger: CTGCCAGTTTAAATGAAGCAAGACAAGAACTAAGTG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACACTTAGTTCTTGTCTaGCTTCATTTAAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEHLVLV*LHLNWQ
Trigger: CTGCCAGTTTAAATGAAGCAAGACAAGAACTAAGTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAACAGTTTATCACTGTaGGAACTCAGGGTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSENSLSL*ELRVLA
Trigger: AGCTAAAACCCTGAGTTCCAACAGTGATAAACTGTT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCGGAGAGTTGTGAGATaGGTGTCTATCACTTCTTTC +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCRRVVR*VSITSF
Trigger: GAAAGAAGTGATAGACACCAATCTCACAACTCTCCG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCAGTCAGAGCCTTTTaGAAGTCTTCGTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLSVRAF*KSSFCV
Trigger: GACACAGAACGAAGACTTCAAAAAGGCTCTGACTGA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATAGATCAGGTAGTTTGTaGGTTAACTTATTCACCGAG +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDRSGSL*VNLFTE
Trigger: CTCGGTGAATAAGTTAACCAACAAACTACCTGATCT...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAAAGATCAGGTAGTTTGTaGGTTAACTTATTCACCGAG +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSERSGSL*VNLFTE
Trigger: CTCGGTGAATAAGTTAACCAACAAACTACCTGATCT...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTGATACTTTCAATCTaGCGCCAAAGATCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSLILSI*RQRSGS
Trigger: ACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCAAGGGCAACAGCTGTaGGTTGATACTTTCAATCTT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPQGQQL*VDTFNL
Trigger: AAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTAGCTCTGAATTCAGTTaGTATCTCACCATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPSSEFS*YLTMSL
Trigger: CAAGCTCATGGTGAGATACAAACTGAATTCAGAGCT...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ACACACAAAACCCTCATCAGTATATGCTCAGTGATTATCTGTAGAAGACTATGTAGCTCTGAATTCAGTTaGTATCTCACCATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: THKTLISICSVIICRRLCSSEFS*YLTMSL
Trigger: CAAGCTCATGGTGAGATACAAACTGAATTCAGAGCT...ACATAGTCTTCTACAGATAATCACTGAGCATATACTGATGAGGGTTTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCATGTGTTTTAGCCTTTaGCTATTTCTCAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSMCFSL*LFLRSW
Trigger: CCAGCTTCTGAGAAATAGCAAAAGGCTAAAACACAT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCGAAAAGTCTTGGTCTaGTTAAACCTGGTAGAACCT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPRKVLV*LNLVEP
Trigger: AGGTTCTACCAGGTTTAACAAGACCAAGACTTTTCG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGGGTATACAAGGGTTTaGAATCCAGCTGAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPGYTRV*NPAESS
Trigger: AGAACTTTCAGCTGGATTCAAAACCCTTGTATACCC...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS TCA 90 bp CCTGCAGTTAACCTGACAACACTAAAAGCAGTGCATATGGCTACTTaGATGAAGGAATCATTAAGAATCTATTCAAAGAATCTCGTCCAA +
Preference number: 5 (lower is better)
Translates to: PAVNLTTLKAVHMAT*MKESLRIYSKNLVQ
Trigger: TTGGACGAGATTCTTTGAATAGATTCTTAATGATTCCTTCATTCAAGTAGCCATATGCACTGCTTTTAGTGTTGTCAGGTTAACTGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588770.5
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCAATTGTAGTATCCAATaGCACACTTCTCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSNCSIQ*HTSHSC
Trigger: ACAACTGTGAGAAGTGTGCAATTGGATACTACAATT...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAACATGAAGCTTGCATaGGCAATACCCCAAATTGGA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLNMKLA*AIPQIG
Trigger: TCCAATTTGGGGTATTGCCAATGCAAGCTTCATGTT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCGTTGCCCGATTAACATaGTTGTTTAATGTTTGTGCT +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSVARLT*LFNVCA
Trigger: AGCACAAACATTAAACAACAATGTTAATCGGGCAAC...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTCGAAGGTCACTGAGTTaGGCTTCGTATTCATTTAAA +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPRRSLS*ASYSFK
Trigger: TTTAAATGAATACGAAGCCAAACTCAGTGACCTTCG...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTGAGCAAAGATCAGGTAGTTaGTTGGTTAACTTATTCACC +
Preference number: 5 (lower is better)
Translates to: GQNSKLDSLLNLSGLCPEQRSGS*LVNLFT
Trigger: GGTGAATAAGTTAACCAACAAACTACCTGATCTTTG...CTCAGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp ATAAAATACACATGTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAACAAAGATCAGGTAGTTaGTTGGTTAACTTATTCACC +
Preference number: 5 (lower is better)
Translates to: IKYTCSTECQSDGYPWSEQRSGS*LVNLFT
Trigger: GGTGAATAAGTTAACCAACAAACTACCTGATCTTTG...TTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTACATGTGTATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000313654.14
CDS-3UTR CAA 90 bp CCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTATCTCACCATGAGCTaGCCATCTTCTATATTTAGA +
Preference number: 5 (lower is better)
Translates to: PWSEFKIRFAIKPVWFVSYLTMS*PSSIFR
Trigger: TCTAAATATAGAAGATGGCAAGCTCATGGTGAGATA...GGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATCTCTGGACAAAAACATaGCTAATACAACCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLWTKT*LIQPSK
Trigger: TTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAG...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGATTAGAAAAGGTGGTTaGTTTAAACTGCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLIRKGG*FKLQPP
Trigger: GGGAGGCTGCAGTTTAAACAAACCACCTTTTCTAAT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp GTAGCACTGAATGCCAAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTTGATACGAAAAGTCTaGGTCTTGTTAAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: VALNAKVMGIHGQNSKLDLIRKV*VLLNLV
Trigger: TACCAGGTTTAACAAGACCAAGACTTTTCGTATCAA...ATCTAATTTTGAATTCTGACCATGGATACCCATCACTTTGGCATTCAGTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGGGTATACAAGGGTTTaGAATCCAGCTGAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCGYTRV*NPAESS
Trigger: AGAACTTTCAGCTGGATTCAAAACCCTTGTATACCC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGAACAGTTTATCACTGTaGGAACTCAGGGTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLNSLSL*ELRVLA
Trigger: AGCTAAAACCCTGAGTTCCAACAGTGATAAACTGTT...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTTTGATACTTTCAATCTaGCGCCAAAGATCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLILSI*RQRSGS
Trigger: ACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAA...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp CATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCCTTATCTCACCATGAGCTaGCCATCTTCTATATTTAGA +
Preference number: 5 (lower is better)
Translates to: HGQNSKLDSLLNLSGLCPYLTMS*PSSIFR
Trigger: TCTAAATATAGAAGATGGCAAGCTCATGGTGAGATA...AGGACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTATGTGTTTTAGCCTTTaGCTATTTCTCAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCMCFSL*LFLRSW
Trigger: CCAGCTTCTGAGAAATAGCAAAAGGCTAAAACACAT...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTTTTTGATCCATGATTaGAAATGGCAGAACGGTAGT +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLFLIHD*KWQNGS
Trigger: ACTACCGTTCTGCCATTTCAAATCATGGATCAAAAA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTGTTGCCCGATTAACATaGTTGTTTAATGTTTGTGCT +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCVARLT*LFNVCA
Trigger: AGCACAAACATTAAACAACAATGTTAATCGGGCAAC...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTATCTCACCATGAGCTaGCCATCTTCTATATTTAGA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLYLTMS*PSSIFR
Trigger: TCTAAATATAGAAGATGGCAAGCTCATGGTGAGATA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp ATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTCTGGTTTGTGTCTCTGGACAAAAACATaGCTAATACAACCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: IHGQNSKLDSLLNLSGLCLWTKT*LIQPSK
Trigger: TTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAG...ACACAAACCAGACAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS-3UTR CAA 90 bp AAAGTGATGGGTATCCATGGTCAGAATTCAAAATTAGATTCGCTATTAAACCTGTTGATACGAAAAGTCTaGGTCTTGTTAAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: KVMGIHGQNSKLDSLLNLLIRKV*VLLNLV
Trigger: TACCAGGTTTAACAAGACCAAGACTTTTCGTATCAA...CAGGTTTAATAGCGAATCTAATTTTGAATTCTGACCATGGATACCCATCACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000649721.1
CDS GCA 72 bp CAGGAGCAGCGGCGTCGGCGGCAGTACTGGCCCCAGTaGCCGACCCCGAGGCCGCGCGGCCGCCGCCATCCA +
Preference number: 6 (lower is better)
Translates to: QEQRRRRQYWPQ*PTPRPRGRRHP
Trigger: TGGATGGCGGCGGCCGCGCGGCCTCGGGGTCGGGCACTGGGGCCAGTACTGCCGCCGACGCCGCTGCTCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000585600.5
CDS GCA 72 bp GGGGCACCGCCGCTCTCCGCCTGCGCCTCCCGGACCTaGAGCGCCAGGACTAGCGCAGCCGGGGATATGGGC +
Preference number: 6 (lower is better)
Translates to: GAPPLSACASRT*SARTSAAGDMG
Trigger: GCCCATATCCCCGGCTGCGCTAGTCCTGGCGCTGCAGGTCCGGGAGGCGCAGGCGGAGAGCGGCGGTGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS CCA 72 bp CGCTCCCCTTGCTCCACGCGCTGGAAGCCCGCGGCGTaGGGGTGGCCTCTCAGCTCTGGAACCTGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: RSPCSTRWKPAA*GWPLSSGTCRG
Trigger: GCCGCGGCAGGTTCCAGAGCTGAGAGGCCACCCCCACGCCGCGGGCTTCCAGCGCGTGGAGCAAGGGGAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS GCA 72 bp CCCGCGGCGTGGGGGTGGCCTCTCAGCTCTGGAACCTaGCGCGGCTGGAGCGGGCACCAGCCGGATCAGGAA +
Preference number: 6 (lower is better)
Translates to: PAAWGWPLSSGT*RGWSGHQPDQE
Trigger: TTCCTGATCCGGCTGGTGCCCGCTCCAGCCGCGGCAGGTTCCAGAGCTGAGAGGCCACCCCCACGCCGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313654.14
CDS CCA 72 bp ACTGGCCCTGGATGGTGTGGCCGCTGCCTGGGGCGGTaGGGCCCCCGACCAACTTGCAGTAGAGCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: TGPGWCGRCLGR*GPRPTCSRARA
Trigger: AGCCCGAGCTCTACTGCAAGTTGGTCGGGGGCCCCACCGCCCCAGGCAGCGGCCACACCATCCAGGGCCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp CACTGGGGCCTGACCGTGCGGGGAGGGCAGCGGCACTaGCCCGTCATCTCTTCACAAAGGCGCCGACCACAG +
Preference number: 6 (lower is better)
Translates to: HWGLTVRGGQRH*PVISSQRRRPQ
Trigger: CTGTGGTCGGCGCCTTTGTGAAGAGATGACGGGGCAGTGCCGCTGCCCTCCCCGCACGGTCAGGCCCCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 90 bp CCCCCAGGTAGGAGGTGGGTGCGACCCAGGACGCGCTGTGGATGGTaGCGGGCAGCTCCTGGAGATCCGCCACCATACTGTTGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PPGRRWVRPRTRCGW*RAAPGDPPPYCCCL
Trigger: CAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGTCGCACCCACCTCCTACCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp TGGCTCTGCTCCCAAGCGGCGGGCCGCCAGCGCCTCTaGTTGTACCCTGTGCAGCAGCGATCACACGTCTCC +
Preference number: 6 (lower is better)
Translates to: WLCSQAAGRQRL*LYPVQQRSHVS
Trigger: GGAGACGTGTGATCGCTGCTGCACAGGGTACAATCAGAGGCGCTGGCGGCCCGCCGCTTGGGAGCAGAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp GCACGGCTTGCAGCGTGGGAATCCGTAGTGGCCTGTTaGACAGCGGGTGCACTGCCGCCCGATGACGTTGGG +
Preference number: 6 (lower is better)
Translates to: ARLAAWESVVAC*TAGALPPDDVG
Trigger: CCCAACGTCATCGGGCGGCAGTGCACCCGCTGTGCAACAGGCCACTACGGATTCCCACGCTGCAAGCCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp CACACTCCGGCATGGCAGCCTCGATGGTGCCCCTCCTaGAACAGTTGCAGCCTTCGCAGCCGGCCATGGGGT +
Preference number: 6 (lower is better)
Translates to: HTPAWQPRWCPS*NSCSLRSRPWG
Trigger: ACCCCATGGCCGGCTGCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGCCGGAGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp CGCTGTCCCGGTCACACTCCGGCATGGCAGCCTCGATaGTGCCCCTCCTGGAACAGTTGCAGCCTTCGCAGC +
Preference number: 6 (lower is better)
Translates to: RCPGHTPAWQPR*CPSWNSCSLRS
Trigger: GCTGCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGCCGGAGTGTGACCGGGACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp GGTAGGAGGTGGGTGCGACCCAGGACGCGCTGTGGATaGTTGCGGGCAGCTCCTGGAGATCCGCCACCATAC +
Preference number: 6 (lower is better)
Translates to: GRRWVRPRTRCG*LRAAPGDPPPY
Trigger: GTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGTCGCACCCACCTCCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp GGCATGGCAGCCTCGATGGTGCCCCTCCTGGAACAGTaGCAGCCTTCGCAGCCGGCCATGGGGTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: GMAASMVPLLEQ*QPSQPAMGWKL
Trigger: CAGCTTCCACCCCATGGCCGGCTGCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp AAGCGGCGGGCCGCCAGCGCCTCTGATTGTACCCTGTaGAGCAGCGATCACACGTCTCCCCACAGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: KRRAASASDCTL*SSDHTSPHRCG
Trigger: ACCACACCTGTGGGGAGACGTGTGATCGCTGCTGCACAGGGTACAATCAGAGGCGCTGGCGGCCCGCCGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp CTCAGGTCCTTGGCCTGGGTCTCCATGTGCCTCATCTaGTCCAGAAGCCCTGCGCTGGCACTCAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LRSLAWVSMCLI*SRSPALALRPC
Trigger: GCAGGGCCTGAGTGCCAGCGCAGGGCTTCTGGAGCAGATGAGGCACATGGAGACCCAGGCCAAGGACCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 72 bp CGCTGGCACACCTTTCCCACGACATGCTCTCGGCACTaGCACACTCCCGAGGGCCCACTGCACATGGAGGAC +
Preference number: 6 (lower is better)
Translates to: RWHTFPTTCSRH*HTPEGPLHMED
Trigger: GTCCTCCATGTGCAGTGGGCCCTCGGGAGTGTGCCAGTGCCGAGAGCATGTCGTGGGAAAGGTGTGCCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp ATCTGCACTGCCCGCTGTCCCGGTCACACTCCGGCATaGCAGCCTCGATGGTGCCCCTCCTGGAACAGTTGC +
Preference number: 6 (lower is better)
Translates to: ICTARCPGHTPA*QPRWCPSWNSC
Trigger: GCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGCCGGAGTGTGACCGGGACAGCGGGCAGTGCAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp AGGAGGTGGGTGCGACCCAGGACGCGCTGTGGATGGTaGCGGGCAGCTCCTGGAGATCCGCCACCATACTGT +
Preference number: 6 (lower is better)
Translates to: RRWVRPRTRCGW*RAAPGDPPPYC
Trigger: ACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGTCGCACCCACCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp ACCCAGGACGCGCTGTGGATGGTTGCGGGCAGCTCCTaGAGATCCGCCACCATACTGTTGCTGCCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: TQDALWMVAGSS*RSATILLLPGL
Trigger: CAACCCAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 90 bp TCACACTCCGGCATGGCAGCCTCGATGGTGCCCCTCCTGGAACAGTaGCAGCCTTCGCAGCCGGCCATGGGGTGGAAGCTGAATGAGTGT +
Preference number: 6 (lower is better)
Translates to: SHSGMAASMVPLLEQ*QPSQPAMGWKLNEC
Trigger: ACACTCATTCAGCTTCCACCCCATGGCCGGCTGCGAAGGCTGCAACTGTTCCAGGAGGGGCACCATCGAGGCTGCCATGCCGGAGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp GCAGCCTTCGCAGCCGGCCATGGGGTGGAAGCTGAATaGGTGTGTCTCACACACCTCACACTGGGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: AAFAAGHGVEAE*VCLTHLTLGPD
Trigger: GTCAGGCCCCAGTGTGAGGTGTGTGAGACACACTCATTCAGCTTCCACCCCATGGCCGGCTGCGAAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp ACCGGGAGGCTGAAGAAATGGCACCCTTTGCTGCTGTaGACTGTAGCCCAGACACTGCCCCAGGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: TGRLKKWHPLLL*TVAQTLPQGCP
Trigger: GGGGCAGCCCTGGGGCAGTGTCTGGGCTACAGTTCACAGCAGCAAAGGGTGCCATTTCTTCAGCCTCCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000587184.5
CDS GCA 72 bp TTGTTTTCAGGCCGCTGGCACACCTTTCCCACGACATaGTCTCGGCACTGGCACACTCCCGAGGGCCCACTG +
Preference number: 6 (lower is better)
Translates to: LFSGRWHTFPTT*SRHWHTPEGPL
Trigger: CAGTGGGCCCTCGGGAGTGTGCCAGTGCCGAGAGCATGTCGTGGGAAAGGTGTGCCAGCGGCCTGAAAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp GGGCCCTCAACCCCAGGGCGGCACAGGCACCGTCCGTaGGCATCACATATTTCAGGGAGAACACCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GPSTPGRHRHRP*ASHISGRTPSR
Trigger: TCTGGAAGGTGTTCTCCCTGAAATATGTGATGCCCACGGACGGTGCCTGTGCCGCCCTGGGGTTGAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 72 bp CTCGGCACTGGCACACTCCCGAGGGCCCACTGCACATaGAGGACAATGCCCCACCAATGTCACACTGACACC +
Preference number: 6 (lower is better)
Translates to: LGTGTLPRAHCT*RTMPHQCHTDT
Trigger: GGTGTCAGTGTGACATTGGTGGGGCATTGTCCTCCATGTGCAGTGGGCCCTCGGGAGTGTGCCAGTGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS TCA 72 bp AGTTGCAGCCTTCGCAGCCGGCCATGGGGTGGAAGCTaGATGAGTGTGTCTCACACACCTCACACTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SCSLRSRPWGGS*MSVSHTPHTGA
Trigger: GGCCCCAGTGTGAGGTGTGTGAGACACACTCATTCAGCTTCCACCCCATGGCCGGCTGCGAAGGCTGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp CATGCTCTCGGCACTGGCACACTCCCGAGGGCCCACTaGACATGGAGGACAATGCCCCACCAATGTCACACT +
Preference number: 6 (lower is better)
Translates to: HALGTGTLPRAH*TWRTMPHQCHT
Trigger: AGTGTGACATTGGTGGGGCATTGTCCTCCATGTGCAGTGGGCCCTCGGGAGTGTGCCAGTGCCGAGAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS GCA 72 bp ACTCGACCACAACCACGTAGTGGCCAACCTGTGGGATaGGCAGCCGCAGATGCAATTCCACCTCTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: TRPQPRSGQPVG*AAADAIPPLSR
Trigger: GCGGGAGAGAGGTGGAATTGCATCTGCGGCTGCGCATCCCACAGGTTGGCCACTACGTGGTTGTGGTCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS GCA 72 bp GCTGCCACCGAGTGCCACTGTCCATCACACAGAGACTaGTTTGGTGTGACCGACGTTGAGGTCCCACCTGCC +
Preference number: 6 (lower is better)
Translates to: AATECHCPSHRD*FGVTDVEVPPA
Trigger: GGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGACAGTGGCACTCGGTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588004.1
CDS CCA 72 bp CACCATATGAAGAAACCTTGTCCCCCAGGTAGGAGGTaGGTGCGACCCAGGACGCGCTGTGGATGGTTGCGG +
Preference number: 6 (lower is better)
Translates to: HHMKKPCPPGRR*VRPRTRCGWLR
Trigger: CCGCAACCATCCACAGCGCGTCCTGGGTCGCACCCACCTCCTACCTGGGGGACAAGGTTTCTTCATATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 90 bp CCCGCCATCCACCGACACCTGCGCGGGAAACGTCGGGTGCGCTGCTaGGTAAAAATGGATGACAAAGACGTATCGGCCCAGGTGTGGTAC +
Preference number: 6 (lower is better)
Translates to: PAIHRHLRGKRRVRC*VKMDDKDVSAQVWY
Trigger: GTACCACACCTGGGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCGCACCCGACGTTTCCCGCGCAGGTGTCGGTGGATGGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp TGTCTGAAGTTTCCCTCGACCACGTGCACTCGTCCATaGTGCAGCCGGTCTGGCCGTGGGGTGTTTGTCTCC +
Preference number: 6 (lower is better)
Translates to: CLKFPSTTCTRP*CSRSGRGVFVS
Trigger: GGAGACAAACACCCCACGGCCAGACCGGCTGCATCATGGACGAGTGCACGTGGTCGAGGGAAACTTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp ACTGCCACCGAGTGCCACTGTCCATCACACAGAGACTaGTTTGGTGTGACCGACGTTGAGGTCCCACCTGCC +
Preference number: 6 (lower is better)
Translates to: TATECHCPSHRD*FGVTDVEVPPA
Trigger: GGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGACAGTGGCACTCGGTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp CCACGGGTCTTGGCTCCCCATCAAGCAGGAAGTGTCTaGCCTCACAAGCCAGGGTACAGGGGAATCTGGTCA +
Preference number: 6 (lower is better)
Translates to: PRVLAPHQAGSV*PHKPGYRGIWS
Trigger: TGACCAGATTCCCCTGTACCCTGGCTTGTGAGGCCAGACACTTCCTGCTTGATGGGGAGCCAAGACCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp GCAGGGCGCCCTTGTGGTAAAAGGCCACCAGGGACCTaGCGGAATTCTTACAGAATCTGGAGGCTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: AGRPCGKRPPGT*RNSYRIWRLSG
Trigger: CCCAGACAGCCTCCAGATTCTGTAAGAATTCCGCCAGGTCCCTGGTGGCCTTTTACCACAAGGGCGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 90 bp GCCACATGGAAGAGCTGCCCCAGATCCAAGGTGAGGTTGACTCTGTaGTACTGTGTGCCTGAGGACAGGGGAGGGCTTTGCCACCAACGT +
Preference number: 6 (lower is better)
Translates to: ATWKSCPRSKVRLTL*YCVPEDRGGLCHQR
Trigger: ACGTTGGTGGCAAAGCCCTCCCCTGTCCTCAGGCACACAGTACAACAGAGTCAACCTCACCTTGGATCTGGGGCAGCTCTTCCATGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 90 bp CTGTGGATGGTTGCGGGCAGCTCCTGGAGATCCGCCACCATACTGTaGCTGCCTGGGTTGAAAGAGACAGGGATGTCCACTCTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: LWMVAGSSWRSATIL*LPGLKETGMSTLSA
Trigger: AGCAGACAGAGTGGACATCCCTGTCTCTTTCAACCCAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp CTTCAAGGTGACCCCAGGAAGAACATCAACAGAAGGTaGCGACTGCTGGGGCAGGTGAGGGAAAGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LQGDPRKNINRR*RLLGQVRERPA
Trigger: GGCAGGCCTTTCCCTCACCTGCCCCAGCAGTCGTCACCTTCTGTTGATGTTCTTCCTGGGGTCACCTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp GTTCAGCCTCACGGTCCCCCAGGTTGTAGACACAGGTaGGCTGGCCATCCACAACTGCCATGCCGATGTAGT +
Preference number: 6 (lower is better)
Translates to: VQPHGPPGCRHR*AGHPQLPCRCS
Trigger: ACTACATCGGCATGGCAGTTGTGGATGGCCAGCTCACCTGTGTCTACAACCTGGGGGACCGTGAGGCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp TCCATCACACAGAGACTGCTTTGGTGTGACCGACGTTaGGGTCCCACCTGCCCCACTGTCCATAGAGGCCGT +
Preference number: 6 (lower is better)
Translates to: SITQRLLWCDRR*GPTCPTVHRGR
Trigger: ACGGCCTCTATGGACAGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp AGTGCCACTGTCCATCACACAGAGACTGCTTTGGTGTaGCCGACGTTGAGGTCCCACCTGCCCCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: SATVHHTETALV*PTLRSHLPHCP
Trigger: TGGACAGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGACAGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp CACAGGTGTCGCAGGAATCGCCACCCACATGGGACTTaGAGTGACAGTCACCATCTCCCTGCCTACACTCTC +
Preference number: 6 (lower is better)
Translates to: HRCRRNRHPHGT*SDSHHLPAYTL
Trigger: GAGAGTGTAGGCAGGGAGATGGTGACTGTCACTGCAAGTCCCATGTGGGTGGCGATTCCTGCGACACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS GCA 72 bp CTCCAGTCAGGGGATGACAGCTGCCCAGCTGGCCATTaGTGTTACAACTGCATGGTTGGCAGCTACCTCCGA +
Preference number: 6 (lower is better)
Translates to: LQSGDDSCPAGH*CYNCMVGSYLR
Trigger: TCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGTCATCCCCTGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS GCA 72 bp GAGGGCAGATTCAGATGCACTGGCAGCCCTGTTGGCTaGGTCCTCGGCCGCTTTGATGGCATTGAGGATGTT +
Preference number: 6 (lower is better)
Translates to: EGRFRCTGSPVG*VLGRFDGIEDV
Trigger: AACATCCTCAATGCCATCAAAGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGCATCTGAATCTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp ATCTTCCTTTATCACTGTCTGGAGGGCAGATTCAGATaGACTGGCAGCCCTGTTGGCTGCGTCCTCGGCCGC +
Preference number: 6 (lower is better)
Translates to: IFLYHCLEGRFR*TGSPVGCVLGR
Trigger: GCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGCATCTGAATCTGCCCTCCAGACAGTGATAAAGGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp CTGGAACAGTTGCAGCCTTCGCAGCCGGCCATGGGGTaGAAGCTGAATGAGTGTGTCTCACACACCTCACAC +
Preference number: 6 (lower is better)
Translates to: LEQLQPSQPAMG*KLNECVSHTSH
Trigger: GTGTGAGGTGTGTGAGACACACTCATTCAGCTTCCACCCCATGGCCGGCTGCGAAGGCTGCAACTGTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp CTCGACCACGTGCACTCGTCCATGATGCAGCCGGTCTaGCCGTGGGGTGTTTGTCTCCTCATAGATGATGGA +
Preference number: 6 (lower is better)
Translates to: LDHVHSSMMQPV*PWGVCLLIDDG
Trigger: TCCATCATCTATGAGGAGACAAACACCCCACGGCCAGACCGGCTGCATCATGGACGAGTGCACGTGGTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp CACCGACACCTGCGCGGGAAACGTCGGGTGCGCTGCTaGGTAAAAATGGATGACAAAGACGTATCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: HRHLRGKRRVRC*VKMDDKDVSAQ
Trigger: CTGGGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCGCACCCGACGTTTCCCGCGCAGGTGTCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp GTTGCGGGCAGCTCCTGGAGATCCGCCACCATACTGTaGCTGCCTGGGTTGAAAGAGACAGGGATGTCCACT +
Preference number: 6 (lower is better)
Translates to: VAGSSWRSATIL*LPGLKETGMST
Trigger: AGTGGACATCCCTGTCTCTTTCAACCCAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp CTCGTTTTCTTGGTTCAAGCCATTTGCCTGCTTGGCTaGGGCAGCTGCCTCCTGCAGCCGAGCACGAAGGTC +
Preference number: 6 (lower is better)
Translates to: LVFLVQAICLLG*GSCLLQPSTKV
Trigger: GACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp GTGTCGCAGGAATCGCCACCCACATGGGACTTGCAGTaGCAGTCACCATCTCCCTGCCTACACTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: VSQESPPTWDLQ*QSPSPCLHSPV
Trigger: AACTGGAGAGTGTAGGCAGGGAGATGGTGACTGTCACTGCAAGTCCCATGTGGGTGGCGATTCCTGCGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS TCA 72 bp AAATTGGCTGGAGCACCTCCAAGGTGTAGTGGCTCTTaGGTGCTGGCAGGTGGGAAGGGGATCTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: KLAGAPPRCSGS*VLAGGKGICPA
Trigger: AGCTGGACAGATCCCCTTCCCACCTGCCAGCACTCAAGAGCCACTACACCTTGGAGGTGCTCCAGCCAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp ATCCACCGACACCTGCGCGGGAAACGTCGGGTGCGCTaGTTGGTAAAAATGGATGACAAAGACGTATCGGCC +
Preference number: 6 (lower is better)
Translates to: IHRHLRGKRRVR*LVKMDDKDVSA
Trigger: GGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCGCACCCGACGTTTCCCGCGCAGGTGTCGGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp CTCCAGTTCTGGAGGCTGGGAAGTCCAAGATCCAGGTaGTGGCTGGTTCAGTTTCTGCTGAGGGCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: LQFWRLGSPRSR*WLVQFLLRACF
Trigger: AAAGCAGGCCCTCAGCAGAAACTGAACCAGCCAGCACCTGGATCTTGGACTTCCCAGCCTCCAGAACTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585600.5
CDS CCA 72 bp CAGCTCCTGGAGATCCGCCACCATACTGTTGCTGCCTaGGTTGAAAGAGACAGGGATGTCCACTCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: QLLEIRHHTVAA*VERDRDVHSVC
Trigger: GCAGACAGAGTGGACATCCCTGTCTCTTTCAACCCAGGCAGCAACAGTATGGTGGCGGATCTCCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp CACGTGCACTCGTCCATGATGCAGCCGGTCTGGCCGTaGGGTGTTTGTCTCCTCATAGATGATGGACATGTG +
Preference number: 6 (lower is better)
Translates to: HVHSSMMQPVWP*GVCLLIDDGHV
Trigger: CACATGTCCATCATCTATGAGGAGACAAACACCCCACGGCCAGACCGGCTGCATCATGGACGAGTGCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp TCTAGACAGCACTGTCATCAGCTCCTCCCTAGACACTaGGGCACGGCTGCTGGCATGTCTGAAGTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: SRQHCHQLLPRH*GTAAGMSEVSL
Trigger: GAGGGAAACTTCAGACATGCCAGCAGCCGTGCCCCAGTGTCTAGGGAGGAGCTGATGACAGTGCTGTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp CCCCAAACTGGAGGGCTCCATGATTGGCCTGGGTCTTaGGAAGTGGTGAGCAAGCATCTTGCCACACCTTCA +
Preference number: 6 (lower is better)
Translates to: PQTGGLHDWPGS*EVVSKHLATPS
Trigger: TGAAGGTGTGGCAAGATGCTTGCTCACCACTTCCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp CAGTTCTGGAGGCTGGGAAGTCCAAGATCCAGGTGCTaGCTGGTTCAGTTTCTGCTGAGGGCCTGCTTTCTG +
Preference number: 6 (lower is better)
Translates to: QFWRLGSPRSRC*LVQFLLRACFL
Trigger: CAGAAAGCAGGCCCTCAGCAGAAACTGAACCAGCCAGCACCTGGATCTTGGACTTCCCAGCCTCCAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585600.5
CDS CAA 72 bp AAGAGCTGCCCCAGATCCAAGGTGAGGTTGACTCTGTaGTACTGTGTGCCTGAGGACAGGGGAGGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: KSCPRSKVRLTL*YCVPEDRGGLC
Trigger: GCAAAGCCCTCCCCTGTCCTCAGGCACACAGTACAACAGAGTCAACCTCACCTTGGATCTGGGGCAGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 72 bp GCCACATGGAAGAGCTGCCCCAGATCCAAGGTGAGGTaGACTCTGTTGTACTGTGTGCCTGAGGACAGGGGA +
Preference number: 6 (lower is better)
Translates to: ATWKSCPRSKVR*TLLYCVPEDRG
Trigger: TCCCCTGTCCTCAGGCACACAGTACAACAGAGTCAACCTCACCTTGGATCTGGGGCAGCTCTTCCATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 90 bp CACCTCGCTCAGGGTGAGCCTTTGAGTCTCTGTGAAGTAGAGGCCTaGGATGCGCACATCTGCCAGTCTAGACAGCACTGTCATCAGCTC +
Preference number: 6 (lower is better)
Translates to: HLAQGEPLSLCEVEA*DAHICQSRQHCHQL
Trigger: GAGCTGATGACAGTGCTGTCTAGACTGGCAGATGTGCGCATCCAAGGCCTCTACTTCACAGAGACTCAAAGGCTCACCCTGAGCGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 90 bp GGGATGACAGCTGCCCAGCTGGCCATTGCTGTTACAACTGCATGGTaGGCAGCTACCTCCGAATTTCTGGGGATTCCCGAAATATCCCGG +
Preference number: 6 (lower is better)
Translates to: GMTAAQLAIAVTTAW*AATSEFLGIPEISR
Trigger: CCGGGATATTTCGGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGTCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CAA 90 bp TTTATCACTGTCTGGAGGGCAGATTCAGATGCACTGGCAGCCCTGTaGGCTGCGTCCTCGGCCGCTTTGATGGCATTGAGGATGTTCTCG +
Preference number: 6 (lower is better)
Translates to: FITVWRADSDALAAL*AASSAALMALRMFS
Trigger: CGAGAACATCCTCAATGCCATCAAAGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGCATCTGAATCTGCCCTCCAGACAGTGATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp CGGGAAACGTCGGGTGCGCTGCTTGGTAAAAATGGATaGCAAAGACGTATCGGCCCAGGTGTGGTACACGTC +
Preference number: 6 (lower is better)
Translates to: RETSGALLGKNG*QRRIGPGVVHV
Trigger: GACGTGTACCACACCTGGGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCGCACCCGACGTTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp GCCTGGGTTGAAAGAGACAGGGATGTCCACTCTGTCTaGTGTCTCCAGGTGCCAGCCCAGCATATCCACAAA +
Preference number: 6 (lower is better)
Translates to: AWVERDRDVHSV*CLQVPAQHIHK
Trigger: TTTGTGGATATGCTGGGCTGGCACCTGGAGACAGCAGACAGAGTGGACATCCCTGTCTCTTTCAACCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp TTAGCAAGCCCATTGTTCTCCCCCTGGTGGGTTTTCTaGCAGGTCCTTATCCGGTTCAGCAAGAGCTGCGAC +
Preference number: 6 (lower is better)
Translates to: LASPLFSPWWVF*QVLIRFSKSCD
Trigger: GTCGCAGCTCTTGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp AAAGCTCTCTCGTTTTCTTGGTTCAAGCCATTTGCCTaGTTGGCTTGGGCAGCTGCCTCCTGCAGCCGAGCA +
Preference number: 6 (lower is better)
Translates to: KALSFSWFKPFA*LAWAAASCSRA
Trigger: TGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp TCCAGCTGCTTTGCCAGCTCTTGTAAGGACCGCGCGTaGTTTTCTGCCTCCTCCACAAGGGATGTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: SSCFASSCKDRA*FSASSTRDVLP
Trigger: TGGCAAAACATCCCTTGTGGAGGAGGCAGAAAAGCACGCGCGGTCCTTACAAGAGCTGGCAAAGCAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp CCTGTGCAGCAGCGATCACACGTCTCCCCACAGGTGTaGTGCTGGCATTCACACCGAAACAGTTTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: PVQQRSHVSPQV*CWHSHRNSFSG
Trigger: TCCTGAAAAACTGTTTCGGTGTGAATGCCAGCACCACACCTGTGGGGAGACGTGTGATCGCTGCTGCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 72 bp TTGGGGAGGTCCTGCGTAGGCACATGGTTCTGTGACTaGCAGCTGCAGTACAGAGGCTTCATAGTAGTCCCT +
Preference number: 6 (lower is better)
Translates to: LGRSCVGTWFCD*QLQYRGFIVVP
Trigger: AGGGACTACTATGAAGCCTCTGTACTGCAGCTGCCAGTCACAGAACCATGTGCCTACGCAGGACCTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp ACAGCTGCCCAGCTGGCCATTGCTGTTACAACTGCATaGTTGGCAGCTACCTCCGAATTTCTGGGGATTCCC +
Preference number: 6 (lower is better)
Translates to: TAAQLAIAVTTA*LAATSEFLGIP
Trigger: GGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 72 bp GTTCCCTCATCATGCGCTGGGCTTCAGCCCACTCTCTaGAAAAGTCACCTGAAGGCACGTTGTTTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: VPSSCAGLQPTL*KSHLKARCFPL
Trigger: GAGAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586709.1
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp TCCCGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTaGTGGGTTTTCTGCCAGGTCCTTATCCGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: SRILLASPLFSP*WVFCQVLIRFS
Trigger: GCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp TACTGGTCAGGACAACCATTCAGACTGACAGGCCCCTaGACTTCCAAGGCTTCAGTGACAGGGACAGGGATG +
Preference number: 6 (lower is better)
Translates to: YWSGQPFRLTGP*TSKASVTGTGM
Trigger: CATCCCTGTCCCTGTCACTGAAGCCTTGGAAGTCCAGGGGCCTGTCAGTCTGAATGGTTGTCCTGACCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp GCTGCCCAGCTGGCCATTGCTGTTACAACTGCATGGTaGGCAGCTACCTCCGAATTTCTGGGGATTCCCGAA +
Preference number: 6 (lower is better)
Translates to: AAQLAIAVTTAW*AATSEFLGIPE
Trigger: TTCGGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CAA 90 bp CAAAGCTCTCTCGTTTTCTTGGTTCAAGCCATTTGCCTGCTTGGCTaGGGCAGCTGCCTCCTGCAGCCGAGCACGAAGGTCACTGAGTTT +
Preference number: 6 (lower is better)
Translates to: QSSLVFLVQAICLLG*GSCLLQPSTKVTEF
Trigger: AAACTCAGTGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp ATCCAAGGTGAGGTTGACTCTGTTGTACTGTGTGCCTaGGGACAGGGGAGGGCTTTGCCACCAACGTTCAGA +
Preference number: 6 (lower is better)
Translates to: IQGEVDSVVLCA*GQGRALPPTFR
Trigger: TCTGAACGTTGGTGGCAAAGCCCTCCCCTGTCCTCAGGCACACAGTACAACAGAGTCAACCTCACCTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 72 bp TTCTCACAGTTGTCTCCGTGGAAATTTGGCTTGCAGTaGCAGCGGCCTGAACCCTGTTCACAGCCATCCGCA +
Preference number: 6 (lower is better)
Translates to: FSQLSPWKFGLQ*QRPEPCSQPSA
Trigger: TGCGGATGGCTGTGAACAGGGTTCAGGCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 72 bp CCGGAGCTCTTCACATTCACATCAACCACAAACAGCTaGGCTGCCTCCGTGGAATACTCGACCACAACCACG +
Preference number: 6 (lower is better)
Translates to: PELFTFTSTTNS*AASVEYSTTTT
Trigger: CGTGGTTGTGGTCGAGTATTCCACGGAGGCAGCTCAGCTGTTTGTGGTTGATGTGAATGTGAAGAGCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS TCA 72 bp GGGCAGCTGCCTCCTGCAGCCGAGCACGAAGGTCACTaGGTTTGGCTTCGTATTCATTTAAAGAATCCCGGA +
Preference number: 6 (lower is better)
Translates to: GQLPPAAEHEGH*VWLRIHLKNPG
Trigger: TCCGGGATTCTTTAAATGAATACGAAGCCAAACTCAGTGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp GTGCAGCAGCGATCACACGTCTCCCCACAGGTGTGGTaGTGGCATTCACACCGAAACAGTTTTTCAGGATTG +
Preference number: 6 (lower is better)
Translates to: VQQRSHVSPQVW*WHSHRNSFSGL
Trigger: CAATCCTGAAAAACTGTTTCGGTGTGAATGCCAGCACCACACCTGTGGGGAGACGTGTGATCGCTGCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp CACACACTCCTGGCTCAGTCCCATCTCTGTTGCAATTaGAGGGAACACACTCAGGAAAGCGGTAAAACCCGG +
Preference number: 6 (lower is better)
Translates to: HTLLAQSHLCCN*REHTQESGKTR
Trigger: CCGGGTTTTACCGCTTTCCTGAGTGTGTTCCCTGCAATTGCAACAGAGATGGGACTGAGCCAGGAGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp CAGGTTGTAGACACAGGTGAGCTGGCCATCCACAACTaGCATGCCGATGTAGTCCCGGGAGGCATCTTTATT +
Preference number: 6 (lower is better)
Translates to: QVVDTGELAIHN*HADVVPGGIFI
Trigger: AATAAAGATGCCTCCCGGGACTACATCGGCATGGCAGTTGTGGATGGCCAGCTCACCTGTGTCTACAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp GCTGCCGCTCAACATCTGGATCATAGTAACAGTTGCTaGCATGGCCGTGGCAGTTGCATGCTTCACACTCGT +
Preference number: 6 (lower is better)
Translates to: AAAQHLDHSNSC*HGRGSCMLHTR
Trigger: ACGAGTGTGAAGCATGCAACTGCCACGGCCATGCCAGCAACTGTTACTATGATCCAGATGTTGAGCGGCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 72 bp CTGCCCAGCTGGCCATTGCTGTTACAACTGCATGGTTaGCAGCTACCTCCGAATTTCTGGGGATTCCCGAAA +
Preference number: 6 (lower is better)
Translates to: LPSWPLLLQLHG*QLPPNFWGFPK
Trigger: TTTCGGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 72 bp CGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTGGTaGGTTTTCTGCCAGGTCCTTATCCGGTTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: RILLASPLFSPW*VFCQVLIRFSK
Trigger: CTTGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp ATAACTGCCTCCTTAGTCTCACTCTTGGTCAAGATCTaGTCCACTTGGAGTTCAGCCTCACGGTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: ITASLVSLLVKI*STWSSASRSPR
Trigger: CCTGGGGGACCGTGAGGCTGAACTCCAAGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGAGGCAGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp CGGATACTGTTAGCAAGCCCATTGTTCTCCCCCTGGTaGGTTTTCTGCCAGGTCCTTATCCGGTTCAGCATG +
Preference number: 6 (lower is better)
Translates to: RILLASPLFSPW*VFCQVLIRFSM
Trigger: CATGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399516.7
ENST00000587184.5
CDS CAA 72 bp CCCCTCCACCAGCATAGATGCCCTGGGTATTCAAGCTaGCCTGCTGCCGCTCAACATCTGGATCATAGTAAC +
Preference number: 6 (lower is better)
Translates to: PLHQHRCPGYSS*PAAAQHLDHSN
Trigger: GTTACTATGATCCAGATGTTGAGCGGCAGCAGGCAAGCTTGAATACCCAGGGCATCTATGCTGGTGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 72 bp CTCCTTAGTCTCACTCTTGGTCAAGATCTGGTCCACTaGGAGTTCAGCCTCACGGTCCCCCAGGTTGTAGAC +
Preference number: 6 (lower is better)
Translates to: LLSLTLGQDLVH*EFSLTVPQVVD
Trigger: GTCTACAACCTGGGGGACCGTGAGGCTGAACTCCAAGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp CATAACTGCCTCCTTAGTCTCACTCTTGGTCAAGATCTGGTCCACTaGGAGTTCAGCCTCACGGTCCCCCAGGTTGTAGACACAGGTGAG +
Preference number: 6 (lower is better)
Translates to: HNCLLSLTLGQDLVH*EFSLTVPQVVDTGE
Trigger: CTCACCTGTGTCTACAACCTGGGGGACCGTGAGGCTGAACTCCAAGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGAGGCAGTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp ACAGCAAGCCTCTATCCACGGTGGTCTGAATTGTCTGTCCAAAGGTaGGGATGGGAGCATGTGGTTGAGTTGGAACTCGAGCATAGCCCG +
Preference number: 6 (lower is better)
Translates to: TASLYPRWSELSVQR*GWEHVVELELEHSP
Trigger: CGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp GCTACAACCCTGGCTGGGTCTAAACTCCACATAACTCGCTTGCAGTaGACTTTGACCGGGAGGCTGAAGAAATGGCACCCTTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ATTLAGSKLHITRLQ*TLTGRLKKWHPLLL
Trigger: CAGCAGCAAAGGGTGCCATTTCTTCAGCCTCCCGGTCAAAGTCAACTGCAAGCGAGTTATGTGGAGTTTAGACCCAGCCAGGGTTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000587184.5
CDS CAA 90 bp TCCAGGGCTACAACCCTGGCTGGGTCTAAACTCCACATAACTCGCTaGCAGTTGACTTTGACCGGGAGGCTGAAGAAATGGCACCCTTTG +
Preference number: 6 (lower is better)
Translates to: SRATTLAGSKLHITR*QLTLTGRLKKWHPL
Trigger: CAAAGGGTGCCATTTCTTCAGCCTCCCGGTCAAAGTCAACTGCAAGCGAGTTATGTGGAGTTTAGACCCAGCCAGGGTTGTAGCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000587184.5
CDS TCA 72 bp TTTCTTGGGGAGGTCCTGCGTAGGCACATGGTTCTGTaGCTGGCAGCTGCAGTACAGAGGCTTCATAGTAGT +
Preference number: 6 (lower is better)
Translates to: FLGEVLRRHMVL*LAAAVQRLHSS
Trigger: ACTACTATGAAGCCTCTGTACTGCAGCTGCCAGTCACAGAACCATGTGCCTACGCAGGACCTCCCCAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS TCA 72 bp CTCTCAGGGTCACTTGATTCTGCGGTGCCTTCAAGGTaGCCCCAGGAAGAACATCAACAGAAGGTGACGACT +
Preference number: 6 (lower is better)
Translates to: LSGSLDSAVPSR*PQEEHQQKVTT
Trigger: AGTCGTCACCTTCTGTTGATGTTCTTCCTGGGGTCACCTTGAAGGCACCGCAGAATCAAGTGACCCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp GAGATGTCAAACTCAATCTGGCCTTCGGCAATCACTTaGTCCCGGCAGCCAAGCACATGGGGGCAAAAAGAG +
Preference number: 6 (lower is better)
Translates to: EMSNSIWPSAIT*SRQPSTWGQKE
Trigger: CTCTTTTTGCCCCCATGTGCTTGGCTGCCGGGATCAAGTGATTGCCGAAGGCCAGATTGAGTTTGACATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp ACTGTGACCTGGGTTTCAGCAGCTCCTGAGGAAGCTTaGATAGCAAGTGGCTGGTGGGAATGTCCCCAAACT +
Preference number: 6 (lower is better)
Translates to: TVTWVSAAPEEA*IASGWWECPQT
Trigger: AGTTTGGGGACATTCCCACCAGCCACTTGCTATTCAAGCTTCCTCAGGAGCTGCTGAAACCCAGGTCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp CCCTCCACCAGCATAGATGCCCTGGGTATTCAAGCTTaGCTGCTGCCGCTCAACATCTGGATCATAGTAACA +
Preference number: 6 (lower is better)
Translates to: PSTSIDALGIQA*LLPLNIWIIVT
Trigger: TGTTACTATGATCCAGATGTTGAGCGGCAGCAGGCAAGCTTGAATACCCAGGGCATCTATGCTGGTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp CACACTTCTCACAGTTGTCTCCGTGGAAATTTGGCTTaGAGTGACAGCGGCCTGAACCCTGTTCACAGCCAT +
Preference number: 6 (lower is better)
Translates to: HTSHSCLRGNLA*SDSGLNPVHSH
Trigger: ATGGCTGTGAACAGGGTTCAGGCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp CTTGGTTTATGCAGTCTCCAGTCAGGGGATGACAGCTaGCCAGCTGGCCATTGCTGTTACAACTGCATGGTT +
Preference number: 6 (lower is better)
Translates to: LGLCSLQSGDDS*PAGHCCYNCMV
Trigger: AACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGTCATCCCCTGACTGGAGACTGCATAAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS GCA 72 bp TTAGCAAGCCCATTGTTCTCCCCCTGGTGGGTTTTCTaGCAGGTCCTTATCCGGTTCAGCATGTGCACATTC +
Preference number: 6 (lower is better)
Translates to: LASPLFSPWWVF*QVLIRFSMCTF
Trigger: GAATGTGCACATGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399516.7
ENST00000587184.5
CDS CCA 72 bp CATTCACATCAACCACAAACAGCTGAGCTGCCTCCGTaGAATACTCGACCACAACCACGTAGTGGCCAACCT +
Preference number: 6 (lower is better)
Translates to: HSHQPQTAELPP*NTRPQPRSGQP
Trigger: AGGTTGGCCACTACGTGGTTGTGGTCGAGTATTCCACGGAGGCAGCTCAGCTGTTTGTGGTTGATGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS CCA 72 bp CCACGGTGGTCTGAATTGTCTGTCCAAAGGTTGGGATaGGAGCATGTGGTTGAGTTGGAACTCGAGCATAGC +
Preference number: 6 (lower is better)
Translates to: PRWSELSVQRLG*EHVVELELEHS
Trigger: GCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp CTGGCTGGGTCTAAACTCCACATAACTCGCTTGCAGTaGACTTTGACCGGGAGGCTGAAGAAATGGCACCCT +
Preference number: 6 (lower is better)
Translates to: LAGSKLHITRLQ*TLTGRLKKWHP
Trigger: AGGGTGCCATTTCTTCAGCCTCCCGGTCAAAGTCAACTGCAAGCGAGTTATGTGGAGTTTAGACCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000587184.5
CDS CAA 90 bp GCTTGGGCAGCTGCCTCCTGCAGCCGAGCACGAAGGTCACTGAGTTaGGCTTCGTATTCATTTAAAGAATCCCGGATACTGTTAGCAAGC +
Preference number: 6 (lower is better)
Translates to: AWAAASCSRARRSLS*ASYSFKESRILLAS
Trigger: GCTTGCTAACAGTATCCGGGATTCTTTAAATGAATACGAAGCCAAACTCAGTGACCTTCGTGCTCGGCTGCAGGAGGCAGCTGCCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp CTGTGGTATGCGGGTCTCGTGCAGCACATGTTGACAAAGCTGACTTaGTTAACTGGACCAAAGAGATACCCTTCCCATGGGCAGGCCGTT +
Preference number: 6 (lower is better)
Translates to: LWYAGLVQHMLTKLT*LTGPKRYPSHGQAV
Trigger: AACGGCCTGCCCATGGGAAGGGTATCTCTTTGGTCCAGTTAACAAAGTCAGCTTTGTCAACATGTGCTGCACGAGACCCGCATACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS CAA 90 bp TGTAGTATCCAATTGCACACTTCTCACAGTTGTCTCCGTGGAAATTaGGCTTGCAGTGACAGCGGCCTGAACCCTGTTCACAGCCATCCG +
Preference number: 6 (lower is better)
Translates to: CSIQLHTSHSCLRGN*ACSDSGLNPVHSHP
Trigger: CGGATGGCTGTGAACAGGGTTCAGGCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTGCAATTGGATACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 90 bp CGCTGGGCTTCAGCCCACTCTCTGGAAAAGTCACCTGAAGGCACGTaGTTTCCCTCTCCATCTGTCCCAGAGATCTGCTTTAAAAGAATG +
Preference number: 6 (lower is better)
Translates to: RWASAHSLEKSPEGT*FPSPSVPEICFKRM
Trigger: CATTCTTTTAAAGCAGATCTCTGGGACAGATGGAGAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAGCCCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586709.1
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp TTCTTTCACTTGTCTCTGAATGGCTCCCAAAGCTCTCTCGTTTTCTaGGTTCAAGCCATTTGCCTGCTTGGCTTGGGCAGCTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: FFHLSLNGSQSSLVF*VQAICLLGLGSCLL
Trigger: CAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAGAGAGCTTTGGGAGCCATTCAGAGACAAGTGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp AGAGCTGCGACTCCCTTTTATCAGCTTCTGCTTCTCTaGGGTGCTTTCCAAAGTTCCTGTTCCGCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: RAATPFYQLLLL*GAFQSSCSAVP
Trigger: GGGAACTGCGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586709.1
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp CATACCAGAAGGAATCGGGCCATGTGTCCCTTGAGCTaGATGTCTGCATCTGCCAATAGCTCATACATGGCG +
Preference number: 6 (lower is better)
Translates to: HTRRNRAMCPLS*MSASANSSYMA
Trigger: CGCCATGTATGAGCTATTGGCAGATGCAGACATTCAGCTCAAGGGACACATGGCCCGATTCCTTCTGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591749.1
CDS GCA 72 bp GCTCTTCACATTCACATCAACCACAAACAGCTGAGCTaGCTCCGTGGAATACTCGACCACAACCACGTAGTG +
Preference number: 6 (lower is better)
Translates to: ALHIHINHKQLS*LRGILDHNHVV
Trigger: CACTACGTGGTTGTGGTCGAGTATTCCACGGAGGCAGCTCAGCTGTTTGTGGTTGATGTGAATGTGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS GCA 72 bp GAATGTCTGCATCTGCCAATAGCTCATACATGGCGATaGGGCTCATGTGATCAATCACAGCACTCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: ECLHLPIAHTWR*GSCDQSQHSGR
Trigger: TCTGCCGGAGTGCTGTGATTGATCACATGAGCCGCATCGCCATGTATGAGCTATTGGCAGATGCAGACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000591749.1
CDS CCA 72 bp CAGCAGCGATCACACGTCTCCCCACAGGTGTGGTGCTaGCATTCACACCGAAACAGTTTTTCAGGATTGTTT +
Preference number: 6 (lower is better)
Translates to: QQRSHVSPQVWC*HSHRNSFSGLF
Trigger: AAACAATCCTGAAAAACTGTTTCGGTGTGAATGCCAGCACCACACCTGTGGGGAGACGTGTGATCGCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 72 bp GTAAAAATGGATGACAAAGACGTATCGGCCCAGGTGTaGTACACGTCCTCTCAGGGTCACTTGATTCTGCGG +
Preference number: 6 (lower is better)
Translates to: VKMDDKDVSAQV*YTSSQGHLILR
Trigger: CCGCAGAATCAAGTGACCCTGAGAGGACGTGTACCACACCTGGGCCGATACGTCTTTGTCATCCATTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp CTGAATTGTCTGTCCAAAGGTTGGGATGGGAGCATGTaGTTGAGTTGGAACTCGAGCATAGCCCGTACCTTC +
Preference number: 6 (lower is better)
Translates to: LNCLSKGWDGSM*LSWNSSIARTF
Trigger: GAAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp TCTATCCACGGTGGTCTGAATTGTCTGTCCAAAGGTTaGGATGGGAGCATGTGGTTGAGTTGGAACTCGAGC +
Preference number: 6 (lower is better)
Translates to: SIHGGLNCLSKG*DGSMWLSWNSS
Trigger: GCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp GGTGAATTTCCTTGCTGTGAAATAGGCTTGGGTTACTaGTCAGGACAACCATTCAGACTGACAGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GEFPCCEIGLGY*SGQPFRLTGPW
Trigger: CCAGGGGCCTGTCAGTCTGAATGGTTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCAAGGAAATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp CAATTGCACACTTCTCACAGTTGTCTCCGTGGAAATTaGGCTTGCAGTGACAGCGGCCTGAACCCTGTTCAC +
Preference number: 6 (lower is better)
Translates to: QLHTSHSCLRGN*ACSDSGLNPVH
Trigger: GTGAACAGGGTTCAGGCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTGCAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 72 bp TCAGCCCACTCTCTGGAAAAGTCACCTGAAGGCACGTaGTTTCCCTCTCCATCTGTCCCAGAGATCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SAHSLEKSPEGT*FPSPSVPEICF
Trigger: AAAGCAGATCTCTGGGACAGATGGAGAGGGAAACAACGTGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586709.1
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp GCTGCCTCCTGCAGCCGAGCACGAAGGTCACTGAGTTaGGCTTCGTATTCATTTAAAGAATCCCGGATACTG +
Preference number: 6 (lower is better)
Translates to: AASCSRARRSLS*ASYSFKESRIL
Trigger: CAGTATCCGGGATTCTTTAAATGAATACGAAGCCAAACTCAGTGACCTTCGTGCTCGGCTGCAGGAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp GGGTTGAGCCCATCCAGAACCTCATCTGTGATGTCGTaGGCCTTTCTGACCATGCTCTTTGCACTACTGATC +
Preference number: 6 (lower is better)
Translates to: GLSPSRTSSVMS*AFLTMLFALLI
Trigger: GATCAGTAGTGCAAAGAGCATGGTCAGAAAGGCCAACGACATCACAGATGAGGTTCTGGATGGGCTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS CAA 72 bp GGGTCTAAACTCCACATAACTCGCTTGCAGTTGACTTaGACCGGGAGGCTGAAGAAATGGCACCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: GSKLHITRLQLT*TGRLKKWHPLL
Trigger: CAGCAAAGGGTGCCATTTCTTCAGCCTCCCGGTCAAAGTCAACTGCAAGCGAGTTATGTGGAGTTTAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000587184.5
CDS CAA 72 bp ACAACCCTGGCTGGGTCTAAACTCCACATAACTCGCTaGCAGTTGACTTTGACCGGGAGGCTGAAGAAATGG +
Preference number: 6 (lower is better)
Translates to: TTLAGSKLHITR*QLTLTGRLKKW
Trigger: CCATTTCTTCAGCCTCCCGGTCAAAGTCAACTGCAAGCGAGTTATGTGGAGTTTAGACCCAGCCAGGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269217.11
ENST00000587184.5
CDS CAA 72 bp GCGGGTCTCGTGCAGCACATGTTGACAAAGCTGACTTaGTTAACTGGACCAAAGAGATACCCTTCCCATGGG +
Preference number: 6 (lower is better)
Translates to: AGLVQHMLTKLT*LTGPKRYPSHG
Trigger: CCCATGGGAAGGGTATCTCTTTGGTCCAGTTAACAAAGTCAGCTTTGTCAACATGTGCTGCACGAGACCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS CAA 90 bp GTCTGGATGGGGTTGAGCCCATCCAGAACCTCATCTGTGATGTCGTaGGCCTTTCTGACCATGCTCTTTGCACTACTGATCATAGCATCA +
Preference number: 6 (lower is better)
Translates to: VWMGLSPSRTSSVMS*AFLTMLFALLIIAS
Trigger: TGATGCTATGATCAGTAGTGCAAAGAGCATGGTCAGAAAGGCCAACGACATCACAGATGAGGTTCTGGATGGGCTCAACCCCATCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS TCA 72 bp GGTACAACCCTTGAGATTGGCTGGGTCCAAATGGAATaGGCCTTCTCGACACACATTACACTCTGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: GTTLEIGWVQME*AFSTHITLCAF
Trigger: GAAGGCACAGAGTGTAATGTGTGTCGAGAAGGCTCATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS TCA 72 bp CATTTGGCAGTCGGACTTCGACTCCAGATTTACCATTaGACCTCATGGGGACAGCAACCTTACTGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: HLAVGLRLQIYH*TSWGQQPYWQH
Trigger: ATGCTGCCAGTAAGGTTGCTGTCCCCATGAGGTTCAATGGTAAATCTGGAGTCGAAGTCCGACTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp TCTGCAAAGAACAGCAAGCCTCTATCCACGGTGGTCTaGATTGTCTGTCCAAAGGTTGGGATGGGAGCATGT +
Preference number: 6 (lower is better)
Translates to: SAKNSKPLSTVV*IVCPKVGMGAC
Trigger: ACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTGTTCTTTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp AATGGAATGAGCCTTCTCGACACACATTACACTCTGTaGCTTCTACATTTTCCTTGCAGAGGCAAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: NGMSLLDTHYTL*LLHFPCRGKPR
Trigger: CCGGGGCTTGCCTCTGCAAGGAAAATGTAGAAGGCACAGAGTGTAATGTGTGTCGAGAAGGCTCATTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS GCA 72 bp GTTCAGCAAGAGCTGCGACTCCCTTTTATCAGCTTCTaGTTCTCTGAGGTGCTTTCCAAAGTTCCTGTTCCG +
Preference number: 6 (lower is better)
Translates to: VQQELRLPFISF*FSEVLSKVPVP
Trigger: CGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCTTGCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000586751.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp GTCCTTTATGCTGTAATAATACCGCCGAGTGACAGTTaGATCTCGCTGGGCTTTGGAGATGAGGTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: VLYAVIIPPSDS*ISLGFGDEVSK
Trigger: CTTGGACACCTCATCTCCAAAGCCCAGCGAGATCCAACTGTCACTCGGCGGTATTATTACAGCATAAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CCA 72 bp CTACACTCTCCAGTTCCACTCACTGTTCCCGCCTTATaGCACTTGCATTCTGAACATCCACTGGGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: LHSPVPLTVPAL*HLHSEHPLGFS
Trigger: AGAAAACCCCAGTGGATGTTCAGAATGCAAGTGCCATAAGGCGGGAACAGTGAGTGGAACTGGAGAGTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp GTCTGCAAAACCATTTCCAGGGACAGTGACAAAGGCTaGCTCCTTACTCGGCAGGAAGATGATCTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: VCKTISRDSDKG*LLTRQEDDLFA
Trigger: AGCAAAGAGATCATCTTCCTGCCGAGTAAGGAGCCAGCCTTTGTCACTGTCCCTGGAAATGGTTTTGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp AGTGTCTGGCCTCACAAGCCAGGGTACAGGGGAATCTaGTCACTGGCAAATGCTGGTAGAGTAAGCAATTTT +
Preference number: 6 (lower is better)
Translates to: SVWPHKPGYRGI*SLANAGRVSNF
Trigger: AAAATTGCTTACTCTACCAGCATTTGCCAGTGACCAGATTCCCCTGTACCCTGGCTTGTGAGGCCAGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp CAGCTGGTACAACCCTTGAGATTGGCTGGGTCCAAATaGAATGAGCCTTCTCGACACACATTACACTCTGTG +
Preference number: 6 (lower is better)
Translates to: QLVQPLRLAGSK*NEPSRHTLHSV
Trigger: CACAGAGTGTAATGTGTGTCGAGAAGGCTCATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp TTACAACTGCATGGTTGGCAGCTACCTCCGAATTTCTaGGGATTCCCGAAATATCCCGGTGCACACCTTTCA +
Preference number: 6 (lower is better)
Translates to: LQLHGWQLPPNF*GFPKYPGAHLS
Trigger: TGAAAGGTGTGCACCGGGATATTTCGGGAATCCCCAGAAATTCGGAGGTAGCTGCCAACCATGCAGTTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 72 bp ACCTCATGGGGACAGCAACCTTACTGGCAGCATCTCTaGCCTGCTGAATTAGTTCTCGTATTCTGTCCATGT +
Preference number: 6 (lower is better)
Translates to: TSWGQQPYWQHL*PAELVLVFCPC
Trigger: ACATGGACAGAATACGAGAACTAATTCAGCAGGCCAGAGATGCTGCCAGTAAGGTTGCTGTCCCCATGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp CGTTTTCTGCAAAGAACAGCAAGCCTCTATCCACGGTaGTCTGAATTGTCTGTCCAAAGGTTGGGATGGGAG +
Preference number: 6 (lower is better)
Translates to: RFLQRTASLYPR*SELSVQRLGWE
Trigger: CTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTGTTCTTTGCAGAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp CGCGCGTGCTTTTCTGCCTCCTCCACAAGGGATGTTTaGCCAGCAGATCTGGAAAGTTCTCTTACTTTGTCA +
Preference number: 6 (lower is better)
Translates to: RACFSASSTRDV*PADLESSLTLS
Trigger: TGACAAAGTAAGAGAACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGGAGGAGGCAGAAAAGCACGCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp TTCACCCGATCCATAACTGCCTCCTTAGTCTCACTCTaGGTCAAGATCTGGTCCACTTGGAGTTCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: FTRSITASLVSL*VKIWSTWSSAS
Trigger: TGAGGCTGAACTCCAAGTGGACCAGATCTTGACCAAGAGTGAGACTAAGGAGGCAGTTATGGATCGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp CAAAGAACAGCAAGCCTCTATCCACGGTGGTCTGAATaGTCTGTCCAAAGGTTGGGATGGGAGCATGTGGTT +
Preference number: 6 (lower is better)
Translates to: QRTASLYPRWSE*SVQRLGWEHVV
Trigger: AACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTGTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp CTCTGGACAAAAACATTGCTAATACAACCCTCAAAATaGCTCCCGCCCAGACGCAGAGACTGCCGGGAACTT +
Preference number: 6 (lower is better)
Translates to: LWTKTLLIQPSK*LPPRRRDCREL
Trigger: AAGTTCCCGGCAGTCTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000592442.1
ENST00000649721.1
CDS CAA 90 bp GGTGAGGGAAAGGCCTGCCACTTAGAACATCCAAAATTAATGCTGTaGGAGGAGTTTCATGGGCCAAGGAGACACAGGTGGCACTTTGAT +
Preference number: 6 (lower is better)
Translates to: GEGKACHLEHPKLML*EEFHGPRRHRWHFD
Trigger: ATCAAAGTGCCACCTGTGTCTCCTTGGCCCATGAAACTCCTCCAACAGCATTAATTTTGGATGTTCTAAGTGGCAGGCCTTTCCCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 90 bp GCTTCGTATTCATTTAAAGAATCCCGGATACTGTTAGCAAGCCCATaGTTCTCCCCCTGGTGGGTTTTCTGCCAGGTCCTTATCCGGTTC +
Preference number: 6 (lower is better)
Translates to: ASYSFKESRILLASP*FSPWWVFCQVLIRF
Trigger: GAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCGGGATTCTTTAAATGAATACGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp CGTTTTCTGCAAAGAACAGCAAGCCTCTATCCACGGTGGTCTGAATaGTCTGTCCAAAGGTTGGGATGGGAGCATGTGGTTGAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: RFLQRTASLYPRWSE*SVQRLGWEHVVELE
Trigger: TTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTGTTCTTTGCAGAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp CCCAGACGCAGAGACTGCCGGGAACTTGAAATGTGTTTTAGCCTTTaGCTATTTCTCAGAAGCTGGTCATCGATGAGAAGCCGTAGTCCA +
Preference number: 6 (lower is better)
Translates to: PRRRDCRELEMCFSL*LFLRSWSSMRSRSP
Trigger: TGGACTACGGCTTCTCATCGATGACCAGCTTCTGAGAAATAGCAAAAGGCTAAAACACATTTCAAGTTCCCGGCAGTCTCTGCGTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000592442.1
ENST00000649721.1
CDS TCA 72 bp CAAATCAGTGAAACTCAATTGTCCTCCTCTGGAGAATaGGGCAGATCGCACAAGCTTCCAGTCTTCCGAGCA +
Preference number: 6 (lower is better)
Translates to: QISETQLSSSGE*GRSHKLPVFRA
Trigger: TGCTCGGAAGACTGGAAGCTTGTGCGATCTGCCTCATTCTCCAGAGGAGGACAATTGAGTTTCACTGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp AGAAGCATACCAGAAGGAATCGGGCCATGTGTCCCTTaGGCTGAATGTCTGCATCTGCCAATAGCTCATACA +
Preference number: 6 (lower is better)
Translates to: RSIPEGIGPCVP*AECLHLPIAHT
Trigger: TGTATGAGCTATTGGCAGATGCAGACATTCAGCTCAAGGGACACATGGCCCGATTCCTTCTGGTATGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591749.1
CDS GCA 72 bp CATTTGGGCATATCCTCTCCAGCTAAACTCAGGAAATaGCAGCGGATCAAATCCAAATCGAAGGTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: HLGISSPAKLRK*QRIKSKSKVSP
Trigger: GGGAGAGACCTTCGATTTGGATTTGATCCGCTGGCATTTCCTGAGTTTAGCTGGAGAGGATATGCCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp CGCAATCATCACATTCTTCTGCAGGGCTGCTATCTTTaGGTTCTTGGTTTATGCAGTCTCCAGTCAGGGGAT +
Preference number: 6 (lower is better)
Translates to: RNHHILLQGCYL*VLGLCSLQSGD
Trigger: ATCCCCTGACTGGAGACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTGCAGAAGAATGTGATGATTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CCA 72 bp GACTTTGTTAACTGGACCAAAGAGATACCCTTCCCATaGGCAGGCCGTTCTCATCAGTTACCCACAAAGAGA +
Preference number: 6 (lower is better)
Translates to: DFVNWTKEIPFP*AGRSHQLPTKR
Trigger: TCTCTTTGTGGGTAACTGATGAGAACGGCCTGCCCATGGGAAGGGTATCTCTTTGGTCCAGTTAACAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS CAA 72 bp AAGGCCTGCCACTTAGAACATCCAAAATTAATGCTGTaGGAGGAGTTTCATGGGCCAAGGAGACACAGGTGG +
Preference number: 6 (lower is better)
Translates to: KACHLEHPKLML*EEFHGPRRHRW
Trigger: CCACCTGTGTCTCCTTGGCCCATGAAACTCCTCCAACAGCATTAATTTTGGATGTTCTAAGTGGCAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp ACTCCAAAACAGAAACAGCTGGTACAACCCTTGAGATaGGCTGGGTCCAAATGGAATGAGCCTTCTCGACAC +
Preference number: 6 (lower is better)
Translates to: TPKQKQLVQPLR*AGSKWNEPSRH
Trigger: GTGTCGAGAAGGCTCATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCTGTTTCTGTTTTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp ATCACATTCTTCTGCAGGGCTGCTATCTTTGGGTTCTaGGTTTATGCAGTCTCCAGTCAGGGGATGACAGCT +
Preference number: 6 (lower is better)
Translates to: ITFFCRAAIFGF*VYAVSSQGMTA
Trigger: AGCTGTCATCCCCTGACTGGAGACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTGCAGAAGAATGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CAA 72 bp TCGCAATCATCACATTCTTCTGCAGGGCTGCTATCTTaGGGTTCTTGGTTTATGCAGTCTCCAGTCAGGGGA +
Preference number: 6 (lower is better)
Translates to: SQSSHSSAGLLS*GSWFMQSPVRG
Trigger: TCCCCTGACTGGAGACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTGCAGAAGAATGTGATGATTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS CAA 72 bp TCATTTAAAGAATCCCGGATACTGTTAGCAAGCCCATaGTTCTCCCCCTGGTGGGTTTTCTGCCAGGTCCTT +
Preference number: 6 (lower is better)
Translates to: SFKESRILLASP*FSPWWVFCQVL
Trigger: AAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTTGCTAACAGTATCCGGGATTCTTTAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp GTGTCCTTAATTCTTTCCACATCTGTCTGGATGGGGTaGAGCCCATCCAGAACCTCATCTGTGATGTCGTTG +
Preference number: 6 (lower is better)
Translates to: VSLILSTSVWMG*SPSRTSSVMSL
Trigger: CAACGACATCACAGATGAGGTTCTGGATGGGCTCAACCCCATCCAGACAGATGTGGAAAGAATTAAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS CAA 72 bp AATTGTCTGTCCAAAGGTTGGGATGGGAGCATGTGGTaGAGTTGGAACTCGAGCATAGCCCGTACCTTCAAA +
Preference number: 6 (lower is better)
Translates to: NCLSKGWDGSMW*SWNSSIARTFK
Trigger: TTTGAAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp GTTGGATCTCGCTGGGCTTTGGAGATGAGGTGTCCAAGAAGCGTATaGGTTCTAAGAAAACGCAAGCGGATGTTTGTTGCCTTGGTAAAC +
Preference number: 6 (lower is better)
Translates to: VGSRWALEMRCPRSV*VLRKRKRMFVALVN
Trigger: GTTTACCAAGGCAACAAACATCCGCTTGCGTTTTCTTAGAACCAATACGCTTCTTGGACACCTCATCTCCAAAGCCCAGCGAGATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 90 bp TGTAAGGACCGCGCGTGCTTTTCTGCCTCCTCCACAAGGGATGTTTaGCCAGCAGATCTGGAAAGTTCTCTTACTTTGTCACTTAGTTCT +
Preference number: 6 (lower is better)
Translates to: CKDRACFSASSTRDV*PADLESSLTLSLSS
Trigger: AGAACTAAGTGACAAAGTAAGAGAACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGGAGGAGGCAGAAAAGCACGCGCGGTCCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp AGCAGGAAGACACCCCGAAGCTTGAAGAAGGGGTATACAAGGGTTTaGAATCCAGCTGAAAGTTCTTCAGGCATCCCACAAAGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SRKTPRSLKKGYTRV*NPAESSSGIPQSCL
Trigger: CAAACAGCTTTGTGGGATGCCTGAAGAACTTTCAGCTGGATTCAAAACCCTTGTATACCCCTTCTTCAAGCTTCGGGGTGTCTTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp ATCACCTACCTCTGGACAAAAACATTGCTAATACAACCCTCAAAATaGCTCCCGCCCAGACGCAGAGACTGCCGGGAACTTGAAATGTGT +
Preference number: 6 (lower is better)
Translates to: ITYLWTKTLLIQPSK*LPPRRRDCRELEMC
Trigger: ACACATTTCAAGTTCCCGGCAGTCTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAGGTAGGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS CAA 90 bp TCAGTTACCCACAAAGAGAGGATCACCTACCTCTGGACAAAAACATaGCTAATACAACCCTCAAAATTGCTCCCGCCCAGACGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: SVTHKERITYLWTKT*LIQPSKLLPPRRRD
Trigger: GTCTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAGGTAGGTGATCCTCTCTTTGTGGGTAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS CAA 90 bp AGTGATAACCTCTGGACAAAAACATTGCTAATACAACCCTCAAAATaGCTCCCGCCCAGACGCAGAGACTGCCGGGAACTTGAAATGTGT +
Preference number: 6 (lower is better)
Translates to: SDNLWTKTLLIQPSK*LPPRRRDCRELEMC
Trigger: ACACATTTCAAGTTCCCGGCAGTCTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAGGTTATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp AAACTTGATGCAGAAGGAATCGGGCCATGTGTCCCTTaGGCTGAATGTCTGCATCTGCCAATAGCTCATACA +
Preference number: 6 (lower is better)
Translates to: KLDAEGIGPCVP*AECLHLPIAHT
Trigger: TGTATGAGCTATTGGCAGATGCAGACATTCAGCTCAAGGGACACATGGCCCGATTCCTTCTGCATCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS TCA 72 bp CGCTGGTGCTCAATTCAATGTAACCATCTTCCAGAGTaGCCTGCAGGTTCCTTGTCCATGTCTGATGATCTA +
Preference number: 6 (lower is better)
Translates to: RWCSIQCNHLPE*PAGSLSMSDDL
Trigger: TAGATCATCAGACATGGACAAGGAACCTGCAGGTCACTCTGGAAGATGGTTACATTGAATTGAGCACCAGCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588164.2
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp TGTTTAAACTGCAGCCTCCCAGGGACACATCTCTCTTaGGAGAGTTACTGGTCAAATCTAGGACTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: CLNCSLPGTHLS*ESYWSNLGLQD
Trigger: GTCCTGAAGTCCTAGATTTGACCAGTAACTCTCTCAAGAGAGATGTGTCCCTGGGAGGCTGCAGTTTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp CCCATCTGTCCCCAGTGCAAAGACCAGACGTCCTTTTaGAAGATAAAGAGCCATAAAGGAGTTCTTAGTGCC +
Preference number: 6 (lower is better)
Translates to: PICPQCKDQTSF*KIKSHKGVLSA
Trigger: GGCACTAAGAACTCCTTTATGGCTCTTTATCTTTCAAAAGGACGTCTGGTCTTTGCACTGGGGACAGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp ACGTTCAGATCCATCGATGGCATTGGTGACAGGATGTaGTTTCCTGGGGTCTTCAGAATTGCAATAGTCACA +
Preference number: 6 (lower is better)
Translates to: TFRSIDGIGDRM*FPGVFRIAIVT
Trigger: TGTGACTATTGCAATTCTGAAGACCCCAGGAAAGCACATCCTGTCACCAATGCCATCGATGGATCTGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp AGCCATCCTGGCATTGATTTGAATGTCCGTTGCAATTaGAGGGAACACACCGTCCGGTATACAAGCCTTTAT +
Preference number: 6 (lower is better)
Translates to: SHPGIDLNVRCN*REHTVRYTSLY
Trigger: ATAAAGGCTTGTATACCGGACGGTGTGTTCCCTGCAATTGCAACGGACATTCAAATCAATGCCAGGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000649721.1
CDS GCA 72 bp CCCCCTAACATTACTGAGAATGAGTCTTTTTCCTTGTaGTATGCACCCAGGTACTTGACACAGCCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: PPNITENESFSL*YAPRYLTQPLR
Trigger: CCTCAAAGGCTGTGTCAAGTACCTGGGTGCATAGCACAAGGAAAAAGACTCATTCTCAGTAATGTTAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS GCA 72 bp ATTCTTACAGAGCTGCGACTCCCTTTTATCAGCTTCTaGTTCTCTGAGGTGCTTTCCAAAGTTCCTGTTCCG +
Preference number: 6 (lower is better)
Translates to: ILTELRLPFISF*FSEVLSKVPVP
Trigger: CGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCTGTAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586709.1
CDS GCA 72 bp ACTGGATGCAAGAATTTGGGAGCATTCTTACAGAGCTaGGACTCCCTTTTATCAGCTTCTGCTTCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: TGCKNLGAFLQS*DSLLSASASLR
Trigger: CCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAGCTCTGTAAGAATGCTCCCAAATTCTTGCATCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586709.1
CDS CCA 72 bp CTGTCCAAAGGTTGGGATGGGAGCATGTGGTTGAGTTaGAACTCGAGCATAGCCCGTACCTTCAAAATAATT +
Preference number: 6 (lower is better)
Translates to: LSKGWDGSMWLS*NSSIARTFKII
Trigger: AATTATTTTGAAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp GCACCCCCTAACATTACTGAGAATGAGTCTTTTTCCTaGTGCTATGCACCCAGGTACTTGACACAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: APPNITENESFS*CYAPRYLTQPL
Trigger: CAAAGGCTGTGTCAAGTACCTGGGTGCATAGCACAAGGAAAAAGACTCATTCTCAGTAATGTTAGGGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592519.1
CDS CAA 72 bp GAAAGACTGTGGTATGCGGGTCTCGTGCAGCACATGTaGACAAAGCTGACTTTGTTAACTGGACCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: ERLWYAGLVQHM*TKLTLLTGPKR
Trigger: TCTCTTTGGTCCAGTTAACAAAGTCAGCTTTGTCAACATGTGCTGCACGAGACCCGCATACCACAGTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS CAA 90 bp GGTGGTCTGAATTGTCTGTCCAAAGGTTGGGATGGGAGCATGTGGTaGAGTTGGAACTCGAGCATAGCCCGTACCTTCAAAATAATTTTT +
Preference number: 6 (lower is better)
Translates to: GGLNCLSKGWDGSMW*SWNSSIARTFKIIF
Trigger: AAAAATTATTTTGAAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGACCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp TTTTTGATCCATGATTTGAAATGGCAGAACGGTAGTTaGGCAACTGATTCCTCAGGTCCTTGGCCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: FLIHDLKWQNGS*ATDSSGPWPGS
Trigger: AGACCCAGGCCAAGGACCTGAGGAATCAGTTGCTCAACTACCGTTCTGCCATTTCAAATCATGGATCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000649721.1
CDS GCA 72 bp CGTATTGGTTCTAAGAAAACGCAAGCGGATGTTTGTTaGCTTGGTAAACTCCCTCAGGGTGTGAGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: RIGSKKTQADVC*LGKLPQGVRES
Trigger: ACTTTCTCTCACACCCTGAGGGAGTTTACCAAGGCAACAAACATCCGCTTGCGTTTTCTTAGAACCAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS GCA 72 bp TGGCTTTTCTCCATCAGCTGCAGCGCAATGTTGGTTTaGAACAAAGATGAGTCTGCAGTGGTTAGATACTTG +
Preference number: 6 (lower is better)
Translates to: WLFSISCSAMLV*NKDESAVVRYL
Trigger: CAAGTATCTAACCACTGCAGACTCATCTTTGTTGCAAACCAACATTGCGCTGCAGCTGATGGAGAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp CATGTTGTCAGAGATGTTTCCCAAGGGCAACAGCTGTaGGTTGATACTTTCAATCTTGCGCCAAAGATCAGG +
Preference number: 6 (lower is better)
Translates to: HVVRDVSQGQQL*VDTFNLAPKIR
Trigger: CCTGATCTTTGGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTGGGAAACATCTCTGACAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp GCAGATCGCACAAGCTTCCAGTCTTCCGAGCACTTTTaGGTTACTCCCACAGTATCATTCAATCTAACGACA +
Preference number: 6 (lower is better)
Translates to: ADRTSFQSSEHF*VTPTVSFNLTT
Trigger: TGTCGTTAGATTGAATGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAGACTGGAAGCTTGTGCGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp CTGTCCATGTTGTCAGAGATGTTTCCCAAGGGCAACAGCTGTTGGTaGATACTTTCAATCTTGCGCCAAAGATCAGGTAGTTTGTTGGTT +
Preference number: 6 (lower is better)
Translates to: LSMLSEMFPKGNSCW*ILSILRQRSGSLLV
Trigger: AACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTGGGAAACATCTCTGACAACATGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp TCTGAATTGTCTGTCCAAAGGTTGGGATGGGAGCATGTGGTTGAGTaGGAACTCGAGCATAGCCCGTACCTTCAAAATAATTTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: SELSVQRLGWEHVVE*ELEHSPYLQNNFCL
Trigger: CAGACAAAAATTATTTTGAAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCAACCTTTGGACAGACAATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp CTCTCTGTATCCCATGAAGACCATCTCGGAGAGTTGTaGGATTGGTGTCTATCACTTCTTTCTGAACTGTCA +
Preference number: 6 (lower is better)
Translates to: LSVSHEDHLGEL*DWCLSLLSELS
Trigger: TGACAGTTCAGAAAGAAGTGATAGACACCAATCTCACAACTCTCCGAGATGGTCTTCATGGGATACAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS TCA 72 bp CTGATCATAGCATCAATATCACCTCTCTGTATCCCATaGAGACCATCTCGGAGAGTTGTGAGATTGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LIIASISPLCIP*RPSRRVVRLVS
Trigger: AGACACCAATCTCACAACTCTCCGAGATGGTCTTCATGGGATACAGAGAGGTGATATTGATGCTATGATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS GCA 72 bp ATCTGTGATGTCGTTGGCCTTTCTGACCATGCTCTTTaGACTACTGATCATAGCATCAATATCACCTCTCTG +
Preference number: 6 (lower is better)
Translates to: ICDVVGLSDHAL*TTDHSINITSL
Trigger: CAGAGAGGTGATATTGATGCTATGATCAGTAGTGCAAAGAGCATGGTCAGAAAGGCCAACGACATCACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS CAA 72 bp TCAGGATTGTTTATATTGCACACTTCAGCATGGCCATaGCAAACACACTGCCCACCAATGCTGATGTCCTTT +
Preference number: 6 (lower is better)
Translates to: SGLFILHTSAWP*QTHCPPMLMSF
Trigger: AAAGGACATCAGCATTGGTGGGCAGTGTGTTTGCAATGGCCATGCTGAAGTGTGCAATATAAACAATCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 72 bp TGGCACTTGCATTCTGAACATCCACTGGGGTTTTCTTaGTCCAGATTCCAATATAACAGTTTGCAGCGGCTA +
Preference number: 6 (lower is better)
Translates to: WHLHSEHPLGFS*SRFQYNSLQRL
Trigger: TAGCCGCTGCAAACTGTTATATTGGAATCTGGACAAAGAAAACCCCAGTGGATGTTCAGAATGCAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CAA 72 bp TTGTCAGAGATGTTTCCCAAGGGCAACAGCTGTTGGTaGATACTTTCAATCTTGCGCCAAAGATCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: LSEMFPKGNSCW*ILSILRQRSGS
Trigger: ACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTGGGAAACATCTCTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp AGAGACTGCCGGGAACTTGAAATGTGTTTTAGCCTTTaGCTATTTCTCAGAAGCTGGTCATCGATGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RDCRELEMCFSL*LFLRSWSSMRS
Trigger: GCTTCTCATCGATGACCAGCTTCTGAGAAATAGCAAAAGGCTAAAACACATTTCAAGTTCCCGGCAGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000592442.1
ENST00000649721.1
CDS CAA 72 bp GGTGTGTCCTGCAACAGCTGGTTGATACGAAAAGTCTaGGTCTTGTTAAACCTGGTAGAACCTTTAAGCAAC +
Preference number: 6 (lower is better)
Translates to: GVSCNSWLIRKV*VLLNLVEPLSN
Trigger: GTTGCTTAAAGGTTCTACCAGGTTTAACAAGACCAAGACTTTTCGTATCAACCAGCTGTTGCAGGACACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp GCTTTTGAAGGTGAATTTCCTTGCTGTGAAATAGGCTaGGGTTACTGGTCAGGACAACCATTCAGACTGACA +
Preference number: 6 (lower is better)
Translates to: AFEGEFPCCEIG*GYWSGQPFRLT
Trigger: TGTCAGTCTGAATGGTTGTCCTGACCAGTAACCCAAGCCTATTTCACAGCAAGGAAATTCACCTTCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000588004.1
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp GAGATGTTTCCCAAGGGCAACAGCTGTTGGTTGATACTTTCAATCTaGCGCCAAAGATCAGGTAGTTTGTTGGTTAACTTATTCACCGAG +
Preference number: 6 (lower is better)
Translates to: EMFPKGNSCWLILSI*RQRSGSLLVNLFTE
Trigger: CTCGGTGAATAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTGGGAAACATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS GCA 72 bp CTGATAAATTCTCTGAAATTTCACCCGATCCATAACTaGCTCCTTAGTCTCACTCTTGGTCAAGATCTGGTC +
Preference number: 6 (lower is better)
Translates to: LINSLKFHPIHN*LLSLTLGQDLV
Trigger: GACCAGATCTTGACCAAGAGTGAGACTAAGGAGGCAGTTATGGATCGGGTGAAATTTCAGAGAATTTATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp GCAGGTTCCTTGTCCATGTCTGATGATCTAATAATATaGCACTGGGTTGAAAGGTCTGAAATCCAAATGAGG +
Preference number: 6 (lower is better)
Translates to: AGSLSMSDDLII*HWVERSEIQMR
Trigger: CCTCATTTGGATTTCAGACCTTTCAACCCAGTGGCATATTATTAGATCATCAGACATGGACAAGGAACCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588164.2
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp TTTATCACTGTTGGAACTCAGGGTTTTAGCTTTTCTTaGCAGATCTTCCTTTATCACTGTCTGGAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: FITVGTQGFSFS*QIFLYHCLEGR
Trigger: TCTGCCCTCCAGACAGTGATAAAGGAAGATCTGCCAAGAAAAGCTAAAACCCTGAGTTCCAACAGTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp ATTTCTACCATCCATGTCATAGACTCCGGGTGTTTCTaGTTTACTGGATGTGGCTCCTTTGGTGTAATTAAG +
Preference number: 6 (lower is better)
Translates to: ISTIHVIDSGCF*FTGCGSFGVIK
Trigger: CTTAATTACACCAAAGGAGCCACATCCAGTAAACCAGAAACACCCGGAGTCTATGACATGGATGGTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp TTATTTACTCCAAAACAGAAACAGCTGGTACAACCCTaGAGATTGGCTGGGTCCAAATGGAATGAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LFTPKQKQLVQP*RLAGSKWNEPS
Trigger: AGAAGGCTCATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCTGTTTCTGTTTTGGAGTAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CAA 72 bp CCCAAGGGCAACAGCTGTTGGTTGATACTTTCAATCTaGCGCCAAAGATCAGGTAGTTTGTTGGTTAACTTA +
Preference number: 6 (lower is better)
Translates to: PKGNSCWLILSI*RQRSGSLLVNL
Trigger: TAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp ACTGGTGTGTCCTGCAACAGCTGGTTGATACGAAAAGTCTTGGTCTaGTTAAACCTGGTAGAACCTTTAAGCAACATTAGAAAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: TGVSCNSWLIRKVLV*LNLVEPLSNIRKGG
Trigger: ACCACCTTTTCTAATGTTGCTTAAAGGTTCTACCAGGTTTAACAAGACCAAGACTTTTCGTATCAACCAGCTGTTGCAGGACACACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp GAGATGTTTCCCAAGGGCAACAGCTGTTGGTTGATACTTTCAATCTaGCGCCAAAGATCAGGTAGTTTGTTGGTTAACTTATTCACTTGC +
Preference number: 6 (lower is better)
Translates to: EMFPKGNSCWLILSI*RQRSGSLLVNLFTC
Trigger: GCAAGTGAATAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAACCAACAGCTGTTGCCCTTGGGAAACATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS TCA 72 bp GGCAATGCAGTGGACTTGTGGTCTCACATACTCAGCTaGGAATTCTTCAATAGGTATGATACAAACTTGATG +
Preference number: 6 (lower is better)
Translates to: GNAVDLWSHILS*EFFNRYDTNLM
Trigger: CATCAAGTTTGTATCATACCTATTGAAGAATTCTCAGCTGAGTATGTGAGACCACAAGTCCACTGCATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS GCA 72 bp ACCCCAGGATGGATAAATAGTTATATGGCCAGATACTaGTTCAGTTCCAGGGTTAACGTATCTCAGAATAAC +
Preference number: 6 (lower is better)
Translates to: TPGWINSYMARY*FSSRVNVSQNN
Trigger: GTTATTCTGAGATACGTTAACCCTGGAACTGAAGCAGTATCTGGCCATATAACTATTTATCCATCCTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp TTCTCAGTACCCCCATTTTCTCTTGAGTTGGGCCTTTaGAGAAACAAGGACAGAGATGTATATCCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: FSVPPFSLELGL*RNKDRDVYPFK
Trigger: TTTGAAAGGATATACATCTCTGTCCTTGTTTCTCCAAAGGCCCAACTCAAGAGAAAATGGGGGTACTGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp ACCTATAACGGGGAACTCTACATTGCACTCTGCACGTaGTGTTTCAAATCAATTAGAATGGACTGGATGCAA +
Preference number: 6 (lower is better)
Translates to: TYNGELYIALCT*CFKSIRMDWMQ
Trigger: TTGCATCCAGTCCATTCTAATTGATTTGAAACACAACGTGCAGAGTGCAATGTAGAGTTCCCCGTTATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586709.1
CDS CAA 90 bp GAAAAATGGGAATTCTCAAGCAAAATGGGAAATTGTAGTATCCAATaGCACACTTCTCACAGTTGTCTCCGTGGAAATTTGGCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: EKWEFSSKMGNCSIQ*HTSHSCLRGNLACS
Trigger: ACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTGCAATTGGATACTACAATTTCCCATTTTGCTTGAGAATTCCCATTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS CAA 90 bp GCAATGTTGGTTTGCAACAAAGATGAGTCTGCAGTGGTTAGATACTaGGTGAAATCACTCTGCAGGGAATTTATTTCTTTCACTTGTCTC +
Preference number: 6 (lower is better)
Translates to: AMLVCNKDESAVVRY*VKSLCREFISFTCL
Trigger: GAGACAAGTGAAAGAAATAAATTCCCTGCAGAGTGATTTCACCAAGTATCTAACCACTGCAGACTCATCTTTGTTGCAAACCAACATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp GTCACACCCTTTTATATCTCCAGCTACTGGATCTTCTaGACTTGGTGTAGAAACAGGAAAAATGGGAATTCT +
Preference number: 6 (lower is better)
Translates to: VTPFYISSYWIF*TWCRNRKNGNS
Trigger: AGAATTCCCATTTTTCCTGTTTCTACACCAAGTTCAGAAGATCCAGTAGCTGGAGATATAAAAGGGTGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 72 bp GCCCAGCATATCCACAAACTTAGTCCTTCGCTTATGTaGGCTGTGACATTGATTATTTACTCCAAAACAGAA +
Preference number: 6 (lower is better)
Translates to: AQHIHKLSPSLM*AVTLIIYSKTE
Trigger: TTCTGTTTTGGAGTAAATAATCAATGTCACAGCTCACATAAGCGAAGGACTAAGTTTGTGGATATGCTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000649721.1
CDS CCA 72 bp AATGTTATTCTTACATCATTCTGTACTGAGGTCATTTaGGCATATCCTCTCCAGCTAAACTCAGGAAATGCC +
Preference number: 6 (lower is better)
Translates to: NVILTSFCTEVI*AYPLQLNSGNA
Trigger: GGCATTTCCTGAGTTTAGCTGGAGAGGATATGCCCAAATGACCTCAGTACAGAATGATGTAAGAATAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313654.14
ENST00000399516.7
CDS CCA 72 bp TCATCAGTTACCCACAAAGAGAGGATCACCTACCTCTaGACAAAAACATTGCTAATACAACCCTCAAAATTG +
Preference number: 6 (lower is better)
Translates to: SSVTHKERITYL*TKTLLIQPSKL
Trigger: CAATTTTGAGGGTTGTATTAGCAATGTTTTTGTCCAGAGGTAGGTGATCCTCTCTTTGTGGGTAACTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592442.1
CDS CAA 72 bp TCCTGCAACAGCTGGTTGATACGAAAAGTCTTGGTCTaGTTAAACCTGGTAGAACCTTTAAGCAACATTAGA +
Preference number: 6 (lower is better)
Translates to: SCNSWLIRKVLV*LNLVEPLSNIR
Trigger: TCTAATGTTGCTTAAAGGTTCTACCAGGTTTAACAAGACCAAGACTTTTCGTATCAACCAGCTGTTGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 90 bp TTGAGAGCTGGACTGACTTCTTGCTTTAGCTTCTTTTGTGTCATCTaGGCTTCATTTAACAGTTTATCACTGTTGGAACTCAGGGTTTTA +
Preference number: 6 (lower is better)
Translates to: LRAGLTSCFSFFCVI*ASFNSLSLLELRVL
Trigger: TAAAACCCTGAGTTCCAACAGTGATAAACTGTTAAATGAAGCCAAGATGACACAAAAGAAGCTAAAGCAAGAAGTCAGTCCAGCTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS TCA 72 bp ACAGTCTACTTTAGAATGAGCAAAATATTGCCATGGTaGGTAGGTGCTTCCAAAGTCTACAGATCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: TVYFRMSKILPW*VGASKVYRSFQ
Trigger: TTGGAAAGATCTGTAGACTTTGGAAGCACCTACTCACCATGGCAATATTTTGCTCATTCTAAAGTAGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313654.14
ENST00000399516.7
ENST00000585600.5
CDS TCA 72 bp GCAACAAAGATGAGTCTGCAGTGGTTAGATACTTGGTaGAATCACTCTGCAGGGAATTTATTTCTTTCACTT +
Preference number: 6 (lower is better)
Translates to: ATKMSLQWLDTW*NHSAGNLFLSL
Trigger: AAGTGAAAGAAATAAATTCCCTGCAGAGTGATTTCACCAAGTATCTAACCACTGCAGACTCATCTTTGTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS GCA 72 bp TTTACTGGATGTGGCTCCTTTGGTGTAATTAAGCCTTaGAAACTGATAAATTCTCTGAAATTTCACCCGATC +
Preference number: 6 (lower is better)
Translates to: FTGCGSFGVIKP*KLINSLKFHPI
Trigger: GATCGGGTGAAATTTCAGAGAATTTATCAGTTTGCAAGGCTTAATTACACCAAAGGAGCCACATCCAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp TACTTTCAATCTTGCGCCAAAGATCAGGTAGTTTGTTaGTTAACTTATTCACCGAGTTATCTGCATCAGTCA +
Preference number: 6 (lower is better)
Translates to: YFQSCAKDQVVC*LTYSPSYLHQS
Trigger: TGACTGATGCAGATAACTCGGTGAATAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS CAA 72 bp ATACTTTCAATCTTGCGCCAAAGATCAGGTAGTTTGTaGGTTAACTTATTCACCGAGTTATCTGCATCAGTC +
Preference number: 6 (lower is better)
Translates to: ILSILRQRSGSL*VNLFTELSASV
Trigger: GACTGATGCAGATAACTCGGTGAATAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS CAA 72 bp TTGATACTTTCAATCTTGCGCCAAAGATCAGGTAGTTaGTTGGTTAACTTATTCACCGAGTTATCTGCATCA +
Preference number: 6 (lower is better)
Translates to: LILSILRQRSGS*LVNLFTELSAS
Trigger: TGATGCAGATAACTCGGTGAATAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
CDS CAA 90 bp AAGCTCAGAACATTTTCATTGAGGTCATCTAATTCAATACAACCTTaGTATGGAGGGAAACTTAGTCGACTGGGAAGTTTAAAATCAGGT +
Preference number: 6 (lower is better)
Translates to: KLRTFSLRSSNSIQP*YGGKLSRLGSLKSG
Trigger: ACCTGATTTTAAACTTCCCAGTCGACTAAGTTTCCCTCCATACAAAGGTTGTATTGAATTAGATGACCTCAATGAAAATGTTCTGAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CCA 72 bp TACTTTCAATCTTGCGCCAAAGATCAGGTAGTTTGTTaGTTAACTTATTCACTTGCTTTAGCTTCTTTTGTG +
Preference number: 6 (lower is better)
Translates to: YFQSCAKDQVVC*LTYSLALASFV
Trigger: CACAAAAGAAGCTAAAGCAAGTGAATAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649721.1
CDS CAA 72 bp ACATTTTCATTGAGGTCATCTAATTCAATACAACCTTaGTATGGAGGGAAACTTAGTCGACTGGGAAGTTTA +
Preference number: 6 (lower is better)
Translates to: TFSLRSSNSIQP*YGGKLSRLGSL
Trigger: TAAACTTCCCAGTCGACTAAGTTTCCCTCCATACAAAGGTTGTATTGAATTAGATGACCTCAATGAAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS TCA 72 bp CTGAAATCAAATACTTCACCATCAATTATAGTGTTTTaGACGTCCACATTTATCCACATACGCTTTTGGAGT +
Preference number: 6 (lower is better)
Translates to: LKSNTSPSIIVF*TSTFIHIRFWS
Trigger: ACTCCAAAAGCGTATGTGGATAAATGTGGACGTTCAAAACACTATAATTGATGGTGAAGTATTTGATTTCAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269217.11
ENST00000313654.14
ENST00000399516.7
ENST00000586751.5
ENST00000587184.5
ENST00000588770.5
ENST00000649721.1
CDS CAA 72 bp TTGATACTTTCAATCTTGCGCCAAAGATCAGGTAGTTaGTTGGTTAACTTATTCACTTGCTTTAGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: LILSILRQRSGS*LVNLFTCFSFF
Trigger: AAAGAAGCTAAAGCAAGTGAATAAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649721.1