Pregenerated sensors for LACRT (Homo sapiens)
Ensembl gene IDs: ENSG00000135413Ensembl transcript IDs: ENST00000257867.5, ENST00000546721.5, ENST00000547511.5, ENST00000549816.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAACCTTGGCTGTCCCCTaGACTGCTGCCGCCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSTLAVP*TAAAEV Trigger: GACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGT...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTACCTTGGCTGTCCCCTaGACTGCTGCCGCCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSATLAVP*TAAAEV Trigger: GACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGT...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTTGTCCCCTGAACTGCTaGCGCCGAAGTCTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSACPLNC*RRSLLG Trigger: GCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACA...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATGTCCCCTGAACTGCTaGCGCCGAAGTCTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSCPLNC*RRSLLG Trigger: GCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTGGCTGTCCCCTGAACTaGTGCCGCCGAAGTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSAGCPLN*CRRSLL Trigger: CAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCC...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGGCTGTCCCCTGAACTaGTGCCGCCGAAGTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSGCPLN*CRRSLL Trigger: CAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCC...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGGTTGTCTCTGGGGGTaGAGCTGGTTCTGCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSGCLWG*SWFCWT Trigger: GGTCCAGCAGAACCAGCTTCACCCCCAGAGACAACC...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCACCTGCCTGCTTGAGGTaGCCTTGGCTGTCCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSPACLR*PWLSPE Trigger: TTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGG...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGGCCCCTGCTACAGCTaGCAAGAAGAGGAGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSGPCYS*QEEESG Trigger: ACCACTCTCCTCTTCTTGGCAGCTGTAGCAGGGGCC...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257867.5 ENST00000547511.5 |
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| CDS-3UTR CCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTGCCGCCGAAGTCTCCTaGGCTGTTGTGGTTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSAAAEVS*AVVVVS Trigger: AGAGACAACCACAACAGCCCAGGAGACTTCGGCGGC...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCCGCCGAAGTCTCCTaGGCTGTTGTGGTTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSAAEVS*AVVVVS Trigger: AGAGACAACCACAACAGCCCAGGAGACTTCGGCGGC...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTTCTCCTGGGCTGTTGTaGTTGTCTCTGGGGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSASPGLL*LSLGVK Trigger: CTTCACCCCCAGAGACAACCACAACAGCCCAGGAGA...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATCTCCTGGGCTGTTGTaGTTGTCTCTGGGGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSSPGLL*LSLGVK Trigger: CTTCACCCCCAGAGACAACCACAACAGCCCAGGAGA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAAGGGGGTTTAGTTCCTaGCTGCTTGAGGTGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSRGFSS*LLEVTL Trigger: CAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCT...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTAGGGGGTTTAGTTCCTaGCTGCTTGAGGTGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSARGFSS*LLEVTL Trigger: CAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCT...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCACCTGGCACGCCTCCGTaGATTCCTTTTCCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSPGTPP*IPFPAF Trigger: AAAAGCAGGAAAAGGAATGCACGGAGGCGTGCCAGG...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTGAATTGTTTTCCACCTaGCACGCCTCCGTGCATTCC | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSAELFST*HASVHS Trigger: GGAATGCACGGAGGCGTGCCAGGTGGAAAACAATTC...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTTGGTTCTGCTGGACCTaGGATCTCTTCATTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSAWFCWT*DLFIRL Trigger: AAGCCTAATGAAGAGATCTCAGGTCCAGCAGAACCA...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATGGTTCTGCTGGACCTaGGATCTCTTCATTAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSWFCWT*DLFIRL Trigger: AAGCCTAATGAAGAGATCTCAGGTCCAGCAGAACCA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATCCTTTTCCTGCTTTTaGAAGGGCTTGTTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSSFSCF*KGLFQG Trigger: CCCCTGAAACAAGCCCTTGCAAAAGCAGGAAAAGGA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTTGCACTCACTTTCGATaGATTGTTTTCCACCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSACTHFR*IVFHLA Trigger: TGCCAGGTGGAAAACAATTCATCGAAAGTGAGTGCA...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546721.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGTGCATTCCTTTTCCTaGTTTTGCAAGGGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSVHSFS*FCKGLF Trigger: GAACAAGCCCTTGCAAAAGCAGGAAAAGGAATGCAC...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257867.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCACACTTCCATTTTCGATaGATTGTTTTCCACCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSHFHFR*IVFHLA Trigger: TGCCAGGTGGAAAACAATTCATCGAAAATGGAAGTG...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000257867.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTCACTTCCATTTTCGATaGATTGTTTTCCACCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSAHFHFR*IVFHLA Trigger: TGCCAGGTGGAAAACAATTCATCGAAAATGGAAGTG...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000257867.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGTGCATTCCTTTTCCTaGTTTTGCAAGGGCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSVHSFS*FCKGLF Trigger: AAACAAGCCCTTGCAAAAGCAGGAAAAGGAATGCAC...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTGTGCATTCCTTTTCCTaGTTTTGCAAGGGCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSAVHSFS*FCKGLF Trigger: AAACAAGCCCTTGCAAAAGCAGGAAAAGGAATGCAC...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATTTCATTCTTTGGGATaGGGAGTGAGTATAACCACA | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSFHSLG*GVSITT Trigger: TGTGGTTATACTCACTCCTCATCCCAAAGAATGAAA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257867.5 ENST00000547511.5 |
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| CDS-3UTR TCA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTTTTCATTCTTTGGGATaGGGAGTGAGTATAACCACA | + |
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Preference number: 4 (lower is better) Translates to: WATRVFKALSPMIPFFSAFHSLG*GVSITT Trigger: TGTGGTTATACTCACTCCTCATCCCAAAGAATGAAA...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257867.5 ENST00000547511.5 |
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| CDS-3UTR CCA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAAATTCACTTCCATCTTaGGATGCACTCACTTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: LWATRVFKALSPMIPFFSNSLPS*DALTFD Trigger: ATCGAAAGTGAGTGCATCCCAAGATGGAAGTGAATT...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546721.5 |
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| CDS CCA 90 bp | TGGCTGTCCCCTGAACTGCTGCCGCCGAAGTCTCCTGGGCTGTTGTaGTTGTCTCTGGGGGTGAAGCTGGTTCTGCTGGACCTGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: WLSPELLPPKSPGLL*LSLGVKLVLLDLRS Trigger: AGATCTCAGGTCCAGCAGAACCAGCTTCACCCCCAGAGACAACCACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS TCA 90 bp | AGGGGGTTTAGTTCCTGCCTGCTTGAGGTGACCTTGGCTGTCCCCTaGACTGCTGCCGCCGAAGTCTCCTGGGCTGTTGTGGTTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RGFSSCLLEVTLAVP*TAAAEVSWAVVVVS Trigger: AGAGACAACCACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS TCA 90 bp | TTGCAAGGGCTTGTTTCAGGGGGTTTAGTTCCTGCCTGCTTGAGGTaGCCTTGGCTGTCCCCTGAACTGCTGCCGCCGAAGTCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LQGLVSGGLVPACLR*PWLSPELLPPKSPG Trigger: CCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCTGAAACAAGCCCTTGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS TCA 90 bp | GAGACAGAGACTTACTCAGGGGGTTTAGTTCCTGCCTGCTTGAGGTaGCCTTGGCTGTCCCCTGAACTGCTGCCGCCGAAGTCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ETETYSGGLVPACLR*PWLSPELLPPKSPG Trigger: CCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCTGAGTAAGTCTCTGTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 90 bp | TCTCCACTATGGATTTCAGGGGGTTTAGTTCCTGCCTGCTTGAGGTaGCCTTGGCTGTCCCCTGAACTGCTGCCGCCGAAGTCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SPLWISGGLVPACLR*PWLSPELLPPKSPG Trigger: CCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCTGAAATCCATAGTGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257867.5 |
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| CDS TCA 90 bp | GAGTCTACCTGCTTCTCACCAGGCTTATCTCTGTGCGTGGAGGTGTaGTGTGGGCCTGCAGCCAGAGACTTTTCTAGGTTGTTGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: ESTCFSPGLSLCVEV*CGPAARDFSRLLIW Trigger: CCAGATCAACAACCTAGAAAAGTCTCTGGCTGCAGGCCCACATCACACCTCCACGCACAGAGATAAGCCTGGTGAGAAGCAGGTAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 90 bp | TGGAGGTGTGATGTGGGCCTGCAGCCAGAGACTTTTCTAGGTTGTTaGTCTGGCATAGAGACAGAGACTTACTCAGGGGGTTTAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: WRCDVGLQPETFLGC*SGIETETYSGGLVP Trigger: AGGAACTAAACCCCCTGAGTAAGTCTCTGTCTCTATGCCAGATCAACAACCTAGAAAAGTCTCTGGCTGCAGGCCCACATCACACCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 90 bp | TGGGTGCAATGCACAATCCCATTTGTGCCTTTGTGTTCAGCTGTTTaGGTCTACCTGCTTCTCACCAGGCTTATCTCTGTGCGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: WVQCTIPFVPLCSAV*VYLLLTRLISVRGG Trigger: ACCTCCACGCACAGAGATAAGCCTGGTGAGAAGCAGGTAGACTCAAACAGCTGAACACAAAGGCACAAATGGGATTGTGCATTGCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 90 bp | CAGGACATCATCCCTACAGAAAGTCCTAAAGTGCAGAAGTTTTGCTaGGGGCTCCAGCACTTCTCTCATAGGAAGTTGTGTGAGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QDIIPTESPKVQKFC*GLQHFSHRKLCEPG Trigger: TCCTGGCTCACACAACTTCCTATGAGAGAAGTGCTGGAGCCCTCAGCAAAACTTCTGCACTTTAGGACTTTCTGTAGGGATGATGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCACCTGGGCTGTTGTGGTaGTCTCTGGGGGTGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LWATRVFKALSPMIPFFSPGLLW*SLGVKL Trigger: CAGCTTCACCCCCAGAGACAACCACAACAGCCCAGG...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTCCTGGGCTGTTGTGGTaGTCTCTGGGGGTGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: WATRVFKALSPMIPFFSAPGLLW*SLGVKL Trigger: CAGCTTCACCCCCAGAGACAACCACAACAGCCCAGG...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAAAGTCTCCTGGGCTGTaGTGGTTGTCTCTGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LWATRVFKALSPMIPFFSKSPGL*WLSLGV Trigger: CACCCCCAGAGACAACCACAACAGCCCAGGAGACTT...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTAAGTCTCCTGGGCTGTaGTGGTTGTCTCTGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: WATRVFKALSPMIPFFSAKSPGL*WLSLGV Trigger: CACCCCCAGAGACAACCACAACAGCCCAGGAGACTT...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 |
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| CDS GCA 90 bp | TATTGTGAAAACGTTGTGTGTGGGTGCAATGCACAATCCCATTTGTaGCTTTGTGTTCAGCTGTTTGAGTCTACCTGCTTCTCACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: YCENVVCGCNAQSHL*LCVQLFESTCFSPG Trigger: GCCTGGTGAGAAGCAGGTAGACTCAAACAGCTGAACACAAAGGCACAAATGGGATTGTGCATTGCACCCACACACAACGTTTTCACAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 90 bp | CAGGACAGAAACCATGTATTGTGCAGGCTGCAACATCTACTATTGTaGAAACGTTGTGTGTGGGTGCAATGCACAATCCCATTTGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: QDRNHVLCRLQHLLL*KRCVWVQCTIPFVP Trigger: AGGCACAAATGGGATTGTGCATTGCACCCACACACAACGTTTTCACAATAGTAGATGTTGCAGCCTGCACAATACATGGTTTCTGTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS GCA 90 bp | TGTGCAGGCTGCAACATCTACTATTGTGAAAACGTTGTGTGTGGGTaGAATGCACAATCCCATTTGTGCCTTTGTGTTCAGCTGTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: CAGCNIYYCENVVCG*NAQSHLCLCVQLFE Trigger: CTCAAACAGCTGAACACAAAGGCACAAATGGGATTGTGCATTGCACCCACACACAACGTTTTCACAATAGTAGATGTTGCAGCCTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 90 bp | TACAGCTGCCAAGAAGAGGAGAGTGGTAAATTTCATTCTTTGGGATaGGGAGTGAGTATAACCACAGAATCTGCAGAAGGTCTGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: YSCQEEESGKFHSLG*GVSITTESAEGLGN Trigger: ATTCCCCAGACCTTCTGCAGATTCTGTGGTTATACTCACTCCTCATCCCAAAGAATGAAATTTACCACTCTCCTCTTCTTGGCAGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257867.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCACTCACTTTCGATGAATaGTTTTCCACCTGGCACGCC | + |
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Preference number: 5 (lower is better) Translates to: LWATRVFKALSPMIPFFSLTFDE*FSTWHA Trigger: GGCGTGCCAGGTGGAAAACAATTCATCGAAAGTGAG...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546721.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTTCCATTTTCGATGAATaGTTTTCCACCTGGCACGCC | + |
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Preference number: 5 (lower is better) Translates to: WATRVFKALSPMIPFFSASIFDE*FSTWHA Trigger: GGCGTGCCAGGTGGAAAACAATTCATCGAAAATGGA...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000257867.5 ENST00000547511.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATCCATTTTCGATGAATaGTTTTCCACCTGGCACGCC | + |
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Preference number: 5 (lower is better) Translates to: LWATRVFKALSPMIPFFSSIFDE*FSTWHA Trigger: GGCGTGCCAGGTGGAAAACAATTCATCGAAAATGGA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000257867.5 ENST00000547511.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATTCCTTTTCCTGCTTTaGCAAGGGCTTGTTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LWATRVFKALSPMIPFFSFLFLL*QGLVSG Trigger: CCCTGAAACAAGCCCTTGCAAAAGCAGGAAAAGGAA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTTTCCTTTTCCTGCTTTaGCAAGGGCTTGTTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: WATRVFKALSPMIPFFSAFLFLL*QGLVSG Trigger: CCCTGAAACAAGCCCTTGCAAAAGCAGGAAAAGGAA...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCATTCCTTTTCCTGCTTTaGCAAGGGCTTGTTCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: LWATRVFKALSPMIPFFSFLFLL*QGLVLL Trigger: TAACAGAACAAGCCCTTGCAAAAGCAGGAAAAGGAA...TGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257867.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTACAAGGGTATTTAAGGCTTTAAGTCCAATGATCCCATTCTTTTCAGCTAAATTCACTTCCATCTaGGGATGCACTCACTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: WATRVFKALSPMIPFFSAKFTSI*GCTHFR Trigger: TCGAAAGTGAGTGCATCCCAAGATGGAAGTGAATTT...AGCTGAAAAGAATGGGATCATTGGACTTAAAGCCTTAAATACCCTTGTAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546721.5 |
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| CDS CAA 90 bp | CCTTGGCTGTCCCCTGAACTGCTGCCGCCGAAGTCTCCTGGGCTGTaGTGGTTGTCTCTGGGGGTGAAGCTGGTTCTGCTGGACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PWLSPELLPPKSPGL*WLSLGVKLVLLDLR Trigger: TCTCAGGTCCAGCAGAACCAGCTTCACCCCCAGAGACAACCACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS TCA 72 bp | AGTTCCTGCCTGCTTGAGGTGACCTTGGCTGTCCCCTaGACTGCTGCCGCCGAAGTCTCCTGGGCTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSCLLEVTLAVP*TAAAEVSWAVV Trigger: CACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS CCA 72 bp | CCTGAACTGCTGCCGCCGAAGTCTCCTGGGCTGTTGTaGTTGTCTCTGGGGGTGAAGCTGGTTCTGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PELLPPKSPGLL*LSLGVKLVLLD Trigger: GTCCAGCAGAACCAGCTTCACCCCCAGAGACAACCACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS CAA 72 bp | GAACTGCTGCCGCCGAAGTCTCCTGGGCTGTTGTGGTaGTCTCTGGGGGTGAAGCTGGTTCTGCTGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: ELLPPKSPGLLW*SLGVKLVLLDL Trigger: CAGGTCCAGCAGAACCAGCTTCACCCCCAGAGACAACCACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS CAA 72 bp | TCCCCTGAACTGCTGCCGCCGAAGTCTCCTGGGCTGTaGTGGTTGTCTCTGGGGGTGAAGCTGGTTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPELLPPKSPGL*WLSLGVKLVLL Trigger: CAGCAGAACCAGCTTCACCCCCAGAGACAACCACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS CAA 90 bp | CTGTCCCCTGAACTGCTGCCGCCGAAGTCTCCTGGGCTGTTGTGGTaGTCTCTGGGGGTGAAGCTGGTTCTGCTGGACCTGAGATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSPELLPPKSPGLLW*SLGVKLVLLDLRSL Trigger: AAGAGATCTCAGGTCCAGCAGAACCAGCTTCACCCCCAGAGACAACCACAACAGCCCAGGAGACTTCGGCGGCAGCAGTTCAGGGGACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000257867.5 ENST00000546721.5 ENST00000547511.5 ENST00000549816.1 |
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| CDS TCA 72 bp | TGGATTTCAGGGGGTTTAGTTCCTGCCTGCTTGAGGTaGCCTTGGCTGTCCCCTGAACTGCTGCCGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: WISGGLVPACLR*PWLSPELLPPK Trigger: CTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCTGAAATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257867.5 |
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| CDS TCA 72 bp | CTTGTTTCAGGGGGTTTAGTTCCTGCCTGCTTGAGGTaGCCTTGGCTGTCCCCTGAACTGCTGCCGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVSGGLVPACLR*PWLSPELLPPK Trigger: CTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCTGAAACAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS TCA 72 bp | ACTTACTCAGGGGGTTTAGTTCCTGCCTGCTTGAGGTaGCCTTGGCTGTCCCCTGAACTGCTGCCGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: TYSGGLVPACLR*PWLSPELLPPK Trigger: CTTCGGCGGCAGCAGTTCAGGGGACAGCCAAGGTCACCTCAAGCAGGCAGGAACTAAACCCCCTGAGTAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS CAA 72 bp | CACCTGGCACGCCTCCGTGCATTCCTTTTCCTGCTTTaGCAAGGGCTTGTTTCAGGGGGTTTAGTTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HLARLRAFLFLL*QGLVSGGLVPA Trigger: GGCAGGAACTAAACCCCCTGAAACAAGCCCTTGCAAAAGCAGGAAAAGGAATGCACGGAGGCGTGCCAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000546721.5 ENST00000547511.5 |
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| CDS TCA 72 bp | TGCTTCTCACCAGGCTTATCTCTGTGCGTGGAGGTGTaGTGTGGGCCTGCAGCCAGAGACTTTTCTAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: CFSPGLSLCVEV*CGPAARDFSRL Trigger: CAACCTAGAAAAGTCTCTGGCTGCAGGCCCACATCACACCTCCACGCACAGAGATAAGCCTGGTGAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS CCA 72 bp | AGTCTACCTGCTTCTCACCAGGCTTATCTCTGTGCGTaGAGGTGTGATGTGGGCCTGCAGCCAGAGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: SLPASHQAYLCA*RCDVGLQPETF Trigger: AAAAGTCTCTGGCTGCAGGCCCACATCACACCTCCACGCACAGAGATAAGCCTGGTGAGAAGCAGGTAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS CAA 90 bp | GTGGGTGCAATGCACAATCCCATTTGTGCCTTTGTGTTCAGCTGTTaGAGTCTACCTGCTTCTCACCAGGCTTATCTCTGTGCGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VGAMHNPICAFVFSC*SLPASHQAYLCAWR Trigger: CCTCCACGCACAGAGATAAGCCTGGTGAGAAGCAGGTAGACTCAAACAGCTGAACACAAAGGCACAAATGGGATTGTGCATTGCACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS CCA 72 bp | GGGCCTGCAGCCAGAGACTTTTCTAGGTTGTTGATCTaGCATAGAGACAGAGACTTACTCAGGGGGTTTAGT | + |
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Preference number: 6 (lower is better) Translates to: GPAARDFSRLLI*HRDRDLLRGFS Trigger: ACTAAACCCCCTGAGTAAGTCTCTGTCTCTATGCCAGATCAACAACCTAGAAAAGTCTCTGGCTGCAGGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 72 bp | AAATTCACTTCCATCTTGGGATGCACTCACTTTCGATaGATTGTTTTCCACCTGGCACGCCTCCGTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: KFTSILGCTHFR*IVFHLARLRAF Trigger: GAATGCACGGAGGCGTGCCAGGTGGAAAACAATTCATCGAAAGTGAGTGCATCCCAAGATGGAAGTGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546721.5 |
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| CDS CAA 72 bp | CACCTGGCACGCCTCCGTGCATTCCTTTTCCTGCTTTaGCAAGGGCTTGTTCTGTTAGTAAGATACTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HLARLRAFLFLL*QGLVLLVRYFS Trigger: AGAAAAGTATCTTACTAACAGAACAAGCCCTTGCAAAAGCAGGAAAAGGAATGCACGGAGGCGTGCCAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257867.5 |
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| CDS CAA 72 bp | GAAAACGTTGTGTGTGGGTGCAATGCACAATCCCATTaGTGCCTTTGTGTTCAGCTGTTTGAGTCTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: ENVVCGCNAQSH*CLCVQLFESTC Trigger: GCAGGTAGACTCAAACAGCTGAACACAAAGGCACAAATGGGATTGTGCATTGCACCCACACACAACGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 72 bp | ATCCCTACAGAAAGTCCTAAAGTGCAGAAGTTTTGCTaGGGGCTCCAGCACTTCTCTCATAGGAAGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: IPTESPKVQKFC*GLQHFSHRKLC Trigger: ACACAACTTCCTATGAGAGAAGTGCTGGAGCCCTCAGCAAAACTTCTGCACTTTAGGACTTTCTGTAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS CAA 72 bp | ATTGTGCAGGCTGCAACATCTACTATTGTGAAAACGTaGTGTGTGGGTGCAATGCACAATCCCATTTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: IVQAATSTIVKT*CVGAMHNPICA Trigger: GGCACAAATGGGATTGTGCATTGCACCCACACACAACGTTTTCACAATAGTAGATGTTGCAGCCTGCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS CAA 90 bp | TACTATTGTGAAAACGTTGTGTGTGGGTGCAATGCACAATCCCATTaGTGCCTTTGTGTTCAGCTGTTTGAGTCTACCTGCTTCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: YYCENVVCGCNAQSH*CLCVQLFESTCFSP Trigger: TGGTGAGAAGCAGGTAGACTCAAACAGCTGAACACAAAGGCACAAATGGGATTGTGCATTGCACCCACACACAACGTTTTCACAATAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS TCA 72 bp | AACCATGTATTGTGCAGGCTGCAACATCTACTATTGTaGAAACGTTGTGTGTGGGTGCAATGCACAATCCCA | + |
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Preference number: 6 (lower is better) Translates to: NHVLCRLQHLLL*KRCVWVQCTIP Trigger: TGGGATTGTGCATTGCACCCACACACAACGTTTTCACAATAGTAGATGTTGCAGCCTGCACAATACATGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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| CDS CAA 90 bp | AAACCATGTATTGTGCAGGCTGCAACATCTACTATTGTGAAAACGTaGTGTGTGGGTGCAATGCACAATCCCATTTGTGCCTTTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KPCIVQAATSTIVKT*CVGAMHNPICAFVF Trigger: GAACACAAAGGCACAAATGGGATTGTGCATTGCACCCACACACAACGTTTTCACAATAGTAGATGTTGCAGCCTGCACAATACATGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549816.1 |
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