RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for L3MBTL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100395

Ensembl transcript IDs: ENST00000216237.10, ENST00000449635.5, ENST00000450939.1, ENST00000452106.5, ENST00000453659.1, ENST00000466589.5, ENST00000479978.5, ENST00000481902.5, ENST00000489136.5

Found 439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGGAGCCGTAGGCGACCCCCGATTACTGTGTCCACCACAGCCATaGGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCA +
Preference number: 1 (lower is better)
Translates to: RGAVGDPRLLCPPQP*ECVTPGTCPPLPAA
Trigger: TGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCATGGCTGTGGTGGACACAGTAATCGGGGGTCGCCTACGGCTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR CCA 90 bp AAAGTCAGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTaGCTTCCAGCTAGAAGCCAGGCTGGAGGCAGGAAGGCTCAGTCG +
Preference number: 1 (lower is better)
Translates to: KVRWRHGGGGRETLG*LPARSQAGGRKAQS
Trigger: CGACTGAGCCTTCCTGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCTGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR CCA 90 bp AAGCCAAAGTCAGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTaGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCAGGAAGGCTC +
Preference number: 1 (lower is better)
Translates to: KPKSGGGMVVVVEKR*AGFQLEARLEAGRL
Trigger: GAGCCTTCCTGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCTGACTTTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR GCA 90 bp GCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACTaGTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCCCTGGG +
Preference number: 1 (lower is better)
Translates to: AQGHHTGRQNPHPGH*FLAAETSWVPNIPG
Trigger: CCCAGGGATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR GCA 90 bp GGCAGCTCTGGACTTGAAGCCTTGTCGGGCGAGGCCACGTCTAGATaGTCTTCCTTCACACGCACAGCAATGATCTCGCCAGGAACAGGC +
Preference number: 1 (lower is better)
Translates to: GSSGLEALSGEATSR*SSFTRTAMISPGTG
Trigger: GCCTGTTCCTGGCGAGATCATTGCTGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTCGCCCGACAAGGCTTCAAGTCCAGAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR GCA 90 bp GCTAGAAGCCAGGCTGGAGGCAGGAAGGCTCAGTCGTCTGTTTCCTaGTTGATGTTCTCGACGGAGACAGGCAGCTCTGGACTTGAAGCC +
Preference number: 1 (lower is better)
Translates to: ARSQAGGRKAQSSVS*LMFSTETGSSGLEA
Trigger: GGCTTCAAGTCCAGAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTCCTGCCTCCAGCCTGGCTTCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR TCA 90 bp GAAGCCAGGCTGGAGGCAGGAAGGCTCAGTCGTCTGTTTCCTGCTTaGTGTTCTCGACGGAGACAGGCAGCTCTGGACTTGAAGCCTTGT +
Preference number: 1 (lower is better)
Translates to: EARLEAGRLSRLFPA*CSRRRQAALDLKPC
Trigger: ACAAGGCTTCAAGTCCAGAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTCCTGCCTCCAGCCTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR CCA 90 bp GGGGAGGCCATCTTAAGGAAGAGCAGGCAGCTAGCGTTCCAGCTTTaGGAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGG +
Preference number: 1 (lower is better)
Translates to: GEAILRKSRQLAFQL*ELWLEKVVHRRVLG
Trigger: CCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTCCCAAAGCTGGAACGCTAGCTGCCTGCTCTTCCTTAAGATGGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR GCA 90 bp GTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTaGCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGAAA +
Preference number: 1 (lower is better)
Translates to: VRDTWDLSTTSSRMP*LKGYFMLSTILMWK
Trigger: TTTCCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR CCA 90 bp ATCTTAAGGAAGAGCAGGCAGCTAGCGTTCCAGCTTTGGGAACTCTaGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCG +
Preference number: 1 (lower is better)
Translates to: ILRKSRQLAFQLWEL*LEKVVHRRVLGPQA
Trigger: CGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTCCCAAAGCTGGAACGCTAGCTGCCTGCTCTTCCTTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR TCA 90 bp AGGAGCAGAGGACCAACACATGAGGCTGAGAGGCATTCTGCTTGGTaGATTTTTGAGGCAGAGGCTGCCCCCACCACACAACTCACTGTC +
Preference number: 1 (lower is better)
Translates to: RSRGPTHEAERHSAW*IFEAEAAPTTQLTV
Trigger: GACAGTGAGTTGTGTGGTGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAGAATGCCTCTCAGCCTCATGTGTTGGTCCTCTGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CCA 90 bp GGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAGTCAGGTaGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCA +
Preference number: 1 (lower is better)
Translates to: GRIYTERISLQAKVR*RHGGGGRETLGWLP
Trigger: TGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCTGACTTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CCA 90 bp CATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATaGGAGTCAGTCCTCACAAACACAGAAAGCAGCTCAAGGCCACCA +
Preference number: 1 (lower is better)
Translates to: HLPPNVLPGGISFRK*ESVLTNTESSSRPP
Trigger: TGGTGGCCTTGAGCTGCTTTCTGTGTTTGTGAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR TCA 90 bp TTTAGCGGGGCTTCAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCCCCATCCCTGGCAACTaGGGGCCGTGGCGGGTCGGG +
Preference number: 2 (lower is better)
Translates to: FSGASGAGSRAKVHTQAIPIPGN*GPWRVG
Trigger: CCCGACCCGCCACGGCCCTCAGTTGCCAGGGATGGG...GATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp TGCGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCCCACGGGAAGCGTCCTaGAGCCCACCAGCCGTTTCA +
Preference number: 2 (lower is better)
Translates to: CECVTPGTCPPLPAACPAPREAS*SPPAVS
Trigger: TGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGG...GGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR-3UTR TCA 90 bp CAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCCATCCCTGGCAACTaGGGGCCGTGGCGGGTCGGG +
Preference number: 2 (lower is better)
Translates to: QEQVAEPKCTLRPSSSQCPIPGN*GPWRVG
Trigger: CCCGACCCGCCACGGCCCTCAGTTGCCAGGGATGGG...ACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp AGTCTGGGGAGCCCAGTGAGGTTGCAATGGCAGCTAGATGTGTCCTCCAGCTCTTGGTGGCCCCATCCCTaGCAACTGAGGGCCGTGGCG +
Preference number: 2 (lower is better)
Translates to: SLGSPVRLQWQLDVSSSSWWPHP*QLRAVA
Trigger: CGCCACGGCCCTCAGTTGCCAGGGATGGGGCCACCA...AGAGCTGGAGGACACATCTAGCTGCCATTGCAACCTCACTGGGCTCCCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR TCA 90 bp CGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCTGCTTGGTGAATTTTTaGGGCAGAGGCTGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: RVLGPQAARHIDLSTGEGCLVNF*GRGCPH
Trigger: GTGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCA...GCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR TCA 90 bp TGTCACCATCCTCGTAGAGGAGCCGTAGGCGACCCCCGATTACTGTGTCCACCACCACCAGCCGTTTCATaGGGTAGCCCTTCCAGTCGG +
Preference number: 2 (lower is better)
Translates to: CHHPRRGAVGDPRLLCPPPPAVS*GSPSSR
Trigger: CCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGG...TGGTGGACACAGTAATCGGGGGTCGCCTACGGCTCCTCTACGAGGATGGTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR-3UTR TCA 90 bp AATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACAGGCAGCTCTGGACTTaGAGCCTTGTCGGGCGAGGC +
Preference number: 2 (lower is better)
Translates to: NPHPGHCFLAAETSWVPNRQLWT*SLVGRG
Trigger: GCCTCGCCCGACAAGGCTTCAAGTCCAGAGCTGCCT...GTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR-3UTR CCA 90 bp GTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCAAGAGAAACGCTGGGCTaGCTTCCAGCTAGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: VVVEKRWAGFQLEARLEARETLG*LPARSQ
Trigger: CTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCT...TGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp ACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAAACGCTGGGCTaGCTTCCAGCTAGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: TPAGPPPSSLHSTGQNLHRETLG*LPARSQ
Trigger: CTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCT...GTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR TCA 90 bp ACCATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGCCGTTTCAGCCCTTCCAGTCGGTaGACTTGGCATGGATGGTCC +
Preference number: 2 (lower is better)
Translates to: TILMWKSTGSVLEPTSRFSPSSR*TWHGWS
Trigger: GGACCATCCATGCCAAGTTCACCGACTGGAAGGGCT...GAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR-3UTR CCA 90 bp GAAGGCTCAGTCGTCTGTTTCCTGCTTGATGTTCTCGACGGAGACAGGCAGCTCTGGCCTTCAGCGGTGTaGCCGGTTCTGGGCAATGAG +
Preference number: 2 (lower is better)
Translates to: EGSVVCFLLDVLDGDRQLWPSAV*PVLGNE
Trigger: CTCATTGCCCAGAACCGGCCACACCGCTGAAGGCCA...GAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR CAA 90 bp GGGGGAGGCCATCTTAAGGAAGAGCAGGCAGCTAGCGTTCCAGCTTaGGGAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GGGHLKEEQAASVPA*GTLAGKGGSQTSSG
Trigger: CCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTCCCAAAGCTGGAACGCTAGCTGCCTGCTCTTCCTTAAGATGGCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CAA 90 bp TGCTTGATGTTCTCGACGGAGACAGGCAGCTCTGGACTTGAAGCCTaGTCGGGCGAGGCCACGTCTAGATGCTCTTCCTTCACACGCACA +
Preference number: 2 (lower is better)
Translates to: CLMFSTETGSSGLEA*SGEATSRCSSFTRT
Trigger: TGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTCGCCCGACAAGGCTTCAAGTCCAGAGCTGCCTGTCTCCGTCGAGAACATCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR CAA 90 bp AGAAGCCAGGCTGGAGGCAGGAAGGCTCAGTCGTCTGTTTCCTGCTaGATGTTCTCGACGGAGACAGGCAGCTCTGGACTTGAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: RSQAGGRKAQSSVSC*MFSTETGSSGLEAL
Trigger: CAAGGCTTCAAGTCCAGAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTCCTGCCTCCAGCCTGGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR-3UTR TCA 90 bp GCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCTTGTATTCCACAGTGTaGCAGTGGTGGCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: AGSRAKVHTQAIFLPMSSLYSTV*QWWPHP
Trigger: GGGATGGGGCCACCACTGTCACACTGTGGAATACAA...GGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR GCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCGAGGCCACGTCTAGATaGTCTTCCTTCACACGCACA +
Preference number: 2 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFEATSR*SSFTRT
Trigger: TGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTC...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR-3UTR GCA 90 bp AGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGCAGTCGTCTGTTTCCTaGTTGATGTTCTCGACGGAG +
Preference number: 2 (lower is better)
Translates to: RRVLGPQAARHIDLSTGEQSSVS*LMFSTE
Trigger: CTCCGTCGAGAACATCAAGCAGGAAACAGACGACTG...CTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR-3UTR CCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAAGCCAAAGTCAGGTaGAGGCATGGTGGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDQAKVR*RHGGGG
Trigger: ACCACCACCACCATGCCTCCACCTGACTTTGGCTTG...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CAA 90 bp AGGTCGGCAGTTCCCCTGCTTCCCGATCCTCATTTTCTGCTTCACTaGACTCCTCCAGATAGGAGCTGCTCTCACTGCCCACACTGCTGT +
Preference number: 2 (lower is better)
Translates to: RSAVPLLPDPHFLLH*TPPDRSCSHCPHCC
Trigger: ACAGCAGTGTGGGCAGTGAGAGCAGCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAATGAGGATCGGGAAGCAGGGGAACTGCCGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453659.1
3UTR-3UTR TCA 90 bp CAGAAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACTTGTATTCCACAGTGTaGCAGTGGTGGCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: QKAAQGHHTGRQNPHPGHLYSTV*QWWPHP
Trigger: GGGATGGGGCCACCACTGTCACACTGTGGAATACAA...GTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR GCA 90 bp GCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCAGGGGACCTTATCCTaGTCAGAGAGCTGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: AGSRAKVHTQAIFLPMSSQGTLS*SESCSR
Trigger: TCTAGAGCAGCTCTCTGAGCAGGATAAGGTCCCCTG...GGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp AGCTTTGGGAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCCAAGCCAAAGTCAGGTaGAGGCATGGTGGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: SFGNSGWKRWFTDEFWGLQAKVR*RHGGGG
Trigger: ACCACCACCACCATGCCTCCACCTGACTTTGGCTTG...GAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTCCCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCTCTGGCTGGAAAAGGTaGTTCACAGACGAGTTCTGG +
Preference number: 2 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFSGWKR*FTDEFW
Trigger: CCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGA...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp AGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGACTAGCGTTCCAGCTTTaGGAACTCTGGCTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: RWRHGGGGRETLGWLPARLAFQL*ELWLEK
Trigger: CTTTTCCAGCCAGAGTTCCCAAAGCTGGAACGCTAG...TCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp CCTTATCCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGTGGTGGCCCCATCCCTaGCAACTGAGGGCCGTGGCG +
Preference number: 2 (lower is better)
Translates to: PYPAQRAALELNLHGSFRWWPHP*QLRAVA
Trigger: CGCCACGGCCCTCAGTTGCCAGGGATGGGGCCACCA...CCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGGATAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp CCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACATTCACAGACGAGTTCTaGGGCCTCAGGCGGCCCGTC +
Preference number: 2 (lower is better)
Translates to: PAQRAALELNLHGSFRQTFTDEF*GLRRPV
Trigger: GACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGAA...TGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp GTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTATCTGGCTGGAAAAGGTaGTTCACAGACGAGTTCTGG +
Preference number: 2 (lower is better)
Translates to: VHTQAIFLPMSSPGAFPLSGWKR*FTDEFW
Trigger: CCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGA...TAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR TCA 90 bp ATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGCTGTCATCCTTGTCTTaGGGGTTCTGTGTTCACGGC +
Preference number: 2 (lower is better)
Translates to: IFLPMSSPGAFPLGNGSQLSSLS*GFCVHG
Trigger: GCCGTGAACACAGAACCCTCAAGACAAGGATGACAG...CTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR GCA 90 bp ATGAGGCTGAGAGGCATTCTGCTTGGTGAATTTTTGAGGCAGAGGCTGCCCCCACAGGGGACCTTATCCTaGTCAGAGAGCTGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: MRLRGILLGEFLRQRLPPQGTLS*SESCSR
Trigger: TCTAGAGCAGCTCTCTGAGCAGGATAAGGTCCCCTG...TGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAGAATGCCTCTCAGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR GCA 90 bp CACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGGTAGCAGAGCCAAAGTaGACACTCAGGCCATCTTCC +
Preference number: 2 (lower is better)
Translates to: HRSPKSTSWSLLLSCRDKVAEPK*TLRPSS
Trigger: GGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTAC...CTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp CAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCTAGCGTTCCAGCTTTaGGAACTCTGGCTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: QEQVAEPKCTLRPSSSQCLAFQL*ELWLEK
Trigger: CTTTTCCAGCCAGAGTTCCCAAAGCTGGAACGCTAG...ACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CCA 90 bp CTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAACGGTGTGGCCGGTTCTaGGCAATGAGGAGAGGGCGG +
Preference number: 2 (lower is better)
Translates to: LEAPVRTGPFNYKGILDERCGRF*AMRRGR
Trigger: CCGCCCTCTCCTCATTGCCCAGAACCGGCCACACCG...TTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR-3UTR TCA 90 bp CATCCTTGTCTTGAGGGTTCTGTGTTCACGGCCCCTCCAGGCATGGTTTCTTCAAGGCATTCTGCTTGGTaGATTTTTGAGGCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: HPCLEGSVFTAPPGMVSSRHSAW*IFEAEA
Trigger: AGCCTCTGCCTCAAAAATTCACCAAGCAGAATGCCT...TGAAGAAACCATGCCTGGAGGGGCCGTGAACACAGAACCCTCAAGACAAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR GCA 90 bp AAGGCCAAAAGAACATACAAGCCCAGCTCTCTAGAGGCTCCAGTCAGAACTGGACCACATCCTGGTCACTaGTTCTTAGCTGCCGAGACA +
Preference number: 2 (lower is better)
Translates to: KAKRTYKPSSLEAPVRTGPHPGH*FLAAET
Trigger: TGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG...TCCAGTTCTGACTGGAGCCTCTAGAGAGCTGGGCTTGTATGTTCTTTTGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR TCA 90 bp AGTCTGGGGAGCCCAGTGAGGTTGCAATGGCAGCTAGATGTGTCCTCCAGCTCTCAAAGGAATCTTGGATaGATTATTTTTAGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: SLGSPVRLQWQLDVSSSSQRNLG*IIFSGA
Trigger: AGCCCCGCTAAAAATAATTCATCCAAGATTCCTTTG...AGAGCTGGAGGACACATCTAGCTGCCATTGCAACCTCACTGGGCTCCCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR TCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTCGTCTGTTTCCTGCTTaGTGTTCTCGACGGAGACAG +
Preference number: 2 (lower is better)
Translates to: LQSELDPLTTKESWMNYFRLFPA*CSRRRQ
Trigger: CTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACG...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR TCA 72 bp CCAGGAACAGGCTCCGACGAGATCTTCCTGGCACCCTaGGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCC +
Preference number: 3 (lower is better)
Translates to: PGTGSDEIFLAP*GSSSSRGFLDP
Trigger: GGGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTTCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR CCA 72 bp TGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTaGCTTCCAGCTAGAAGCCAGGCTGGAGGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: WRHGGGGRETLG*LPARSQAGGRK
Trigger: CTTCCTGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR TCA 72 bp CCCGATTACTGTGTCCACCACAGCCATGCGAGTGCGTaGCACCTGGGACTTGTCCACCACTTCCAGCCGCAT +
Preference number: 3 (lower is better)
Translates to: PDYCVHHSHASA*HLGLVHHFQPH
Trigger: ATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCATGGCTGTGGTGGACACAGTAATCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR GCA 72 bp GTAGGCGACCCCCGATTACTGTGTCCACCACAGCCATaGGAGTGCGTGACACCTGGGACTTGTCCACCACTT +
Preference number: 3 (lower is better)
Translates to: VGDPRLLCPPQP*ECVTPGTCPPL
Trigger: AAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCATGGCTGTGGTGGACACAGTAATCGGGGGTCGCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR CCA 72 bp CTCCTCTCCATCCTCAGGGGACACTCTGAAGGCACCTaGCTCAGAACCACTGCCATCCAAGGAGCGAGGAGT +
Preference number: 3 (lower is better)
Translates to: LLSILRGHSEGT*LRTTAIQGARS
Trigger: ACTCCTCGCTCCTTGGATGGCAGTGGTTCTGAGCCAGGTGCCTTCAGAGTGTCCCCTGAGGATGGAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453659.1
3UTR-3UTR CAA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCTTCTTTGTGGCCTCTTaGGCCTTCAGCGGTGTGGCC +
Preference number: 3 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFFFVAS*AFSGVA
Trigger: GGCCACACCGCTGAAGGCCAAAGAGGCCACAAAGAA...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR GCA 72 bp CAGGCTGGAGGCAGGAAGGCTCAGTCGTCTGTTTCCTaGTTGATGTTCTCGACGGAGACAGGCAGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: QAGGRKAQSSVS*LMFSTETGSSG
Trigger: TCCAGAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTCCTGCCTCCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR-3UTR CAA 90 bp CCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCTCCTGCTTGGTGAATTTTaGAGGCAGAGGCTGCCCCCA +
Preference number: 3 (lower is better)
Translates to: PPNVLPGGISFRKWESVLLLGEF*RQRLPP
Trigger: TGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAG...GAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR TCA 72 bp CTGGAGGCAGGAAGGCTCAGTCGTCTGTTTCCTGCTTaGTGTTCTCGACGGAGACAGGCAGCTCTGGACTTG +
Preference number: 3 (lower is better)
Translates to: LEAGRLSRLFPA*CSRRRQAALDL
Trigger: CAAGTCCAGAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTCCTGCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR GCA 72 bp CACCACACAGGTCGCCAAAATCCACATCCTGGTCACTaGTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAAC +
Preference number: 3 (lower is better)
Translates to: HHTGRQNPHPGH*FLAAETSWVPN
Trigger: GTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR GCA 72 bp ACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTaGCTAAAGGGGTACTTCATGCTCTCCACCATCTTG +
Preference number: 3 (lower is better)
Translates to: TWDLSTTSSRMP*LKGYFMLSTIL
Trigger: CAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR GCA 72 bp GGACTTGAAGCCTTGTCGGGCGAGGCCACGTCTAGATaGTCTTCCTTCACACGCACAGCAATGATCTCGCCA +
Preference number: 3 (lower is better)
Translates to: GLEALSGEATSR*SSFTRTAMISP
Trigger: TGGCGAGATCATTGCTGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTCGCCCGACAAGGCTTCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR CCA 72 bp TACACAGAGAGGATCAGTCTCCAAGCCAAAGTCAGGTaGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGC +
Preference number: 3 (lower is better)
Translates to: YTERISLQAKVR*RHGGGGRETLG
Trigger: GCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCTGACTTTGGCTTGGAGACTGATCCTCTCTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CAA 90 bp CGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGAAATTCCAGTCGGTGAACTaGGCATGGATGGTCCGTGGG +
Preference number: 3 (lower is better)
Translates to: RMPCLKGYFMLSTILMWKFQSVN*AWMVRG
Trigger: CCCACGGACCATCCATGCCAAGTTCACCGACTGGAA...TTTCCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
3UTR-3UTR CAA 90 bp GCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCTCGTCTGTTTCCTGCTaGATGTTCTCGACGGAGACA +
Preference number: 3 (lower is better)
Translates to: AGSRAKVHTQAIFLPMSSSSVSC*MFSTET
Trigger: TGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGA...GGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
3UTR CCA 72 bp CCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATaGGAGTCAGTCCTCACAAACACAGAAAGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: PNVLPGGISFRK*ESVLTNTESSS
Trigger: TGAGCTGCTTTCTGTGTTTGTGAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR-3UTR CAA 90 bp GTTCCCCTGCTTCCCGATCCTCATTTTCTGCTTCACTTGACTCCTCCAGATAGGCTTCCTCTTCCTCCATaGGTTCTGAAGATGGGGTCT +
Preference number: 3 (lower is better)
Translates to: VPLLPDPHFLLHLTPPDRLPLPP*VLKMGS
Trigger: AGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAG...CCTATCTGGAGGAGTCAAGTGAAGCAGAAAATGAGGATCGGGAAGCAGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453659.1
3UTR-3UTR CAA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGCTGCTTGGTGAATTTTaGAGGCAGAGGCTGCCCCCA +
Preference number: 3 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILLLGEF*RQRLPP
Trigger: TGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAG...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCACCGTGGCCACACAGATaGGCCGGGGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: VVVEKRWAGFQLEARLEAPWPHR*AGAPSG
Trigger: ACCTGATGGAGCCCCGGCTCATCTGTGTGGCCACGG...TGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCACCCATCCCTGGCAACTaGGGGCCGTGGCGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PSSLHSTGQNLHREDQSPPIPGN*GPWRVG
Trigger: CCCGACCCGCCACGGCCCTCAGTTGCCAGGGATGGG...TGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCCTCCACGGGAAGCGTCCTaGAGCCCACCAGCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: RSSWHPEGRPPAGASWTPPREAS*SPPAVS
Trigger: TGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGG...AGGGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp TGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCTGGTGGCCCCATCCCTaGCAACTGAGGGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: WRHGGGGRETLGWLPARSWWPHP*QLRAVA
Trigger: CGCCACGGCCCTCAGTTGCCAGGGATGGGGCCACCA...GCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCCTAGCCATGCGAGTGCGTaGCACCTGGGACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RSSWHPEGRPPAGASWTPSHASA*HLGLVH
Trigger: GTGGACAAGTCCCAGGTGTCACGCACTCGCATGGCT...AGGGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR TCA 90 bp GCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCAGAAGCAACAGGCGGGTCGCCTCTCTGACATCTTaGTGCCGTGGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: AARHIDLSTGEGRSNRRVASLTS*CRGPHV
Trigger: GACGTGTGGGCCACGGCATCAAGATGTCAGAGAGGC...GACCCGCCTGTTGCTTCTGCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCCGTCAAAGTGGATGCTaGGGAGCCGATGCACCACTC +
Preference number: 4 (lower is better)
Translates to: RVLGPQAARHIDLSTGEGRQSGC*GADAPL
Trigger: GAGTGGTGCATCGGCTCCTCAGCATCCACTTTGACG...GCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGG +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDGAGSR*AHTSRR
Trigger: CCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCC...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCCACCAGCCAATGGGGTaGACATCCACTGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVLGPQAARHIDLSTGEGHQPMG*TSTVPR
Trigger: CCTGGGAACAGTGGATGTCCACCCCATTGGCTGGTG...GCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCGAGTGCGTGACACCTaGGACTTGTCCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: NRLRRDLPGTLRVVLQQGRVRDT*DLSTTS
Trigger: GGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCG...CCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp CGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCTCTTCTGACAGAAGGTaGCCGGGAAGATGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: RDLPGTLRVVLQQGLLGPSSDRR*PGRWRG
Trigger: CCCACGCCATCTTCCCGGCCACCTTCTGTCAGAAGA...GGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp CCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGACGGTGTGGCCGGTTCTaGGCAATGAGGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: PAGPPPSSLHSTGQNLHRRCGRF*AMRRGR
Trigger: CCGCCCTCTCCTCATTGCCCAGAACCGGCCACACCG...TCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR TCA 90 bp AGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCCTAGCCCTTCCAGTCGGTaGACTTGGCATGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: RSSWHPEGRPPAGASWTPSPSSR*TWHGWS
Trigger: GGACCATCCATGCCAAGTTCACCGACTGGAAGGGCT...AGGGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR TCA 90 bp CCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGTGGCCCACACGTCGTaGCCAACCCACTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PAGPPPSSLHSTGQNLHRVAHTS*PTHWVD
Trigger: ATCCACCCAGTGGGTTGGTCACGACGTGTGGGCCAC...TCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCTCCCGTGGCCACACAGATaGGCCGGGGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: PPNVLPGGISFRKWESVLPWPHR*AGAPSG
Trigger: ACCTGATGGAGCCCCGGCTCATCTGTGTGGCCACGG...GAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GAAGGCTCAGTCGTCTGTTTCCTGCTTGATGTTCTCGACGGAGACAGGCAGCTCGCCGGTTCTGGGCAATaGGGAGAGGGCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EGSVVCFLLDVLDGDRQLAGSGQ*GEGGAG
Trigger: TCCAGCCCCGCCCTCTCCTCATTGCCCAGAACCGGC...GAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR GCA 90 bp GCCATGCGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGGAGCAGGAGACGCTaGAGAACCTCTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: AMRVRDTWDLSTTSSRMPWSRRR*RTSWSW
Trigger: CCAAGACCAAGAGGTTCTGCAGCGTCTCCTGCTCCA...GGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp CGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCTCACTGCTTCTTAGCTaGCGAGACAAGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RDLPGTLRVVLQQGLLGPSLLLS*RDKLGP
Trigger: GGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGA...GGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp AACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGTGGCACACCAGCCAATaGGGTGGACATCCACTGTTC +
Preference number: 4 (lower is better)
Translates to: NRLRRDLPGTLRVVLQQGWHTSQ*GGHPLF
Trigger: GAACAGTGGATGTCCACCCCATTGGCTGGTGTGCCA...CCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp GTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCAGACCAACCCACTGGGTaGATCAGGGGGCTCCACATG +
Preference number: 4 (lower is better)
Translates to: VVVEKRWAGFQLEARLEADQPTG*IRGLHM
Trigger: CATGTGGAGCCCCCTGATCCACCCAGTGGGTTGGTC...TGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TTGTGGCCTCTTTGGCCTTCAGCGGTGTGGCCGGTTCTGGGCAATGAGGAGAGGGACCAACCCACTGGGTaGATCAGGGGGCTCCACATG +
Preference number: 4 (lower is better)
Translates to: LWPLWPSAVWPVLGNEERDQPTG*IRGLHM
Trigger: CATGTGGAGCCCCCTGATCCACCCAGTGGGTTGGTC...CCTCTCCTCATTGCCCAGAACCGGCCACACCGCTGAAGGCCAAAGAGGCCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp CGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCAGAGAAACGCTGGGCTaGCTTCCAGCTAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RVLGPQAARHIDLSTGEGRETLG*LPARSQ
Trigger: CTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCT...GCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CGTCATATAGACCTTTCCACAGGGGAGGGCAGAAGCAACAGGCGGGTCCCAGGATTCACAGACGAGTTCTaGGGCCTCAGGCGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: RHIDLSTGEGRSNRRVPGFTDEF*GLRRPV
Trigger: GACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGAA...TCCTGGGACCCGCCTGTTGCTTCTGCCCTCCCCTGTGGAAAGGTCTATATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CAA 72 bp TCCACCACAGCCATGCGAGTGCGTGACACCTGGGACTaGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: STTAMRVRDTWD*STTSSRMPCLK
Trigger: CTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCATGGCTGTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp GAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCAGCTGTCCTGTCCCTTaGGAGTGGAGGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ELWLEKVVHRRVLGPQAASCPVP*EWRKAP
Trigger: TGGAGCCTTCCTCCACTCTCAAGGGACAGGACAGCT...GGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TGTCACCATCCTCGTAGAGGAGCCGTAGGCGACCCCCGATTACTGTGTCCACCAAGCCATGCGAGTGCGTaGCACCTGGGACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CHHPRRGAVGDPRLLCPPSHASA*HLGLVH
Trigger: GTGGACAAGTCCCAGGTGTCACGCACTCGCATGGCT...TGGTGGACACAGTAATCGGGGGTCGCCTACGGCTCCTCTACGAGGATGGTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp GCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCGTGGCCCACACGTCGTaGCCAACCCACTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: AGSRAKVHTQAIFLPMSSVAHTS*PTHWVD
Trigger: ATCCACCCAGTGGGTTGGTCACGACGTGTGGGCCAC...GGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp ATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGTTCCGGAAGGTGGGGTaGTGGGCCATGTCACTTCGC +
Preference number: 4 (lower is better)
Translates to: MVVVVEKRWAGFQLEARLFRKVG*WAMSLR
Trigger: GCGAAGTGACATGGCCCATCACCCCACCTTCCGGAA...CAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGG +
Preference number: 4 (lower is better)
Translates to: HRSPKSTSWSLLLSCRDKGAGSR*AHTSRR
Trigger: CCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCC...CTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCCAGGGCTGAGCAAATaGAGCGGGGAGGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: QVAEPKCTLRPSSSQCPPPGLSK*SGEVGS
Trigger: ACTGCCGACCTCCCCGCTGCATTTGCTCAGCCCTGG...GGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCCAGGGCTGAGCAAATaGAGCGGGGAGGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDPGLSK*SGEVGS
Trigger: ACTGCCGACCTCCCCGCTGCATTTGCTCAGCCCTGG...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CAGGAACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCATGGAGCAGGAGACGCTaGAGAACCTCTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QEQAPTRSSWHPEGRPPAWSRRR*RTSWSW
Trigger: CCAAGACCAAGAGGTTCTGCAGCGTCTCCTGCTCCA...TGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR GCA 90 bp AGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCCTCCACTGTTCCCAGGTTaGACCAGAAGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSSWHPEGRPPAGASWTPPLFPG*TRSHGW
Trigger: CCAGCCATGACTTCTGGTGCAACCTGGGAACAGTGG...AGGGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR GCA 90 bp CAGGAACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCATCCAGCCGCATGCCCTaGCTAAAGGGGTACTTCATG +
Preference number: 4 (lower is better)
Translates to: QEQAPTRSSWHPEGRPPASSRMP*LKGYFM
Trigger: CATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGA...TGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR GCA 90 bp CGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCGTAGCAGAGCCAAAGTaGACACTCAGGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: RDLPGTLRVVLQQGLLGPVAEPK*TLRPSS
Trigger: GGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTAC...GGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp AACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCATCTCACAGACAGCTaGCTCAGAACCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: NRLRRDLPGTLRVVLQQGHLTDS*LRTTAI
Trigger: GATGGCAGTGGTTCTGAGCCAGCTGTCTGTGAGATG...CCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp GGAGCCGTAGGCGACCCCCGATTACTGTGTCCACCACAGCCATGCGAGTGCGTGTGGCTTTCTTGGAGTTaGAGGAGTAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAVGDPRLLCPPQPCECVWLSWS*RSSSWS
Trigger: GCTCCAGGAGCTACTCCTCCAACTCCAAGAAAGCCA...CACGCACTCGCATGGCTGTGGTGGACACAGTAATCGGGGGTCGCCTACGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp GCCATGCGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCGGAAGGCTCCAATTTTaGCAGACCAGGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: AMRVRDTWDLSTTSSRMPGRLQF*QTRQPC
Trigger: ACAAGGCTGCCTGGTCTGCCAAAATTGGAGCCTTCC...GGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGATCGCAGTCCACCCACTaGTCGTACTCGCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PAGPPPSSLHSTGQNLHRSQSTH*SYSLSQ
Trigger: CTGGGACAGCGAGTACGACCAGTGGGTGGACTGCGA...TCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCCGACGAGATCTTCCTaGCACCCTGAGGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFPTRSS*HPEGRP
Trigger: AGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGG...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCTCGCTGCCGAGACAAGCTaGGTCCCCAACATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPNVLPGGISFRKWESVLAAETS*VPNIPG
Trigger: CCCAGGGATGTTGGGGACCCAGCTTGTCTCGGCAGC...GAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CACCATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGCCGTTTCCACCAGCCGTTTCATaGGGTAGCCCTTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: HHLDVEIHGKRPGAHQPFPPAVS*GSPSSR
Trigger: CCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGG...AAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp CCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCCCACCAGCCGTTTCATaGGGTAGCCCTTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: PHPGHCFLAAETSWVPNIPPAVS*GSPSSR
Trigger: CCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGG...GATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TTTAGCGGGGCTTCAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCAGCCATGCGAGTGCGTaGCACCTGGGACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FSGASGAGSRAKVHTQAISHASA*HLGLVH
Trigger: GTGGACAAGTCCCAGGTGTCACGCACTCGCATGGCT...GATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CAGGAACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGCTTCATGCCCACCTTaGAGCCATGGTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: QEQAPTRSSWHPEGRPPAASCPP*SHGLGN
Trigger: ATTGCCCAAACCATGGCTTCAAGGTGGGCATGAAGC...TGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR GCA 90 bp AGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGCCAGGGCTGAGCAAATaGAGCGGGGAGGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRMPCLKGYFMLSTILMWPGLSK*SGEVGS
Trigger: ACTGCCGACCTCCCCGCTGCATTTGCTCAGCCCTGG...CCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp GGAGCCCACCAGCCGTTTCATGAGGTAGCCCTTCCAGTCGGTGAACTTGGCATGCTGGCTCAGAACCACTaGCATCCAAGGAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GAHQPFHEVALPVGELGMLAQNH*HPRSEE
Trigger: CTCCTCGCTCCTTGGATGGCAGTGGTTCTGAGCCAG...CATGCCAAGTTCACCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp TCACAGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGCAGCACCCGATACCCTaGTGTCTGGATGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: SQTSSGASGGPSYRPFHRQHPIP*CLDDRG
Trigger: GCCTCTGTCATCCAGACAGCAGGGTATCGGGTGCTG...CCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp TGTCACCATCCTCGTAGAGGAGCCGTAGGCGACCCCCGATTACTGTGTCCACCACCACAGCCATGCGAGTaGGTGACACCTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: CHHPRRGAVGDPRLLCPPPQPCE*VTPGTC
Trigger: ACAAGTCCCAGGTGTCACGCACTCGCATGGCTGTGG...TGGTGGACACAGTAATCGGGGGTCGCCTACGGCTCCTCTACGAGGATGGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp ATGCGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCATCTCACAGACAGCTaGCTCAGAACCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: MRVRDTWDLSTTSSRMPCHLTDS*LRTTAI
Trigger: GATGGCAGTGGTTCTGAGCCAGCTGTCTGTGAGATG...GCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCTCGGTGAACTTGGCATaGATGGTCCGTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFSVNLA*MVRGGT
Trigger: AGTGCCCCCACGGACCATCCATGCCAAGTTCACCGA...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGTCGGTGAACTTGGCATaGATGGTCCGTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: AGPPPSSLHSTGQNLHRESVNLA*MVRGGT
Trigger: AGTGCCCCCACGGACCATCCATGCCAAGTTCACCGA...CTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp ATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGCCGTTTCATGCCACGGGAAGCGTCCTaGAGCCCACCAGCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: ILMWKSTGSVLEPTSRFMPREAS*SPPAVS
Trigger: TGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGG...CATGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp GAAGCCTTGTCGGGCGAGGCCACGTCTAGATGCTCTTCCTTCACACGCACAGCAAGGGGGCTCCACATGTaGCACCAGAAGTCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: EALSGEATSRCSSFTRTARGLHM*HQKSSS
Trigger: TGACGACGACTTCTGGTGCCACATGTGGAGCCCCCT...TGCTGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTCGCCCGACAAGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCTCCCAGCCGTCAAAGTaGATGCTGAGGAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFSQPSK*MLRSRC
Trigger: GCATCGGCTCCTCAGCATCCACTTTGACGGCTGGGA...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATGACGGGGTAGATGTCTaGGGACTCGCAGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDDGVDV*GLAVHP
Trigger: TGGGTGGACTGCGAGTCCCCAGACATCTACCCCGTC...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CACACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACATGGCCTTCAGCGGTGTaGCCGGTTCTGCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HTGRQNPHPGHCFLAAETWPSAV*PVLRPQ
Trigger: CTGTGGCCGCAGAACCGGCCACACCGCTGAAGGCCA...TGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216237.10
CDS-3UTR CCA 90 bp GACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACAAGAGAAACGCTGGGCTaGCTTCCAGCTAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DPSRSSTVQPSQHRAEFTRETLG*LPARSQ
Trigger: CTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCT...TGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCCTAGCGTTCCAGCTTTaGGAACTCTGGCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RVLGPQAARHIDLSTGEGLAFQL*ELWLEK
Trigger: CTTTTCCAGCCAGAGTTCCCAAAGCTGGAACGCTAG...GCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGCTGCTCAGAGGGACCTaGGTAGTTTACCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGPPPSSLHSTGQNLHRELLRGT*VVYLRP
Trigger: TGGCCGCAGGTAAACTACCCAGGTCCCTCTGAGCAG...CTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp TTTAGCGGGGCTTCAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTGGCCTTCAGCGGTGTaGCCGGTTCTGGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: FSGASGAGSRAKVHTQAIWPSAV*PVLGNE
Trigger: CTCATTGCCCAGAACCGGCCACACCGCTGAAGGCCA...GATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR TCA 90 bp TTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCAGCCCTTCCAGTCGGTaGACTTGGCATGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: LSTTSSRMPCLKGYFMLSSPSSR*TWHGWS
Trigger: GGACCATCCATGCCAAGTTCACCGACTGGAAGGGCT...GGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp ACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCCCACCAGCCGTTTCATaGGGTAGCCCTTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: TVQPSQHRAEFTQRGSVSPPAVS*GSPSSR
Trigger: CCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGG...GGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp ATGCGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCTGCTCTCCACCATCTTaGTGTGGAAATCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: MRVRDTWDLSTTSSRMPCCSPPS*CGNPRE
Trigger: TTCCCGTGGATTTCCACATCAAGATGGTGGAGAGCA...GCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp CTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGTCACTTCGCCTCTCTaGCATCTTGATGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LEKVVHRRVLGPQAARHIVTSPL*HLDAVA
Trigger: GGCCACGGCATCAAGATGTCAGAGAGGCGAAGTGAC...TATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTTTCCGGAAGGTGGGGTaGTGGGCCATGTCACTTCGC +
Preference number: 4 (lower is better)
Translates to: QEQVAEPKCTLRPSSSQCFRKVG*WAMSLR
Trigger: GCGAAGTGACATGGCCCATCACCCCACCTTCCGGAA...ACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACAGCTTCATGCCCACCTTaGAGCCATGGTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: DPSRSSTVQPSQHRAEFTASCPP*SHGLGN
Trigger: ATTGCCCAAACCATGGCTTCAAGGTGGGCATGAAGC...TGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGATTGTATTCCACAGTGTaGCAGTGGTGGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: RWRHGGGGRETLGWLPARLYSTV*QWWPHP
Trigger: GGGATGGGGCCACCACTGTCACACTGTGGAATACAA...TCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCCTCCAGATAGGAGCTaGTCTCACTGCCCACACTGC +
Preference number: 4 (lower is better)
Translates to: LVHHFQPHALPKGVLHALPPDRS*SHCPHC
Trigger: GCAGTGTGGGCAGTGAGAGCAGCTCCTATCTGGAGG...GAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp TTTAGCGGGGCTTCAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCCTGGCTCAGAACCACTaGCATCCAAGGAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: FSGASGAGSRAKVHTQAILAQNH*HPRSEE
Trigger: CTCCTCGCTCCTTGGATGGCAGTGGTTCTGAGCCAG...GATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCTCCTGGCTCAGAACCACTaGCATCCAAGGAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPNVLPGGISFRKWESVLLAQNH*HPRSEE
Trigger: CTCCTCGCTCCTTGGATGGCAGTGGTTCTGAGCCAG...GAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTTGTTGGTGTCCCATCTaGCAGCTGTCCTGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: HLGLVHHFQPHALPKGVLCWCPI*QLSCPL
Trigger: CAAGGGACAGGACAGCTGGCAGATGGGACACCAACA...AAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp CTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATACAGCACCCGATACCCTaGTGTCTGGATGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: LEKVVHRRVLGPQAARHIQHPIP*CLDDRG
Trigger: GCCTCTGTCATCCAGACAGCAGGGTATCGGGTGCTG...TATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCCACTGTTCCCAGGTTaGACCAGAAGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: HLGLVHHFQPHALPKGVLPLFPG*TRSHGW
Trigger: CCAGCCATGACTTCTGGTGCAACCTGGGAACAGTGG...AAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp ACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCTGTCCACCACAGCCATaGGAGTGCGTGACACCTGGG +
Preference number: 4 (lower is better)
Translates to: TVQPSQHRAEFTQRGSVSCPPQP*ECVTPG
Trigger: CCCAGGTGTCACGCACTCGCATGGCTGTGGTGGACA...GGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGATGCTGAGGAGCCGATaGACCACTCGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: AGPPPSSLHSTGQNLHREMLRSR*TTRFTV
Trigger: CACGGTGAAACGAGTGGTGCATCGGCTCCTCAGCAT...CTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TGCGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCAGAACCTCTTGGTCTTaGAGAAGAAGGCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: CECVTPGTCPPLPAACPARTSWS*RRRLPL
Trigger: CAAGGGAAGCCTTCTTCTCCAAGACCAAGAGGTTCT...GGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp GCTCTCCACCATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGAGCGTCTTGTCCTGTTaGTGTCCCATCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALHHLDVEIHGKRPGAHQSVLSC*CPICQL
Trigger: CAGCTGGCAGATGGGACACCAACAGGACAAGACGCT...CTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGATGGTGGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CAGCCGTTTCATGAGGTAGCCCTTCCAGTCGGTGAACTTGGCATGGATGGTCCGCACCAGCCAATGGGGTaGACATCCACTGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPFHEVALPVGELGMDGPHQPMG*TSTVPR
Trigger: CCTGGGAACAGTGGATGTCCACCCCATTGGCTGGTG...CGGACCATCCATGCCAAGTTCACCGACTGGAAGGGCTACCTCATGAAACGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGATGGCACACCAGCCAATaGGGTGGACATCCACTGTTC +
Preference number: 4 (lower is better)
Translates to: PAGPPPSSLHSTGQNLHRWHTSQ*GGHPLF
Trigger: GAACAGTGGATGTCCACCCCATTGGCTGGTGTGCCA...TCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GCTCTCCACCATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGTGGCACACCAGCCAATaGGGTGGACATCCACTGTTC +
Preference number: 4 (lower is better)
Translates to: ALHHLDVEIHGKRPGAHQWHTSQ*GGHPLF
Trigger: GAACAGTGGATGTCCACCCCATTGGCTGGTGTGCCA...CTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGATGGTGGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCTCGGTGAACTTGGCATaGATGGTCCGTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LVHHFQPHALPKGVLHALSVNLA*MVRGGT
Trigger: AGTGCCCCCACGGACCATCCATGCCAAGTTCACCGA...GAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp GGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCGAGTGCGTGACACCTaGGACTTGTCCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: GLVHHFQPHALPKGVLHARVRDT*DLSTTS
Trigger: GGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCG...AGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAAGATCTTCCGGAAGGTaGGGTGATGGGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: PAGPPPSSLHSTGQNLHRRSSGR*GDGPCH
Trigger: GTGACATGGCCCATCACCCCACCTTCCGGAAGATCT...TCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGAGATCTTCCGGAAGGTaGGGTGATGGGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: AGPPPSSLHSTGQNLHRERSSGR*GDGPCH
Trigger: GTGACATGGCCCATCACCCCACCTTCCGGAAGATCT...CTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CGAGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCGAGCGGCTTTCGACTTaGTCTTCTCCAAGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RDLPGTLRVVLQQGLLGPERLST*SSPSSS
Trigger: AGAACTACTTGGAGAAGACCAAGTCGAAAGCCGCTC...GGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR TCA 90 bp GCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCAGAAGCAACAGGCGGGTCTTCCTCCATTGGTTCTaGAGATGGGGTCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: AARHIDLSTGEGRSNRRVFLHWF*RWGLLN
Trigger: ATTGAGGAGACCCCATCTTCAGAACCAATGGAGGAA...GACCCGCCTGTTGCTTCTGCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGAGCTGTCCTGTCCCTTaGGAGTGGAGGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRMPCLKGYFMLSTILMWSCPVP*EWRKAP
Trigger: TGGAGCCTTCCTCCACTCTCAAGGGACAGGACAGCT...CCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp CCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCACCCTGCTGTCTGGATaGCAGAGGCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: PHPGHCFLAAETSWVPNITLLSG*QRRSST
Trigger: TGTACTGGATCGCCTCTGTCATCCAGACAGCAGGGT...GATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGACTAGGATCTTGCTGTTaGTGGCACACCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: RWRHGGGGRETLGWLPARLGSCC*WHTSQW
Trigger: CCATTGGCTGGTGTGCCATCAACAGCAAGATCCTAG...TCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GCTCTCCACCATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGCTAGGATCTTGCTGTTaGTGGCACACCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: ALHHLDVEIHGKRPGAHQLGSCC*WHTSQW
Trigger: CCATTGGCTGGTGTGCCATCAACAGCAAGATCCTAG...CTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGATGGTGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp AAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACTGCAGCCCTTCCAGTCGGTaGACTTGGCATGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: KAAQGHHTGRQNPHPGHCSPSSR*TWHGWS
Trigger: GGACCATCCATGCCAAGTTCACCGACTGGAAGGGCT...GCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp ATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGGCCTCTCTGACATCTTaGTGCCGTGGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: IFLPMSSPGAFPLGNGSQASLTS*CRGPHV
Trigger: GACGTGTGGGCCACGGCATCAAGATGTCAGAGAGGC...CTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp ATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGCGTCTGTTTCCTGCTTaGTGTTCTCGACGGAGACAG +
Preference number: 4 (lower is better)
Translates to: MVVVVEKRWAGFQLEARLRLFPA*CSRRRQ
Trigger: CTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACG...CAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAACCCATCCCTGGCAACTaGGGGCCGTGGCGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: LEAPVRTGPFNYKGILDEPIPGN*GPWRVG
Trigger: CCCGACCCGCCACGGCCCTCAGTTGCCAGGGATGGG...TTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATTGCTTGGTGAATTTTTaGGGCAGAGGCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDCLVNF*GRGCPH
Trigger: GTGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCA...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCCCAAGCGTCACCAGGTaGAGGAAGCCATATTGGCCT +
Preference number: 4 (lower is better)
Translates to: PHPGHCFLAAETSWVPNIPSVTR*RKPYWP
Trigger: AGGCCAATATGGCTTCCTGCACCTGGTGACGCTTGG...GATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216237.10
CDS-3UTR GCA 90 bp CCTGGAGCCCACCAGCCGTTTCATGAGGTAGCCCTTCCAGTCGGTGAACTTGGCAGGAGCTGCTCTCACTaGCCACACTGCTGTTATAAC +
Preference number: 4 (lower is better)
Translates to: PGAHQPFHEVALPVGELGRSCSH*PHCCYN
Trigger: GTTATAACAGCAGTGTGGGCAGTGAGAGCAGCTCCT...GCCAAGTTCACCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGGGCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp AAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACTGCCCTCCAGATAGGAGCTaGTCTCACTGCCCACACTGC +
Preference number: 4 (lower is better)
Translates to: KAAQGHHTGRQNPHPGHCPPDRS*SHCPHC
Trigger: GCAGTGTGGGCAGTGAGAGCAGCTCCTATCTGGAGG...GCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GAGGTCGGCAGTTCCCCTGCTTCCCGATCCTCATTTTCTGCTTCACTTGACTCCCCTCCAGATAGGAGCTaGTCTCACTGCCCACACTGC +
Preference number: 4 (lower is better)
Translates to: EVGSSPASRSSFSASLDSPPDRS*SHCPHC
Trigger: GCAGTGTGGGCAGTGAGAGCAGCTCCTATCTGGAGG...GGAGTCAAGTGAAGCAGAAAATGAGGATCGGGAAGCAGGGGAACTGCCGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp CCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCGGTCGGCAGTTCCCCTaGTTCCCGATCCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: PHPGHCFLAAETSWVPNIGRQFP*FPILIF
Trigger: GAAAATGAGGATCGGGAAGCAGGGGAACTGCCGACC...GATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTGGTCGGCAGTTCCCCTaGTTCCCGATCCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GLVHHFQPHALPKGVLHAGRQFP*FPILIF
Trigger: GAAAATGAGGATCGGGAAGCAGGGGAACTGCCGACC...AGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp GAGGTCGGCAGTTCCCCTGCTTCCCGATCCTCATTTTCTGCTTCACTTGACTCCCTGGCTCAGAACCACTaGCATCCAAGGAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: EVGSSPASRSSFSASLDSLAQNH*HPRSEE
Trigger: CTCCTCGCTCCTTGGATGGCAGTGGTTCTGAGCCAG...GGAGTCAAGTGAAGCAGAAAATGAGGATCGGGAAGCAGGGGAACTGCCGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp AGTCTGGGGAGCCCAGTGAGGTTGCAATGGCAGCTAGATGTGTCCTCCAGCTCTTGTTGGTGTCCCATCTaGCAGCTGTCCTGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SLGSPVRLQWQLDVSSSSCWCPI*QLSCPL
Trigger: CAAGGGACAGGACAGCTGGCAGATGGGACACCAACA...AGAGCTGGAGGACACATCTAGCTGCCATTGCAACCTCACTGGGCTCCCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATTCCAGCCGCATGCCCTaGCTAAAGGGGTACTTCATG +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDSSRMP*LKGYFM
Trigger: CATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGA...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GCCCACCAGCCGTTTCATGAGGTAGCCCTTCCAGTCGGTGAACTTGGCATGGATTCCAGCCGCATGCCCTaGCTAAAGGGGTACTTCATG +
Preference number: 4 (lower is better)
Translates to: AHQPFHEVALPVGELGMDSSRMP*LKGYFM
Trigger: CATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGA...ATCCATGCCAAGTTCACCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp CCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGAATGTCCACCACAGCCATaGGAGTGCGTGACACCTGGG +
Preference number: 4 (lower is better)
Translates to: PHALPKGVLHALHHLDVECPPQP*ECVTPG
Trigger: CCCAGGTGTCACGCACTCGCATGGCTGTGGTGGACA...TTCCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp AATGATCTCGCCAGGAACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCTTGCCACGCAGATGTTaGCCAGATTCAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: NDLARNRLRRDLPGTLRVLPRRC*PDSGGQ
Trigger: TTGACCCCCTGAATCTGGGCAACATCTGCGTGGCAA...GACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTTCCTGGCGAGATCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR GCA 90 bp ATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCCACGTCTAGATaGTCTTCCTTCACACGCACA +
Preference number: 4 (lower is better)
Translates to: MVVVVEKRWAGFQLEARLEATSR*SSFTRT
Trigger: TGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTC...CAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCTCACTGCTTCTTAGCTaGCGAGACAAGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QVAEPKCTLRPSSSQCPPSLLLS*RDKLGP
Trigger: GGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGA...GGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCCACATCCTGGTCACTaGTTCTTAGCTGCCGAGACA +
Preference number: 4 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFPHPGH*FLAAET
Trigger: TGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp ACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCTGGAGGAGTAGCTCCTaGAGCAGGAGACGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TVQPSQHRAEFTQRGSVSWRSSS*SRRRCR
Trigger: TCTGCAGCGTCTCCTGCTCCAGGAGCTACTCCTCCA...GGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCAGCGTCTTGTCCTGTTaGTGTCCCATCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVAEPKCTLRPSSSQCPPSVLSC*CPICQL
Trigger: CAGCTGGCAGATGGGACACCAACAGGACAAGACGCT...GGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAACCACGGGAAGCGTCCTaGAGCCCACCAGCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SLHSTGQNLHREDQSPSQPREAS*SPPAVS
Trigger: TGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGG...TTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TTTAGCGGGGCTTCAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCGACATCTTGATGCCGTaGCCCACACGTCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: FSGASGAGSRAKVHTQAIDILMP*PTRRDQ
Trigger: TTGGTCACGACGTGTGGGCCACGGCATCAAGATGTC...GATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCGACATCTTGATGCCGTaGCCCACACGTCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: AGSRAKVHTQAIFLPMSSDILMP*PTRRDQ
Trigger: TTGGTCACGACGTGTGGGCCACGGCATCAAGATGTC...GGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCCTGTTAAAGAGTCTCGATaGAGCGGCTTTCGACTTGGT +
Preference number: 4 (lower is better)
Translates to: RSSWHPEGRPPAGASWTPVKESR*SGFRLG
Trigger: ACCAAGTCGAAAGCCGCTCCATCGAGACTCTTTAAC...AGGGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp ATGAGGCTGAGAGGCATTCTGCTTGGTGAATTTTTGAGGCAGAGGCTGCCCCCATCGCAGTCCACCCACTaGTCGTACTCGCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: MRLRGILLGEFLRQRLPPSQSTH*SYSLSQ
Trigger: CTGGGACAGCGAGTACGACCAGTGGGTGGACTGCGA...TGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAGAATGCCTCTCAGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp ACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACTCTGGCTGGAAAAGGTaGTTCACAGACGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPAGPPPSSLHSTGQNLHSGWKR*FTDEFW
Trigger: CCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGA...GTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACATGGTGGCCCCATCCCTaGCAACTGAGGGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PAQRAALELNLHGSFRQTWWPHP*QLRAVA
Trigger: CGCCACGGCCCTCAGTTGCCAGGGATGGGGCCACCA...TGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGACGGCCCCTCCAGGCATaGTTTCTTCATTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RWRHGGGGRETLGWLPARRPLQA*FLHLGR
Trigger: CCTACCTAAATGAAGAAACCATGCCTGGAGGGGCCG...TCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CAA 72 bp CAGCTAGATGTGTCCTCCAGCTCTGTCATCCTTGTCTaGAGGGTTCTGTGTTCACGGCCCCTCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: QLDVSSSSVILV*RVLCSRPLQAW
Trigger: CCATGCCTGGAGGGGCCGTGAACACAGAACCCTCAAGACAAGGATGACAGAGCTGGAGGACACATCTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CAA 72 bp GCTGGAGGCAGGAAGGCTCAGTCGTCTGTTTCCTGCTaGATGTTCTCGACGGAGACAGGCAGCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: AGGRKAQSSVSC*MFSTETGSSGL
Trigger: AAGTCCAGAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTCCTGCCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR TCA 90 bp AGATCTTCCTGGCACCCTGAGGGTCGTCCTCCAGCAGGGGCTTCTTGGACCCCTATTTTCTGCTTCACTTaGCTCCTCCAGATAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RSSWHPEGRPPAGASWTPIFCFT*LLQIGA
Trigger: AGCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAAT...AGGGGTCCAAGAAGCCCCTGCTGGAGGACGACCCTCAGGGTGCCAGGAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR TCA 90 bp CACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGAGCTGTCCTGTCCCTTaGGAGTGGAGGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HRSPKSTSWSLLLSCRDKSCPVP*EWRKAP
Trigger: TGGAGCCTTCCTCCACTCTCAAGGGACAGGACAGCT...CTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCACCCTGCTGTCTGGATaGCAGAGGCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: FLPMSSPGAFPLGNGSQSTLLSG*QRRSST
Trigger: TGTACTGGATCGCCTCTGTCATCCAGACAGCAGGGT...GGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCCTAGGATCTTGCTGTTaGTGGCACACCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: GAGSRAKVHTQAIFLPMSLGSCC*WHTSQW
Trigger: CCATTGGCTGGTGTGCCATCAACAGCAAGATCCTAG...GGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGTGCTCTCCACCATCTTaGTGTGGAAATCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: AGPPPSSLHSTGQNLHRECSPPS*CGNPRE
Trigger: TTCCCGTGGATTTCCACATCAAGATGGTGGAGAGCA...CTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCTCAATGTCATTCTTCTaGCAGAAGGTGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFSMSFF*QKVAGK
Trigger: CTTCCCGGCCACCTTCTGTCAGAAGAATGACATTGA...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AGCTTTGGGAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCTTGTATTCCACAGTGTaGCAGTGGTGGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: SFGNSGWKRWFTDEFWGLLYSTV*QWWPHP
Trigger: GGGATGGGGCCACCACTGTCACACTGTGGAATACAA...GAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTCCCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACTGCTTGGTGAATTTTTaGGGCAGAGGCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: NPHPGHCFLAAETSWVPNCLVNF*GRGCPH
Trigger: GTGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCA...GTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TTTAGCGGGGCTTCAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCCTGTCATCCTTGTCTTaGGGGTTCTGTGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: FSGASGAGSRAKVHTQAILSSLS*GFCVHG
Trigger: GCCGTGAACACAGAACCCTCAAGACAAGGATGACAG...GATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCTGTCATCCTTGTCTTaGGGGTTCTGTGTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDLSSLS*GFCVHG
Trigger: GCCGTGAACACAGAACCCTCAAGACAAGGATGACAG...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CCTCATTTTCTGCTTCACTTGACTCCTCCAGATAGGAGCTGCTCTCACTGCCCACCTCAGGGGACACTCTaGAGGCACCTGGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PHFLLHLTPPDRSCSHCPPQGTL*RHLAQN
Trigger: GTTCTGAGCCAGGTGCCTTCAGAGTGTCCCCTGAGG...TGGGCAGTGAGAGCAGCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp AATGATCTCGCCAGGAACAGGCTCCGACGAGATCTTCCTGGCACCCTGAGGGTCAGGAGCTGCTCTCACTaGCCACACTGCTGTTATAAC +
Preference number: 4 (lower is better)
Translates to: NDLARNRLRRDLPGTLRVRSCSH*PHCCYN
Trigger: GTTATAACAGCAGTGTGGGCAGTGAGAGCAGCTCCT...GACCCTCAGGGTGCCAGGAAGATCTCGTCGGAGCCTGTTCCTGGCGAGATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR GCA 90 bp GAGGTCGGCAGTTCCCCTGCTTCCCGATCCTCATTTTCTGCTTCACTTGACTCCGGTCGGCAGTTCCCCTaGTTCCCGATCCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: EVGSSPASRSSFSASLDSGRQFP*FPILIF
Trigger: GAAAATGAGGATCGGGAAGCAGGGGAACTGCCGACC...GGAGTCAAGTGAAGCAGAAAATGAGGATCGGGAAGCAGGGGAACTGCCGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp TCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTGTTGGTGTCCCATCTaGCAGCTGTCCTGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: STVQPSQHRAEFTQRGSVCWCPI*QLSCPL
Trigger: CAAGGGACAGGACAGCTGGCAGATGGGACACCAACA...GACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp AGCTTTGGGAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCCCACTGTTCCCAGGTTaGACCAGAAGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFGNSGWKRWFTDEFWGLPLFPG*TRSHGW
Trigger: CCAGCCATGACTTCTGGTGCAACCTGGGAACAGTGG...GAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTCCCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCAGCCTTCTGTGTAGACTaGTCGTACCTTCTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VVVEKRWAGFQLEARLEAAFCVD*SYLLEE
Trigger: CTCTTCAAGAAGGTACGAGCAGTCTACACAGAAGGC...TGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTATTGCCACGCAGATGTTaGCCAGATTCAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: VHTQAIFLPMSSPGAFPLLPRRC*PDSGGQ
Trigger: TTGACCCCCTGAATCTGGGCAACATCTGCGTGGCAA...TAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGCCCAGTGAGGTTGCAATGGCAGCTAGATGTGTCCTCCAGCTCTGAGGCCACGTCTAGATaGTCTTCCTTCACACGCACA +
Preference number: 4 (lower is better)
Translates to: SLGSPVRLQWQLDVSSSSEATSR*SSFTRT
Trigger: TGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTC...AGAGCTGGAGGACACATCTAGCTGCCATTGCAACCTCACTGGGCTCCCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCCAGGGGACCTTATCCTaGTCAGAGAGCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: PHPGHCFLAAETSWVPNIQGTLS*SESCSR
Trigger: TCTAGAGCAGCTCTCTGAGCAGGATAAGGTCCCCTG...GATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GCTCTCCACCATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGCGCTGCAGAACCTCTTaGTCTTGGAGAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALHHLDVEIHGKRPGAHQRCRTS*SWRRRL
Trigger: AAGCCTTCTTCTCCAAGACCAAGAGGTTCTGCAGCG...CTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGATGGTGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CAGAAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACAGCGTCTTGTCCTGTTaGTGTCCCATCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QKAAQGHHTGRQNPHPGHSVLSC*CPICQL
Trigger: CAGCTGGCAGATGGGACACCAACAGGACAAGACGCT...GTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCTCCACCATCTTGATGTaGAAATCCACGGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: STTSSRMPCLKGYFMLSTSTILM*KSTGSV
Trigger: GACGCTTCCCGTGGATTTCCACATCAAGATGGTGGA...GGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp CACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCGAGTGCGTGACACCTaGGACTTGTCCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: HRSPKSTSWSLLLSCRDKRVRDT*DLSTTS
Trigger: GGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCG...CTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCATGCCTCATAACCTTTTaGCGGTGTGAGCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: VVVEKRWAGFQLEARLEACLITF*RCELNV
Trigger: GACATTGAGCTCACACCGCCAAAAGGTTATGAGGCA...TGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGCCCACCTTGAAGCCATaGTTTGGGCAATCCATGTTA +
Preference number: 4 (lower is better)
Translates to: RRVLGPQAARHIDLSTGEPTLKP*FGQSML
Trigger: TAACATGGATTGCCCAAACCATGGCTTCAAGGTGGG...CTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CCTGGAGCCCACCAGCCGTTTCATGAGGTAGCCCTTCCAGTCGGTGAACTTGGCATTTTCTGCTTCACTTaGCTCCTCCAGATAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGAHQPFHEVALPVGELGIFCFT*LLQIGA
Trigger: AGCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAAT...GCCAAGTTCACCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGGGCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR TCA 90 bp CCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCTCTCAATGTCATTCTTCTaGCAGAAGGTGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PPNVLPGGISFRKWESVLSMSFF*QKVAGK
Trigger: CTTCCCGGCCACCTTCTGTCAGAAGAATGACATTGA...GAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCAAACCTTTTGGCGGTGTaGGCTCAATGTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VVVEKRWAGFQLEARLEANLLAV*AQCHSS
Trigger: AGAAGAATGACATTGAGCTCACACCGCCAAAAGGTT...TGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCGTCTGTTTCCTGCTTaGTGTTCTCGACGGAGACAG +
Preference number: 4 (lower is better)
Translates to: STSWSLLLSCRDKLGPQHRLFPA*CSRRRQ
Trigger: CTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACG...ATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp ACTCCGGAAACTATCATAGCCACCAAACAGCTCCAAGTCGTCATCTTCCTCTTCCCAGGGCTGAGCAAATaGAGCGGGGAGGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: TPETIIATKQLQVVIFLFPGLSK*SGEVGS
Trigger: ACTGCCGACCTCCCCGCTGCATTTGCTCAGCCCTGG...GAAGAGGAAGATGACGACTTGGAGCTGTTTGGTGGCTATGATAGTTTCCGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp CATCCTTGTCTTGAGGGTTCTGTGTTCACGGCCCCTCCAGGCATGGTTTCTTCATGGAGCAGGAGACGCTaGAGAACCTCTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HPCLEGSVFTAPPGMVSSWSRRR*RTSWSW
Trigger: CCAAGACCAAGAGGTTCTGCAGCGTCTCCTGCTCCA...TGAAGAAACCATGCCTGGAGGGGCCGTGAACACAGAACCCTCAAGACAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp AGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGACCAGTTGAAAGTCTGTaGCTCATAACCTTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RWRHGGGGRETLGWLPARPVESL*LITFWR
Trigger: CCGCCAAAAGGTTATGAGGCACAGACTTTCAACTGG...TCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCAGTCGTCTGTTTCCTaGTTGATGTTCTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: QVAEPKCTLRPSSSQCPPQSSVS*LMFSTE
Trigger: CTCCGTCGAGAACATCAAGCAGGAAACAGACGACTG...GGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp ACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCCATCTCACAGACAGCTaGCTCAGAACCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: TVQPSQHRAEFTQRGSVSHLTDS*LRTTAI
Trigger: GATGGCAGTGGTTCTGAGCCAGCTGTCTGTGAGATG...GGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCGCTGCAGAACCTCTTaGTCTTGGAGAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDRCRTS*SWRRRL
Trigger: AAGCCTTCTTCTCCAAGACCAAGAGGTTCTGCAGCG...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTACGCTGCAGAACCTCTTaGTCTTGGAGAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VHTQAIFLPMSSPGAFPLRCRTS*SWRRRL
Trigger: AAGCCTTCTTCTCCAAGACCAAGAGGTTCTGCAGCG...TAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGAAATCCACGGGTGGAGGAGTAGCTCCTaGAGCAGGAGACGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPKGVLHALHHLDVEIHGWRSSS*SRRRCR
Trigger: TCTGCAGCGTCTCCTGCTCCAGGAGCTACTCCTCCA...CCCGTGGATTTCCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp AAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACTGCTGGCTTTCTTGGAGTTaGAGGAGTAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KAAQGHHTGRQNPHPGHCWLSWS*RSSSWS
Trigger: GCTCCAGGAGCTACTCCTCCAACTCCAAGAAAGCCA...GCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTAGATACTGGCTTTCTTaGAGTTGGAGGAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLGLVHHFQPHALPKGVLRYWLS*SWRSSS
Trigger: GGAGCTACTCCTCCAACTCCAAGAAAGCCAGTATCT...AAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp TGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCAGATACTGGCTTTCTTaGAGTTGGAGGAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: WRHGGGGRETLGWLPARSRYWLS*SWRSSS
Trigger: GGAGCTACTCCTCCAACTCCAAGAAAGCCAGTATCT...GCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCTCTCCACCATCTTGATGTaGAAATCCACGGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: PPNVLPGGISFRKWESVLSTILM*KSTGSV
Trigger: GACGCTTCCCGTGGATTTCCACATCAAGATGGTGGA...GAGGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCGAGCGGCTTTCGACTTaGTCTTCTCCAAGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFERLST*SSPSSS
Trigger: AGAACTACTTGGAGAAGACCAAGTCGAAAGCCGCTC...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GAAGCCTTGTCGGGCGAGGCCACGTCTAGATGCTCTTCCTTCACACGCACAGCACCCACCTTGAAGCCATaGTTTGGGCAATCCATGTTA +
Preference number: 4 (lower is better)
Translates to: EALSGEATSRCSSFTRTAPTLKP*FGQSML
Trigger: TAACATGGATTGCCCAAACCATGGCTTCAAGGTGGG...TGCTGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTCGCCCGACAAGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CCA 90 bp AGCTTTGGGAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCCGGCCCCTCCAGGCATaGTTTCTTCATTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SFGNSGWKRWFTDEFWGLRPLQA*FLHLGR
Trigger: CCTACCTAAATGAAGAAACCATGCCTGGAGGGGCCG...GAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTCCCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
3UTR CAA 72 bp GTTCCCCTGCTTCCCGATCCTCATTTTCTGCTTCACTaGACTCCTCCAGATAGGAGCTGCTCTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VPLLPDPHFLLH*TPPDRSCSHCP
Trigger: TGGGCAGTGAGAGCAGCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAATGAGGATCGGGAAGCAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR TCA 90 bp CCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCATGCTCTCCACCATCTTaGTGTGGAAATCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: PSSLHSTGQNLHREDQSPCSPPS*CGNPRE
Trigger: TTCCCGTGGATTTCCACATCAAGATGGTGGAGAGCA...TGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AAGGCCAAAAGAACATACAAGCCCAGCTCTCTAGAGGCTCCAGTCAGAACTGGAGTCACTTCGCCTCTCTaGCATCTTGATGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: KAKRTYKPSSLEAPVRTGVTSPL*HLDAVA
Trigger: GGCCACGGCATCAAGATGTCAGAGAGGCGAAGTGAC...TCCAGTTCTGACTGGAGCCTCTAGAGAGCTGGGCTTGTATGTTCTTTTGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TCACAGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGAACCTTTTGGCGGTGTaGGCTCAATGTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQTSSGASGGPSYRPFHRNLLAV*AQCHSS
Trigger: AGAAGAATGACATTGAGCTCACACCGCCAAAAGGTT...CCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CCTTATCCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGAGGCAGCTCTGGACTTaGAGCCTTGTCGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PYPAQRAALELNLHGSFRRQLWT*SLVGRG
Trigger: GCCTCGCCCGACAAGGCTTCAAGTCCAGAGCTGCCT...CCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGGATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AGCTCCAAGTCGTCATCTTCCTCTTCCTCCATTGGTTCTGAAGATGGGGTCTCCGGCAGGTGGATTGCTTaGACCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SSKSSSSSSSIGSEDGVSGRWIA*TQEFET
Trigger: GGTCTCAAACTCCTGGGTTCAAGCAATCCACCTGCC...GGAGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAGATGACGACTTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp CCTCATTTTCTGCTTCACTTGACTCCTCCAGATAGGAGCTGCTCTCACTGCCCACCAAGCGTCACCAGGTaGAGGAAGCCATATTGGCCT +
Preference number: 4 (lower is better)
Translates to: PHFLLHLTPPDRSCSHCPPSVTR*RKPYWP
Trigger: AGGCCAATATGGCTTCCTGCACCTGGTGACGCTTGG...TGGGCAGTGAGAGCAGCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp GCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCTCTCACTGCCCACACTaGTGTTATAACTCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGSRAKVHTQAIFLPMSSSHCPH*CYNSGN
Trigger: GTTTCCGGAGTTATAACAGCAGTGTGGGCAGTGAGA...GGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATTCTCACTGCCCACACTaGTGTTATAACTCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDSHCPH*CYNSGN
Trigger: GTTTCCGGAGTTATAACAGCAGTGTGGGCAGTGAGA...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATGCCTTCTGTGTAGACTaGTCGTACCTTCTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDAFCVD*SYLLEE
Trigger: CTCTTCAAGAAGGTACGAGCAGTCTACACAGAAGGC...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAATGCTGAGGAGCCGATaGACCACTCGTTTCACCGTG +
Preference number: 4 (lower is better)
Translates to: AFTAPGRIYTERISLQAKMLRSR*TTRFTV
Trigger: CACGGTGAAACGAGTGGTGCATCGGCTCCTCAGCAT...TTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp ATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTGGCTTTCTTGGAGTTaGAGGAGTAGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IFLPMSSPGAFPLGNGSQWLSWS*RSSSWS
Trigger: GCTCCAGGAGCTACTCCTCCAACTCCAAGAAAGCCA...CTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp GTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAAGATACTGGCTTTCTTaGAGTTGGAGGAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VHTQAIFLPMSSPGAFPLRYWLS*SWRSSS
Trigger: GGAGCTACTCCTCCAACTCCAAGAAAGCCAGTATCT...TAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCACTGGTCATAGAGTaGGACGTGCTTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: QEQVAEPKCTLRPSSSQCPLVIE*DVLETA
Trigger: AGCTGTTTCAAGCACGTCCCACTCTATGACCAGTGG...ACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CGTCATATAGACCTTTCCACAGGGGAGGGCAGAAGCAACAGGCGGGTCCCAGGATTGCACCAGAAGTCATaGCTGGCGTCATTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RHIDLSTGEGRSNRRVPGLHQKS*LASFSK
Trigger: CTTTGAAAATGACGCCAGCCATGACTTCTGGTGCAA...TCCTGGGACCCGCCTGTTGCTTCTGCCCTCCCCTGTGGAAAGGTCTATATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATTCCACCATCTTGATGTaGAAATCCACGGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: STSWSLLLSCRDKLGPQHSTILM*KSTGSV
Trigger: GACGCTTCCCGTGGATTTCCACATCAAGATGGTGGA...ATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAGTCAGGGGGCTCCACATGTaGCACCAGAAGTCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: FTAPGRIYTERISLQAKVRGLHM*HQKSSS
Trigger: TGACGACGACTTCTGGTGCCACATGTGGAGCCCCCT...GACTTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACACCGACGAGATCTTCCTaGCACCCTGAGGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PAQRAALELNLHGSFRQTPTRSS*HPEGRP
Trigger: AGGACGACCCTCAGGGTGCCAGGAAGATCTCGTCGG...TGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAACAAGCCAAAGTCAGGTaGAGGCATGGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLHSTGQNLHREDQSPSQQAKVR*RHGGGG
Trigger: ACCACCACCACCATGCCTCCACCTGACTTTGGCTTG...TTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGTTCACAGACGAGTTCTaGGGCCTCAGGCGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILFTDEF*GLRRPV
Trigger: GACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGAA...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGCTGCCGAGACAAGCTaGGTCCCCAACATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILAAETS*VPNIPG
Trigger: CCCAGGGATGTTGGGGACCCAGCTTGTCTCGGCAGC...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTTCCTCCATTGGTTCTaGAGATGGGGTCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: STVQPSQHRAEFTQRGSVFLHWF*RWGLLN
Trigger: ATTGAGGAGACCCCATCTTCAGAACCAATGGAGGAA...GACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACTGCTCGTACCTTCTTaGAGAGGTAAGGAACGGCAT +
Preference number: 4 (lower is better)
Translates to: KSTSWSLLLSCRDKLGPQLLVPS*RGKERH
Trigger: ATGCCGTTCCTTACCTCTTCAAGAAGGTACGAGCAG...TTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp TCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCAGGCATTCTGCTTGGTaGATTTTTGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: STVQPSQHRAEFTQRGSVRHSAW*IFEAEA
Trigger: AGCCTCTGCCTCAAAAATTCACCAAGCAGAATGCCT...GACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCCAAAGGAATCTTGGATaGATTATTTTTAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ELWLEKVVHRRVLGPQAAQRNLG*IIFSGA
Trigger: AGCCCCGCTAAAAATAATTCATCCAAGATTCCTTTG...GGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACACCACAGCCATGCGAGTaGGTGACACCTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: PAQRAALELNLHGSFRQTPQPCE*VTPGTC
Trigger: ACAAGTCCCAGGTGTCACGCACTCGCATGGCTGTGG...TGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp AAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACTGCCCAGTTGAAAGTCTGTaGCTCATAACCTTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KAAQGHHTGRQNPHPGHCPVESL*LITFWR
Trigger: CCGCCAAAAGGTTATGAGGCACAGACTTTCAACTGG...GCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAGTAGCAGAGCCAAAGTaGACACTCAGGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: AFTAPGRIYTERISLQAKVAEPK*TLRPSS
Trigger: GGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTAC...TTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp ATGAGGCTGAGAGGCATTCTGCTTGGTGAATTTTTGAGGCAGAGGCTGCCCCCACCACTGGTCATAGAGTaGGACGTGCTTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: MRLRGILLGEFLRQRLPPPLVIE*DVLETA
Trigger: AGCTGTTTCAAGCACGTCCCACTCTATGACCAGTGG...TGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAGAATGCCTCTCAGCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCTTGCACCAGAAGTCATaGCTGGCGTCATTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LSTTSSRMPCLKGYFMLSLHQKS*LASFSK
Trigger: CTTTGAAAATGACGCCAGCCATGACTTCTGGTGCAA...GGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CCA 90 bp AATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACGTTAAAGAGTCTCGATaGAGCGGCTTTCGACTTGGT +
Preference number: 4 (lower is better)
Translates to: NPHPGHCFLAAETSWVPNVKESR*SGFRLG
Trigger: ACCAAGTCGAAAGCCGCTCCATCGAGACTCTTTAAC...GTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACAGAGTTCGACGGGGTAGATGTCTaGGGACTCGCAGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: QRAALELNLHGSFRQTEFDGVDV*GLAVHP
Trigger: TGGGTGGACTGCGAGTCCCCAGACATCTACCCCGTC...GAACTCTGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CAAACAGCTCCAAGTCGTCATCTTCCTCTTCCTCCATTGGTTCTGAAGATGGGGCACTCTGAAGGCACCTaGCTCAGAACCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: QTAPSRHLPLPPLVLKMGHSEGT*LRTTAI
Trigger: GATGGCAGTGGTTCTGAGCCAGGTGCCTTCAGAGTG...CCCCATCTTCAGAACCAATGGAGGAAGAGGAAGATGACGACTTGGAGCTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR TCA 90 bp AATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATTTTCTGCTTCACTTaGCTCCTCCAGATAGGAGCT +
Preference number: 4 (lower is better)
Translates to: NPHPGHCFLAAETSWVPNIFCFT*LLQIGA
Trigger: AGCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAAT...GTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp AAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACTGCAGTAGTTCTCCCAGTTaGAAGTCTGTGCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: KAAQGHHTGRQNPHPGHCSSSPS*KSVPHN
Trigger: GTTATGAGGCACAGACTTTCAACTGGGAGAACTACT...GCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CCTTATCCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCGTCAAAGTGGATGCTaGGGAGCCGATGCACCACTC +
Preference number: 4 (lower is better)
Translates to: PYPAQRAALELNLHGSFRRQSGC*GADAPL
Trigger: GAGTGGTGCATCGGCTCCTCAGCATCCACTTTGACG...CCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGGATAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGAGGCATTCTGCTTGGTaGATTTTTGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HRSPKSTSWSLLLSCRDKRHSAW*IFEAEA
Trigger: AGCCTCTGCCTCAAAAATTCACCAAGCAGAATGCCT...CTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp GCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAAGGAGCTGCTCTCACTaGCCACACTGCTGTTATAAC +
Preference number: 4 (lower is better)
Translates to: AFTAPGRIYTERISLQAKRSCSH*PHCCYN
Trigger: GTTATAACAGCAGTGTGGGCAGTGAGAGCAGCTCCT...TTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp AGCTCCAAGTCGTCATCTTCCTCTTCCTCCATTGGTTCTGAAGATGGGGTCTCCAGGAGCTGCTCTCACTaGCCACACTGCTGTTATAAC +
Preference number: 4 (lower is better)
Translates to: SSKSSSSSSSIGSEDGVSRSCSH*PHCCYN
Trigger: GTTATAACAGCAGTGTGGGCAGTGAGAGCAGCTCCT...GGAGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAGATGACGACTTGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGCCTCCAGATAGGAGCTaGTCTCACTGCCCACACTGC +
Preference number: 4 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILPPDRS*SHCPHC
Trigger: GCAGTGTGGGCAGTGAGAGCAGCTCCTATCTGGAGG...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTAGGAAATGGGAGTCAGTCCTTGCACCAGAAGTCATaGCTGGCGTCATTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FLPMSSPGAFPLGNGSQSLHQKS*LASFSK
Trigger: CTTTGAAAATGACGCCAGCCATGACTTCTGGTGCAA...GGACTGACTCCCATTTCCTAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGTCCCAGCCGTCAAAGTaGATGCTGAGGAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILSQPSK*MLRSRC
Trigger: GCATCGGCTCCTCAGCATCCACTTTGACGGCTGGGA...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp GCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAGTCAGGTGGAGTAGTTCTCCCAGTTaGAAGTCTGTGCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: APGRIYTERISLQAKVRWSSSPS*KSVPHN
Trigger: GTTATGAGGCACAGACTTTCAACTGGGAGAACTACT...CCACCTGACTTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp ACTCCGGAAACTATCATAGCCACCAAACAGCTCCAAGTCGTCATCTTCCTCTTCTTCCTCCATTGGTTCTaGAGATGGGGTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TPETIIATKQLQVVIFLFFLHWF*RWGLPA
Trigger: TGCTGGGAGACCCCATCTTCAGAACCAATGGAGGAA...GAAGAGGAAGATGACGACTTGGAGCTGTTTGGTGGCTATGATAGTTTCCGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR GCA 90 bp GCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGAAATCCACTCTCACTGCCCACACTaGTGTTATAACTCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: ALPKGVLHALHHLDVEIHSHCPH*CYNSGN
Trigger: GTTTCCGGAGTTATAACAGCAGTGTGGGCAGTGAGA...GTGGATTTCCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR GCA 90 bp AAGGCCAAAAGAACATACAAGCCCAGCTCTCTAGAGGCTCCAGTCAGAACTGGAAACCTTACAGACAGTTaGCACGCAGATGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KAKRTYKPSSLEAPVRTGNLTDS*HADVAQ
Trigger: CTGGGCAACATCTGCGTGGCAACTGTCTGTAAGGTT...TCCAGTTCTGACTGGAGCCTCTAGAGAGCTGGGCTTGTATGTTCTTTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACAGAGTTCCAGGGGACCTTATCCTaGTCAGAGAGCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: QRAALELNLHGSFRQTEFQGTLS*SESCSR
Trigger: TCTAGAGCAGCTCTCTGAGCAGGATAAGGTCCCCTG...GAACTCTGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGCCACATCCTGGTCACTaGTTCTTAGCTGCCGAGACA +
Preference number: 4 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILPHPGH*FLAAET
Trigger: TGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCTTATCCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGGGAAGGCTCCAATTTTaGCAGACCAGGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PYPAQRAALELNLHGSFRGRLQF*QTRQPC
Trigger: ACAAGGCTGCCTGGTCTGCCAAAATTGGAGCCTTCC...CCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGGATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp TTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAGTCTGCCTCATAACCTTTTaGCGGTGTGAGCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: FTAPGRIYTERISLQAKVCLITF*RCELNV
Trigger: GACATTGAGCTCACACCGCCAAAAGGTTATGAGGCA...GACTTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp AAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACTTGAAGCCATGGTTTaGGCAATCCATGTTAAAGAG +
Preference number: 4 (lower is better)
Translates to: KSTSWSLLLSCRDKLGPQLEAMV*AIHVKE
Trigger: CTCTTTAACATGGATTGCCCAAACCATGGCTTCAAG...TTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGCAGTCGTCTGTTTCCTaGTTGATGTTCTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILQSSVS*LMFSTE
Trigger: CTCCGTCGAGAACATCAAGCAGGAAACAGACGACTG...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACAAGAACCTCTTGGTCTTaGAGAAGAAGGCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PAQRAALELNLHGSFRQTRTSWS*RRRLPL
Trigger: CAAGGGAAGCCTTCTTCTCCAAGACCAAGAGGTTCT...TGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAACTGCTCGTACCTTCTTaGAGAGGTAAGGAACGGCAT +
Preference number: 4 (lower is better)
Translates to: LEAPVRTGPFNYKGILDELLVPS*RGKERH
Trigger: ATGCCGTTCCTTACCTCTTCAAGAAGGTACGAGCAG...TTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTTGTCCACCACAGCCATaGGAGTGCGTGACACCTGGG +
Preference number: 4 (lower is better)
Translates to: LQSELDPLTTKESWMNYFCPPQP*ECVTPG
Trigger: CCCAGGTGTCACGCACTCGCATGGCTGTGGTGGACA...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAAAACCTTACAGACAGTTaGCACGCAGATGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LEAPVRTGPFNYKGILDENLTDS*HADVAQ
Trigger: CTGGGCAACATCTGCGTGGCAACTGTCTGTAAGGTT...TTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR GCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTCCACAGCCATGCGAGTaGGTGACACCTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: LQSELDPLTTKESWMNYFPQPCE*VTPGTC
Trigger: ACAAGTCCCAGGTGTCACGCACTCGCATGGCTGTGG...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTTGGAGGAGTAGCTCCTaGAGCAGGAGACGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LQSELDPLTTKESWMNYFWRSSS*SRRRCR
Trigger: TCTGCAGCGTCTCCTGCTCCAGGAGCTACTCCTCCA...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTTCTTCTGACAGAAGGTaGCCGGGAAGATGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LQSELDPLTTKESWMNYFSSDRR*PGRWRG
Trigger: CCCACGCCATCTTCCCGGCCACCTTCTGTCAGAAGA...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTCAAGCCAAAGTCAGGTaGAGGCATGGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LQSELDPLTTKESWMNYFQAKVR*RHGGGG
Trigger: ACCACCACCACCATGCCTCCACCTGACTTTGGCTTG...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTGGAAGGCTCCAATTTTaGCAGACCAGGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LQSELDPLTTKESWMNYFGRLQF*QTRQPC
Trigger: ACAAGGCTGCCTGGTCTGCCAAAATTGGAGCCTTCC...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAACTTGAAGCCATGGTTTaGGCAATCCATGTTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LEAPVRTGPFNYKGILDELEAMV*AIHVKE
Trigger: CTCTTTAACATGGATTGCCCAAACCATGGCTTCAAG...TTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR TCA 90 bp CTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAACAAAGGAATCTTGGATaGATTATTTTTAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LEAPVRTGPFNYKGILDEQRNLG*IIFSGA
Trigger: AGCCCCGCTAAAAATAATTCATCCAAGATTCCTTTG...TTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CCA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTCTAGCGTTCCAGCTTTaGGAACTCTGGCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LQSELDPLTTKESWMNYFLAFQL*ELWLEK
Trigger: CTTTTCCAGCCAGAGTTCCCAAAGCTGGAACGCTAG...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS TCA 90 bp GTGTGGCCGGTTCTGCGGCCACAGGAGGCTGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGGGGTAGATGTCTGGGGACTCGCAGT +
Preference number: 5 (lower is better)
Translates to: VWPVLRPQEAGAGSR*AHTSRRGRCLGTRS
Trigger: ACTGCGAGTCCCCAGACATCTACCCCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCCAGCCTCCTGTGGCCGCAGAACCGGCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216237.10
CDS TCA 90 bp GAGAGCCCACACCTGCGGCCACAGGAGGCTGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGGGGTAGATGTCTGGGGACTCGCAGT +
Preference number: 5 (lower is better)
Translates to: ESPHLRPQEAGAGSR*AHTSRRGRCLGTRS
Trigger: ACTGCGAGTCCCCAGACATCTACCCCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCCAGCCTCCTGTGGCCGCAGGTGTGGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 90 bp GAGCTGGTAGCCGGTGAGCTCACACCAGCCGACGGGGTAGATGTCTaGGGACTCGCAGTCCACCCACTGGTCGTACTCGCTGTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: ELVAGELTPADGVDV*GLAVHPLVVLAVPA
Trigger: GGCTGGGACAGCGAGTACGACCAGTGGGTGGACTGCGAGTCCCCAGACATCTACCCCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS GCA 90 bp TTGTGGGCTCTGCTCTCCCGGCCTGCAGGCTCCACACGTCACAGCTaGTGGATATTCGGTTCTTGCGCTCAAGCCCCGCCCCTAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LWALLSRPAGSTRHS*WIFGSCAQAPPLRA
Trigger: GGCCCTTAGGGGCGGGGCTTGAGCGCAAGAACCGAATATCCAGCAGCTGTGACGTGTGGAGCCTGCAGGCCGGGAGAGCAGAGCCCACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 90 bp TGGGCTCTGCTCTCCCGGCCTGCAGGCTCCACACGTCACAGCTGCTaGATATTCGGTTCTTGCGCTCAAGCCCCGCCCCTAAGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: WALLSRPAGSTRHSC*IFGSCAQAPPLRAL
Trigger: CAAGGCCCTTAGGGGCGGGGCTTGAGCGCAAGAACCGAATATCCAGCAGCTGTGACGTGTGGAGCCTGCAGGCCGGGAGAGCAGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS TCA 90 bp TGGGTAGTTTACCTGCGGCCACAGGAGGCTGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGGGGTAGATGTCTGGGGACTCGCAGT +
Preference number: 5 (lower is better)
Translates to: WVVYLRPQEAGAGSR*AHTSRRGRCLGTRS
Trigger: ACTGCGAGTCCCCAGACATCTACCCCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCCAGCCTCCTGTGGCCGCAGGTAAACTACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS GCA 90 bp CGGCCTGCAGGCTCCACACGTCACAGCTGCTGGATATTCGGTTCTTaGGCTCAAGCCCCGCCCCTAAGGGCCTTGCCCTTCGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: RPAGSTRHSCWIFGS*AQAPPLRALPFVLA
Trigger: AGCCAGAACGAAGGGCAAGGCCCTTAGGGGCGGGGCTTGAGCGCAAGAACCGAATATCCAGCAGCTGTGACGTGTGGAGCCTGCAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS GCA 90 bp CCGGGGCTTCTCCATGAGACCTCAGTTTCGCCAAGCGTCACCAGGTaGAGGAAGCCATATTGGCCTGCCCCGTCGCTCTCCGCGAGAGCA +
Preference number: 5 (lower is better)
Translates to: PGLLHETSVSPSVTR*RKPYWPAPSLSARA
Trigger: TGCTCTCGCGGAGAGCGACGGGGCAGGCCAATATGGCTTCCTGCACCTGGTGACGCTTGGCGAAACTGAGGTCTCATGGAGAAGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481902.5
CDS GCA 90 bp TCGTACTCGCTGTCCCAGCCGTCAAAGTGGATGCTGAGGAGCCGATaGACCACTCGTTTCACCGTGGCCACACAGATGAGCCGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SYSLSQPSKWMLRSR*TTRFTVATQMSRGS
Trigger: GGAGCCCCGGCTCATCTGTGTGGCCACGGTGAAACGAGTGGTGCATCGGCTCCTCAGCATCCACTTTGACGGCTGGGACAGCGAGTACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS-3UTR CAA 90 bp GACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACGTGACACCTGGGACTaGTCCACCACTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: DPSRSSTVQPSQHRAEFTRDTWD*STTSSR
Trigger: GCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACG...TGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS CCA 90 bp GACATCTTGATGCCGTGGCCCACACGTCGTGACCAACCCACTGGGTaGATCAGGGGGCTCCACATGTGGCACCAGAAGTCGTCGTCACTG +
Preference number: 5 (lower is better)
Translates to: DILMPWPTRRDQPTG*IRGLHMWHQKSSSL
Trigger: CAGTGACGACGACTTCTGGTGCCACATGTGGAGCCCCCTGATCCACCCAGTGGGTTGGTCACGACGTGTGGGCCACGGCATCAAGATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 90 bp TCGCAGTCCACCCACTGGTCGTACTCGCTGTCCCAGCCGTCAAAGTaGATGCTGAGGAGCCGATGCACCACTCGTTTCACCGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: SQSTHWSYSLSQPSK*MLRSRCTTRFTVAT
Trigger: TGTGGCCACGGTGAAACGAGTGGTGCATCGGCTCCTCAGCATCCACTTTGACGGCTGGGACAGCGAGTACGACCAGTGGGTGGACTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS-3UTR CAA 90 bp GTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGAGGCACGCCTCTCTGACATCTaGATGCCGTGGCCCACACGT +
Preference number: 5 (lower is better)
Translates to: VVVEKRWAGFQLEARLEARLSDI*MPWPTR
Trigger: ACGTGTGGGCCACGGCATCAAGATGTCAGAGAGGCG...TGCCTCCAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp AGAGGAGCCGTAGGCGACCCCCGATTACTGTGTCCACCACAGCCATGCGAGTGCCAAGACCAGAGCGTCTaGTCCTGTTGGTGTCCCATC +
Preference number: 5 (lower is better)
Translates to: RGAVGDPRLLCPPQPCECQDQSV*SCWCPI
Trigger: GATGGGACACCAACAGGACAAGACGCTCTGGTCTTG...GCACTCGCATGGCTGTGGTGGACACAGTAATCGGGGGTCGCCTACGGCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp ACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACTTCCAGTCGGTGAACTaGGCATGGATGGTCCGTGGG +
Preference number: 5 (lower is better)
Translates to: TPAGPPPSSLHSTGQNLHFQSVN*AWMVRG
Trigger: CCCACGGACCATCCATGCCAAGTTCACCGACTGGAA...GTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS CCA 90 bp GGGGGCACTAGGATCTTGCTGTTGATGGCACACCAGCCAATGGGGTaGACATCCACTGTTCCCAGGTTGCACCAGAAGTCATGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: GGTRILLLMAHQPMG*TSTVPRLHQKSWLA
Trigger: CGCCAGCCATGACTTCTGGTGCAACCTGGGAACAGTGGATGTCCACCCCATTGGCTGGTGTGCCATCAACAGCAAGATCCTAGTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS-3UTR CAA 90 bp TGCGAGTGCGTGACACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCCAGAACCTCTTGGTCTaGGAGAAGAAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: CECVTPGTCPPLPAACPAQNLLV*EKKASL
Trigger: AAGGGAAGCCTTCTTCTCCAAGACCAAGAGGTTCTG...GGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACGCACTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGCTGTCCTGTCCCTaGAGAGTGGAGGAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDQLSCP*RVEEGS
Trigger: GGAGCCTTCCTCCACTCTCAAGGGACAGGACAGCTG...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGGGCATGCTCTCCACCATCTaGATGTGGAAATCCACGGGA +
Preference number: 5 (lower is better)
Translates to: RVLGPQAARHIDLSTGEGMLSTI*MWKSTG
Trigger: TCCCGTGGATTTCCACATCAAGATGGTGGAGAGCAT...GCCCTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGCGTGACACCTGGGACTaGTCCACCACTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QPHALPKGVLHALHHLDVRDTWD*STTSSR
Trigger: GCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACG...CACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp AGGTGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAGTTGCCACGCAGATGTaGCCCAGATTCAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RWRHGGGGRETLGWLPARVATQM*PRFRGS
Trigger: TGACCCCCTGAATCTGGGCAACATCTGCGTGGCAAC...TCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GAAGCCTTGTCGGGCGAGGCCACGTCTAGATGCTCTTCCTTCACACGCACAGCAGTTGCCACGCAGATGTaGCCCAGATTCAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: EALSGEATSRCSSFTRTAVATQM*PRFRGS
Trigger: TGACCCCCTGAATCTGGGCAACATCTGCGTGGCAAC...TGCTGTGCGTGTGAAGGAAGAGCATCTAGACGTGGCCTCGCCCGACAAGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CAA 90 bp ACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACCTGCTTGGTGAATTTTaGAGGCAGAGGCTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TPAGPPPSSLHSTGQNLHLLGEF*RQRLPP
Trigger: TGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAG...GTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCCCTTCTTCCCACCCTaGTTACCAGGGCTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: PKCTLRPSSSQCPPRGHFPFFPP*LPGLLR
Trigger: TCTGAGCAGCCCTGGTAACAAGGGTGGGAAGAAGGG...GAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS TCA 90 bp GTCATAGAGTGGGACCTGTGTGGCGATGAGAGTGTACCGAGAGAGTaGGCTAACTGTGCTAGCAGGGGAGACAGACTGCCTCACGGCCTC +
Preference number: 5 (lower is better)
Translates to: VIEWDLCGDESVPRE*ANCASRGDRLPHGL
Trigger: GAGGCCGTGAGGCAGTCTGTCTCCCCTGCTAGCACAGTTAGCTCACTCTCTCGGTACACTCTCATCGCCACACAGGTCCCACTCTATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS-3UTR CAA 90 bp AGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAGACCTTTCCACAGGGGAGACGCTGCAGAACCTCTaGGTCTTGGAGAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: RRVLGPQAARHIDLSTGETLQNL*VLEKKA
Trigger: AGCCTTCTTCTCCAAGACCAAGAGGTTCTGCAGCGT...CTCCCCTGTGGAAAGGTCTATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp ATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGGCAGACCAGGCAGCCTaGTGCAGGACTTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: MVVVVEKRWAGFQLEARLADQAA*CRTLAF
Trigger: AAAAGCCAAAGTCCTGCACAAGGCTGCCTGGTCTGC...CAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp ATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGCCGTTTCATGCAGCTGTCCTGTCCCTaGAGAGTGGAGGAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: ILMWKSTGSVLEPTSRFMQLSCP*RVEEGS
Trigger: GGAGCCTTCCTCCACTCTCAAGGGACAGGACAGCTG...CATGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp GAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCAGCACAGCATCACTGTaGAGCACCTCCACCTTCATC +
Preference number: 5 (lower is better)
Translates to: ELWLEKVVHRRVLGPQAASTASL*STSTFI
Trigger: GATGAAGGTGGAGGTGCTCAACAGTGATGCTGTGCT...GGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CACCTGGGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTTCCACTGTTCCCAGGTaGCACCAGAAGTCATGGCTG +
Preference number: 5 (lower is better)
Translates to: HLGLVHHFQPHALPKGVLSTVPR*HQKSWL
Trigger: CAGCCATGACTTCTGGTGCAACCTGGGAACAGTGGA...AAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp TTTAGCGGGGCTTCAGGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCGGGGGCACTAGGATCTaGCTGTTGATGGCACACCAG +
Preference number: 5 (lower is better)
Translates to: FSGASGAGSRAKVHTQAIGGTRI*LLMAHQ
Trigger: CTGGTGTGCCATCAACAGCAAGATCCTAGTGCCCCC...GATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GCCCACCAGCCGTTTCATGAGGTAGCCCTTCCAGTCGGTGAACTTGGCATGGATTTCCAGTCGGTGAACTaGGCATGGATGGTCCGTGGG +
Preference number: 5 (lower is better)
Translates to: AHQPFHEVALPVGELGMDFQSVN*AWMVRG
Trigger: CCCACGGACCATCCATGCCAAGTTCACCGACTGGAA...ATCCATGCCAAGTTCACCGACTGGAAGGGCTACCTCATGAAACGGCTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp GCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAGTCAGGTGGCGTGACACCTGGGACTaGTCCACCACTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: APGRIYTERISLQAKVRWRDTWD*STTSSR
Trigger: GCGGCTGGAAGTGGTGGACAAGTCCCAGGTGTCACG...CCACCTGACTTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GAACTCTGGCTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCGAACCTTACAGACAGTaGCCACGCAGATGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: ELWLEKVVHRRVLGPQAAEPYRQ*PRRCCP
Trigger: TGGGCAACATCTGCGTGGCAACTGTCTGTAAGGTTC...GGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAGCCAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATATTCTTTGTGGCCTCTTaGGCCTTCAGCGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LEKVVHRRVLGPQAARHIFFVAS*AFSGVA
Trigger: GGCCACACCGCTGAAGGCCAAAGAGGCCACAAAGAA...TATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp TCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCTGGACTTGAAGCCTaGTCGGGCGAGGCCACGTCT +
Preference number: 5 (lower is better)
Translates to: STVQPSQHRAEFTQRGSVSGLEA*SGEATS
Trigger: AGACGTGGCCTCGCCCGACAAGGCTTCAAGTCCAGA...GACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp ATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGCTGCTTGGTGAATTTTaGAGGCAGAGGCTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: MVVVVEKRWAGFQLEARLLLGEF*RQRLPP
Trigger: TGGGGGCAGCCTCTGCCTCAAAAATTCACCAAGCAG...CAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCACCCGATACCGTGCTaGAAACAGCTGACGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GLVHHFQPHALPKGVLHAHPIPC*KQLTGA
Trigger: TGCTCCCGTCAGCTGTTTCAAGCACGGTATCGGGTG...AGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS TCA 90 bp GCAACACAGCCACACCCCATCTCTCAATACTCCGGGGCTTCTCCATaGGACCTCAGTTTCGCCAAGCGTCACCAGGTGCAGGAAGCCATA +
Preference number: 5 (lower is better)
Translates to: ATQPHPISQYSGASP*DLSFAKRHQVQEAI
Trigger: TATGGCTTCCTGCACCTGGTGACGCTTGGCGAAACTGAGGTCTCATGGAGAAGCCCCGGAGTATTGAGAGATGGGGTGTGGCTGTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS CCA 90 bp GTCAGGAGCAGGGGCTGGGTGACGGGGCTCACTCTCTACTTAAAGTaGTCCATGAGACATCTCCACCTCATGCCAAAGAACGGAGATGGG +
Preference number: 5 (lower is better)
Translates to: VRSRGWVTGLTLYLK*SMRHLHLMPKNGDG
Trigger: CCCATCTCCGTTCTTTGGCATGAGGTGGAGATGTCTCATGGACCACTTTAAGTAGAGAGTGAGCCCCGTCACCCAGCCCCTGCTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS-3UTR CAA 90 bp ATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCCAGGCTGACGCTGCAGAACCTCTaGGTCTTGGAGAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: MVVVVEKRWAGFQLEARLTLQNL*VLEKKA
Trigger: AGCCTTCTTCTCCAAGACCAAGAGGTTCTGCAGCGT...CAGCCTGGCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GCTCTCCACCATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGACGCTGCAGAACCTCTaGGTCTTGGAGAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: ALHHLDVEIHGKRPGAHQTLQNL*VLEKKA
Trigger: AGCCTTCTTCTCCAAGACCAAGAGGTTCTGCAGCGT...CTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGATGGTGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp GGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATGCAGACCAGGCAGCCTaGTGCAGGACTTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GPPPSSLHSTGQNLHREDADQAA*CRTLAF
Trigger: AAAAGCCAAAGTCCTGCACAAGGCTGCCTGGTCTGC...ATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCTCCACTGTTCCCAGGTaGCACCAGAAGTCATGGCTG +
Preference number: 5 (lower is better)
Translates to: AGSRAKVHTQAIFLPMSSSTVPR*HQKSWL
Trigger: CAGCCATGACTTCTGGTGCAACCTGGGAACAGTGGA...GGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCCGGGGGCATTTCCTTTATCCACTGTTCCCAGGTaGCACCAGAAGTCATGGCTG +
Preference number: 5 (lower is better)
Translates to: VHTQAIFLPMSSPGAFPLSTVPR*HQKSWL
Trigger: CAGCCATGACTTCTGGTGCAACCTGGGAACAGTGGA...TAAAGGAAATGCCCCCGGGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GACCCCAGCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACAACTAGGATCTTGCTGTaGATGGCACACCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: DPSRSSTVQPSQHRAEFTTRILL*MAHQPM
Trigger: CATTGGCTGGTGTGCCATCAACAGCAAGATCCTAGT...TGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp ATCTTGATGTGGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGCCGTTTCATGGGGGGCACTAGGATCTaGCTGTTGATGGCACACCAG +
Preference number: 5 (lower is better)
Translates to: ILMWKSTGSVLEPTSRFMGGTRI*LLMAHQ
Trigger: CTGGTGTGCCATCAACAGCAAGATCCTAGTGCCCCC...CATGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp CAGAAAGCAGCTCAAGGCCACCACACAGGTCGCCAAAATCCACATCCTGGTCACGGGGGCACTAGGATCTaGCTGTTGATGGCACACCAG +
Preference number: 5 (lower is better)
Translates to: QKAAQGHHTGRQNPHPGHGGTRI*LLMAHQ
Trigger: CTGGTGTGCCATCAACAGCAAGATCCTAGTGCCCCC...GTGACCAGGATGTGGATTTTGGCGACCTGTGTGGTGGCCTTGAGCTGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp ACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCTTCCAGTCGGTGAACTaGGCATGGATGGTCCGTGGG +
Preference number: 5 (lower is better)
Translates to: TVQPSQHRAEFTQRGSVSFQSVN*AWMVRG
Trigger: CCCACGGACCATCCATGCCAAGTTCACCGACTGGAA...GGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp TCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATTTCTTTGTGGCCTCTTaGGCCTTCAGCGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: STSWSLLLSCRDKLGPQHFFVAS*AFSGVA
Trigger: GGCCACACCGCTGAAGGCCAAAGAGGCCACAAAGAA...ATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CACACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACATCTGGACTTGAAGCCTaGTCGGGCGAGGCCACGTCT +
Preference number: 5 (lower is better)
Translates to: HTGRQNPHPGHCFLAAETSGLEA*SGEATS
Trigger: AGACGTGGCCTCGCCCGACAAGGCTTCAAGTCCAGA...TGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS GCA 90 bp GTCGAAGCCCAAGACCAGAGCGTCTTGTCCTGTTGGTGTCCCATCTaGCAGCTGTCCTGTCCCTTGAGAGTGGAGGAAGGCTCCAATTTT +
Preference number: 5 (lower is better)
Translates to: VEAQDQSVLSCWCPI*QLSCPLRVEEGSNF
Trigger: AAAATTGGAGCCTTCCTCCACTCTCAAGGGACAGGACAGCTGGCAGATGGGACACCAACAGGACAAGACGCTCTGGTCTTGGGCTTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
ENST00000489136.5
CDS-3UTR CAA 90 bp TCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCCTTCCTCTTCCTCCATaGGTTCTGAAGATGGGGTCT +
Preference number: 5 (lower is better)
Translates to: STTSSRMPCLKGYFMLSTLPLPP*VLKMGS
Trigger: AGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAG...GGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp TCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCAGAAGAAGGCTTCCCTaGTACCCACGATACCACACA +
Preference number: 5 (lower is better)
Translates to: STTSSRMPCLKGYFMLSTRRRLP*YPRYHT
Trigger: TGTGTGGTATCGTGGGTACAAGGGAAGCCTTCTTCT...GGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp TGGAGGCATGGTGGTGGTGGTAGAGAAACGCTGGGCTGGCTTCCAGCTAGAAGCAGAAGAAGGCTTCCCTaGTACCCACGATACCACACA +
Preference number: 5 (lower is better)
Translates to: WRHGGGGRETLGWLPARSRRRLP*YPRYHT
Trigger: TGTGTGGTATCGTGGGTACAAGGGAAGCCTTCTTCT...GCTTCTAGCTGGAAGCCAGCCCAGCGTTTCTCTACCACCACCACCATGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGCAGACCAGGCAGCCTaGTGCAGGACTTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: QPHALPKGVLHALHHLDVADQAA*CRTLAF
Trigger: AAAAGCCAAAGTCCTGCACAAGGCTGCCTGGTCTGC...CACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp CCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCACAAGACCAGAGCGTCTaGTCCTGTTGGTGTCCCATC +
Preference number: 5 (lower is better)
Translates to: PSSLHSTGQNLHREDQSPQDQSV*SCWCPI
Trigger: GATGGGACACCAACAGGACAAGACGCTCTGGTCTTG...TGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CTGGAAAAGGTGGTTCACAGACGAGTTCTGGGGCCTCAGGCGGCCCGTCATATAAGCACAGCATCACTGTaGAGCACCTCCACCTTCATC +
Preference number: 5 (lower is better)
Translates to: LEKVVHRRVLGPQAARHISTASL*STSTFI
Trigger: GATGAAGGTGGAGGTGCTCAACAGTGATGCTGTGCT...TATATGACGGGCCGCCTGAGGCCCCAGAACTCGTCTGTGAACCACCTTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGATGCTCTCCACCATCTaGATGTGGAAATCCACGGGA +
Preference number: 5 (lower is better)
Translates to: AGPPPSSLHSTGQNLHREMLSTI*MWKSTG
Trigger: TCCCGTGGATTTCCACATCAAGATGGTGGAGAGCAT...CTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp TCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATGCTCTCCACCATCTaGATGTGGAAATCCACGGGA +
Preference number: 5 (lower is better)
Translates to: STTSSRMPCLKGYFMLSTMLSTI*MWKSTG
Trigger: TCCCGTGGATTTCCACATCAAGATGGTGGAGAGCAT...GGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp GGAGCAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCAGCTTCATGCCCACCTaGAAGCCATGGTTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: GAGSRAKVHTQAIFLPMSSFMPT*KPWFGQ
Trigger: TTGCCCAAACCATGGCTTCAAGGTGGGCATGAAGCT...GGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GCAGGTCCTCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGTCGTCTGTTTCCTGCTaGATGTTCTCGACGGAGACA +
Preference number: 5 (lower is better)
Translates to: AGPPPSSLHSTGQNLHRESSVSC*MFSTET
Trigger: TGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGA...CTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGAGGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS TCA 90 bp TTGGTTCTGAAGATGGGGTCTCCTCAATACTCCGGGGCTTCTCCATaGGACCTCAGTTTCGCCAAGCGTCACCAGGTGCAGGAAGCCATA +
Preference number: 5 (lower is better)
Translates to: LVLKMGSPQYSGASP*DLSFAKRHQVQEAI
Trigger: TATGGCTTCCTGCACCTGGTGACGCTTGGCGAAACTGAGGTCTCATGGAGAAGCCCCGGAGTATTGAGGAGACCCCATCTTCAGAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216237.10
ENST00000466589.5
ENST00000481902.5
CDS TCA 90 bp CTTTGTGGCCTCTTTGGCCTTCAGCGGTGTGGCCGGTTCTGTTGTTaGAAGACAAGGGTGAAAGAGATGAGAAGAGGGTCCCTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LCGLFGLQRCGRFCC*KTRVKEMRRGSLGG
Trigger: TCCTCCCAGGGACCCTCTTCTCATCTCTTTCACCCTTGTCTTTCAACAACAGAACCGGCCACACCGCTGAAGGCCAAAGAGGCCACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466589.5
ENST00000479978.5
CDS TCA 90 bp AGGACTGGTTTCTTACTGTATCATTTTGGGCACATGATGCCTTGGTaGGCCTCGATCCCTTCGTCCCTGTGCCAGCCCGAGCAATGGCAG +
Preference number: 5 (lower is better)
Translates to: RTGFLLYHFGHMMPW*ASIPSSLCQPEQWQ
Trigger: CTGCCATTGCTCGGGCTGGCACAGGGACGAAGGGATCGAGGCTCACCAAGGCATCATGTGCCCAAAATGATACAGTAAGAAACCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS GCA 90 bp AGCAGGGGAGACAGACTGCCTCACGGCCTCAGTCAAGTCCTCGTTTaGACCTCAACTTTTCACATCACCCACTGTGTGCAGAACCAGCTA +
Preference number: 5 (lower is better)
Translates to: SRGDRLPHGLSQVLV*TSTFHITHCVQNQL
Trigger: TAGCTGGTTCTGCACACAGTGGGTGATGTGAAAAGTTGAGGTGCAAACGAGGACTTGACTGAGGCCGTGAGGCAGTCTGTCTCCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS GCA 90 bp GTGTACCGAGAGAGTGAGCTAACTGTGCTAGCAGGGGAGACAGACTaGCTCACGGCCTCAGTCAAGTCCTCGTTTGCACCTCAACTTTTC +
Preference number: 5 (lower is better)
Translates to: VYRESELTVLAGETD*LTASVKSSFAPQLF
Trigger: GAAAAGTTGAGGTGCAAACGAGGACTTGACTGAGGCCGTGAGGCAGTCTGTCTCCCCTGCTAGCACAGTTAGCTCACTCTCTCGGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS-3UTR CAA 90 bp CCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCCTTCCTCTTCCTCCATaGGTTCTGAAGATGGGGTCT +
Preference number: 5 (lower is better)
Translates to: PHPGHCFLAAETSWVPNILPLPP*VLKMGS
Trigger: AGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAG...GATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GGACTTGTCCACCACTTCCAGCCGCATGCCCTGCCTAAAGGGGTACTTCATGCTACTAGGATCTTGCTGTaGATGGCACACCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: GLVHHFQPHALPKGVLHATRILL*MAHQPM
Trigger: CATTGGCTGGTGTGCCATCAACAGCAAGATCCTAGT...AGCATGAAGTACCCCTTTAGGCAGGGCATGCGGCTGGAAGTGGTGGACAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp TCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATGAACCTTACAGACAGTaGCCACGCAGATGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: STSWSLLLSCRDKLGPQHEPYRQ*PRRCCP
Trigger: TGGGCAACATCTGCGTGGCAACTGTCTGTAAGGTTC...ATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GAAGGCTCAGTCGTCTGTTTCCTGCTTGATGTTCTCGACGGAGACAGGCAGCTCAGCTTCATGCCCACCTaGAAGCCATGGTTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: EGSVVCFLLDVLDGDRQLSFMPT*KPWFGQ
Trigger: TTGCCCAAACCATGGCTTCAAGGTGGGCATGAAGCT...GAGCTGCCTGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGACTGAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS-3UTR CAA 90 bp CAGGTAGCAGAGCCAAAGTGCACACTCAGGCCATCTTCCTCCCAATGTCCTCCCTCTGTCATCCTTGTCTaGAGGGTTCTGTGTTCACGG +
Preference number: 5 (lower is better)
Translates to: QVAEPKCTLRPSSSQCPPSVILV*RVLCSR
Trigger: CCGTGAACACAGAACCCTCAAGACAAGGATGACAGA...GGGAGGACATTGGGAGGAAGATGGCCTGAGTGTGCACTTTGGCTCTGCTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS GCA 90 bp CTTGTTACCAGGGCTGCTCAGAGGGACCTGGGTAGTTTACCTGGGTaGACAAGGGCACGAACATATGACAGAGTGGGCAAGATGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LVTRAAQRDLGSLPG*TRARTYDRVGKMKE
Trigger: TTCCTTCATCTTGCCCACTCTGTCATATGTTCGTGCCCTTGTGCACCCAGGTAAACTACCCAGGTCCCTCTGAGCAGCCCTGGTAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 90 bp CTCAGCCCTGGCTTCAGCCAGTTGAGGTATCCCATTCCATCTCCCTaGTCACTTGAGTTTAGTTCATCACAGAACCCGGACACAGTTGCG +
Preference number: 5 (lower is better)
Translates to: LSPGFSQLRYPIPSP*SLEFSSSQNPDTVA
Trigger: CGCAACTGTGTCCGGGTTCTGTGATGAACTAAACTCAAGTGACCAGGGAGATGGAATGGGATACCTCAACTGGCTGAAGCCAGGGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS-3UTR CAA 90 bp AGTCTGGGGAGCCCAGTGAGGTTGCAATGGCAGCTAGATGTGTCCTCCAGCTCTCATTTTCTGCTTCACTaGACTCCTCCAGATAGGAGC +
Preference number: 5 (lower is better)
Translates to: SLGSPVRLQWQLDVSSSSHFLLH*TPPDRS
Trigger: GCTCCTATCTGGAGGAGTCAAGTGAAGCAGAAAATG...AGAGCTGGAGGACACATCTAGCTGCCATTGCAACCTCACTGGGCTCCCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp TCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGCTGGGTCCCCAACATCAGAACCTCTTGGTCTaGGAGAAGAAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: STSWSLLLSCRDKLGPQHQNLLV*EKKASL
Trigger: AAGGGAAGCCTTCTTCTCCAAGACCAAGAGGTTCTG...ATGTTGGGGACCCAGCTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp TCCACCGTCCAGCCTTCACAGCACCGGGCAGAATTTACACAGAGAGGATCAGTCACTAGGATCTTGCTGTaGATGGCACACCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: STVQPSQHRAEFTQRGSVTRILL*MAHQPM
Trigger: CATTGGCTGGTGTGCCATCAACAGCAAGATCCTAGT...GACTGATCCTCTCTGTGTAAATTCTGCCCGGTGCTGTGAAGGCTGGACGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGCAGACACGCCTCTCTGACATCTaGATGCCGTGGCCCACACGT +
Preference number: 5 (lower is better)
Translates to: PAQRAALELNLHGSFRQTRLSDI*MPWPTR
Trigger: ACGTGTGGGCCACGGCATCAAGATGTCAGAGAGGCG...TGTCTGCCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS TCA 90 bp CAGCTGTCATTGTTCAGGGCACTCCCCAGAGTTCAGTGGCAGTTCTaGAAGGAGGAGAGGAAGTGGCTTACTCTGGGTAAAAGACTCCCT +
Preference number: 5 (lower is better)
Translates to: QLSLFRALPRVQWQF*KEERKWLTLGKRLP
Trigger: AGGGAGTCTTTTACCCAGAGTAAGCCACTTCCTCTCCTCCTTTCAGAACTGCCACTGAACTCTGGGGAGTGCCCTGAACAATGACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS-3UTR CAA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGCAGCTGTCCTGTCCCTaGAGAGTGGAGGAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILQLSCP*RVEEGS
Trigger: GGAGCCTTCCTCCACTCTCAAGGGACAGGACAGCTG...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp TCCAAGTCGTCATCTTCCTCTTCCTCCATTGGTTCTGAAGATGGGGTCTCCCAGCTTCCTCTTCCTCCATaGGTTCTGAAGATGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SKSSSSSSSIGSEDGVSQLPLPP*VLKMGS
Trigger: AGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAG...CTGGGAGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAGATGACGACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453659.1
CDS-3UTR CAA 90 bp CACAGGTCGCCAAAATCCACATCCTGGTCACTGCTTCTTAGCTGCCGAGACAAGAGGACTTTGGCTTTTTaGGTCGGTGGTTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: HRSPKSTSWSLLLSCRDKRTLAF*VGGFPC
Trigger: ACAGGGAAAACCACCGACCAAAAAAGCCAAAGTCCT...CTTGTCTCGGCAGCTAAGAAGCAGTGACCAGGATGTGGATTTTGGCGACCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GCACCGGGCAGAATTTACACAGAGAGGATCAGTCTCCAAGCCAAAGTCAGGTGGAGGACTTTGGCTTTTTaGGTCGGTGGTTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: APGRIYTERISLQAKVRWRTLAF*VGGFPC
Trigger: ACAGGGAAAACCACCGACCAAAAAAGCCAAAGTCCT...CCACCTGACTTTGGCTTGGAGACTGATCCTCTCTGTGTAAATTCTGCCCGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp GCCCTGCCTAAAGGGGTACTTCATGCTCTCCACCATCTTGATGTGGAAATCCACAGGACTTTGGCTTTTTaGGTCGGTGGTTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: ALPKGVLHALHHLDVEIHRTLAF*VGGFPC
Trigger: ACAGGGAAAACCACCGACCAAAAAAGCCAAAGTCCT...GTGGATTTCCACATCAAGATGGTGGAGAGCATGAAGTACCCCTTTAGGCAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450939.1
CDS-3UTR CAA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGCAAGACCAGAGCGTCTaGTCCTGTTGGTGTCCCATC +
Preference number: 5 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILQDQSV*SCWCPI
Trigger: GATGGGACACCAACAGGACAAGACGCTCTGGTCTTG...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS CCA 90 bp TGCGCTAGCCCAGGCACGCAGGGGCAGGCTTTTTACAAAGCAAATTaGATTATATGTGTTAGACACAAGGATGATGCAACTCCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: CASPGTQGQAFYKAN*IICVRHKDDATPWK
Trigger: TTTCCAGGGAGTTGCATCATCCTTGTGTCTAACACATATAATCCAATTTGCTTTGTAAAAAGCCTGCCCCTGCGTGCCTGGGCTAGCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS-3UTR CAA 90 bp AGCTCTCTAGAGGCTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGCAGAACCTCTTGGTCTaGGAGAAGAAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SSLEAPVRTGPFNYKGILQNLLV*EKKASL
Trigger: AAGGGAAGCCTTCTTCTCCAAGACCAAGAGGTTCTG...CAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAGCCTCTAGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CCTTATCCTGCTCAGAGAGCTGCTCTAGAACTTAATTTACATGGCTCGTTCAGGTCGTCTGTTTCCTGCTaGATGTTCTCGACGGAGACA +
Preference number: 5 (lower is better)
Translates to: PYPAQRAALELNLHGSFRSSVSC*MFSTET
Trigger: TGTCTCCGTCGAGAACATCAAGCAGGAAACAGACGA...CCTGAACGAGCCATGTAAATTAAGTTCTAGAGCAGCTCTCTGAGCAGGATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS TCA 90 bp TATACTTTCCTTCAATCATCATACAAACCTGGGCTGTGGGCATTATaGCCCCCTTGTTTACACACAGCCATCCACCTGCAAGTTTACTCT +
Preference number: 5 (lower is better)
Translates to: YTFLQSSYKPGLWAL*PPCLHTAIHLQVYS
Trigger: AGAGTAAACTTGCAGGTGGATGGCTGTGTGTAAACAAGGGGGTCATAATGCCCACAGCCCAGGTTTGTATGATGATTGAAGGAAAGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 90 bp CTGATATTAGCACAAATATACTTTCCTTCAATCATCATACAAACCTaGGCTGTGGGCATTATGACCCCCTTGTTTACACACAGCCATCCA +
Preference number: 5 (lower is better)
Translates to: LILAQIYFPSIIIQT*AVGIMTPLFTHSHP
Trigger: TGGATGGCTGTGTGTAAACAAGGGGGTCATAATGCCCACAGCCCAGGTTTGTATGATGATTGAAGGAAAGTATATTTGTGCTAATATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS-3UTR CAA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTCTTCCTCTTCCTCCATaGGTTCTGAAGATGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LQSELDPLTTKESWMNYFLPLPP*VLKMGS
Trigger: AGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAG...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS-3UTR CAA 90 bp CTCCAGTCAGAACTGGACCCTTTAACTACAAAGGAATCTTGGATGAATTATTTTAGAAGAAGGCTTCCCTaGTACCCACGATACCACACA +
Preference number: 5 (lower is better)
Translates to: LQSELDPLTTKESWMNYFRRRLP*YPRYHT
Trigger: TGTGTGGTATCGTGGGTACAAGGGAAGCCTTCTTCT...AAAATAATTCATCCAAGATTCCTTTGTAGTTAAAGGGTCCAGTTCTGACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216237.10
ENST00000452106.5
CDS TCA 72 bp CACCTGCGGCCACAGGAGGCTGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGGGGTAGATGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: HLRPQEAGAGSR*AHTSRRGRCLG
Trigger: CCCCAGACATCTACCCCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCCAGCCTCCTGTGGCCGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS TCA 72 bp GTTCTGCGGCCACAGGAGGCTGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGGGGTAGATGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: VLRPQEAGAGSR*AHTSRRGRCLG
Trigger: CCCCAGACATCTACCCCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCCAGCCTCCTGTGGCCGCAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216237.10
CDS TCA 72 bp TACCTGCGGCCACAGGAGGCTGGAGCTGGTAGCCGGTaGGCTCACACCAGCCGACGGGGTAGATGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: YLRPQEAGAGSR*AHTSRRGRCLG
Trigger: CCCCAGACATCTACCCCGTCGGCTGGTGTGAGCTCACCGGCTACCAGCTCCAGCCTCCTGTGGCCGCAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452106.5
CDS TCA 72 bp GCCGATGCACCACTCGTTTCACCGTGGCCACACAGATaGGCCGGGGCTCCATCAGGTCCACGGCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ADAPLVSPWPHR*AGAPSGPRPPA
Trigger: AGCTGGAGGCCGTGGACCTGATGGAGCCCCGGCTCATCTGTGTGGCCACGGTGAAACGAGTGGTGCATCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS GCA 72 bp CTGCTCTCCCGGCCTGCAGGCTCCACACGTCACAGCTaGTGGATATTCGGTTCTTGCGCTCAAGCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: LLSRPAGSTRHS*WIFGSCAQAPP
Trigger: GGGCGGGGCTTGAGCGCAAGAACCGAATATCCAGCAGCTGTGACGTGTGGAGCCTGCAGGCCGGGAGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CAA 90 bp CCGGCCTGCAGGCTCCACACGTCACAGCTGCTGGATATTCGGTTCTaGCGCTCAAGCCCCGCCCCTAAGGGCCTTGCCCTTCGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: PACRLHTSQLLDIRF*RSSPAPKGLALRSG
Trigger: GCCAGAACGAAGGGCAAGGCCCTTAGGGGCGGGGCTTGAGCGCAAGAACCGAATATCCAGCAGCTGTGACGTGTGGAGCCTGCAGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 72 bp ATGCCGTGGCCCACACGTCGTGACCAACCCACTGGGTaGATCAGGGGGCTCCACATGTGGCACCAGAAGTCG +
Preference number: 6 (lower is better)
Translates to: MPWPTRRDQPTG*IRGLHMWHQKS
Trigger: CGACTTCTGGTGCCACATGTGGAGCCCCCTGATCCACCCAGTGGGTTGGTCACGACGTGTGGGCCACGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 72 bp CTCTCCCGGCCTGCAGGCTCCACACGTCACAGCTGCTaGATATTCGGTTCTTGCGCTCAAGCCCCGCCCCTA +
Preference number: 6 (lower is better)
Translates to: LSRPAGSTRHSC*IFGSCAQAPPL
Trigger: TAGGGGCGGGGCTTGAGCGCAAGAACCGAATATCCAGCAGCTGTGACGTGTGGAGCCTGCAGGCCGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS TCA 72 bp GGTCGTACTCGCTGTCCCAGCCGTCAAAGTGGATGCTaGGGAGCCGATGCACCACTCGTTTCACCGTGGCCA +
Preference number: 6 (lower is better)
Translates to: GRTRCPSRQSGC*GADAPLVSPWP
Trigger: TGGCCACGGTGAAACGAGTGGTGCATCGGCTCCTCAGCATCCACTTTGACGGCTGGGACAGCGAGTACGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS GCA 72 bp CTCCATGAGACCTCAGTTTCGCCAAGCGTCACCAGGTaGAGGAAGCCATATTGGCCTGCCCCGTCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LHETSVSPSVTR*RKPYWPAPSLS
Trigger: GGAGAGCGACGGGGCAGGCCAATATGGCTTCCTGCACCTGGTGACGCTTGGCGAAACTGAGGTCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481902.5
CDS CCA 72 bp GACCAACCCACTGGGTGGATCAGGGGGCTCCACATGTaGCACCAGAAGTCGTCGTCACTGTCACCATCCTCG +
Preference number: 6 (lower is better)
Translates to: DQPTGWIRGLHM*HQKSSSLSPSS
Trigger: CGAGGATGGTGACAGTGACGACGACTTCTGGTGCCACATGTGGAGCCCCCTGATCCACCCAGTGGGTTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 72 bp GTTTCGCCAAGCGTCACCAGGTGCAGGAAGCCATATTaGCCTGCCCCGTCGCTCTCCGCGAGAGCACTCATT +
Preference number: 6 (lower is better)
Translates to: VSPSVTRCRKPY*PAPSLSARALI
Trigger: AATGAGTGCTCTCGCGGAGAGCGACGGGGCAGGCCAATATGGCTTCCTGCACCTGGTGACGCTTGGCGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481902.5
CDS CAA 72 bp AGGCTCCACACGTCACAGCTGCTGGATATTCGGTTCTaGCGCTCAAGCCCCGCCCCTAAGGGCCTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: RLHTSQLLDIRF*RSSPAPKGLAL
Trigger: AAGGGCAAGGCCCTTAGGGGCGGGGCTTGAGCGCAAGAACCGAATATCCAGCAGCTGTGACGTGTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CAA 72 bp AGTTTCGCCAAGCGTCACCAGGTGCAGGAAGCCATATaGGCCTGCCCCGTCGCTCTCCGCGAGAGCACTCAT +
Preference number: 6 (lower is better)
Translates to: SFAKRHQVQEAI*ACPVALRESTH
Trigger: ATGAGTGCTCTCGCGGAGAGCGACGGGGCAGGCCAATATGGCTTCCTGCACCTGGTGACGCTTGGCGAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481902.5
CDS GCA 72 bp CTGTCCCAGCCGTCAAAGTGGATGCTGAGGAGCCGATaGACCACTCGTTTCACCGTGGCCACACAGATGAGC +
Preference number: 6 (lower is better)
Translates to: LSQPSKWMLRSR*TTRFTVATQMS
Trigger: GCTCATCTGTGTGGCCACGGTGAAACGAGTGGTGCATCGGCTCCTCAGCATCCACTTTGACGGCTGGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS GCA 72 bp AACAAGAGTGCTGTTGTGGGCTCTGCTCTCCCGGCCTaGAGGCTCCACACGTCACAGCTGCTGGATATTCGG +
Preference number: 6 (lower is better)
Translates to: NKSAVVGSALPA*RLHTSQLLDIR
Trigger: CCGAATATCCAGCAGCTGTGACGTGTGGAGCCTGCAGGCCGGGAGAGCAGAGCCCACAACAGCACTCTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 72 bp ACCCACTGGTCGTACTCGCTGTCCCAGCCGTCAAAGTaGATGCTGAGGAGCCGATGCACCACTCGTTTCACC +
Preference number: 6 (lower is better)
Translates to: THWSYSLSQPSK*MLRSRCTTRFT
Trigger: GGTGAAACGAGTGGTGCATCGGCTCCTCAGCATCCACTTTGACGGCTGGGACAGCGAGTACGACCAGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 72 bp GGCACATCAGTTAAGGGCTCACTGCCGACCTTGATGTaGAAATCCACGGGAAGCGTCCTGGAGCCCACCAGC +
Preference number: 6 (lower is better)
Translates to: GTSVKGSLPTLM*KSTGSVLEPTS
Trigger: GCTGGTGGGCTCCAGGACGCTTCCCGTGGATTTCCACATCAAGGTCGGCAGTGAGCCCTTAACTGATGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449635.5
CDS TCA 72 bp CATGGATGGTCCGTGGGGGCACTAGGATCTTGCTGTTaGTGGCACACCAGCCAATGGGGTGGACATCCACTG +
Preference number: 6 (lower is better)
Translates to: HGWSVGALGSCC*WHTSQWGGHPL
Trigger: CAGTGGATGTCCACCCCATTGGCTGGTGTGCCATCAACAGCAAGATCCTAGTGCCCCCACGGACCATCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS GCA 72 bp CATGAAATGGAGCGAGTGGTAACGCCATCCGTCTCCTaGCCAGACCTCCCCACTGTCACTGTCCAGCCTGAA +
Preference number: 6 (lower is better)
Translates to: HEMERVVTPSVS*PDLPTVTVQPE
Trigger: TTCAGGCTGGACAGTGACAGTGGGGAGGTCTGGGCAGGAGACGGATGGCGTTACCACTCGCTCCATTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 72 bp CCAGTCGAAGCCCAAGACCAGAGCGTCTTGTCCTGTTaGTGTCCCATCTGCCAGCTGTCCTGTCCCTTGAGA +
Preference number: 6 (lower is better)
Translates to: PVEAQDQSVLSC*CPICQLSCPLR
Trigger: TCTCAAGGGACAGGACAGCTGGCAGATGGGACACCAACAGGACAAGACGCTCTGGTCTTGGGCTTCGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
ENST00000489136.5
CDS CAA 72 bp GCATGGATGGTCCGTGGGGGCACTAGGATCTTGCTGTaGATGGCACACCAGCCAATGGGGTGGACATCCACT +
Preference number: 6 (lower is better)
Translates to: AWMVRGGTRILL*MAHQPMGWTST
Trigger: AGTGGATGTCCACCCCATTGGCTGGTGTGCCATCAACAGCAAGATCCTAGTGCCCCCACGGACCATCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS TCA 72 bp TGGGACCTGTGTGGCGATGAGAGTGTACCGAGAGAGTaGGCTAACTGTGCTAGCAGGGGAGACAGACTGCCT +
Preference number: 6 (lower is better)
Translates to: WDLCGDESVPRE*ANCASRGDRLP
Trigger: AGGCAGTCTGTCTCCCCTGCTAGCACAGTTAGCTCACTCTCTCGGTACACTCTCATCGCCACACAGGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS GCA 72 bp AGGGCTGCTCAGAGGGACCTGGGTAGTTTACCTGGGTaGACAAGGGCACGAACATATGACAGAGTGGGCAAG +
Preference number: 6 (lower is better)
Translates to: RAAQRDLGSLPG*TRARTYDRVGK
Trigger: CTTGCCCACTCTGTCATATGTTCGTGCCCTTGTGCACCCAGGTAAACTACCCAGGTCCCTCTGAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 72 bp TTCCCACCCTTGTTACCAGGGCTGCTCAGAGGGACCTaGGTAGTTTACCTGGGTGCACAAGGGCACGAACAT +
Preference number: 6 (lower is better)
Translates to: FPPLLPGLLRGT*VVYLGAQGHEH
Trigger: ATGTTCGTGCCCTTGTGCACCCAGGTAAACTACCCAGGTCCCTCTGAGCAGCCCTGGTAACAAGGGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 72 bp AGTAGCTCCTGGAGCAGGAGACGCTGCAGAACCTCTTaGTCTTGGAGAAGAAGGCTTCCCTTGTACCCACGA +
Preference number: 6 (lower is better)
Translates to: SSSWSRRRCRTS*SWRRRLPLYPR
Trigger: TCGTGGGTACAAGGGAAGCCTTCTTCTCCAAGACCAAGAGGTTCTGCAGCGTCTCCTGCTCCAGGAGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
ENST00000489136.5
CDS CCA 72 bp GTCCTGTCCCTTGAGAGTGGAGGAAGGCTCCAATTTTaGCAGACCAGGCAGCCTTGTGCAGGACTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: VLSLESGGRLQF*QTRQPCAGLWL
Trigger: AAGCCAAAGTCCTGCACAAGGCTGCCTGGTCTGCCAAAATTGGAGCCTTCCTCCACTCTCAAGGGACAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
ENST00000489136.5
CDS CAA 72 bp TCCAGGAGAACCTTACAGACAGTTGCCACGCAGATGTaGCCCAGATTCAGGGGGTCAATGGCCTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SRRTLQTVATQM*PRFRGSMASSF
Trigger: GAAGCTGGAGGCCATTGACCCCCTGAATCTGGGCAACATCTGCGTGGCAACTGTCTGTAAGGTTCTCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS TCA 72 bp CTCCTCCTGGATTTCCCGGAGCTTAGGGACGTGGTGTaGAGACAAAACAAGAGTGCTGTTGTGGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LLLDFPELRDVV*RQNKSAVVGSA
Trigger: AGCAGAGCCCACAACAGCACTCTTGTTTTGTCTTCACACCACGTCCCTAAGCTCCGGGAAATCCAGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS TCA 72 bp TTCTTACTGTATCATTTTGGGCACATGATGCCTTGGTaGGCCTCGATCCCTTCGTCCCTGTGCCAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: FLLYHFGHMMPW*ASIPSSLCQPE
Trigger: CTCGGGCTGGCACAGGGACGAAGGGATCGAGGCTCACCAAGGCATCATGTGCCCAAAATGATACAGTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS GCA 72 bp ACCAGCCAATGGGGTGGACATCCACTGTTCCCAGGTTaGACCAGAAGTCATGGCTGGCGTCATTTTCAAAGC +
Preference number: 6 (lower is better)
Translates to: TSQWGGHPLFPG*TRSHGWRHFQS
Trigger: GCTTTGAAAATGACGCCAGCCATGACTTCTGGTGCAACCTGGGAACAGTGGATGTCCACCCCATTGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS GCA 72 bp GACAGACTGCCTCACGGCCTCAGTCAAGTCCTCGTTTaGACCTCAACTTTTCACATCACCCACTGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: DRLPHGLSQVLV*TSTFHITHCVQ
Trigger: CTGCACACAGTGGGTGATGTGAAAAGTTGAGGTGCAAACGAGGACTTGACTGAGGCCGTGAGGCAGTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 72 bp AGGATCTTGCTGTTGATGGCACACCAGCCAATGGGGTaGACATCCACTGTTCCCAGGTTGCACCAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: RILLLMAHQPMG*TSTVPRLHQKS
Trigger: TGACTTCTGGTGCAACCTGGGAACAGTGGATGTCCACCCCATTGGCTGGTGTGCCATCAACAGCAAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 72 bp AGGGGCTGGGTGACGGGGCTCACTCTCTACTTAAAGTaGTCCATGAGACATCTCCACCTCATGCCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: RGWVTGLTLYLK*SMRHLHLMPKN
Trigger: GTTCTTTGGCATGAGGTGGAGATGTCTCATGGACCACTTTAAGTAGAGAGTGAGCCCCGTCACCCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CAA 72 bp CACCAGCCAATGGGGTGGACATCCACTGTTCCCAGGTaGCACCAGAAGTCATGGCTGGCGTCATTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: HQPMGWTSTVPR*HQKSWLASFSK
Trigger: CTTTGAAAATGACGCCAGCCATGACTTCTGGTGCAACCTGGGAACAGTGGATGTCCACCCCATTGGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000449635.5
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CAA 72 bp AGACAGACTGCCTCACGGCCTCAGTCAAGTCCTCGTTaGCACCTCAACTTTTCACATCACCCACTGTGTGCA +
Preference number: 6 (lower is better)
Translates to: RQTASRPQSSPR*HLNFSHHPLCA
Trigger: TGCACACAGTGGGTGATGTGAAAAGTTGAGGTGCAAACGAGGACTTGACTGAGGCCGTGAGGCAGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS TCA 72 bp ACATCTCACAGACAGCTGGGAAGAGAACTTAGCACATaGCTCACCCGATATGACCACCTGGCTCAGAACCAC +
Preference number: 6 (lower is better)
Translates to: TSHRQLGRELST*LTRYDHLAQNH
Trigger: GTGGTTCTGAGCCAGGTGGTCATATCGGGTGAGTCATGTGCTAAGTTCTCTTCCCAGCTGTCTGTGAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481902.5
CDS CCA 72 bp GGCTTCAGCCAGTTGAGGTATCCCATTCCATCTCCCTaGTCACTTGAGTTTAGTTCATCACAGAACCCGGAC +
Preference number: 6 (lower is better)
Translates to: GFSQLRYPIPSP*SLEFSSSQNPD
Trigger: GTCCGGGTTCTGTGATGAACTAAACTCAAGTGACCAGGGAGATGGAATGGGATACCTCAACTGGCTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CAA 72 bp CAAACAGCTCCAAGTCGTCATCTTCCTCTTCCTCCATaGGTTCTGAAGATGGGGTCTCCTCAATACTCCGGG +
Preference number: 6 (lower is better)
Translates to: QTAPSRHLPLPP*VLKMGSPQYSG
Trigger: CCCGGAGTATTGAGGAGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAGATGACGACTTGGAGCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CAA 72 bp TGCAGAACCTCTTGGTCTTGGAGAAGAAGGCTTCCCTaGTACCCACGATACCACACATCTCACAGACAGCTG +
Preference number: 6 (lower is better)
Translates to: CRTSWSWRRRLP*YPRYHTSHRQL
Trigger: CAGCTGTCTGTGAGATGTGTGGTATCGTGGGTACAAGGGAAGCCTTCTTCTCCAAGACCAAGAGGTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
ENST00000489136.5
CDS CAA 72 bp GCAGACCAGGCAGCCTTGTGCAGGACTTTGGCTTTTTaGGTCGGTGGTTTTCCCTGTAACCTAGCCAAGATA +
Preference number: 6 (lower is better)
Translates to: ADQAALCRTLAF*VGGFPCNLAKI
Trigger: TATCTTGGCTAGGTTACAGGGAAAACCACCGACCAAAAAAGCCAAAGTCCTGCACAAGGCTGCCTGGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216237.10
ENST00000450939.1
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
ENST00000489136.5
CDS CAA 72 bp AATAAAGTGCCCCAGGACAGCACTGGACTGTTTCAGTaGCCTTCCCAGTACCTAATCCTCACTTTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: NKVPQDSTGLFQ*PSQYLILTFLP
Trigger: TGGCAGGAAAGTGAGGATTAGGTACTGGGAAGGCAACTGAAACAGTCCAGTGCTGTCCTGGGGCACTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CAA 72 bp CAAACAGCTCCAAGTCGTCATCTTCCTCTTCCTCCATaGGTTCTGAAGATGGGGTCTCCTGTAATCCCAGGA +
Preference number: 6 (lower is better)
Translates to: QTAPSRHLPLPP*VLKMGSPVIPG
Trigger: TCCTGGGATTACAGGAGACCCCATCTTCAGAACCAATGGAGGAAGAGGAAGATGACGACTTGGAGCTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489136.5
CDS CAA 90 bp CCTTCAATCATCATACAAACCTGGGCTGTGGGCATTATGACCCCCTaGTTTACACACAGCCATCCACCTGCAAGTTTACTCTCTACCTCC +
Preference number: 6 (lower is better)
Translates to: PSIIIQTWAVGIMTP*FTHSHPPASLLSTS
Trigger: GGAGGTAGAGAGTAAACTTGCAGGTGGATGGCTGTGTGTAAACAAGGGGGTCATAATGCCCACAGCCCAGGTTTGTATGATGATTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS TCA 72 bp CTTCAATCATCATACAAACCTGGGCTGTGGGCATTATaGCCCCCTTGTTTACACACAGCCATCCACCTGCAA +
Preference number: 6 (lower is better)
Translates to: LQSSYKPGLWAL*PPCLHTAIHLQ
Trigger: TTGCAGGTGGATGGCTGTGTGTAAACAAGGGGGTCATAATGCCCACAGCCCAGGTTTGTATGATGATTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 72 bp GCCATGGTTTGGGCAATCCATGTTAAAGAGTCTCGATaGAGCGGCTTTCGACTTGGTCTTCTCCAAGTAGTT +
Preference number: 6 (lower is better)
Translates to: AMVWAIHVKESR*SGFRLGLLQVV
Trigger: AACTACTTGGAGAAGACCAAGTCGAAAGCCGCTCCATCGAGACTCTTTAACATGGATTGCCCAAACCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216237.10
ENST00000452106.5
ENST00000466589.5
ENST00000479978.5
ENST00000481902.5
CDS CCA 72 bp TTTTCTTCTTTGTGGCCTCTTTGGCCTTCAGCGGTGTaGCCGGTTCTGTTGTTGAAAGACAAGGGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: FSSLWPLWPSAV*PVLLLKDKGER
Trigger: TCTTTCACCCTTGTCTTTCAACAACAGAACCGGCCACACCGCTGAAGGCCAAAGAGGCCACAAAGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466589.5
ENST00000479978.5
CDS CAA 72 bp ATCATACAAACCTGGGCTGTGGGCATTATGACCCCCTaGTTTACACACAGCCATCCACCTGCAAGTTTACTC +
Preference number: 6 (lower is better)
Translates to: IIQTWAVGIMTP*FTHSHPPASLL
Trigger: GAGTAAACTTGCAGGTGGATGGCTGTGTGTAAACAAGGGGGTCATAATGCCCACAGCCCAGGTTTGTATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479978.5
CDS CCA 72 bp GCACAAATATACTTTCCTTCAATCATCATACAAACCTaGGCTGTGGGCATTATGACCCCCTTGTTTACACAC +
Preference number: 6 (lower is better)
Translates to: AQIYFPSIIIQT*AVGIMTPLFTH
Trigger: GTGTGTAAACAAGGGGGTCATAATGCCCACAGCCCAGGTTTGTATGATGATTGAAGGAAAGTATATTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479978.5