Pregenerated sensors for LALBA (Homo sapiens)
Ensembl gene IDs: ENSG00000167531Ensembl transcript IDs: ENST00000301046.6, ENST00000549817.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAACTGAGGTGGCATTAGGGAAGAGGTATTCCAGGAGTGTGGAGTaGGCAGGGGTGCCAAGGACAGCAGACACTCACAACTTCTCACAA | + |
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Preference number: 1 (lower is better) Translates to: QTEVALGKRYSRSVE*AGVPRTADTHNFSQ Trigger: TTGTGAGAAGTTGTGAGTGTCTGCTGTCCTTGGCACCCCTGCCCACTCCACACTCCTGGAATACCTCTTCCCTAATGCCACCTCAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| 3UTR CCA 90 bp | GCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCAGGCATCCCTaGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ALSKGLELSAPLRHP*KIVFKNSVMSLQGP Trigger: TGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| 3UTR TCA 90 bp | AAGTGGAAGAGCGTGGACGAGAATTACAGAAAGACATTCCTGGCCTaGTGTCAAGCGACACAAGCCATCAAGTGGAATACAGTCCATAAA | + |
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Preference number: 1 (lower is better) Translates to: KWKSVDENYRKTFLA*CQATQAIKWNTVHK Trigger: TTTATGGACTGTATTCCACTTGATGGCTTGTGTCGCTTGACATCAGGCCAGGAATGTCTTTCTGTAATTCTCGTCCACGCTCTTCCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| 3UTR-3UTR CCA 90 bp | GTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCAGGTATTCCAGGAGTGTaGAGTGGGCAGGGGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: VVKVPSKALSKGLELSAPGIPGV*SGQGCQ Trigger: TTGGCACCCCTGCCCACTCCACACTCCTGGAATACC...TGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAGGAGGGCTGAAGTGGAAGAGCGTGGACGAGAATTACAGAAAGACATTCGGGTCTAGAGCTCAGTaGACCACTCAGGCATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: FPGGLKWKSVDENYRKTFGSRAQ*TTQASL Trigger: CAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCC...GAATGTCTTTCTGTAATTCTCGTCCACGCTCTTCCACTTCAGCCCTCCTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| 3UTR-3UTR CCA 90 bp | GGAATTAGATGTCCAAGTCTAAGTGAAAGGAGGCCTGGGTCTGAGCCCTCCATTGGTATTCCAGGAGTGTaGAGTGGGCAGGGGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: GIRCPSLSERRPGSEPSIGIPGV*SGQGCQ Trigger: TTGGCACCCCTGCCCACTCCACACTCCTGGAATACC...AATGGAGGGCTCAGACCCAGGCCTCCTTTCACTTAGACTTGGACATCTAATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| 3UTR-3UTR CCA 90 bp | GTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCCCACTCAGGCATCCCTaGAAAATAGTCTTCAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VKVPSKALSKGLELSAPLPLRHP*KIVFKN Trigger: ATTCTTGAAGACTATTTTCCAGGGATGCCTGAGTGG...GAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTGGGACCTTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGAGAGGAAAGGGGTGCTaGGCTAATGGGGTAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: QSGTFIQDRGEICAVVKVRGKGC*ANGVRR Trigger: TCTCCTTACCCCATTAGCCCAGCACCCCTTTCCTCT...CACTTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAAGGTCCCACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| 3UTR CCA 72 bp | GGAAGAGCGTGGACGAGAATTACAGAAAGACATTCCTaGCCTGATGTCAAGCGACACAAGCCATCAAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: GRAWTRITERHS*PDVKRHKPSSG Trigger: TCCACTTGATGGCTTGTGTCGCTTGACATCAGGCCAGGAATGTCTTTCTGTAATTCTCGTCCACGCTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| 3UTR TCA 72 bp | AGCGTGGACGAGAATTACAGAAAGACATTCCTGGCCTaGTGTCAAGCGACACAAGCCATCAAGTGGAATACA | + |
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Preference number: 3 (lower is better) Translates to: SVDENYRKTFLA*CQATQAIKWNT Trigger: TGTATTCCACTTGATGGCTTGTGTCGCTTGACATCAGGCCAGGAATGTCTTTCTGTAATTCTCGTCCACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| 3UTR CCA 72 bp | AAGGGTCTAGAGCTCAGTGCACCACTCAGGCATCCCTaGAAAATAGTCTTCAAGAATTCGGTGATGTCACTA | + |
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Preference number: 3 (lower is better) Translates to: KGLELSAPLRHP*KIVFKNSVMSL Trigger: TAGTGACATCACCGAATTCTTGAAGACTATTTTCCAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | TCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCAGGCATCCCTGGGGTATTCCAGGAGTGTaGAGTGGGCAGGGGTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SKALSKGLELSAPLRHPWGIPGV*SGQGCQ Trigger: TTGGCACCCCTGCCCACTCCACACTCCTGGAATACC...CCAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | GTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCTGGCAGGGAACAGGATaGCCACCAGGAACAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VKVPSKALSKGLELSAPLWQGTG*PPGTEG Trigger: TCCCTCTGTTCCTGGTGGGCATCCTGTTCCCTGCCA...GAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | GCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCATGGAGTGGGCAGGGGTaGCAAGGACAGCAGACACTC | + |
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Preference number: 4 (lower is better) Translates to: AVVKVPSKALSKGLELSAWSGQG*QGQQTL Trigger: GAGTGTCTGCTGTCCTTGGCACCCCTGCCCACTCCA...TGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | GTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCAGGGTCTAGAGCTCAGTaGACCACTCAGGCATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VVKVPSKALSKGLELSAPGSRAQ*TTQASL Trigger: CAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCC...TGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | GCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCAGGGTCTAGAGCTCAGTaGACCACTCAGGCATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AVVKVPSKALSKGLELSAGSRAQ*TTQASL Trigger: CAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCC...TGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | TCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCAGGCATCCCTGGTCACATTTTGTGAATTaGTTGGCCAGGATGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SKALSKGLELSAPLRHPWSHFVN*LARMAG Trigger: CCCTGCCATCCTGGCCAAGCAATTCACAAAATGTGA...CCAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | GGGACCTTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGTGGAGTGGGCAGGGGTaGCAAGGACAGCAGACACTC | + |
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Preference number: 4 (lower is better) Translates to: GTFIQDRGEICAVVKVPSWSGQG*QGQQTL Trigger: GAGTGTCTGCTGTCCTTGGCACCCCTGCCCACTCCA...CGATGGCACTTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAAGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | GGAATTAGATGTCCAAGTCTAAGTGAAAGGAGGCCTGGGTCTGAGCCCTCCATTAAGACATTCCTGGCCTaGTGTCAAGCGACACAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GIRCPSLSERRPGSEPSIKTFLA*CQATQA Trigger: GGCTTGTGTCGCTTGACATCAGGCCAGGAATGTCTT...AATGGAGGGCTCAGACCCAGGCCTCCTTTCACTTAGACTTGGACATCTAATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | TGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGATGGCAGGGAACAGGATaGCCACCAGGAACAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: WKIVFKNSVMSLQGPRLRWQGTG*PPGTEG Trigger: TCCCTCTGTTCCTGGTGGGCATCCTGTTCCCTGCCA...TCTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | GTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCAACTGAGGGACCTGGCTaGTCTTGCACCAAAGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: VVKVPSKALSKGLELSAPTEGPG*SCTKAY Trigger: ATAAGCTTTGGTGCAAGAGCAGCCAGGTCCCTCAGT...TGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | GTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCACAGAAAGACATTCCTaGCCTGATGTCAAGCGACAC | + |
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Preference number: 4 (lower is better) Translates to: VKVPSKALSKGLELSAPLTERHS*PDVKRH Trigger: GTGTCGCTTGACATCAGGCCAGGAATGTCTTTCTGT...GAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | TTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGAAGGCACATTCCCAGGAGGGCTaGAGTGGAAGAGCGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: FIQDRGEICAVVKVPSKAHSQEG*SGRAWT Trigger: CGTCCACGCTCTTCCACTTCAGCCCTCCTGGGAATG...TGCCTTCGATGGCACTTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | GGGACCTTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGATTGCTTGGCCAGGATaGCAGGGAACAGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GTFIQDRGEICAVVKVPSIAWPG*QGTGCP Trigger: TGGGCATCCTGTTCCCTGCCATCCTGGCCAAGCAAT...CGATGGCACTTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAAGGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | AAAGACATTCCTGGCCTGATGTCAAGCGACACAAGCCATCAAGTGGAATACAGTATTGCTTGGCCAGGATaGCAGGGAACAGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KDIPGLMSSDTSHQVEYSIAWPG*QGTGCP Trigger: TGGGCATCCTGTTCCCTGCCATCCTGGCCAAGCAAT...ACTGTATTCCACTTGATGGCTTGTGTCGCTTGACATCAGGCCAGGAATGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | CTGAGCCCTCCATTAGGCAACCCCTTATTAGGAAAATTGCTACCAAGGAGCGGAGTGCAGAGGGCTTTATaGGCCAACCTGATAATGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSPPLGNPLLGKLLPRSGVQRAL*ANLIME Trigger: CTCCATTATCAGGTTGGCCCATAAAGCCCTCTGCAC...TCCGCTCCTTGGTAGCAATTTTCCTAATAAGGGGTTGCCTAATGGAGGGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | TCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCAGGCATCCCTGGACCAAAGCTTATTACTaGTCTGGAAGAGTCCATATT | + |
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Preference number: 4 (lower is better) Translates to: SKALSKGLELSAPLRHPWTKAYY*SGRVHI Trigger: AATATGGACTCTTCCAGATCAGTAATAAGCTTTGGT...CCAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | GACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGCTACCCCCAAGAACCTaGAATGGAAGCATCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: DRGEICAVVKVPSKALSKLPPRT*NGSITQ Trigger: CTGAGTGATGCTTCCATTTCAGGTTCTTGGGGGTAG...CTTACTCAGTGCCTTCGATGGCACTTTCACTACAGCACAGATTTCACCTCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | GTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCAGGCATAGCTTATTACTGATCTaGAAGAGTCCATATTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: VPSKALSKGLELSAPLRHSLLLI*KSPYSV Trigger: CACGGAATATGGACTCTTCCAGATCAGTAATAAGCT...ATGCCTGAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | TGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGAAGAGGAAAGGGGTGCTaGGCTAATGGGGTAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: WKIVFKNSVMSLQGPRLRRGKGC*ANGVRR Trigger: TCTCCTTACCCCATTAGCCCAGCACCCCTTTCCTCT...TCTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | TACAGGGCCCAAGGCTCAGAGACAGATAAGCTTTGGGGGAACAGAAAGAAACAAACAGCTCACATTTTGTaGATTGCTTGGCCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: YRAQGSETDKLWGNRKKQTAHIL*IAWPGW Trigger: CCATCCTGGCCAAGCAATTCACAAAATGTGAGCTGT...TTGTTTCTTTCTGTTCCCCCAAAGCTTATCTGTCTCTGAGCCTTGGGCCCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | AGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTACAGCTCACATTTTGTaGATTGCTTGGCCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RGEICAVVKVPSKALSKGTAHIL*IAWPGW Trigger: CCATCCTGGCCAAGCAATTCACAAAATGTGAGCTGT...ACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGCACAGATTTCACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | GTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCAGGCATACCAAAGCTTATTACTaGTCTGGAAGAGTCCATATT | + |
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Preference number: 4 (lower is better) Translates to: VPSKALSKGLELSAPLRHTKAYY*SGRVHI Trigger: AATATGGACTCTTCCAGATCAGTAATAAGCTTTGGT...ATGCCTGAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | GTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACCACTCAGGCATCCCTaGAAAATAGTCTTCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: VVKVPSKALSKGLELSAPPLRHP*KIVFKN Trigger: ATTCTTGAAGACTATTTTCCAGGGATGCCTGAGTGG...TGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | GTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACCCAAGAACCTGAAATaGAAGCATCACTCAGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: VVKVPSKALSKGLELSAPPKNLK*KHHSVS Trigger: TGAAACTGAGTGATGCTTCCATTTCAGGTTCTTGGG...TGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | AAAGACATTCCTGGCCTGATGTCAAGCGACACAAGCCATCAAGTGGAATACAGTTCACATTTTGTGAATTaGTTGGCCAGGATGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KDIPGLMSSDTSHQVEYSSHFVN*LARMAG Trigger: CCCTGCCATCCTGGCCAAGCAATTCACAAAATGTGA...ACTGTATTCCACTTGATGGCTTGTGTCGCTTGACATCAGGCCAGGAATGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | CTGAGCCCTCCATTAGGCAACCCCTTATTAGGAAAATTGCTACCAAGGAGCGGACACTGGTGTGAAACATaGTACAGATCAATTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSPPLGNPLLGKLLPRSGHWCET*YRSIQA Trigger: TGCCTGAATTGATCTGTACCATGTTTCACACCAGTG...TCCGCTCCTTGGTAGCAATTTTCCTAATAAGGGGTTGCCTAATGGAGGGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | GCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCATATCCAGGATCTTCTTaGCACACATTATGTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: AVVKVPSKALSKGLELSAYPGSS*HTLCHQ Trigger: CTGATGACATAATGTGTGCCAAGAAGATCCTGGATA...TGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | TTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGAAGGCAACTGAGGGACCTGGCTaGTCTTGCACCAAAGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: FIQDRGEICAVVKVPSKATEGPG*SCTKAY Trigger: ATAAGCTTTGGTGCAAGAGCAGCCAGGTCCCTCAGT...TGCCTTCGATGGCACTTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | AGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCCACTCAGGCATCCCTaGAAAATAGTCTTCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: RGEICAVVKVPSKALSKGPLRHP*KIVFKN Trigger: ATTCTTGAAGACTATTTTCCAGGGATGCCTGAGTGG...ACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGCACAGATTTCACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | GAAAATTGCTACCAAGGAGCGGAGCGAGAGAGGCTTAATAACAGAAACCTGAGTGGTGAGTTAGCTGACTaGATCTTTACATTCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: ENCYQGAERERLNNRNLSGELAD*IFTFIP Trigger: GGGAATGAATGTAAAGATTCAGTCAGCTAACTCACC...ACTCAGGTTTCTGTTATTAAGCCTCTCTCGCTCCGCTCCTTGGTAGCAATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | GCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCAAGAGTCCATATTCCGTaGTTTCATTGTTTTCAACTA | + |
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Preference number: 4 (lower is better) Translates to: AVVKVPSKALSKGLELSARVHIP*FHCFQL Trigger: TAGTTGAAAACAATGAAAGCACGGAATATGGACTCT...TGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | TGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGAGTGTGTCATAACCACTaGTGTGAAACATGGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: WKIVFKNSVMSLQGPRLRVCHNH*CETWYR Trigger: TCTGTACCATGTTTCACACCAGTGGTTATGACACAC...TCTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | TACAGGGCCCAAGGCTCAGAGACAGATAAGCTTTGGGGGAACAGAAAGAAACAAAGCTTATTACTGATCTaGAAGAGTCCATATTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: YRAQGSETDKLWGNRKKQSLLLI*KSPYSV Trigger: CACGGAATATGGACTCTTCCAGATCAGTAATAAGCT...TTGTTTCTTTCTGTTCCCCCAAAGCTTATCTGTCTCTGAGCCTTGGGCCCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR TCA 90 bp | TGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGATATTCAAGACAGAGGTaGAATCTGTGCTGTAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: WKIVFKNSVMSLQGPRLRYSRQR*NLCCSE Trigger: TTCACTACAGCACAGATTTCACCTCTGTCTTGAATA...TCTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | CTGAGCCCTCCATTAGGCAACCCCTTATTAGGAAAATTGCTACCAAGGAGCGGAAGAGTCCATATTCCGTaGTTTCATTGTTTTCAACTA | + |
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Preference number: 4 (lower is better) Translates to: LSPPLGNPLLGKLLPRSGRVHIP*FHCFQL Trigger: TAGTTGAAAACAATGAAAGCACGGAATATGGACTCT...TCCGCTCCTTGGTAGCAATTTTCCTAATAAGGGGTTGCCTAATGGAGGGCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | AGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCATTGTTTTCAACTATaGCTTGTGTGTCATAACCAC | + |
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Preference number: 4 (lower is better) Translates to: RGEICAVVKVPSKALSKGHCFQL*LVCHNH Trigger: GTGGTTATGACACACAAGCCATAGTTGAAAACAATG...ACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGCACAGATTTCACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | GAAAATTGCTACCAAGGAGCGGAGCGAGAGAGGCTTAATAACAGAAACCTGAGTTATCCAGGATCTTCTTaGCACACATTATGTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: ENCYQGAERERLNNRNLSYPGSS*HTLCHQ Trigger: CTGATGACATAATGTGTGCCAAGAAGATCCTGGATA...ACTCAGGTTTCTGTTATTAAGCCTCTCTCGCTCCGCTCCTTGGTAGCAATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS-3UTR CCA 90 bp | CAAAGTGGGACCTTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGCACTGGTGTGAAACATaGTACAGATCAATTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QSGTFIQDRGEICAVVKVHWCET*YRSIQA Trigger: TGCCTGAATTGATCTGTACCATGTTTCACACCAGTG...CACTTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAAGGTCCCACTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR GCA 90 bp | CTTCAAAGTGGGACCTTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAATTCAGGCAAAGCGATaGCTCCATAACCATCTATGT | + |
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Preference number: 4 (lower is better) Translates to: LQSGTFIQDRGEICAVVKIQAKR*LHNHLC Trigger: ACATAGATGGTTATGGAGGCATCGCTTTGCCTGAAT...TTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAAGGTCCCACTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301046.6 |
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| CDS-3UTR CCA 90 bp | CTTCAAAGTGGGACCTTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAACATTGTTTTCAACTATaGCTTGTGTGTCATAACCAC | + |
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Preference number: 4 (lower is better) Translates to: LQSGTFIQDRGEICAVVKHCFQL*LVCHNH Trigger: GTGGTTATGACACACAAGCCATAGTTGAAAACAATG...TTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAAGGTCCCACTTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301046.6 |
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| CDS-3UTR CAA 90 bp | TCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCAGGCATCCCTGGGGGACCTGGCTGCTCTaGCACCAAAGCTTATTACTG | + |
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Preference number: 5 (lower is better) Translates to: SKALSKGLELSAPLRHPWGTWLL*HQSLLL Trigger: CAGTAATAAGCTTTGGTGCAAGAGCAGCCAGGTCCC...CCAGGGATGCCTGAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | CAAACTGAGGTGGCATTAGGGAAGAGGTATTCCAGGAGTGTGGAGTGGGCAGGGGGGACCTGGCTGCTCTaGCACCAAAGCTTATTACTG | + |
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Preference number: 5 (lower is better) Translates to: QTEVALGKRYSRSVEWAGGTWLL*HQSLLL Trigger: CAGTAATAAGCTTTGGTGCAAGAGCAGCCAGGTCCC...CCCTGCCCACTCCACACTCCTGGAATACCTCTTCCCTAATGCCACCTCAGTTTG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | GTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCACCACTCTCATCATCCAGGAACTaGTCACAGGAGATGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: VKVPSKALSKGLELSAPLSSSRN*SQEMSQ Trigger: CTGTGACATCTCCTGTGACAAGTTCCTGGATGATGA...GAGTGGTGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | GCTGTAGTGAAAGTGCCATCGAAGGCACTGAGTAAGGGTCTAGAGCTCAGTGCATCATCATCCAGGAACTaGTCACAGGAGATGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: AVVKVPSKALSKGLELSASSSRN*SQEMSQ Trigger: CTGTGACATCTCCTGTGACAAGTTCCTGGATGATGA...TGCACTGAGCTCTAGACCCTTACTCAGTGCCTTCGATGGCACTTTCACTACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | TTCCCAGGAGGGCTGAAGTGGAAGAGCGTGGACGAGAATTACAGAAAGACATTCCCCTTATTAGGAAAATaGCTACCAAGGAGCGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: FPGGLKWKSVDENYRKTFPLLGK*LPRSGA Trigger: CGCTCCGCTCCTTGGTAGCAATTTTCCTAATAAGGG...GAATGTCTTTCTGTAATTCTCGTCCACGCTCTTCCACTTCAGCCCTCCTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS TCA 90 bp | TCATCCAGGAACTTGTCACAGGAGATGTCACAGATGTTCCTTGACTaGGGGACCTGGCTGCTCTTGCACCAAAGCTTATTACTGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSRNLSQEMSQMFLD*GTWLLLHQSLLLIW Trigger: CCAGATCAGTAATAAGCTTTGGTGCAAGAGCAGCCAGGTCCCTCAGTCAAGGAACATCTGTGACATCTCCTGTGACAAGTTCCTGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | TACAGGGCCCAAGGCTCAGAGACAGATAAGCTTTGGGGGAACAGAAAGAAACAACATTTTGTGAATTGCTaGGCCAGGATGGCAGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: YRAQGSETDKLWGNRKKQHFVNC*ARMAGN Trigger: GTTCCCTGCCATCCTGGCCAAGCAATTCACAAAATG...TTGTTTCTTTCTGTTCCCCCAAAGCTTATCTGTCTCTGAGCCTTGGGCCCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | CTGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGCTCACATTTTGTGAATaGCTTGGCCAGGATGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LENSLQEFGDVTTGPKAQLTFCE*LGQDGR Trigger: CCTGCCATCCTGGCCAAGCAATTCACAAAATGTGAG...CTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | CAAACTGAGGTGGCATTAGGGAAGAGGTATTCCAGGAGTGTGGAGTGGGCAGGGATATCCAGGATCTTCTaGGCACACATTATGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: QTEVALGKRYSRSVEWAGISRIF*AHIMSS Trigger: TGATGACATAATGTGTGCCAAGAAGATCCTGGATAT...CCCTGCCCACTCCACACTCCTGGAATACCTCTTCCCTAATGCCACCTCAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS TCA 90 bp | GTCATCATCCAGGAACTTGTCACAGGAGATGTCACAGATGTTCCTTaGCTGAGGGACCTGGCTGCTCTTGCACCAAAGCTTATTACTGAT | + |
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Preference number: 5 (lower is better) Translates to: VIIQELVTGDVTDVP*LRDLAALAPKLITD Trigger: ATCAGTAATAAGCTTTGGTGCAAGAGCAGCCAGGTCCCTCAGTCAAGGAACATCTGTGACATCTCCTGTGACAAGTTCCTGGATGATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | TGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGACATTTTGTGAATTGCTaGGCCAGGATGGCAGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: WKIVFKNSVMSLQGPRLRHFVNC*ARMAGN Trigger: GTTCCCTGCCATCCTGGCCAAGCAATTCACAAAATG...TCTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | CAAACTGAGGTGGCATTAGGGAAGAGGTATTCCAGGAGTGTGGAGTGGGCAGGGTATTCCGTGCTTTCATaGTTTTCAACTATGGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: QTEVALGKRYSRSVEWAGYSVLS*FSTMAC Trigger: ACAAGCCATAGTTGAAAACAATGAAAGCACGGAATA...CCCTGCCCACTCCACACTCCTGGAATACCTCTTCCCTAATGCCACCTCAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | TTTATTCAAGACAGAGGTGAAATCTGTGCTGTAGTGAAAGTGCCATCGAAGGCACTCACATTTTGTGAATaGCTTGGCCAGGATGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: FIQDRGEICAVVKVPSKALTFCE*LGQDGR Trigger: CCTGCCATCCTGGCCAAGCAATTCACAAAATGTGAG...TGCCTTCGATGGCACTTTCACTACAGCACAGATTTCACCTCTGTCTTGAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS TCA 90 bp | TCCTTGACTGAGGGACCTGGCTGCTCTTGCACCAAAGCTTATTACTaGTCTGGAAGAGTCCATATTCCGTGCTTTCATTGTTTTCAACTA | + |
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Preference number: 5 (lower is better) Translates to: SLTEGPGCSCTKAYY*SGRVHIPCFHCFQL Trigger: TAGTTGAAAACAATGAAAGCACGGAATATGGACTCTTCCAGATCAGTAATAAGCTTTGGTGCAAGAGCAGCCAGGTCCCTCAGTCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | TGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGAGTTTTCAACTATGGCTaGTGTGTCATAACCACTGGT | + |
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Preference number: 5 (lower is better) Translates to: WKIVFKNSVMSLQGPRLRVFNYG*CVITTG Trigger: ACCAGTGGTTATGACACACAAGCCATAGTTGAAAAC...TCTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | CTGGAAAATAGTCTTCAAGAATTCGGTGATGTCACTACAGGGCCCAAGGCTCAGTATTCCGTGCTTTCATaGTTTTCAACTATGGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LENSLQEFGDVTTGPKAQYSVLS*FSTMAC Trigger: ACAAGCCATAGTTGAAAACAATGAAAGCACGGAATA...CTGAGCCTTGGGCCCTGTAGTGACATCACCGAATTCTTGAAGACTATTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS-3UTR CAA 90 bp | GAGATGCAATGTTACCAACAGCTTGCTTTAGGGCATAGAACTAAACAAGTGGAAATATCCAGGATCTTCTaGGCACACATTATGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: EMQCYQQLALGHRTKQVEISRIF*AHIMSS Trigger: TGATGACATAATGTGTGCCAAGAAGATCCTGGATAT...TTCCACTTGTTTAGTTCTATGCCCTAAAGCAAGCTGTTGGTAACATTGCATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS CAA 90 bp | ACCATCTATGTCTTTCAGCAGCTGGGACAGCTCACATTTTGTGAATaGCTTGGCCAGGATGGCAGGGAACAGGATGCCCACCAGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: TIYVFQQLGQLTFCE*LGQDGREQDAHQEQ Trigger: CTGTTCCTGGTGGGCATCCTGTTCCCTGCCATCCTGGCCAAGCAATTCACAAAATGTGAGCTGTCCCAGCTGCTGAAAGACATAGATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS CAA 90 bp | GGGAACAGGATGCCCACCAGGAACAGAGGGACAAAGAACCTCATTTaGGCTACCCCCAAGAACCTGAAATGGAAGCATCACTCAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GNRMPTRNRGTKNLI*ATPKNLKWKHHSVS Trigger: TGAAACTGAGTGATGCTTCCATTTCAGGTTCTTGGGGGTAGCCAAAATGAGGTTCTTTGTCCCTCTGTTCCTGGTGGGCATCCTGTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549817.1 |
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| CDS GCA 72 bp | TGTGAAACATGGTACAGATCAATTCAGGCAAAGCGATaGCTCCATAACCATCTATGTCTTTCAGCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CETWYRSIQAKR*LHNHLCLSAAG Trigger: CCCAGCTGCTGAAAGACATAGATGGTTATGGAGGCATCGCTTTGCCTGAATTGATCTGTACCATGTTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS CCA 72 bp | CTATGGCTTGTGTGTCATAACCACTGGTGTGAAACATaGTACAGATCAATTCAGGCAAAGCGATGCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LWLVCHNHWCET*YRSIQAKRCLH Trigger: ATGGAGGCATCGCTTTGCCTGAATTGATCTGTACCATGTTTCACACCAGTGGTTATGACACACAAGCCATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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| CDS CCA 72 bp | ACCTGGCTGCTCTTGCACCAAAGCTTATTACTGATCTaGAAGAGTCCATATTCCGTGCTTTCATTGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TWLLLHQSLLLI*KSPYSVLSLFS Trigger: TGAAAACAATGAAAGCACGGAATATGGACTCTTCCAGATCAGTAATAAGCTTTGGTGCAAGAGCAGCCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301046.6 ENST00000549817.1 |
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