Pregenerated sensors for L1TD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000240563

Ensembl transcript IDs: ENST00000498273.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	TTGAGACGGAGTGTCGCTCTGTGGCTCCGGCTGGAGTaGAGTGGTGTGATCTCGGCTCACTGCAAGCTCCGC	+
Preference number: 3 (lower is better) Translates to: LRRSVALWLRLE*SGVISAHCKLR Trigger: GCGGAGCTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCGGAGCCACAGAGCGACACTCCGTCTCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498273.2
3UTR CAA 72 bp	TTTGTAGACACTTTCGCCACATTGCCCAGGATGGCCTaGAACTCTTGGGCTCAAGTGACCCACCTGCCTTGG	+
Preference number: 4 (lower is better) Translates to: FVDTFATLPRMA*NSWAQVTHLPW Trigger: CCAAGGCAGGTGGGTCACTTGAGCCCAAGAGTTCAAGGCCATCCTGGGCAATGTGGCGAAAGTGTCTACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CCA 90 bp	TACGTCAATCAAGTCTCAGCAGTTCATCCGCCTCTGTACCTTCGCTaGGAAGACGAACTCCGCAGAGCAGGACTCGGGTCTACTCTAAGC	+
Preference number: 5 (lower is better) Translates to: YVNQVSAVHPPLYLR*EDELRRAGLGSTLS Trigger: GCTTAGAGTAGACCCGAGTCCTGCTCTGCGGAGTTCGTCTTCCCAGCGAAGGTACAGAGGCGGATGAACTGCTGAGACTTGATTGACGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS TCA 90 bp	CATCTCTGTCATCTATATTGCATAAGGTTTCTTCCATACTTCCCATaGCTTCGTAACTTCGTGATTCACCCTGGGGTAATTTCTTACCAT	+
Preference number: 5 (lower is better) Translates to: HLCHLYCIRFLPYFP*LRNFVIHPGVISYH Trigger: ATGGTAAGAAATTACCCCAGGGTGAATCACGAAGTTACGAAGTCATGGGAAGTATGGAAGAAACCTTATGCAATATAGATGACAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS GCA 90 bp	GGTTCAAAATCATTTTCTCTCAGAATGTTGAAGACATTACTCCATTaGTTACTAATATCCAGTGTTGCTGATGAAAGGTCGGCTACCAGG	+
Preference number: 5 (lower is better) Translates to: GSKSFSLRMLKTLLH*LLISSVADERSATR Trigger: CCTGGTAGCCGACCTTTCATCAGCAACACTGGATATTAGTAAGCAATGGAGTAATGTCTTCAACATTCTGAGAGAAAATGATTTTGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CCA 90 bp	TCATCCTCTCCATCCTTCCTACTCTCTCTTTCTGTAAATTCTAAATaGACATTGCGATTTCCATCTCTGTCATCTATATTGCATAAGGTT	+
Preference number: 5 (lower is better) Translates to: SSSPSFLLSLSVNSK*TLRFPSLSSILHKV Trigger: AACCTTATGCAATATAGATGACAGAGATGGAAATCGCAATGTCCATTTAGAATTTACAGAAAGAGAGAGTAGGAAGGATGGAGAGGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CCA 72 bp	CAAGTCTCAGCAGTTCATCCGCCTCTGTACCTTCGCTaGGAAGACGAACTCCGCAGAGCAGGACTCGGGTCT	+
Preference number: 6 (lower is better) Translates to: QVSAVHPPLYLR*EDELRRAGLGS Trigger: AGACCCGAGTCCTGCTCTGCGGAGTTCGTCTTCCCAGCGAAGGTACAGAGGCGGATGAACTGCTGAGACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS TCA 72 bp	TTGGTGCCTGGCGAAAAAGGAATCCGCCTGGACGACTaGGGAGCGAACAAAGTGAGGATGGAGCCTTGTAAC	+
Preference number: 6 (lower is better) Translates to: LVPGEKGIRLDD*GANKVRMEPCN Trigger: GTTACAAGGCTCCATCCTCACTTTGTTCGCTCCTCAGTCGTCCAGGCGGATTCCTTTTTCGCCAGGCACCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CAA 90 bp	GCTGGATATAGGATTCTAGGATTAAAGCCTTTTTCCAGCAGAACTTaGAAGACATTGCTCCATTTACTTCTAGCATCCAGTGTGTCCAGT	+
Preference number: 6 (lower is better) Translates to: AGYRILGLKPFSSRT*KTLLHLLLASSVSS Trigger: ACTGGACACACTGGATGCTAGAAGTAAATGGAGCAATGTCTTCAAAGTTCTGCTGGAAAAAGGCTTTAATCCTAGAATCCTATATCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS TCA 72 bp	CATCTATATTGCATAAGGTTTCTTCCATACTTCCCATaGCTTCGTAACTTCGTGATTCACCCTGGGGTAATT	+
Preference number: 6 (lower is better) Translates to: HLYCIRFLPYFP*LRNFVIHPGVI Trigger: AATTACCCCAGGGTGAATCACGAAGTTACGAAGTCATGGGAAGTATGGAAGAAACCTTATGCAATATAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CAA 72 bp	AAATGGACATTGCGATTTCCATCTCTGTCATCTATATaGCATAAGGTTTCTTCCATACTTCCCATGACTTCG	+
Preference number: 6 (lower is better) Translates to: KWTLRFPSLSSI*HKVSSILPMTS Trigger: CGAAGTCATGGGAAGTATGGAAGAAACCTTATGCAATATAGATGACAGAGATGGAAATCGCAATGTCCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CAA 72 bp	AGGATTCTAGGATTAAAGCCTTTTTCCAGCAGAACTTaGAAGACATTGCTCCATTTACTTCTAGCATCCAGT	+
Preference number: 6 (lower is better) Translates to: RILGLKPFSSRT*KTLLHLLLASS Trigger: ACTGGATGCTAGAAGTAAATGGAGCAATGTCTTCAAAGTTCTGCTGGAAAAAGGCTTTAATCCTAGAATCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CAA 72 bp	GATTCACCCTGGGGTAATTTCTTACCATCATTACTATaGTATTCGTTAGTGTTGTCTAATTTACCACTCAGC	+
Preference number: 6 (lower is better) Translates to: DSPWGNFLPSLL*YSLVLSNLPLS Trigger: GCTGAGTGGTAAATTAGACAACACTAACGAATACAATAGTAATGATGGTAAGAAATTACCCCAGGGTGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CAA 72 bp	TGTACACTAGTAGATACATCAGACATTGTGGATATGTaGTCAAGACTGGATTCTGTTTTTAATTCCTACAGA	+
Preference number: 6 (lower is better) Translates to: CTLVDTSDIVDM*SRLDSVFNSYR Trigger: TCTGTAGGAATTAAAAACAGAATCCAGTCTTGACAACATATCCACAATGTCTGATGTATCTACTAGTGTACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498273.2
CDS CAA 72 bp	TTCCTACTCTCTCTTTCTGTAAATTCTAAATGGACATaGCGATTTCCATCTCTGTCATCTATATTGCATAAG	+
Preference number: 6 (lower is better) Translates to: FLLSLSVNSKWT*RFPSLSSILHK Trigger: CTTATGCAATATAGATGACAGAGATGGAAATCGCAATGTCCATTTAGAATTTACAGAAAGAGAGAGTAGGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498273.2