RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for L3MBTL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000198945

Ensembl transcript IDs: ENST00000361794.7, ENST00000368136.3, ENST00000368139.6, ENST00000526019.5, ENST00000526087.5, ENST00000528385.5, ENST00000531313.1, ENST00000533560.5, ENST00000533890.1, ENST00000674039.1

Found 415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCCCTGATCTGTaGGCATTTCAAATTTTGTGTCAACTGAAGTTGCTCCTTCACACC +
Preference number: 1 (lower is better)
Translates to: GGSWAITLGNHLPDL*AFQILCQLKLLLHT
Trigger: GGTGTGAAGGAGCAACTTCAGTTGACACAAAATTTGAAATGCTCACAGATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 90 bp ATAAATGACTGGGACACTGCAGATGTCACTGACCCTGTTTTACCTTaGATTGGCAAATGCAAAGGACTGCTAATGGACTTCCAACAGGGA +
Preference number: 1 (lower is better)
Translates to: INDWDTADVTDPVLP*IGKCKGLLMDFQQG
Trigger: TCCCTGTTGGAAGTCCATTAGCAGTCCTTTGCATTTGCCAATTCAAGGTAAAACAGGGTCAGTGACATCTGCAGTGTCCCAGTCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 90 bp CCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCCCTaGTCTGTGAGCATTTCAAATTTTGTGTCAACTGAAGTTGCTCCT +
Preference number: 1 (lower is better)
Translates to: PKRRFLGNYFGKSPP*SVSISNFVSTEVAP
Trigger: AGGAGCAACTTCAGTTGACACAAAATTTGAAATGCTCACAGATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 90 bp TTCTCACTTAGGAGTTATAACCGTCCTTGTGCTTTGAATAAAACATaGGCTTTAAAGCAGAATGCTGATGGTATTCAGAATTCACCATCT +
Preference number: 1 (lower is better)
Translates to: FSLRSYNRPCALNKT*ALKQNADGIQNSPS
Trigger: AGATGGTGAATTCTGAATACCATCAGCATTCTGCTTTAAAGCTCATGTTTTATTCAAAGCACAAGGACGGTTATAACTCCTAAGTGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
3UTR TCA 90 bp TATTGTCTCTTGAGTAATATAAATAATCCGATAGTGTTGCTCTTTTaGGTTTTGGAGACTTCTCACTTAGGAGTTATAACCGTCCTTGTG +
Preference number: 1 (lower is better)
Translates to: YCLLSNINNPIVLLF*VLETSHLGVITVLV
Trigger: CACAAGGACGGTTATAACTCCTAAGTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTATCGGATTATTTATATTACTCAAGAGACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
3UTR-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTAACTGCGTACTCCTCTaGCACCATCTGGCTCTTGTA +
Preference number: 2 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVNCVLL*HHLALV
Trigger: TACAAGAGCCAGATGGTGTCAGAGGAGTACGCAGTT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTGGACAATGCATGACCTaGGACAGCGCTCTGTACAGA +
Preference number: 2 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPGQCMT*DSALYR
Trigger: TCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCC...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGGACAATGCATGACCTaGGACAGCGCTCTGTACAGA +
Preference number: 2 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSGQCMT*DSALYR
Trigger: TCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGGACAATGCATGACCTaGGACAGCGCTCTGTACAGA +
Preference number: 2 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEGQCMT*DSALYR
Trigger: TCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATTGGAGGACAATGCATaGCCTGAGACAGCGCTCTGT +
Preference number: 2 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSLEDNA*PETALC
Trigger: ACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAATTGGAGGACAATGCATaGCCTGAGACAGCGCTCTGT +
Preference number: 2 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWELEDNA*PETALC
Trigger: ACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAA...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTATAGTGTTGCTCTTTTaGGTTTTGGAGACTTCTCAC +
Preference number: 2 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVIVLLF*VLETSH
Trigger: GTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTAT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAACTGCGTACTCCTCTaGCACCATCTGGCTCTTGTA +
Preference number: 2 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWENCVLL*HHLALV
Trigger: TACAAGAGCCAGATGGTGTCAGAGGAGTACGCAGTT...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACACCTCCCTGATCTGTaGGCATTTCAAATTTTGTGT +
Preference number: 2 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKHLPDL*AFQILC
Trigger: ACACAAAATTTGAAATGCTCACAGATCAGGGAGGTG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAAACAGAACCAAAAGATaGCTGTTGTTAGACAGTACC +
Preference number: 2 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSNRTKR*LLLDST
Trigger: GGTACTGTCTAACAACAGTCATCTTTTGGTTCTGTT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAAAATTTTGTGTCAACTaGAGTTGCTCCTTCACACCT +
Preference number: 2 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSKFCVN*SCSFTP
Trigger: AGGTGTGAAGGAGCAACTTCAGTTGACACAAAATTT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAAATTTTGTGTCAACTaGAGTTGCTCCTTCACACCT +
Preference number: 2 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKKFCVN*SCSFTP
Trigger: AGGTGTGAAGGAGCAACTTCAGTTGACACAAAATTT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTATAGTGTTGCTCTTTTaGGTTTTGGAGACTTCTCAC +
Preference number: 2 (lower is better)
Translates to: GTKMSETDATQNTLPNLFIVLLF*VLETSH
Trigger: GTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTAT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAACAGAACCAAAAGATaGCTGTTGTTAGACAGTACC +
Preference number: 2 (lower is better)
Translates to: GTKMSETDATQNTLPNLFNRTKR*LLLDST
Trigger: GGTACTGTCTAACAACAGTCATCTTTTGGTTCTGTT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATTTCTGTTGACAGAATaGGCTCTTAGTCTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKFLLTE*ALSLCK
Trigger: TTTACAGAGACTAAGAGCTCATTCTGTCAACAGAAA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAATAGTGTTGCTCTTTTaGGTTTTGGAGACTTCTCAC +
Preference number: 2 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIIVLLF*VLETSH
Trigger: GTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTAT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
3UTR TCA 72 bp CCCCCAACCATAACTGCATACAACTGCGTACTCCTCTaGCACCATCTGGCTCTTGTAAACACCGGGGCACCA +
Preference number: 3 (lower is better)
Translates to: PPTITAYNCVLL*HHLALVNTGAP
Trigger: TGGTGCCCCGGTGTTTACAAGAGCCAGATGGTGTCAGAGGAGTACGCAGTTGTATGCAGTTATGGTTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 72 bp TGGGACACTGCAGATGTCACTGACCCTGTTTTACCTTaGATTGGCAAATGCAAAGGACTGCTAATGGACTTC +
Preference number: 3 (lower is better)
Translates to: WDTADVTDPVLP*IGKCKGLLMDF
Trigger: GAAGTCCATTAGCAGTCCTTTGCATTTGCCAATTCAAGGTAAAACAGGGTCAGTGACATCTGCAGTGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR CCA 72 bp CTACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTaGGCAATTACTTTGGGAAATCACCTCCCTGATCTG +
Preference number: 3 (lower is better)
Translates to: LQKKESFQNGGS*AITLGNHLPDL
Trigger: CAGATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR CCA 72 bp AATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTaGGAAATCACCTCCCTGATCTGTGAGCATTTCAAA +
Preference number: 3 (lower is better)
Translates to: NPSKTEVLGQLL*EITSLICEHFK
Trigger: TTTGAAATGCTCACAGATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR-3UTR CAA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTTTGCTCCTTCACACCTaGTCTTTTCAGCAAAATCAC +
Preference number: 3 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPLLLHT*SFQQNH
Trigger: GTGATTTTGCTGAAAAGACAAGGTGTGAAGGAGCAA...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 72 bp TGGGCAATTACTTTGGGAAATCACCTCCCTGATCTGTaGGCATTTCAAATTTTGTGTCAACTGAAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: WAITLGNHLPDL*AFQILCQLKLL
Trigger: GAGCAACTTCAGTTGACACAAAATTTGAAATGCTCACAGATCAGGGAGGTGATTTCCCAAAGTAATTGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 72 bp AGCGCTCTGTACAGATTAGTGTTTCTGTTGACAGAATaGGCTCTTAGTCTCTGTAAACCACCACAATTTCAT +
Preference number: 3 (lower is better)
Translates to: SALYRLVFLLTE*ALSLCKPPQFH
Trigger: ATGAAATTGTGGTGGTTTACAGAGACTAAGAGCTCATTCTGTCAACAGAAACACTAATCTGTACAGAGCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 72 bp TCCCTGATCTGTGAGCATTTCAAATTTTGTGTCAACTaGAGTTGCTCCTTCACACCTTGTCTTTTCAGCAAA +
Preference number: 3 (lower is better)
Translates to: SLICEHFKFCVN*SCSFTPCLFSK
Trigger: TTTGCTGAAAAGACAAGGTGTGAAGGAGCAACTTCAGTTGACACAAAATTTGAAATGCTCACAGATCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
3UTR TCA 72 bp AGGAGTTATAACCGTCCTTGTGCTTTGAATAAAACATaGGCTTTAAAGCAGAATGCTGATGGTATTCAGAAT +
Preference number: 3 (lower is better)
Translates to: RSYNRPCALNKT*ALKQNADGIQN
Trigger: ATTCTGAATACCATCAGCATTCTGCTTTAAAGCTCATGTTTTATTCAAAGCACAAGGACGGTTATAACTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
3UTR TCA 72 bp AAAGATAAATTTAGCTCAGTGAACAGAACCAAAAGATaGCTGTTGTTAGACAGTACCTGGTTAAAAGCTCAA +
Preference number: 3 (lower is better)
Translates to: KDKFSSVNRTKR*LLLDSTWLKAQ
Trigger: TTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTGGTTCTGTTCACTGAGCTAAATTTATCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTACCCCCACCTCCCTCTaGGCGCGACGGACAGACCGA +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVTPTSL*ARRTDR
Trigger: TCGGTCTGTCCGTCGCGCTCAGAGGGAGGTGGGGGT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCAGTTGGCAGCACTGTaGGGGCCCAGATGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNQLAAL*GPRCLA
Trigger: AGCGAGACATCTGGGCCCTCACAGTGCTGCCAACTG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATGGACAGAAAGACAGCTaGCCGACGCTGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNGQKDS*PTLCLL
Trigger: CAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCC...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCAAATGGTCCAGGGCTaGGGGCGCAATGCGCATGTG +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVQMVQG*GRNAHV
Trigger: CACATGCGCATTGCGCCCGCAGCCCTGGACCATTTG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361794.7
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCAGCTTCGCCGGCACTaGCACCGCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVQLRRH*HRFLLF
Trigger: GAAGAGGAGAAAGCGGTGGCAGTGCCGGCGAAGCTG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATGAGGTCGGGGCTTCTTaGGCAGTTGGTACCATCCAA +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNEVGAS*AVGTIQ
Trigger: TTGGATGGTACCAACTGCTCAAGAAGCCCCGACCTC...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATAGGATTGATGCTCCTTaGACAGCTTCGCCGGCACTG +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNRIDAP*TASPAL
Trigger: CAGTGCCGGCGAAGCTGTTCAAGGAGCATCAATCCT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAACCCCCACCTCCCTCTaGGCGCGACGGACAGACCGA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKTPTSL*ARRTDR
Trigger: TCGGTCTGTCCGTCGCGCTCAGAGGGAGGTGGGGGT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCGACGCTGTGCCTGCTaGACGGTGGGTTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPRRCAC*TVGSSR
Trigger: CCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGCGGTCCCCGCGCCCTaGAAAGCGGCTAGTTACCCC +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSAVPAP*KAASYP
Trigger: GGGGTAACTAGCCGCTTTCCAGGGCGCGGGGACCGC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACAGTACACAGACTaGTGCTCAGGATCCACGCCT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNTQYTD*CSGSTP
Trigger: AGGCGTGGATCCTGAGCATCAGTCTGTGTACTGTGT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATTTGGAGGACAATGCATaGCCTGAGACAGCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNLEDNA*PETALC
Trigger: ACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAA...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTGACCGACGCTGTGCCTaGTGGACGGTGGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPDRRCA*WTVGSS
Trigger: GGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTC...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGGAAGAAGTTTGCTTTaGTGCTCCCAGCGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVGRSLL*CSQRKG
Trigger: GCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACGACGCTGTGCCTGCTaGACGGTGGGTTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKRRCAC*TVGSSR
Trigger: CCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGCGGTCCCCGCGCCCTaGAAAGCGGCTAGTTACCCC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFAVPAP*KAASYP
Trigger: GGGGTAACTAGCCGCTTTCCAGGGCGCGGGGACCGC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGGGATGTCCTGTTTTTaGACACCAGCCTACAGGGTG +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVGMSCF*TPAYRV
Trigger: CACCCTGTAGGCTGGTGTTCAAAAACAGGACATCCC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTTGGAGGACAATGCATaGCCTGAGACAGCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVLEDNA*PETALC
Trigger: ACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAACCCCCACCTCCCTCTaGGCGCGACGGACAGACCGA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFITPTSL*ARRTDR
Trigger: TCGGTCTGTCCGTCGCGCTCAGAGGGAGGTGGGGGT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTTCCTCCGTGCTCTCTaGGAACCCCTCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVFLRAL*EPLRIL
Trigger: AAGAATCCTGAGGGGTTCGCAGAGAGCACGGAGGAA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAGACCGACGCTGTGCCTaGTGGACGGTGGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKDRRCA*WTVGSS
Trigger: GGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTC...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCAGTTGGAAGAAGTTTaGTTTGCTGCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNQLEEV*FAAPSA
Trigger: TGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGTGGAAATACGGGCCTaGAGCTCGGGGGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSVEIRA*SSGERS
Trigger: CGACCTCTCCCCCGAGCTCCAGGCCCGTATTTCCAC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGTGCCTGCTGGACGGTaGGTTCTTCCCGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFVPAGR*VLPGHL
Trigger: GAGGTGCCCGGGAAGAACCCACCGTCCAGCAGGCAC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGCGGTCCCCGCGCCCTaGAAAGCGGCTAGTTACCCC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIAVPAP*KAASYP
Trigger: GGGGTAACTAGCCGCTTTCCAGGGCGCGGGGACCGC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCTCCCGTGGAAGGGTaGGGTAGAGCCGCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISPVEG*GRAAVP
Trigger: GGGGACCGCGGCTCTACCCCACCCTTCCACGGGAGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCACCAGCCTACAGGGTaGATATCAGGAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVHQPTG*ISGESA
Trigger: TGCAGATTCTCCTGATATTCACCCTGTAGGCTGGTG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGGACAGAAAGACAGCTaGCCGACGCTGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEGQKDS*PTLCLL
Trigger: CAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGGACAGAAAGACAGCTaGCCGACGCTGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSGQKDS*PTLCLL
Trigger: CAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACAGCTTCGCCGGCACTaGCACCGCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSQLRRH*HRFLLF
Trigger: GAAGAGGAGAAAGCGGTGGCAGTGCCGGCGAAGCTG...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGACCGACGCTGTGCCTaGTGGACGGTGGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFDRRCA*WTVGSS
Trigger: GGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACTGGCAGGGATTCCTaGGACAGTTGGAAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNTGRDS*DSWKKF
Trigger: AAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGGCTTCTTGAGCAGTTaGTACCATCCAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVGFLSS*YHPSGG
Trigger: ACCACCACTTGGATGGTACCAACTGCTCAAGAAGCC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGTGCCTGCTGGACGGTaGGTTCTTCCCGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIVPAGR*VLPGHL
Trigger: GAGGTGCCCGGGAAGAACCCACCGTCCAGCAGGCAC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACGACGCTGTGCCTGCTaGACGGTGGGTTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIRRCAC*TVGSSR
Trigger: CCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGCGCAAGGGCAGACATaGAATTGGGGACTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVAQGQT*NWGLKG
Trigger: TCCTTTAAGTCCCCAATTCCATGTCTGCCCTTGCGC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCAGTTCTCACAGAACTaGAGCCCTTCTACTTTCACT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNQFSQN*SPSTFT
Trigger: AGTGAAAGTAGAAGGGCTTCAGTTCTGTGAGAACTG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTAAACCTCCGCGACGGTaGGGACACAGTACACAGACT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPKPPRR*GHSTQT
Trigger: AGTCTGTGTACTGTGTCCTCACCGTCGCGGAGGTTT...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGATGTCTCGCTCTCTTaGAATGGCCAATCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVDVSLS*NGQSLY
Trigger: GTAAAGGGATTGGCCATTTCAAGAGAGCGAGACATC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCAGTTGGCAGCACTGTaGGGGCCCAGATGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFQLAAL*GPRCLA
Trigger: AGCGAGACATCTGGGCCCTCACAGTGCTGCCAACTG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTTAGGAGGCAAACCCTaGTTTAGTACAGCCGAATCC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVLGGKP*FSTAES
Trigger: GGATTCGGCTGTACTAAAGCAGGGTTTGCCTCCTAA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGACCGACGCTGTGCCTaGTGGACGGTGGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIDRRCA*WTVGSS
Trigger: GGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCCCTTCTACTTTCACTaGATCCTTCAACCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNPFYFH*ILQPER
Trigger: CCTTTCAGGTTGAAGGATCCAGTGAAAGTAGAAGGG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCACCACCCAACTGGGTaGATATCCAGAGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPHHPTG*ISRASA
Trigger: TGCAGACGCTCTGGATATCCACCCAGTTGGGTGGTG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCTCACACCACCCAACTaGGTGGATATCCAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPLTPPN*VDIQSV
Trigger: GACGCTCTGGATATCCACCCAGTTGGGTGGTGTGAG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTACCCTTTTGGAGGATaGAGTTTGTGGCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVYPFGG*SLWPVF
Trigger: GAAAACCGGCCACAAACTCCATCCTCCAAAAGGGTA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATGATTCCTGCGACAGTTaGAAGAAGTTTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNDSCDS*KKFALL
Trigger: CAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATC...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATATTTGGAAACTTTACTaGCAGGGATTCCTGCGACAG +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNIWKLY*QGFLRQ
Trigger: CTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAAT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAACCTCCGTCTCCCGTaGAAGGGTGGGGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFINLRLP*KGGVEP
Trigger: CGGCTCTACCCCACCCTTCCACGGGAGACGGAGGTT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGTTCTCCGTCTCCCGTaGAAGGGTGGGGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIVLRLP*KGGVEP
Trigger: CGGCTCTACCCCACCCTTCCACGGGAGACGGAGAAC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368136.3
ENST00000526019.5
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCAGTTCTCACAGAACTaGAGCCCTTCTACTTTCACT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVQFSQN*SPSTFT
Trigger: AGTGAAAGTAGAAGGGCTTCAGTTCTGTGAGAACTG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTCTACGTTGCCATACTaGCAACAGTTCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVSTLPY*QQFSQN
Trigger: GTTCTGTGAGAACTGTTGTCAGTATGGCAACGTAGA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAAAACCTCCGCGACGGTaGGGACACAGTACACAGACT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSKPPRR*GHSTQT
Trigger: AGTCTGTGTACTGTGTCCTCACCGTCGCGGAGGTTT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTGGGCTCAAAGGAGGCTaGAGGGGATGTCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPGLKGG*RGCPVF
Trigger: AAAAACAGGACATCCCCTTCAGCCTCCTTTGAGCCC...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACAGTTGGCAGCACTGTaGGGGCCCAGATGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIQLAAL*GPRCLA
Trigger: AGCGAGACATCTGGGCCCTCACAGTGCTGCCAACTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGACAGAAAGACAGCTaGCCGACGCTGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGQKDS*PTLCLL
Trigger: CAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCACCTCCCTGATCTGTaGGCATTTCAAATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNHLPDL*AFQILC
Trigger: ACACAAAATTTGAAATGCTCACAGATCAGGGAGGTG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCATCCCAGTCTTCTCTaGAAAGACTTCTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVHPSLL*KDFLSS
Trigger: ACTGCTCAAGAAGTCTTTTCAGAGAAGACTGGGATG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATGACACTCATCTACGTTaGCATACTGACAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNDTHLR*HTDNSS
Trigger: AGAACTGTTGTCAGTATGGCAACGTAGATGAGTGTC...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTTTCCTCCGTGCTCTCTaGGAACCCCTCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPFLRAL*EPLRIL
Trigger: AAGAATCCTGAGGGGTTCGCAGAGAGCACGGAGGAA...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATCGTCTTTTCCTCCGTaGTCTCTGCGAACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSSSFPP*SLRTPQ
Trigger: CTGAGGGGTTCGCAGAGAGCACGGAGGAAAAGACGA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAATCGTCTTTTCCTCCGTaGTCTCTGCGAACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWESSFPP*SLRTPQ
Trigger: CTGAGGGGTTCGCAGAGAGCACGGAGGAAAAGACGA...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACAGCTTCGCCGGCACTaGCACCGCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIQLRRH*HRFLLF
Trigger: GAAGAGGAGAAAGCGGTGGCAGTGCCGGCGAAGCTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGATATCCAGAGCGTCTaGATTCACCCAGAAGTCATA +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVDIQSV*IHPEVI
Trigger: TATGACTTCTGGGTGAATGCAGACGCTCTGGATATC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTTGACATCATCAGCATaGTGGTCTCTGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVLTSSA*WSLISG
Trigger: CCCTGAAATCAGAGACCAGCATGCTGATGATGTCAA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCCCTTCTACTTTCACTaGATCCTTCAACCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVPFYFH*ILQPER
Trigger: CCTTTCAGGTTGAAGGATCCAGTGAAAGTAGAAGGG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAACTCACACCACCCAACTaGGTGGATATCCAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWELTPPN*VDIQSV
Trigger: GACGCTCTGGATATCCACCCAGTTGGGTGGTGTGAG...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACTGAATAGGGACAGTTaGCAGCACTGTGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKLNRDS*QHCEGP
Trigger: TGGGCCCTCACAGTGCTGCCAACTGTCCCTATTCAG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGATTCCTGCGACAGTTaGAAGAAGTTTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVDSCDS*KKFALL
Trigger: CAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCTGGATCCTTCAACCTaGAAGGCATCCCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPLDPST*KASQSS
Trigger: AGAAGACTGGGATGCCTTTCAGGTTGAAGGATCCAG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAGGATTGATGCTCCTTaGACAGCTTCGCCGGCACTG +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFRIDAP*TASPAL
Trigger: CAGTGCCGGCGAAGCTGTTCAAGGAGCATCAATCCT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAACACAGTACACAGACTaGTGCTCAGGATCCACGCCT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSTQYTD*CSGSTP
Trigger: AGGCGTGGATCCTGAGCATCAGTCTGTGTACTGTGT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAAACCTCCGCGACGGTaGGGACACAGTACACAGACT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFKPPRR*GHSTQT
Trigger: AGTCTGTGTACTGTGTCCTCACCGTCGCGGAGGTTT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATAGCAACACAGATGAATaGGGGATTCTTTTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNSNTDE*GILFVY
Trigger: GTAGACAAAAAGAATCCCTCATTCATCTGTGTTGCT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGGGATGTCCTGTTTTTaGACACCAGCCTACAGGGTG +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEGMSCF*TPAYRV
Trigger: CACCCTGTAGGCTGGTGTTCAAAAACAGGACATCCC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGGGCTCAAAGGAGGCTaGAGGGGATGTCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSGLKGG*RGCPVF
Trigger: AAAAACAGGACATCCCCTTCAGCCTCCTTTGAGCCC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCTTCAAAGTCTTCTTTaGCATCATCAGCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVLQSLL*HHQHAG
Trigger: ACCAGCATGCTGATGATGTCAAAGAAGACTTTGAAG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCTTCAAAGTTCATTGTaGGAATTCTTCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNLQSSL*EFFSAA
Trigger: AGCTGCAGAGAAGAATTCTCACAATGAACTTTGAAG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATATAGTGTTGCTCTTTTaGGTTTTGGAGACTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNIVLLF*VLETSH
Trigger: GTGAGAAGTCTCCAAAACTCAAAAGAGCAACACTAT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATAACAGAACCAAAAGATaGCTGTTGTTAGACAGTACC +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNNRTKR*LLLDST
Trigger: GGTACTGTCTAACAACAGTCATCTTTTGGTTCTGTT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGACCCTGTTTTACCTTaGATTGGCAAATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVDPVLP*IGKCKG
Trigger: TCCTTTGCATTTGCCAATTCAAGGTAAAACAGGGTC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTCGTCTTTTCCTCCGTaGTCTCTGCGAACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFSSFPP*SLRTPQ
Trigger: CTGAGGGGTTCGCAGAGAGCACGGAGGAAAAGACGA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACTCTTCCAGGTAGGATaGCCAGCACCACGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKLFQVG*PAPRFL
Trigger: AAGAAAGCGTGGTGCTGGGCATCCTACCTGGAAGAG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGTGATCATCTGTGTCTaGCACAGTTGCTACTCTAAT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVVIICV*HSCYSN
Trigger: ATTAGAGTAGCAACTGTGGCAGACACAGATGATCAC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAGAAGTTTGCTTTGCTaGTCCCAGCGCAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWERSLLC*SQRKGR
Trigger: TCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCT...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATGTGAGAATTCTTCTCTaGAGCTTTGAACATCAGGAT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNVRILL*SFEHQD
Trigger: ATCCTGATGTTCAAAGCTGCAGAGAAGAATTCTCAC...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTGTCCAGTAGGCAGGTaGAAATACGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFCPVGR*KYGPGA
Trigger: AGCTCCAGGCCCGTATTTCCACCTGCCTACTGGACA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCACCACCCAACTGGGTaGATATCCAGAGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFHHPTG*ISRASA
Trigger: TGCAGACGCTCTGGATATCCACCCAGTTGGGTGGTG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGGAGGATGGAGTTTGTaGCCGGTTTTCTCACACCAC +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSGGWSL*PVFSHH
Trigger: GTGGTGTGAGAAAACCGGCCACAAACTCCATCCTCC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCACATTTGGATAACCTaGTGGAGTAATAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GSCKHRGTKMSETDATQNHIWIT*WSNKGS
Trigger: AGAACCCTTATTACTCCACCAGGTTATCCAAATGTG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCTGAATAGGGACAGTTaGCAGCACTGTGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFLNRDS*QHCEGP
Trigger: TGGGCCCTCACAGTGCTGCCAACTGTCCCTATTCAG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGAGGTCGGGGCTTCTTaGGCAGTTGGTACCATCCAA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIEVGAS*AVGTIQ
Trigger: TTGGATGGTACCAACTGCTCAAGAAGCCCCGACCTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAACATCCCAGTCTTCTCTaGAAAGACTGTGGGACATCC +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEHPSLL*KDCGTS
Trigger: GGATGTCCCACAGTCTTTTCAGAGAAGACTGGGATG...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACTGGATCCTTCAACCTaGAAGGCATCCCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSLDPST*KASQSS
Trigger: AGAAGACTGGGATGCCTTTCAGGTTGAAGGATCCAG...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAGGATTGATGCTCCTTaGACAGCTTCGCCGGCACTG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIRIDAP*TASPAL
Trigger: CAGTGCCGGCGAAGCTGTTCAAGGAGCATCAATCCT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTACACAGTACACAGACTaGTGCTCAGGATCCACGCCT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFTQYTD*CSGSTP
Trigger: AGGCGTGGATCCTGAGCATCAGTCTGTGTACTGTGT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAAACCTCCGCGACGGTaGGGACACAGTACACAGACT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIKPPRR*GHSTQT
Trigger: AGTCTGTGTACTGTGTCCTCACCGTCGCGGAGGTTT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGAGGAGGTTTCACTTTaGAAGCTCTTGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEEEVSL*KLLQEQ
Trigger: CTGCTCCTGCAAGAGCTTTCAAAGTGAAACCTCCTC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTATTCAAATTGATTTCTaGATAGGGACAGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVIQIDF*IGTVGS
Trigger: GCTGCCAACTGTCCCTATTCAGAAATCAATTTGAAT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCTTCAAAGTTCATTGTaGGAATTCTTCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVLQSSL*EFFSAA
Trigger: AGCTGCAGAGAAGAATTCTCACAATGAACTTTGAAG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTAACAGAACCAAAAGATaGCTGTTGTTAGACAGTACC +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVNRTKR*LLLDST
Trigger: GGTACTGTCTAACAACAGTCATCTTTTGGTTCTGTT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAACTGCGTACTCCTCTaGCACCATCTGGCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKNCVLL*HHLALV
Trigger: TACAAGAGCCAGATGGTGTCAGAGGAGTACGCAGTT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGGACAATGCATGACCTaGGACAGCGCTCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFGQCMT*DSALYR
Trigger: TCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTATTCATGCAAATAAATaGCTGGGACACTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVIHANK*LGHCRC
Trigger: ACATCTGCAGTGTCCCAGTCATTTATTTGCATGAAT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTTCCTCCGTGCTCTCTaGGAACCCCTCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFFLRAL*EPLRIL
Trigger: AAGAATCCTGAGGGGTTCGCAGAGAGCACGGAGGAA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCGTCTTTTCCTCCGTaGTCTCTGCGAACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISSFPP*SLRTPQ
Trigger: CTGAGGGGTTCGCAGAGAGCACGGAGGAAAAGACGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCTCTTCCAGGTAGGATaGCCAGCACCACGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFLFQVG*PAPRFL
Trigger: AAGAAAGCGTGGTGCTGGGCATCCTACCTGGAAGAG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAGAAGTTTGCTTTGCTaGTCCCAGCGCAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFRSLLC*SQRKGR
Trigger: TCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGAAGAAGTTTGCTTTaGTGCTCCCAGCGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGRSLL*CSQRKG
Trigger: GCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTGTGAGAATTCTTCTCTaGAGCTTTGAACATCAGGAT +
Preference number: 4 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVVRILL*SFEHQD
Trigger: ATCCTGATGTTCAAAGCTGCAGAGAAGAATTCTCAC...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATGTCCAGTAGGCAGGTaGAAATACGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFICPVGR*KYGPGA
Trigger: AGCTCCAGGCCCGTATTTCCACCTGCCTACTGGACA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACACCACCCAACTGGGTaGATATCCAGAGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIHHPTG*ISRASA
Trigger: TGCAGACGCTCTGGATATCCACCCAGTTGGGTGGTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTCACACCACCCAACTaGGTGGATATCCAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILTPPN*VDIQSV
Trigger: GACGCTCTGGATATCCACCCAGTTGGGTGGTGTGAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTGAATAGGGACAGTTaGCAGCACTGTGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILNRDS*QHCEGP
Trigger: TGGGCCCTCACAGTGCTGCCAACTGTCCCTATTCAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAGCGCAAGGGCAGACATaGAATTGGGGACTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKAQGQT*NWGLKG
Trigger: TCCTTTAAGTCCCCAATTCCATGTCTGCCCTTGCGC...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGCGCAAGGGCAGACATaGAATTGGGGACTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEAQGQT*NWGLKG
Trigger: TCCTTTAAGTCCCCAATTCCATGTCTGCCCTTGCGC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCGTCTGTGCTCCATTTaGAAACTTTACTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPRLCSI*KLYWQG
Trigger: TCCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAACACAGTACACAGACTaGTGCTCAGGATCCACGCCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFITQYTD*CSGSTP
Trigger: AGGCGTGGATCCTGAGCATCAGTCTGTGTACTGTGT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGAGGAGGTTTCACTTTaGAAGCTCTTGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFEEVSL*KLLQEQ
Trigger: CTGCTCCTGCAAGAGCTTTCAAAGTGAAACCTCCTC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCACCAGCCTACAGGGTaGATATCAGGAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFHQPTG*ISGESA
Trigger: TGCAGATTCTCCTGATATTCACCCTGTAGGCTGGTG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGGATGTCCTGTTTTTaGACACCAGCCTACAGGGTG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGMSCF*TPAYRV
Trigger: CACCCTGTAGGCTGGTGTTCAAAAACAGGACATCCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGGCTCAAAGGAGGCTaGAGGGGATGTCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGLKGG*RGCPVF
Trigger: AAAAACAGGACATCCCCTTCAGCCTCCTTTGAGCCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGATGTCTCGCTCTCTTaGAATGGCCAATCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEDVSLS*NGQSLY
Trigger: GTAAAGGGATTGGCCATTTCAAGAGAGCGAGACATC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTTTTATTTCTTGGAAATaGCGGACTAGCCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPFISWK*RTSRRH
Trigger: ATGCCTCCGGCTAGTCCGTCATTTCCAAGAAATAAA...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAACTGCGTACTCCTCTaGCACCATCTGGCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFNCVLL*HHLALV
Trigger: TACAAGAGCCAGATGGTGTCAGAGGAGTACGCAGTT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATTCCTCCGTGCTCTCTaGGAACCCCTCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIFLRAL*EPLRIL
Trigger: AAGAATCCTGAGGGGTTCGCAGAGAGCACGGAGGAA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATTAGGAGGCAAACCCTaGTTTAGTACAGCCGAATCC +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSLGGKP*FSTAES
Trigger: GGATTCGGCTGTACTAAAGCAGGGTTTGCCTCCTAA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTCTTCCAGGTAGGATaGCCAGCACCACGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILFQVG*PAPRFL
Trigger: AAGAAAGCGTGGTGCTGGGCATCCTACCTGGAAGAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAGAAGTTTGCTTTGCTaGTCCCAGCGCAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIRSLLC*SQRKGR
Trigger: TCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCAGTTGGAAGAAGTTTaGTTTGCTGCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFQLEEV*FAAPSA
Trigger: TGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAACTGGCAGGGATTCCTaGGACAGTTGGAAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKTGRDS*DSWKKF
Trigger: AAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAACTGGCAGGGATTCCTaGGACAGTTGGAAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSTGRDS*DSWKKF
Trigger: AAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCTGACACCTCGTCTGTaGTCCATTTGGAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPLTPRL*SIWKLY
Trigger: GTAAAGTTTCCAAATGGAGCACAGACGAGGTGTCAG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGGCTTCTTGAGCAGTTaGTACCATCCAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFGFLSS*YHPSGG
Trigger: ACCACCACTTGGATGGTACCAACTGCTCAAGAAGCC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCCCTTCTACTTTCACTaGATCCTTCAACCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPPFYFH*ILQPER
Trigger: CCTTTCAGGTTGAAGGATCCAGTGAAAGTAGAAGGG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGAGGATGGAGTTTGTaGCCGGTTTTCTCACACCAC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGGWSL*PVFSHH
Trigger: GTGGTGTGAGAAAACCGGCCACAAACTCCATCCTCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAATACCCTTTTGGAGGATaGAGTTTGTGGCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEYPFGG*SLWPVF
Trigger: GAAAACCGGCCACAAACTCCATCCTCCAAAAGGGTA...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATACCCTTTTGGAGGATaGAGTTTGTGGCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKYPFGG*SLWPVF
Trigger: GAAAACCGGCCACAAACTCCATCCTCCAAAAGGGTA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTACATCATCAGCATGCTaGTCTCTGATTTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPTSSAC*SLISGE
Trigger: TTCCCCTGAAATCAGAGACCAGCATGCTGATGATGT...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAACGTCTGTGCTCCATTTaGAAACTTTACTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWERLCSI*KLYWQG
Trigger: TCCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACG...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAGACTTCTTGAGCAGTTaGTACCATCCAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKDFLSS*YHPSGG
Trigger: ACCACCACTTGGATGGTACCAACTGCTCAAGAAGTC...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAACACCAACCAACTGGATaGATATGTGGACTTGATGCT +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEHQPTG*ICGLDA
Trigger: AGCATCAAGTCCACATATTCATCCAGTTGGTTGGTG...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGAGGAGGTTTCACTTTaGAAGCTCTTGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIEEVSL*KLLQEQ
Trigger: CTGCTCCTGCAAGAGCTTTCAAAGTGAAACCTCCTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACACCAGCCTACAGGGTaGATATCAGGAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIHQPTG*ISGESA
Trigger: TGCAGATTCTCCTGATATTCACCCTGTAGGCTGGTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCTTCAAAGTCTTCTTTaGCATCATCAGCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPLQSLL*HHQHAG
Trigger: ACCAGCATGCTGATGATGTCAAAGAAGACTTTGAAG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTACCTCTGGCTTCATGTaGTGTTCTCATTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPTSGFM*CSHFTF
Trigger: GAAAGTGAAATGAGAACATCACATGAAGCCAGAGGT...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAACTGCGTACTCCTCTaGCACCATCTGGCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFINCVLL*HHLALV
Trigger: TACAAGAGCCAGATGGTGTCAGAGGAGTACGCAGTT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCACCTCCCTGATCTGTaGGCATTTCAAATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPHLPDL*AFQILC
Trigger: ACACAAAATTTGAAATGCTCACAGATCAGGGAGGTG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAACACTGCAGATGTCACTaGCCCTGTTTTACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEHCRCH*PCFTLN
Trigger: ATTCAAGGTAAAACAGGGTCAGTGACATCTGCAGTG...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACACTTCCTGGTAACGTaGCCACTCCATCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIHFLVT*PLHLSS
Trigger: ACTGGAAAGATGGAGTGGGCACGTTACCAGGAAGTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTGACACTCATCTACGTTaGCATACTGACAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPDTHLR*HTDNSS
Trigger: AGAACTGTTGTCAGTATGGCAACGTAGATGAGTGTC...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTTAGGAGGCAAACCCTaGTTTAGTACAGCCGAATCC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFLGGKP*FSTAES
Trigger: GGATTCGGCTGTACTAAAGCAGGGTTTGCCTCCTAA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATTGACATCATCAGCATaGTGGTCTCTGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSLTSSA*WSLISG
Trigger: CCCTGAAATCAGAGACCAGCATGCTGATGATGTCAA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACAGTTGGAAGAAGTTTaGTTTGCTGCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIQLEEV*FAAPSA
Trigger: TGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACTGACACCTCGTCTGTaGTCCATTTGGAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKLTPRL*SIWKLY
Trigger: GTAAAGTTTCCAAATGGAGCACAGACGAGGTGTCAG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTAACTCGAAAGCCCGATaGGATCACTGTTATATTCTG +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPNSKAR*DHCYIL
Trigger: CAGAATATAACAGTGATCCCATCGGGCTTTCGAGTT...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCTCGCTCTCTTGAAATaGCCAATCCCTTTACATCCC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFLALLK*PIPLHP
Trigger: GGGATGTAAAGGGATTGGCCATTTCAAGAGAGCGAG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAACATCATCAGCATGCTaGTCTCTGATTTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKTSSAC*SLISGE
Trigger: TTCCCCTGAAATCAGAGACCAGCATGCTGATGATGT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGCGCAAGGGCAGACATaGAATTGGGGACTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIAQGQT*NWGLKG
Trigger: TCCTTTAAGTCCCCAATTCCATGTCTGCCCTTGCGC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAATTTGGAAACTTTACTaGCAGGGATTCCTGCGACAG +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKIWKLY*QGFLRQ
Trigger: CTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAAT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACTTGGGCAATTACTTTaGGAAATCACCTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSLGQLL*EITSLI
Trigger: GATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAG...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCAGTTCTCACAGAACTaGAGCCCTTCTACTTTCACT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFQFSQN*SPSTFT
Trigger: AGTGAAAGTAGAAGGGCTTCAGTTCTGTGAGAACTG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAGAATACCCATCAAAGTaGAGCTTTATCCGGTATCCA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKEYPSK*SFIRYP
Trigger: TGGATACCGGATAAAGCTTCACTTTGATGGGTATTC...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGAATACCCATCAAAGTaGAGCTTTATCCGGTATCCA +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEEYPSK*SFIRYP
Trigger: TGGATACCGGATAAAGCTTCACTTTGATGGGTATTC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGACTTAGGAGCAGCTTaGGCTTTACATGTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEDLGAA*ALHVLR
Trigger: TCTTAAGACATGTAAAGCTCAAGCTGCTCCTAAGTC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGACTTAGGAGCAGCTTaGGCTTTACATGTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSDLGAA*ALHVLR
Trigger: TCTTAAGACATGTAAAGCTCAAGCTGCTCCTAAGTC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGATGTCTCGCTCTCTTaGAATGGCCAATCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIDVSLS*NGQSLY
Trigger: GTAAAGGGATTGGCCATTTCAAGAGAGCGAGACATC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACACCTCCCTGATCTGTaGGCATTTCAAATTTTGTGT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSHLPDL*AFQILC
Trigger: ACACAAAATTTGAAATGCTCACAGATCAGGGAGGTG...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCTGAAAAGACTTCTTaGGCAGTTGGTACCATCCAA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKSEKTS*AVGTIQ
Trigger: TTGGATGGTACCAACTGCTCAAGAAGTCTTTTCAGA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368139.6
CDS-3UTR GCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGGCGATCTTCACAATTaGTGTCCACTCTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEGDLHN*CPLSRF
Trigger: AAATCTTGAGAGTGGACAGCAATTGTGAAGATCGCC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR GCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATCTTTATCTTTGATGTaGCGAGCACAATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSSLSLM*RAQFWL
Trigger: CAGCCAGAATTGTGCTCGGCACATCAAAGATAAAGA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATTAGGAGGCAAACCCTaGTTTAGTACAGCCGAATCC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILGGKP*FSTAES
Trigger: GGATTCGGCTGTACTAAAGCAGGGTTTGCCTCCTAA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAGTGATCATCTGTGTCTaGCACAGTTGCTACTCTAAT +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKVIICV*HSCYSN
Trigger: ATTAGAGTAGCAACTGTGGCAGACACAGATGATCAC...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGTGATCATCTGTGTCTaGCACAGTTGCTACTCTAAT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSVIICV*HSCYSN
Trigger: ATTAGAGTAGCAACTGTGGCAGACACAGATGATCAC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAACTGGCAGGGATTCCTaGGACAGTTGGAAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFITGRDS*DSWKKF
Trigger: AAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAAACACAGAACTCTCTaGCGATCTTCACAATTGCTG +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKKHRTL*RSSQLL
Trigger: CAGCAATTGTGAAGATCGCCAGAGAGTTCTGTGTTT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATACCCTTTTGGAGGATaGAGTTTGTGGCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIYPFGG*SLWPVF
Trigger: GAAAACCGGCCACAAACTCCATCCTCCAAAAGGGTA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTCGCTCTCTTGAAATaGCCAATCCCTTTACATCCC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILALLK*PIPLHP
Trigger: GGGATGTAAAGGGATTGGCCATTTCAAGAGAGCGAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTATTTGGAAACTTTACTaGCAGGGATTCCTGCGACAG +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFIWKLY*QGFLRQ
Trigger: CTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAAT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACGTCTGTGCTCCATTTaGAAACTTTACTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIRLCSI*KLYWQG
Trigger: TCCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCAACTAAAGAAGAGGTaGAACTTACCCCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPQLKKR*NLPQNS
Trigger: TGAATTCTGGGGTAAGTTCCACCTCTTCTTTAGTTG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTATGCAAATAAATGACTaGGACACTGCAGATGTCACT +
Preference number: 4 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPMQIND*DTADVT
Trigger: AGTGACATCTGCAGTGTCCCAGTCATTTATTTGCAT...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGACTTCTTGAGCAGTTaGTACCATCCAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIDFLSS*YHPSGG
Trigger: ACCACCACTTGGATGGTACCAACTGCTCAAGAAGTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACAGTTCTCACAGAACTaGAGCCCTTCTACTTTCACT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIQFSQN*SPSTFT
Trigger: AGTGAAAGTAGAAGGGCTTCAGTTCTGTGAGAACTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCTACGTTGCCATACTaGCAACAGTTCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISTLPY*QQFSQN
Trigger: GTTCTGTGAGAACTGTTGTCAGTATGGCAACGTAGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCTGATCTTTATCTTTaGTGTGCCGAGCACAATTCT +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKSDLYL*CAEHNS
Trigger: AGAATTGTGCTCGGCACATCAAAGATAAAGATCAGA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAATCTGATCTTTATCTTTaGTGTGCCGAGCACAATTCT +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWESDLYL*CAEHNS
Trigger: AGAATTGTGCTCGGCACATCAAAGATAAAGATCAGA...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAGCAACACAGATGAATaGGGGATTCTTTTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKSNTDE*GILFVY
Trigger: GTAGACAAAAAGAATCCCTCATTCATCTGTGTTGCT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAATGAATATGTGGACTTaGTGCTTCACACCAATAGTC +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSMNMWT*CFTPIV
Trigger: GACTATTGGTGTGAAGCATCAAGTCCACATATTCAT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACACCAACCAACTGGATaGATATGTGGACTTGATGCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIHQPTG*ICGLDA
Trigger: AGCATCAAGTCCACATATTCATCCAGTTGGTTGGTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAATTCAAATTGATTTCTaGATAGGGACAGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKIQIDF*IGTVGS
Trigger: GCTGCCAACTGTCCCTATTCAGAAATCAATTTGAAT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATTTATTTCTTGGAAATaGCGGACTAGCCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIFISWK*RTSRRH
Trigger: ATGCCTCCGGCTAGTCCGTCATTTCCAAGAAATAAA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTACCTCTGGCTTCATGTaGTGTTCTCATTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFTSGFM*CSHFTF
Trigger: GAAAGTGAAATGAGAACATCACATGAAGCCAGAGGT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACTTCAAAGTTCATTGTaGGAATTCTTCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSLQSSL*EFFSAA
Trigger: AGCTGCAGAGAAGAATTCTCACAATGAACTTTGAAG...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAATTTTGTGTCAACTaGAGTTGCTCCTTCACACCT +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEKFCVN*SCSFTP
Trigger: AGGTGTGAAGGAGCAACTTCAGTTGACACAAAATTT...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGACCCTGTTTTACCTTaGATTGGCAAATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFDPVLP*IGKCKG
Trigger: TCCTTTGCATTTGCCAATTCAAGGTAAAACAGGGTC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACACTGCAGATGTCACTaGCCCTGTTTTACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIHCRCH*PCFTLN
Trigger: ATTCAAGGTAAAACAGGGTCAGTGACATCTGCAGTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAATTCATGCAAATAAATaGCTGGGACACTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSIHANK*LGHCRC
Trigger: ACATCTGCAGTGTCCCAGTCATTTATTTGCATGAAT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATTCATGCAAATAAATaGCTGGGACACTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEIHANK*LGHCRC
Trigger: ACATCTGCAGTGTCCCAGTCATTTATTTGCATGAAT...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACATCCCAGTCTTCTCTaGAAAGACTTCTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIHPSLL*KDFLSS
Trigger: ACTGCTCAAGAAGTCTTTTCAGAGAAGACTGGGATG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGGCGATCTTCACAATTaGTGTCCACTCTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFGDLHN*CPLSRF
Trigger: AAATCTTGAGAGTGGACAGCAATTGTGAAGATCGCC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR GCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTCTTTATCTTTGATGTaGCGAGCACAATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFSLSLM*RAQFWL
Trigger: CAGCCAGAATTGTGCTCGGCACATCAAAGATAAAGA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGATATCCAGAGCGTCTaGATTCACCCAGAAGTCATA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIDIQSV*IHPEVI
Trigger: TATGACTTCTGGGTGAATGCAGACGCTCTGGATATC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATTGACATCATCAGCATaGTGGTCTCTGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILTSSA*WSLISG
Trigger: CCCTGAAATCAGAGACCAGCATGCTGATGATGTCAA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTGACACCTCGTCTGTaGTCCATTTGGAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILTPRL*SIWKLY
Trigger: GTAAAGTTTCCAAATGGAGCACAGACGAGGTGTCAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACCCTTCTACTTTCACTaGATCCTTCAACCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIPFYFH*ILQPER
Trigger: CCTTTCAGGTTGAAGGATCCAGTGAAAGTAGAAGGG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAACTCGAAAGCCCGATaGGATCACTGTTATATTCTG +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFNSKAR*DHCYIL
Trigger: CAGAATATAACAGTGATCCCATCGGGCTTTCGAGTT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAACATCATCAGCATGCTaGTCTCTGATTTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFITSSAC*SLISGE
Trigger: TTCCCCTGAAATCAGAGACCAGCATGCTGATGATGT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGATTCCTGCGACAGTTaGAAGAAGTTTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIDSCDS*KKFALL
Trigger: CAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAATTTGGAAACTTTACTaGCAGGGATTCCTGCGACAG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIIWKLY*QGFLRQ
Trigger: CTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAAT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTTGGGCAATTACTTTaGGAAATCACCTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILGQLL*EITSLI
Trigger: GATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACAACTAAAGAAGAGGTaGAACTTACCCCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKQLKKR*NLPQNS
Trigger: TGAATTCTGGGGTAAGTTCCACCTCTTCTTTAGTTG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAATGCAAATAAATGACTaGGACACTGCAGATGTCACT +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKMQIND*DTADVT
Trigger: AGTGACATCTGCAGTGTCCCAGTCATTTATTTGCAT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGAATACCCATCAAAGTaGAGCTTTATCCGGTATCCA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIEYPSK*SFIRYP
Trigger: TGGATACCGGATAAAGCTTCACTTTGATGGGTATTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGACTTAGGAGCAGCTTaGGCTTTACATGTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIDLGAA*ALHVLR
Trigger: TCTTAAGACATGTAAAGCTCAAGCTGCTCCTAAGTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAGCAACACAGATGAATaGGGGATTCTTTTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFSNTDE*GILFVY
Trigger: GTAGACAAAAAGAATCCCTCATTCATCTGTGTTGCT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTATGAATATGTGGACTTaGTGCTTCACACCAATAGTC +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFMNMWT*CFTPIV
Trigger: GACTATTGGTGTGAAGCATCAAGTCCACATATTCAT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTTCAAAGTCTTCTTTaGCATCATCAGCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILQSLL*HHQHAG
Trigger: ACCAGCATGCTGATGATGTCAAAGAAGACTTTGAAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAACCTCTGGCTTCATGTaGTGTTCTCATTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFITSGFM*CSHFTF
Trigger: GAAAGTGAAATGAGAACATCACATGAAGCCAGAGGT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATTTCTGTTGACAGAATaGGCTCTTAGTCTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSFLLTE*ALSLCK
Trigger: TTTACAGAGACTAAGAGCTCATTCTGTCAACAGAAA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCTGAAAAGACTTCTTaGGCAGTTGGTACCATCCAA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISEKTS*AVGTIQ
Trigger: TTGGATGGTACCAACTGCTCAAGAAGTCTTTTCAGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGCGATCTTCACAATTaGTGTCCACTCTCAAGATTT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGDLHN*CPLSRF
Trigger: AAATCTTGAGAGTGGACAGCAATTGTGAAGATCGCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGACACTCATCTACGTTaGCATACTGACAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIDTHLR*HTDNSS
Trigger: AGAACTGTTGTCAGTATGGCAACGTAGATGAGTGTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCTTTATCTTTGATGTaGCGAGCACAATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISLSLM*RAQFWL
Trigger: CAGCCAGAATTGTGCTCGGCACATCAAAGATAAAGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGTGATCATCTGTGTCTaGCACAGTTGCTACTCTAAT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIVIICV*HSCYSN
Trigger: ATTAGAGTAGCAACTGTGGCAGACACAGATGATCAC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAAACACAGAACTCTCTaGCGATCTTCACAATTGCTG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIKHRTL*RSSQLL
Trigger: CAGCAATTGTGAAGATCGCCAGAGAGTTCTGTGTTT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAACTCGAAAGCCCGATaGGATCACTGTTATATTCTG +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFINSKAR*DHCYIL
Trigger: CAGAATATAACAGTGATCCCATCGGGCTTTCGAGTT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATGTTTTACCTTGAATTaGCAAATGCAAAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKCFTLN*QMQRTA
Trigger: AGCAGTCCTTTGCATTTGCCAATTCAAGGTAAAACA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTATGCAAATAAATGACTaGGACACTGCAGATGTCACT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFMQIND*DTADVT
Trigger: AGTGACATCTGCAGTGTCCCAGTCATTTATTTGCAT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCTGATCTTTATCTTTaGTGTGCCGAGCACAATTCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISDLYL*CAEHNS
Trigger: AGAATTGTGCTCGGCACATCAAAGATAAAGATCAGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAGCAACACAGATGAATaGGGGATTCTTTTTGTCTAC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISNTDE*GILFVY
Trigger: GTAGACAAAAAGAATCCCTCATTCATCTGTGTTGCT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAATGAATATGTGGACTTaGTGCTTCACACCAATAGTC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIMNMWT*CFTPIV
Trigger: GACTATTGGTGTGAAGCATCAAGTCCACATATTCAT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAATTCAAATTGATTTCTaGATAGGGACAGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIIQIDF*IGTVGS
Trigger: GCTGCCAACTGTCCCTATTCAGAAATCAATTTGAAT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTTCAAAGTTCATTGTaGGAATTCTTCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILQSSL*EFFSAA
Trigger: AGCTGCAGAGAAGAATTCTCACAATGAACTTTGAAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR TCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAACAGAACCAAAAGATaGCTGTTGTTAGACAGTACC +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFINRTKR*LLLDST
Trigger: GGTACTGTCTAACAACAGTCATCTTTTGGTTCTGTT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR GCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGTGAGAATTCTTCTCTaGAGCTTTGAACATCAGGAT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIVRILL*SFEHQD
Trigger: ATCCTGATGTTCAAAGCTGCAGAGAAGAATTCTCAC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACACATTTGGATAACCTaGTGGAGTAATAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIHIWIT*WSNKGS
Trigger: AGAACCCTTATTACTCCACCAGGTTATCCAAATGTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACAAAACGGAGGTTCTTaGGCAATTACTTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIQNGGS*AITLGN
Trigger: ATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACAACTAAAGAAGAGGTaGAACTTACCCCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIQLKKR*NLPQNS
Trigger: TGAATTCTGGGGTAAGTTCCACCTCTTCTTTAGTTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTGTTTTACCTTGAATTaGCAAATGCAAAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GTKMSETDATQNTLPNLFCFTLN*QMQRTA
Trigger: AGCAGTCCTTTGCATTTGCCAATTCAAGGTAAAACA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CCA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATGTTTTACCTTGAATTaGCAAATGCAAAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFICFTLN*QMQRTA
Trigger: AGCAGTCCTTTGCATTTGCCAATTCAAGGTAAAACA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS GCA 90 bp GAGGGGAAACTGCGCTGGTGCCGGTGCCGCCGCCGCCGCCGCCGCTaGCGGGGAGGCTCGCTCTGGCTTCCCTGTTACTGCTGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: EGKLRWCRCRRRRRR*RGGSLWLPCYCCCA
Trigger: GGCGCAGCAGCAGTAACAGGGAAGCCAGAGCGAGCCTCCCCGGCAGCGGCGGCGGCGGCGGCGGCACCGGCACCAGCGCAGTTTCCCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS GCA 90 bp GTCTCACGAGTAGTCCTGACAAATGGTCCAGGGCTGCGGGCGCAATaGGCATGTGCGCGTAGAGTCAGGGCTGGGGAGAGGGGAAACTGC +
Preference number: 5 (lower is better)
Translates to: VSRVVLTNGPGLRAQ*ACARRVRAGERGNC
Trigger: GCAGTTTCCCCTCTCCCCAGCCCTGACTCTACGCGCACATGCGCATTGCGCCCGCAGCCCTGGACCATTTGTCAGGACTACTCGTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS CCA 90 bp AGGCTCGCTCTGGCTTCCCTGTTACTGCTGCTGCGCCTTCGCCGCTaGAAAGCAGCAATAAAGCCGGGTGGCAAATGCAGCTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RLALASLLLLLRLRR*KAAIKPGGKCSCPQ
Trigger: CTGCGGGCAGCTGCATTTGCCACCCGGCTTTATTGCTGCTTTCCAGCGGCGAAGGCGCAGCAGCAGTAACAGGGAAGCCAGAGCGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS TCA 90 bp CAAGGGCAGACATGGAATTGGGGACTTAAAGGACAGAAAGACAGCTaGCCGACGCTGTGCCTGCTGGACGGTGGGTTCTTCCCGGGCACC +
Preference number: 5 (lower is better)
Translates to: QGQTWNWGLKGQKDS*PTLCLLDGGFFPGT
Trigger: GGTGCCCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCCTTTAAGTCCCCAATTCCATGTCTGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 90 bp CAGCTTCGCCGGCACTGCCACCGCTTTCTCCTCTTCCAGGTAGGATaGCCAGCACCACGCTTTCTTTCCTTTAGGAGGCAAACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QLRRHCHRFLLFQVG*PAPRFLSFRRQTLL
Trigger: AAGCAGGGTTTGCCTCCTAAAGGAAAGAAAGCGTGGTGCTGGGCATCCTACCTGGAAGAGGAGAAAGCGGTGGCAGTGCCGGCGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS GCA 90 bp ATTGGGGACTTAAAGGACAGAAAGACAGCTGACCGACGCTGTGCCTaGTGGACGGTGGGTTCTTCCCGGGCACCTCTGGCTTCATGTGAT +
Preference number: 5 (lower is better)
Translates to: IGDLKDRKTADRRCA*WTVGSSRAPLASCD
Trigger: ATCACATGAAGCCAGAGGTGCCCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCCTTTAAGTCCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS TCA 90 bp AGGGACAGTTGGCAGCACTGTGAGGGCCCAGATGTCTCGCTCTCTTaGAATGGCCAATCCCTTTACATCCCGGGGTTGAGCATCCACCAT +
Preference number: 5 (lower is better)
Translates to: RDSWQHCEGPDVSLS*NGQSLYIPGLSIHH
Trigger: ATGGTGGATGCTCAACCCCGGGATGTAAAGGGATTGGCCATTTCAAGAGAGCGAGACATCTGGGCCCTCACAGTGCTGCCAACTGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 90 bp GTTATATGGAAAGGATTGATGCTCCTTGAACAGCTTCGCCGGCACTaGCACCGCTTTCTCCTCTTCCAGGTAGGATGCCCAGCACCACGC +
Preference number: 5 (lower is better)
Translates to: VIWKGLMLLEQLRRH*HRFLLFQVGCPAPR
Trigger: GCGTGGTGCTGGGCATCCTACCTGGAAGAGGAGAAAGCGGTGGCAGTGCCGGCGAAGCTGTTCAAGGAGCATCAATCCTTTCCATATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS GCA 90 bp CTGCGCCTTCGCCGCTGGAAAGCAGCAATAAAGCCGGGTGGCAAATaGAGCTGCCCGCAGATCCTGTTTCAGGTGCATCTTTTCAATAGC +
Preference number: 5 (lower is better)
Translates to: LRLRRWKAAIKPGGK*SCPQILFQVHLFNS
Trigger: GCTATTGAAAAGATGCACCTGAAACAGGATCTGCGGGCAGCTGCATTTGCCACCCGGCTTTATTGCTGCTTTCCAGCGGCGAAGGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS GCA 90 bp CACCTCGTCTGTGCTCCATTTGGAAACTTTACTGGCAGGGATTCCTaGGACAGTTGGAAGAAGTTTGCTTTGCTGCTCCCAGCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: HLVCAPFGNFTGRDS*DSWKKFALLLPAQG
Trigger: CCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 90 bp TTACTGGCAGGGATTCCTGCGACAGTTGGAAGAAGTTTGCTTTGCTaGTCCCAGCGCAAGGGCAGACATGGAATTGGGGACTTAAAGGAC +
Preference number: 5 (lower is better)
Translates to: LLAGIPATVGRSLLC*SQRKGRHGIGDLKD
Trigger: GTCCTTTAAGTCCCCAATTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 90 bp TGGAAACTTTACTGGCAGGGATTCCTGCGACAGTTGGAAGAAGTTTaGTTTGCTGCTCCCAGCGCAAGGGCAGACATGGAATTGGGGACT +
Preference number: 5 (lower is better)
Translates to: WKLYWQGFLRQLEEV*FAAPSARADMELGT
Trigger: AGTCCCCAATTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 90 bp ACTTTACTGGCAGGGATTCCTGCGACAGTTGGAAGAAGTTTGCTTTaGTGCTCCCAGCGCAAGGGCAGACATGGAATTGGGGACTTAAAG +
Preference number: 5 (lower is better)
Translates to: TLLAGIPATVGRSLL*CSQRKGRHGIGDLK
Trigger: CTTTAAGTCCCCAATTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTAGAGGTCGGGGCTTCTaGAGCAGTTGGTACCATCCA +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVRGRGF*SSWYHP
Trigger: TGGATGGTACCAACTGCTCAAGAAGCCCCGACCTCT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTGGAAGAAGTTTGCTTaGCTGCTCCCAGCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVWKKFA*LLPAQG
Trigger: CCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS TCA 90 bp CGGTATCCACAAACCTCCGCGACGGTGAGGACACAGTACACAGACTaGTGCTCAGGATCCACGCCTTCTAATTTCATGCCAACTTTGAAT +
Preference number: 5 (lower is better)
Translates to: RYPQTSATVRTQYTD*CSGSTPSNFMPTLN
Trigger: ATTCAAAGTTGGCATGAAATTAGAAGGCGTGGATCCTGAGCATCAGTCTGTGTACTGTGTCCTCACCGTCGCGGAGGTTTGTGGATACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS-3UTR CAA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATAGACTTCTTGAGCAGTaGGTACCATCCAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GSCKHRGTKMSETDATQNRLLEQ*VPSKWW
Trigger: CCACCACTTGGATGGTACCAACTGCTCAAGAAGTCT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368139.6
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTTTGGAGGATGGAGTTaGTGGCCGGTTTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVFGGWS*WPVFSH
Trigger: GTGTGAGAAAACCGGCCACAAACTCCATCCTCCAAA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTCTTCTCCATCCTCCTaGGTGTCAGCTTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVSSPSS*VSAFRD
Trigger: ATCTCTGAAAGCTGACACCAAGGAGGATGGAGAAGA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCTTCTTTATACCCTTTaGGAGGATGGAGTTTGTGGC +
Preference number: 5 (lower is better)
Translates to: GSCKHRGTKMSETDATQNLLYTL*EDGVCG
Trigger: GCCACAAACTCCATCCTCCAAAAGGGTATAAAGAAG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATCCAAAACGGAGGTTCTaGGGCAATTACTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GSCKHRGTKMSETDATQNPKRRF*GNYFGK
Trigger: TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGG...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAGGGCTTCTTGAGCAGTaGGTACCATCCAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSGLLEQ*VPSKWW
Trigger: CCACCACTTGGATGGTACCAACTGCTCAAGAAGCCC...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTCTTCTTTATACCCTTTaGGAGGATGGAGTTTGTGGC +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVLLYTL*EDGVCG
Trigger: GCCACAAACTCCATCCTCCAAAAGGGTATAAAGAAG...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTGTACCAGGAAACGATaGTCCACCATATCTGTTACC +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVCTRKR*STISVT
Trigger: GGTAACAGATATGGTGGACAATCGTTTCCTGGTACA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATAACATAGGGTTCCTTTaGTCTACAACCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GSCKHRGTKMSETDATQNNIGFL*STTSSF
Trigger: GAAGCTTGAGGTTGTAGACAAAAGGAACCCTATGTT...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCTCTTGTAAACACCGGGGCACCAAGATGAGTGAGACTGATGCCACTCAAAATTCTTCAAAGTCTTCTTaGACATCATCAGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: GSCKHRGTKMSETDATQNSSKSS*TSSACW
Trigger: CCAGCATGCTGATGATGTCAAAGAAGACTTTGAAGA...ATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCCCCGGTGTTTACAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATGGAAGAAGTTTGCTTaGCTGCTCCCAGCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSWKKFA*LLPAQG
Trigger: CCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS TCA 90 bp TCTCACAGAACTGAAGCCCTTCTACTTTCACTGGATCCTTCAACCTaGAAGGCATCCCAGTCTTCTCTGAAAAGACTTCTTGAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SHRTEALLLSLDPST*KASQSSLKRLLEQL
Trigger: CAACTGCTCAAGAAGTCTTTTCAGAGAAGACTGGGATGCCTTTCAGGTTGAAGGATCCAGTGAAAGTAGAAGGGCTTCAGTTCTGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGGGCTTCTTGAGCAGTaGGTACCATCCAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFGLLEQ*VPSKWW
Trigger: CCACCACTTGGATGGTACCAACTGCTCAAGAAGCCC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361794.7
ENST00000368136.3
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTAATGAGGGATTCTTTTaGTCTACTGCCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVNEGFF*STASSF
Trigger: GAAGCTTGAGGCAGTAGACAAAAAGAATCCCTCATT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTAACATAGGGTTCCTTTaGTCTACAACCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVNIGFL*STTSSF
Trigger: GAAGCTTGAGGTTGTAGACAAAAGGAACCCTATGTT...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACTTTACATCCCGGGGTaGAGCATCCACCATGTTCTG +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKLYIPG*SIHHVL
Trigger: CAGAACATGGTGGATGCTCAACCCCGGGATGTAAAG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTGGAAGAAGTTTGCTTaGCTGCTCCCAGCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFWKKFA*LLPAQG
Trigger: CCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAACAGTTGGAAGAAGTTaGCTTTGCTGCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSTVGRS*LCCSQR
Trigger: GCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAACAGTTGGAAGAAGTTaGCTTTGCTGCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKTVGRS*LCCSQR
Trigger: GCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTTCGTCTGTGCTCCATTaGGAAACTTTACTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPSSVLH*ETLLAG
Trigger: CCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACGA...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTTCTTCTCTGCAGCTTaGAACATCAGGATGGAATTG +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVFFSAA*NIRMEL
Trigger: CAATTCCATCCTGATGTTCAAAGCTGCAGAGAAGAA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TGGGTTTGGAGGACAATGCATGACCTGAGACAGCGCTCTGTACAGATTAGTGTTTTGCTCCTTCACACCTaGTCTTTTCAGCAAAATCAC +
Preference number: 5 (lower is better)
Translates to: WVWRTMHDLRQRSVQISVLLLHT*SFQQNH
Trigger: GTGATTTTGCTGAAAAGACAAGGTGTGAAGGAGCAA...AACACTAATCTGTACAGAGCGCTGTCTCAGGTCATGCATTGTCCTCCAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS TCA 90 bp TCTCACCACTTAAGCGGTCTGGAAAAATACGGTCTTTATTCAAATTaGTTTCTGAATAGGGACAGTTGGCAGCACTGTGAGGGCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SHHLSGLEKYGLYSN*FLNRDSWQHCEGPD
Trigger: ATCTGGGCCCTCACAGTGCTGCCAACTGTCCCTATTCAGAAATCAATTTGAATAAAGACCGTATTTTTCCAGACCGCTTAAGTGGTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTTCTTCTCCATCCTCCTaGGTGTCAGCTTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPSSPSS*VSAFRD
Trigger: ATCTCTGAAAGCTGACACCAAGGAGGATGGAGAAGA...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATTTGGAGGATGGAGTTaGTGGCCGGTTTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSFGGWS*WPVFSH
Trigger: GTGTGAGAAAACCGGCCACAAACTCCATCCTCCAAA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATTTGGAGGATGGAGTTaGTGGCCGGTTTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKFGGWS*WPVFSH
Trigger: GTGTGAGAAAACCGGCCACAAACTCCATCCTCCAAA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCTTTACATCCCGGGGTaGAGCATCCACCATGTTCTG +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFLYIPG*SIHHVL
Trigger: CAGAACATGGTGGATGCTCAACCCCGGGATGTAAAG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATGGAAGAAGTTTGCTTaGCTGCTCCCAGCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIWKKFA*LLPAQG
Trigger: CCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTACAGTTGGAAGAAGTTaGCTTTGCTGCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFTVGRS*LCCSQR
Trigger: GCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTGGATTCCTGCGACAGTaGGAAGAAGTTTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPGFLRQ*EEVCFA
Trigger: AGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCC...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAATCGTCTGTGCTCCATTaGGAAACTTTACTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWESSVLH*ETLLAG
Trigger: CCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACGA...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCGTCTGTGCTCCATTaGGAAACTTTACTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKSSVLH*ETLLAG
Trigger: CCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACGA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS GCA 90 bp GTTCCAGCCATCAAAGTGAACTTTTACCCGGTGATCATCTGTGTCTaGCACAGTTGCTACTCTAATAAACATAGGGTTCCTTTTGTCTAC +
Preference number: 5 (lower is better)
Translates to: VPAIKVNFYPVIICV*HSCYSNKHRVPFVY
Trigger: GTAGACAAAAGGAACCCTATGTTTATTAGAGTAGCAACTGTGGCAGACACAGATGATCACCGGGTAAAAGTTCACTTTGATGGCTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGAACACATCAAACTCTaGACCACTTGTGCTAGAGGC +
Preference number: 5 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEEHIKL*TTCARG
Trigger: GCCTCTAGCACAAGTGGTCAAGAGTTTGATGTGTTC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTGGATCTTCTTCCTCATaGTCTTCTTCTACGTCCCTT +
Preference number: 5 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPGSSSS*SSSTSL
Trigger: AAGGGACGTAGAAGAAGACAATGAGGAAGAAGATCC...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATCTTCTCCATCCTCCTaGGTGTCAGCTTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSSSPSS*VSAFRD
Trigger: ATCTCTGAAAGCTGACACCAAGGAGGATGGAGAAGA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTTTACATCCCGGGGTaGAGCATCCACCATGTTCTG +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILYIPG*SIHHVL
Trigger: CAGAACATGGTGGATGCTCAACCCCGGGATGTAAAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAACAGTTGGAAGAAGTTaGCTTTGCTGCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFITVGRS*LCCSQR
Trigger: GCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTCCAAAACGGAGGTTCTaGGGCAATTACTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPPKRRF*GNYFGK
Trigger: TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGG...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGGATCTTCTTCCTCATaGTCTTCTTCTACGTCCCTT +
Preference number: 5 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEGSSSS*SSSTSL
Trigger: AAGGGACGTAGAAGAAGACAATGAGGAAGAAGATCC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATTTGGAGGATGGAGTTaGTGGCCGGTTTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIFGGWS*WPVFSH
Trigger: GTGTGAGAAAACCGGCCACAAACTCCATCCTCCAAA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAACTTCTTTATACCCTTTaGGAGGATGGAGTTTGTGGC +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKLLYTL*EDGVCG
Trigger: GCCACAAACTCCATCCTCCAAAAGGGTATAAAGAAG...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATGTACCAGGAAACGATaGTCCACCATATCTGTTACC +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKCTRKR*STISVT
Trigger: GGTAACAGATATGGTGGACAATCGTTTCCTGGTACA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATGTACCAGGAAACGATaGTCCACCATATCTGTTACC +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSCTRKR*STISVT
Trigger: GGTAACAGATATGGTGGACAATCGTTTCCTGGTACA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAGATGTCTCGCTCTCTaGAAATGGCCAATCCCTTTA +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKRCLAL*KWPIPL
Trigger: TAAAGGGATTGGCCATTTCAAGAGAGCGAGACATCT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp AAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCTTCTTCAAAGTCTTCTTaGACATCATCAGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: KGILPKRRFLGNYFGKSPSSKSS*TSSACW
Trigger: CCAGCATGCTGATGATGTCAAAGAAGACTTTGAAGA...AGGTGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGGATTCCTGCGACAGTaGGAAGAAGTTTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFGFLRQ*EEVCFA
Trigger: AGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCGTCTGTGCTCCATTaGGAAACTTTACTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISSVLH*ETLLAG
Trigger: CCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCTTGGGCAATTACTTaGGGAAATCACCTCCCTGAT +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKSWAIT*GNHLPD
Trigger: ATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAGA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCATCTTGGGCAATTACTTaGGGAAATCACCTCCCTGAT +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSSWAIT*GNHLPD
Trigger: ATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAGA...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACCAAAACGGAGGTTCTaGGGCAATTACTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSPKRRF*GNYFGK
Trigger: TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGG...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAGACTTCTTGAGCAGTaGGTACCATCCAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIRLLEQ*VPSKWW
Trigger: CCACCACTTGGATGGTACCAACTGCTCAAGAAGTCT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 90 bp ATCAAAGTGAACTTTTACCCGGTGATCATCTGTGTCTGCCACAGTTaGTACTCTAATAAACATAGGGTTCCTTTTGTCTACAACCTCAAG +
Preference number: 5 (lower is better)
Translates to: IKVNFYPVIICVCHS*YSNKHRVPFVYNLK
Trigger: CTTGAGGTTGTAGACAAAAGGAACCCTATGTTTATTAGAGTAGCAACTGTGGCAGACACAGATGATCACCGGGTAAAAGTTCACTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
ENST00000533890.1
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGAACACATCAAACTCTaGACCACTTGTGCTAGAGGC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIEHIKL*TTCARG
Trigger: GCCTCTAGCACAAGTGGTCAAGAGTTTGATGTGTTC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCTTCTCCATCCTCCTaGGTGTCAGCTTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISSPSS*VSAFRD
Trigger: ATCTCTGAAAGCTGACACCAAGGAGGATGGAGAAGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAATGAGGGATTCTTTTaGTCTACTGCCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKNEGFF*STASSF
Trigger: GAAGCTTGAGGCAGTAGACAAAAAGAATCCCTCATT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAAACATAGGGTTCCTTTaGTCTACAACCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKNIGFL*STTSSF
Trigger: GAAGCTTGAGGTTGTAGACAAAAGGAACCCTATGTT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAGATGTCTCGCTCTCTaGAAATGGCCAATCCCTTTA +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFRCLAL*KWPIPL
Trigger: TAAAGGGATTGGCCATTTCAAGAGAGCGAGACATCT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGATTCCTGCGACAGTaGGAAGAAGTTTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGFLRQ*EEVCFA
Trigger: AGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATTGCTCCTTCACACCTaGTCTTTTCAGCAAAATCAC +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKLLLHT*SFQQNH
Trigger: GTGATTTTGCTGAAAAGACAAGGTGTGAAGGAGCAA...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTTCTTGGGCAATTACTTaGGGAAATCACCTCCCTGAT +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFSWAIT*GNHLPD
Trigger: ATCAGGGAGGTGATTTCCCAAAGTAATTGCCCAAGA...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGGATCTTCTTCCTCATaGTCTTCTTCTACGTCCCTT +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIGSSSS*SSSTSL
Trigger: AAGGGACGTAGAAGAAGACAATGAGGAAGAAGATCC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAGTTATATGGAAAGGATaGATGCTCCTTGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKVIWKG*MLLEQL
Trigger: AAGCTGTTCAAGGAGCATCAATCCTTTCCATATAAC...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp TACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAGTTATATGGAAAGGATaGATGCTCCTTGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: YRKRNPSKTEVLGQLLWEVIWKG*MLLEQL
Trigger: AAGCTGTTCAAGGAGCATCAATCCTTTCCATATAAC...TTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACTTCTTTATACCCTTTaGGAGGATGGAGTTTGTGGC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFILLYTL*EDGVCG
Trigger: GCCACAAACTCCATCCTCCAAAAGGGTATAAAGAAG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTAATGAGGGATTCTTTTaGTCTACTGCCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFNEGFF*STASSF
Trigger: GAAGCTTGAGGCAGTAGACAAAAAGAATCCCTCATT...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATGTACCAGGAAACGATaGTCCACCATATCTGTTACC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFICTRKR*STISVT
Trigger: GGTAACAGATATGGTGGACAATCGTTTCCTGGTACA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAGATGTCTCGCTCTCTaGAAATGGCCAATCCCTTTA +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIRCLAL*KWPIPL
Trigger: TAAAGGGATTGGCCATTTCAAGAGAGCGAGACATCT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp ACAGAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAAATGGAATTGAAAATTTaGAGAGCAGGGCCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: TEKGILPKRRFLGNYFGKMELKI*RAGPSL
Trigger: TAAACTGGGCCCTGCTCTCAAAATTTTCAATTCCAT...TTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCAATGGAATTGAAAATTTaGAGAGCAGGGCCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSMELKI*RAGPSL
Trigger: TAAACTGGGCCCTGCTCTCAAAATTTTCAATTCCAT...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GAAAAAGGAATCCTTCCAAAACGGAGGTTCTTGGGCAATTACTTTGGGAAATCACAGGATTCTTACATCTaGTTTGTTCTCCATTTCATC +
Preference number: 5 (lower is better)
Translates to: EKGILPKRRFLGNYFGKSQDSYI*FVLHFI
Trigger: GATGAAATGGAGAACAAACAAGATGTAAGAATCCTG...TGATTTCCCAAAGTAATTGCCCAAGAACCTCCGTTTTGGAAGGATTCCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTGTTATATGGAAAGGATaGATGCTCCTTGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFVIWKG*MLLEQL
Trigger: AAGCTGTTCAAGGAGCATCAATCCTTTCCATATAAC...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAATGAGGGATTCTTTTaGTCTACTGCCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFINEGFF*STASSF
Trigger: GAAGCTTGAGGCAGTAGACAAAAAGAATCCCTCATT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAAACATAGGGTTCCTTTaGTCTACAACCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFINIGFL*STTSSF
Trigger: GAAGCTTGAGGTTGTAGACAAAAGGAACCCTATGTT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATCTTCAAAGTCTTCTTaGACATCATCAGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFISSKSS*TSSACW
Trigger: CCAGCATGCTGATGATGTCAAAGAAGACTTTGAAGA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATATTCTTCTCTGCAGCTTaGAACATCAGGATGGAATTG +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIFFSAA*NIRMEL
Trigger: CAATTCCATCCTGATGTTCAAAGCTGCAGAGAAGAA...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp GGCACCAAGATGAGTGAGACTGATGCCACTCAAAATACACTACCTAATTTATTTCAGGATTCTTACATCTaGTTTGTTCTCCATTTCATC +
Preference number: 5 (lower is better)
Translates to: GTKMSETDATQNTLPNLFQDSYI*FVLHFI
Trigger: GATGAAATGGAGAACAAACAAGATGTAAGAATCCTG...AAATAAATTAGGTAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAGTTATATGGAAAGGATaGATGCTCCTTGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIVIWKG*MLLEQL
Trigger: AAGCTGTTCAAGGAGCATCAATCCTTTCCATATAAC...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATAATGGAATTGAAAATTTaGAGAGCAGGGCCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIMELKI*RAGPSL
Trigger: TAAACTGGGCCCTGCTCTCAAAATTTTCAATTCCAT...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 90 bp ATTCAGAATTCACCATCTTCAAAGTTCATTGTGAGAATTCTTCTCTaGAGCTTTGAACATCAGGATGGAATTGAAAATTTTGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: IQNSPSSKFIVRILL*SFEHQDGIENFESR
Trigger: CCTGCTCTCAAAATTTTCAATTCCATCCTGATGTTCAAAGCTGCAGAGAAGAATTCTCACAATGAACTTTGAAGATGGTGAATTCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS-3UTR CAA 90 bp CAAAAGATGACTGTTGTTAGACAGTACCTGGTTAAAAGCTCAAGCACTTTCATACAGGATTCTTACATCTaGTTTGTTCTCCATTTCATC +
Preference number: 5 (lower is better)
Translates to: QKMTVVRQYLVKSSSTFIQDSYI*FVLHFI
Trigger: GATGAAATGGAGAACAAACAAGATGTAAGAATCCTG...TATGAAAGTGCTTGAGCTTTTAACCAGGTACTGTCTAACAACAGTCATCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 72 bp CTGCGCTGGTGCCGGTGCCGCCGCCGCCGCCGCCGCTaGCGGGGAGGCTCGCTCTGGCTTCCCTGTTACTGC +
Preference number: 6 (lower is better)
Translates to: LRWCRCRRRRRR*RGGSLWLPCYC
Trigger: GCAGTAACAGGGAAGCCAGAGCGAGCCTCCCCGGCAGCGGCGGCGGCGGCGGCGGCACCGGCACCAGCGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS CCA 72 bp CGCCGCCGCCGCCGCCGCTGCCGGGGAGGCTCGCTCTaGCTTCCCTGTTACTGCTGCTGCGCCTTCGCCGCT +
Preference number: 6 (lower is better)
Translates to: RRRRRRCRGGSL*LPCYCCCAFAA
Trigger: AGCGGCGAAGGCGCAGCAGCAGTAACAGGGAAGCCAGAGCGAGCCTCCCCGGCAGCGGCGGCGGCGGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS TCA 72 bp CGCCCTGGAAAGCGGCTAGTTACCCCCACCTCCCTCTaGGCGCGACGGACAGACCGACGCCCCCAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RPGKRLVTPTSL*ARRTDRRPQPS
Trigger: GGAGGGCTGGGGGCGTCGGTCTGTCCGTCGCGCTCAGAGGGAGGTGGGGGTAACTAGCCGCTTTCCAGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368139.6
ENST00000526019.5
CDS CCA 72 bp ATTTCTCCTAAGGGTTCTCCGTCTCCCGTGGAAGGGTaGGGTAGAGCCGCGGTCCCCGCGCCCTGGAAAGCG +
Preference number: 6 (lower is better)
Translates to: ISPKGSPSPVEG*GRAAVPAPWKA
Trigger: CGCTTTCCAGGGCGCGGGGACCGCGGCTCTACCCCACCCTTCCACGGGAGACGGAGAACCCTTAGGAGAAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368136.3
ENST00000526019.5
CDS GCA 72 bp GTAGTCCTGACAAATGGTCCAGGGCTGCGGGCGCAATaGGCATGTGCGCGTAGAGTCAGGGCTGGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: VVLTNGPGLRAQ*ACARRVRAGER
Trigger: CCTCTCCCCAGCCCTGACTCTACGCGCACATGCGCATTGCGCCCGCAGCCCTGGACCATTTGTCAGGACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS CCA 72 bp GAAAGACAGCTGACCGACGCTGTGCCTGCTGGACGGTaGGTTCTTCCCGGGCACCTCTGGCTTCATGTGATG +
Preference number: 6 (lower is better)
Translates to: ERQLTDAVPAGR*VLPGHLWLHVM
Trigger: CATCACATGAAGCCAGAGGTGCCCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTCAGCTGTCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CCA 72 bp AAGGACAGAAAGACAGCTGACCGACGCTGTGCCTGCTaGACGGTGGGTTCTTCCCGGGCACCTCTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: KDRKTADRRCAC*TVGSSRAPLAS
Trigger: TGAAGCCAGAGGTGCCCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 72 bp TTAAAGGACAGAAAGACAGCTGACCGACGCTGTGCCTaGTGGACGGTGGGTTCTTCCCGGGCACCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: LKDRKTADRRCA*WTVGSSRAPLA
Trigger: AGCCAGAGGTGCCCGGGAAGAACCCACCGTCCAGCAGGCACAGCGTCGGTCAGCTGTCTTTCTGTCCTTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CCA 72 bp GCGCCTTCGCCGCTGGAAAGCAGCAATAAAGCCGGGTaGCAAATGCAGCTGCCCGCAGATCCTGTTTCAGGT +
Preference number: 6 (lower is better)
Translates to: APSPLESSNKAG*QMQLPADPVSG
Trigger: ACCTGAAACAGGATCTGCGGGCAGCTGCATTTGCCACCCGGCTTTATTGCTGCTTTCCAGCGGCGAAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS CCA 72 bp CTGGCTTCCCTGTTACTGCTGCTGCGCCTTCGCCGCTaGAAAGCAGCAATAAAGCCGGGTGGCAAATGCAGC +
Preference number: 6 (lower is better)
Translates to: LASLLLLLRLRR*KAAIKPGGKCS
Trigger: GCTGCATTTGCCACCCGGCTTTATTGCTGCTTTCCAGCGGCGAAGGCGCAGCAGCAGTAACAGGGAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS TCA 72 bp TGGCAGCACTGTGAGGGCCCAGATGTCTCGCTCTCTTaGAATGGCCAATCCCTTTACATCCCGGGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: WQHCEGPDVSLS*NGQSLYIPGLS
Trigger: GCTCAACCCCGGGATGTAAAGGGATTGGCCATTTCAAGAGAGCGAGACATCTGGGCCCTCACAGTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 72 bp CGGCACTGCCACCGCTTTCTCCTCTTCCAGGTAGGATaGCCAGCACCACGCTTTCTTTCCTTTAGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: RHCHRFLLFQVG*PAPRFLSFRRQ
Trigger: TTGCCTCCTAAAGGAAAGAAAGCGTGGTGCTGGGCATCCTACCTGGAAGAGGAGAAAGCGGTGGCAGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS GCA 72 bp CGCCGCTGGAAAGCAGCAATAAAGCCGGGTGGCAAATaGAGCTGCCCGCAGATCCTGTTTCAGGTGCATCTT +
Preference number: 6 (lower is better)
Translates to: RRWKAAIKPGGK*SCPQILFQVHL
Trigger: AAGATGCACCTGAAACAGGATCTGCGGGCAGCTGCATTTGCCACCCGGCTTTATTGCTGCTTTCCAGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS GCA 72 bp AAAGGATTGATGCTCCTTGAACAGCTTCGCCGGCACTaGCACCGCTTTCTCCTCTTCCAGGTAGGATGCCCA +
Preference number: 6 (lower is better)
Translates to: KGLMLLEQLRRH*HRFLLFQVGCP
Trigger: TGGGCATCCTACCTGGAAGAGGAGAAAGCGGTGGCAGTGCCGGCGAAGCTGTTCAAGGAGCATCAATCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS GCA 72 bp GCAGGGATTCCTGCGACAGTTGGAAGAAGTTTGCTTTaGTGCTCCCAGCGCAAGGGCAGACATGGAATTGGG +
Preference number: 6 (lower is better)
Translates to: AGIPATVGRSLL*CSQRKGRHGIG
Trigger: CCCAATTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 72 bp GTGGCAAATGCAGCTGCCCGCAGATCCTGTTTCAGGTaGATCTTTTCAATAGCCCGGTCACCGCCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: VANAAARRSCFR*IFSIARSPPQS
Trigger: ACTCTGAGGCGGTGACCGGGCTATTGAAAAGATGCACCTGAAACAGGATCTGCGGGCAGCTGCATTTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674039.1
CDS CAA 72 bp GGCAGGGATTCCTGCGACAGTTGGAAGAAGTTTGCTTaGCTGCTCCCAGCGCAAGGGCAGACATGGAATTGG +
Preference number: 6 (lower is better)
Translates to: GRDSCDSWKKFA*LLPAQGQTWNW
Trigger: CCAATTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 72 bp TACTGGCAGGGATTCCTGCGACAGTTGGAAGAAGTTTaGTTTGCTGCTCCCAGCGCAAGGGCAGACATGGAA +
Preference number: 6 (lower is better)
Translates to: YWQGFLRQLEEV*FAAPSARADME
Trigger: TTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CAA 72 bp TTACTGGCAGGGATTCCTGCGACAGTTGGAAGAAGTTaGCTTTGCTGCTCCCAGCGCAAGGGCAGACATGGA +
Preference number: 6 (lower is better)
Translates to: LLAGIPATVGRS*LCCSQRKGRHG
Trigger: TCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CCA 72 bp ATGGAGTTTGTGGCCGGTTTTCTCACACCACCCAACTaGGTGGATATCCAGAGCGTCTGCATTCACCCAGAA +
Preference number: 6 (lower is better)
Translates to: MEFVAGFLTPPN*VDIQSVCIHPE
Trigger: TTCTGGGTGAATGCAGACGCTCTGGATATCCACCCAGTTGGGTGGTGTGAGAAAACCGGCCACAAACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS CAA 90 bp TTGGAAACTTTACTGGCAGGGATTCCTGCGACAGTTGGAAGAAGTTaGCTTTGCTGCTCCCAGCGCAAGGGCAGACATGGAATTGGGGAC +
Preference number: 6 (lower is better)
Translates to: LETLLAGIPATVGRS*LCCSQRKGRHGIGD
Trigger: GTCCCCAATTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CAA 90 bp CTGTGCTCCATTTGGAAACTTTACTGGCAGGGATTCCTGCGACAGTaGGAAGAAGTTTGCTTTGCTGCTCCCAGCGCAAGGGCAGACATG +
Preference number: 6 (lower is better)
Translates to: LCSIWKLYWQGFLRQ*EEVCFAAPSARADM
Trigger: CATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAATGGAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CCA 72 bp TTTGGAAACTTTACTGGCAGGGATTCCTGCGACAGTTaGAAGAAGTTTGCTTTGCTGCTCCCAGCGCAAGGG +
Preference number: 6 (lower is better)
Translates to: FGNFTGRDSCDS*KKFALLLPAQG
Trigger: CCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CAA 90 bp AACTTTACTGGCAGGGATTCCTGCGACAGTTGGAAGAAGTTTGCTTaGCTGCTCCCAGCGCAAGGGCAGACATGGAATTGGGGACTTAAA +
Preference number: 6 (lower is better)
Translates to: NFTGRDSCDSWKKFA*LLPAQGQTWNWGLK
Trigger: TTTAAGTCCCCAATTCCATGTCTGCCCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CAA 90 bp CTTTCGGCGGTGATGAAACACAGAACTCTCTGGCGATCTTCACAATaGCTGTCCACTCTCAAGATTTCTCCTAAGGGTTCTCCGTCTCCC +
Preference number: 6 (lower is better)
Translates to: LSAVMKHRTLWRSSQ*LSTLKISPKGSPSP
Trigger: GGGAGACGGAGAACCCTTAGGAGAAATCTTGAGAGTGGACAGCAATTGTGAAGATCGCCAGAGAGTTCTGTGTTTCATCACCGCCGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368136.3
ENST00000526019.5
CDS GCA 72 bp ATTAGAGATAAGCACACACTTGACAACCACAAGAACTaGACACTCTCTGCACCTCCTGCTCAAAGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: IRDKHTLDNHKN*TLSAPPAQRPS
Trigger: GCTGGGCCTTTGAGCAGGAGGTGCAGAGAGTGTGCAGTTCTTGTGGTTGTCAAGTGTGTGCTTATCTCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533890.1
CDS CCA 72 bp CTGACACCTCGTCTGTGCTCCATTTGGAAACTTTACTaGCAGGGATTCCTGCGACAGTTGGAAGAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: LTPRLCSIWKLY*QGFLRQLEEVC
Trigger: GCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACGAGGTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CAA 72 bp ATTTGGAAACTTTACTGGCAGGGATTCCTGCGACAGTaGGAAGAAGTTTGCTTTGCTGCTCCCAGCGCAAGG +
Preference number: 6 (lower is better)
Translates to: IWKLYWQGFLRQ*EEVCFAAPSAR
Trigger: CCTTGCGCTGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 72 bp TGTGCTCCATTTGGAAACTTTACTGGCAGGGATTCCTaGGACAGTTGGAAGAAGTTTGCTTTGCTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: CAPFGNFTGRDS*DSWKKFALLLP
Trigger: TGGGAGCAGCAAAGCAAACTTCTTCCAACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAATGGAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS CCA 72 bp ACAGTTCTCACAGAACTGAAGCCCTTCTACTTTCACTaGATCCTTCAACCTGAAAGGCATCCCAGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: TVLTELKPFYFH*ILQPERHPSLL
Trigger: GAGAAGACTGGGATGCCTTTCAGGTTGAAGGATCCAGTGAAAGTAGAAGGGCTTCAGTTCTGTGAGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000526087.5
ENST00000528385.5
ENST00000533560.5
CDS CCA 72 bp TCTTCTTCTTTATACCCTTTTGGAGGATGGAGTTTGTaGCCGGTTTTCTCACACCACCCAACTGGGTGGATA +
Preference number: 6 (lower is better)
Translates to: SSSLYPFGGWSL*PVFSHHPTGWI
Trigger: TATCCACCCAGTTGGGTGGTGTGAGAAAACCGGCCACAAACTCCATCCTCCAAAAGGGTATAAAGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS CAA 72 bp AATTCTTCTTCTTTATACCCTTTTGGAGGATGGAGTTaGTGGCCGGTTTTCTCACACCACCCAACTGGGTGG +
Preference number: 6 (lower is better)
Translates to: NSSSLYPFGGWS*WPVFSHHPTGW
Trigger: CCACCCAGTTGGGTGGTGTGAGAAAACCGGCCACAAACTCCATCCTCCAAAAGGGTATAAAGAAGAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS CAA 90 bp CTTTCGGCGGTGATGAAACACAGAACTCTCTGGCGATCTTCACAATaGCTGTCCACTCTCAAGATTTCTCCTAAGGGTTCCCCAAATTTT +
Preference number: 6 (lower is better)
Translates to: LSAVMKHRTLWRSSQ*LSTLKISPKGSPNF
Trigger: AAAATTTGGGGAACCCTTAGGAGAAATCTTGAGAGTGGACAGCAATTGTGAAGATCGCCAGAGAGTTCTGTGTTTCATCACCGCCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361794.7
ENST00000526087.5
ENST00000533560.5
ENST00000674039.1
CDS CAA 90 bp ACCATATCTGTTACCGTAGCAACACAGATGAATGAGGGATTCTTTTaGTCTACTGCCTCAAGCTTCATACCAACTCGAAAGCCCGATGGG +
Preference number: 6 (lower is better)
Translates to: TISVTVATQMNEGFF*STASSFIPTRKPDG
Trigger: CCCATCGGGCTTTCGAGTTGGTATGAAGCTTGAGGCAGTAGACAAAAAGAATCCCTCATTCATCTGTGTTGCTACGGTAACAGATATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
ENST00000533890.1
CDS CAA 90 bp CTTTCGGCGGTGATGAAACACAGAACTCTCTGGCGATCTTCACAATaGCTGTCCACTCTCAAGATTTCTCCTAAGGGTTTTGTACTTCTC +
Preference number: 6 (lower is better)
Translates to: LSAVMKHRTLWRSSQ*LSTLKISPKGFVLL
Trigger: GAGAAGTACAAAACCCTTAGGAGAAATCTTGAGAGTGGACAGCAATTGTGAAGATCGCCAGAGAGTTCTGTGTTTCATCACCGCCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528385.5
CDS CAA 72 bp CTCTGTATAAATTCTGACACCTCGTCTGTGCTCCATTaGGAAACTTTACTGGCAGGGATTCCTGCGACAGTT +
Preference number: 6 (lower is better)
Translates to: LCINSDTSSVLH*ETLLAGIPATV
Trigger: AACTGTCGCAGGAATCCCTGCCAGTAAAGTTTCCAAATGGAGCACAGACGAGGTGTCAGAATTTATACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS GCA 72 bp TGCAATAGTTTCCTCCAGAAAGACACTCATCTACGTTaGCATACTGACAACAGTTCTCACAGAACTGAAGCC +
Preference number: 6 (lower is better)
Translates to: CNSFLQKDTHLR*HTDNSSHRTEA
Trigger: GGCTTCAGTTCTGTGAGAACTGTTGTCAGTATGGCAACGTAGATGAGTGTCTTTCTGGAGGAAACTATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000528385.5
ENST00000533560.5
CDS CCA 72 bp TTTAACCTTTCGGCGGTGATGAAACACAGAACTCTCTaGCGATCTTCACAATTGCTGTCCACTCTCAAGATT +
Preference number: 6 (lower is better)
Translates to: FNLSAVMKHRTL*RSSQLLSTLKI
Trigger: AATCTTGAGAGTGGACAGCAATTGTGAAGATCGCCAGAGAGTTCTGTGTTTCATCACCGCCGAAAGGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000526019.5
ENST00000526087.5
ENST00000528385.5
ENST00000533560.5
ENST00000674039.1
CDS CCA 72 bp TACTGCCTCAAGCTTCATACCAACTCGAAAGCCCGATaGGATCACTGTCTATGGAAACACACAGATTTAATT +
Preference number: 6 (lower is better)
Translates to: YCLKLHTNSKAR*DHCLWKHTDLI
Trigger: AATTAAATCTGTGTGTTTCCATAGACAGTGATCCCATCGGGCTTTCGAGTTGGTATGAAGCTTGAGGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533890.1
CDS CAA 72 bp GTTACCGTAGCAACACAGATGAATGAGGGATTCTTTTaGTCTACTGCCTCAAGCTTCATACCAACTCGAAAG +
Preference number: 6 (lower is better)
Translates to: VTVATQMNEGFF*STASSFIPTRK
Trigger: CTTTCGAGTTGGTATGAAGCTTGAGGCAGTAGACAAAAAGAATCCCTCATTCATCTGTGTTGCTACGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
ENST00000533890.1
CDS TCA 72 bp TCTTTCCAGTCCATAACACTGAACACATCAAACTCTTaGCCACTTGTGCTAGAGGCAGATTCAGTCATGATT +
Preference number: 6 (lower is better)
Translates to: SFQSITLNTSNS*PLVLEADSVMI
Trigger: AATCATGACTGAATCTGCCTCTAGCACAAGTGGTCAAGAGTTTGATGTGTTCAGTGTTATGGACTGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000526087.5
ENST00000528385.5
ENST00000533560.5
CDS GCA 72 bp ATCAAAGTGAACTTTTACCCGGTGATCATCTGTGTCTaGCACAGTTGCTACTCTAATAAACATAGGGTTCCT +
Preference number: 6 (lower is better)
Translates to: IKVNFYPVIICV*HSCYSNKHRVP
Trigger: AGGAACCCTATGTTTATTAGAGTAGCAACTGTGGCAGACACAGATGATCACCGGGTAAAAGTTCACTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
ENST00000533890.1
CDS CAA 72 bp ATCTTTCCAGTCCATAACACTGAACACATCAAACTCTaGACCACTTGTGCTAGAGGCAGATTCAGTCATGAT +
Preference number: 6 (lower is better)
Translates to: IFPVHNTEHIKL*TTCARGRFSHD
Trigger: ATCATGACTGAATCTGCCTCTAGCACAAGTGGTCAAGAGTTTGATGTGTTCAGTGTTATGGACTGGAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000526087.5
ENST00000528385.5
ENST00000533560.5
CDS CAA 90 bp TGTGATGTTCTCATTTCACTTTCTGTTCTCTCTTCAAAGTCTTCTTaGACATCATCAGCATGCTGGTCTCTGATTTCAGGGGAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: CDVLISLSVLSSKSS*TSSACWSLISGEEE
Trigger: CTCTTCTTCCCCTGAAATCAGAGACCAGCATGCTGATGATGTCAAAGAAGACTTTGAAGAGAGAACAGAAAGTGAAATGAGAACATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
CDS TCA 72 bp GCTCAGGATCCACGCCTTCTAATTTCATGCCAACTTTaGATCCATTTTTGTTATATGGAAAGGATTGATGCT +
Preference number: 6 (lower is better)
Translates to: AQDPRLLISCQL*IHFCYMERIDA
Trigger: AGCATCAATCCTTTCCATATAACAAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCGTGGATCCTGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000531313.1
ENST00000533560.5
CDS CAA 72 bp TTCACTTTGAAAGCTCTTGCAGGAGCAGGTAAAGAATaGGTTTCTTCTAAGTATTTATCCCAAGAAAAATGT +
Preference number: 6 (lower is better)
Translates to: FTLKALAGAGKE*VSSKYLSQEKC
Trigger: ACATTTTTCTTGGGATAAATACTTAGAAGAAACCAATTCTTTACCTGCTCCTGCAAGAGCTTTCAAAGTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361794.7
ENST00000368136.3
ENST00000368139.6
ENST00000526019.5
ENST00000533560.5
ENST00000533890.1