RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KXD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105700

Ensembl transcript IDs: ENST00000222307.9, ENST00000539106.5, ENST00000540691.5, ENST00000595073.5, ENST00000595870.5, ENST00000596244.1, ENST00000596785.5, ENST00000597438.5, ENST00000598830.5, ENST00000599000.5, ENST00000599319.5, ENST00000600099.1, ENST00000600372.5, ENST00000600654.5, ENST00000600796.1, ENST00000601630.5, ENST00000602094.5

Found 697 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCGGGCAGCAGGGCTATTCGCCCGTCATCTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCTGGGGAGCCAGGCTGGACATGGGAC +
Preference number: 1 (lower is better)
Translates to: TGQQGYSPVISSSSV*LRPLMAGEPGWTWD
Trigger: GTCCCATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACGGGCGAATAGCCCTGCTGCCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR GCA 90 bp GCAGCAAAGGAGCCCTGGATGACAGAACAAGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGG +
Preference number: 1 (lower is better)
Translates to: AAKEPWMTEQGRVTR*HLVCCCPETPSRHR
Trigger: CCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGGCTCCTTTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCAT +
Preference number: 1 (lower is better)
Translates to: LRGDRACAPQGGPDR*WGTSGSGVWEPSKH
Trigger: ATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 90 bp AGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCT +
Preference number: 1 (lower is better)
Translates to: RGDRACAPQGGPDRW*GTSGSGVWEPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 90 bp GTAAACATCGGGTACAAAAATATTCCATTAAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCC +
Preference number: 1 (lower is better)
Translates to: VNIGYKNIPLNSFPR*LRLLHGGLQRGLLA
Trigger: GGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAATGGAATATTTTTGTACCCGATGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000602094.5
3UTR TCA 90 bp GGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTaGGATACCAAGGAGAAAGTATTTGATACTTTTACGGAGCAAGGG +
Preference number: 1 (lower is better)
Translates to: GQPPSQDFYLSQKPP*DTKEKVFDTFTEQG
Trigger: CCCTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp CACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: HLVCCCPETPSRHRAAGLSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...TAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR CCA 90 bp TGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCATGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 2 (lower is better)
Translates to: CCPETPSRHRAAGLFARHAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...ATGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR CCA 90 bp GTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 2 (lower is better)
Translates to: VGAGVGWGELRGDRACAPRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...AGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 2 (lower is better)
Translates to: TLSRGGSVCSMEAFREACGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTACGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: HLVCCCPETPSRHRAAGLRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...TAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR TCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: GVGWGELRGDRACAPQGGCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp CACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTAGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: HLVCCCPETPSRHRAAGLARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...TAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR GCA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LRGDRACAPQGGPDRWWGGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...CCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp ACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 2 (lower is better)
Translates to: TLYAAALRPPQGTGQQGYEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...ATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR TCA 90 bp TATTCGCCCGTCATCTCCTCGTCATCTGTCTGGCTGCGGCCGTTGATGGCTGGGTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: YSPVISSSSVWLRPLMAGCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...CCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACGGGCGAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR GCA 90 bp TTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: FPRWLRLLHGGLQRGLLAHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...GGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: GGLQRGLLAPQVPHLYSERCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...CTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: ELVGAGVGWGELRGDRACGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...ACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: ELVGAGVGWGELRGDRACGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...ACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: KAELVGAGVGWGELRGDRGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTCGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 2 (lower is better)
Translates to: KAELVGAGVGWGELRGDRRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AACACAGAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: NTELSTLRAEWMASLRLKPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...CTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp ACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: TLYAAALRPPQGTGQQGYVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...ATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR TCA 90 bp GACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: DRWWGTSGSGVWEPSKHSCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 2 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: ELRGDRACAPQGGPDRWWCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...CCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: GWGELRGDRACAPQGGPDCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp TATTCGCCCGTCATCTCCTCGTCATCTGTCTGGCTGCGGCCGTTGATGGCTGGGTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: YSPVISSSSVWLRPLMAGCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...CCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACGGGCGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR GCA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAAGAGATGTTCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: GAGVGWGELRGDRACAPQRDVLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGAACATCTCT...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595073.5
3UTR-3UTR CCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp CTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LVCCCPETPSRHRAAGLFCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...GAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR TCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGATGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp GAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCCCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: EACWPLRFHTSIQRNTELPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...GAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCCAGCCCCTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: LQSRRQAQLWKNSPVPSPCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...GGGGCTGGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGACGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp TCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCCAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: SGSGVWEPSKHSSEQTSGQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...GCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp AACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGTTCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: NSEETVLVHLKEVLTGGGVLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGAAC...CCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595073.5
3UTR-3UTR CCA 90 bp GAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCCGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 2 (lower is better)
Translates to: EACWPLRFHTSIQRNTELRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...GAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp TCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: SGSGVWEPSKHSSEQTSGPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...GCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGACCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: TLSRGGSVCSMEAFREACRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: STLRAEWMASLRLKTSTYGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...ATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp GCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: ALVSGNLLSILQSRRQAQPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...CTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp AACACAGAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: NTELSTLRAEWMASLRLKCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...CTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp TCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: SGSGVWEPSKHSSEQTSGRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...GCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp AGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: STLRAEWMASLRLKTSTYGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...ATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GGGGHLALVSGNLLSILQGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: RPAGPSGSTPLFRETQNSGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...TGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGAGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: GWPASVSRLLPISETSLRGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...TCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR TCA 90 bp GGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: GWPASVSRLLPISETSLRCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...TCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: ACWPLRFHTSIQRNTELSCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...GCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp AGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: RPAGPSGSTPLFRETQNSGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...TGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp ATTAAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTC +
Preference number: 2 (lower is better)
Translates to: IKLFPEVAPFAPWRPSERTLRAE*MASLRL
Trigger: GAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGT...CCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCATGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: PAGPSGSTPLFRETQNSACHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...TGCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTCAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: LLSILQSRRQAQLWKNSPQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...AGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRTQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 2 (lower is better)
Translates to: ELVGAGVGWGELRGDRACSGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...ACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp TGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: WMASLRLKTSTYLRNLLEHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...CTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: EWMASLRLKTSTYLRNLLGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...AAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR CAA 90 bp ACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTaGCAGAATAGAGATGTTCTGAGGAAGGAAGGAGCCAGAATTAAA +
Preference number: 2 (lower is better)
Translates to: TTPAGMGVPWHGRGV*QNRDVLRKEGARIK
Trigger: TTTAATTCTGGCTCCTTCCTTCCTCAGAACATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR CAA 90 bp GGGTACAAAAATATTCCATTAAACTCTTTCCCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: GYKNIPLNSFPRWLR*LHGGLQRGLLAPQV
Trigger: AACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAATGGAATATTTTTGTACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: EWMASLRLKTSTYLRNLLHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...AAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGACGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: LRLKTSTYLRNLLEIPRRRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...TCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp CTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCGATGTTCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 2 (lower is better)
Translates to: LVSGNLLSILQSRRQAQLDVLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGAACATC...GAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595073.5
3UTR-3UTR GCA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTATGGCAGAGGGGTCTTaGAGAATAGAGATGTTCTTG +
Preference number: 2 (lower is better)
Translates to: KAELVGAGVGWGELRGDRMAEGS*RIEMFL
Trigger: CAAGAACATCTCTATTCTGCAAGACCCCTCTGCCAT...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595073.5
3UTR-3UTR CCA 90 bp AACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 2 (lower is better)
Translates to: NLLSILQSRRQAQLWKNSRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...GGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: EWMASLRLKTSTYLRNLLRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...AAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGAAAGTGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: VSRLLPISETSLRYQGESGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...ACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTATAGAGATGTTCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSAIEMFR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGAACATCTCTAT...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600654.5
3UTR-3UTR CCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 2 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTSGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CCA 90 bp GTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGAAAGTGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: VSRLLPISETSLRYQGESGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...ACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR GCA 90 bp GTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGAAAGTCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: VSRLLPISETSLRYQGESHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...ACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp GCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCATCTCCGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: ALRPPQGTGQQGYSPVISVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...GGAGATGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR CCA 72 bp CAGGGCTATTCGCCCGTCATCTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCTGGGGAGCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: QGYSPVISSSSV*LRPLMAGEPGW
Trigger: CCAGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACGGGCGAATAGCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR TCA 72 bp CAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCGGGCAGCAGGGCTATT +
Preference number: 3 (lower is better)
Translates to: QGYPLPPCMLLP*DPLKAPGSRAI
Trigger: AATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR GCA 72 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAG +
Preference number: 3 (lower is better)
Translates to: LCPAPRLQLEWA*PGMAEGSCRIE
Trigger: CTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp CACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: HLVCCCPETPSRHRAAGLLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...TAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
3UTR-3UTR CAA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: CSMEAFREACWPLRFHTSQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 72 bp GACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCT +
Preference number: 3 (lower is better)
Translates to: DRACAPQGGPDR*WGTSGSGVWEP
Trigger: AGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp CTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: LFPEVAPFAPWRPSERPAQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...AGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR GCA 72 bp GAGCCCTGGATGACAGAACAAGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGCCCTGAGACCCCCTCA +
Preference number: 3 (lower is better)
Translates to: EPWMTEQGRVTR*HLVCCCPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 72 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTGCAGAATAGAGATGTT +
Preference number: 3 (lower is better)
Translates to: PSPTTPAGMGVP*HGRGVLQNRDV
Trigger: AACATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 72 bp CGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCT +
Preference number: 3 (lower is better)
Translates to: RACAPQGGPDRW*GTSGSGVWEPS
Trigger: AGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp GAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTTTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: ELVGAGVGWGELRGDRACLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...ACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp CGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGCATGGCAGAGGGGTCTaGCAGAATAGAGATGTTCCG +
Preference number: 3 (lower is better)
Translates to: RGWAGVNSEETVLVHLKEHGRGV*QNRDVP
Trigger: CGGAACATCTCTATTCTGCAAGACCCCTCTGCCATG...CTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600654.5
3UTR GCA 72 bp TGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: CRIEMFRCHLVC*CPETPSRHRAA
Trigger: TGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600654.5
3UTR CCA 72 bp GCAGGAAAAGCAGAATTAGTGGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCT +
Preference number: 3 (lower is better)
Translates to: AGKAELVGAGVG*GELRGDRACAP
Trigger: AGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR GCA 72 bp CTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTaGAGAATAGAGATGTTCCGCTGCCACCTTGTATGC +
Preference number: 3 (lower is better)
Translates to: LEWACPGMAEGS*RIEMFRCHLVC
Trigger: GCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600654.5
3UTR-3UTR CAA 90 bp GGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCTGTTCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: GGGHLALVSGNLLSILQSCSAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACA...GCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600654.5
3UTR GCA 72 bp CTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTaGAGAATAGAGATGTTCTTGTATGCTGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: LEWACPGMAEGS*RIEMFLYAAAL
Trigger: CAGGGCAGCAGCATACAAGAACATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595073.5
3UTR CCA 72 bp CCTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCA +
Preference number: 3 (lower is better)
Translates to: PDRWWGTSGSGV*EPSKHSSEQTS
Trigger: TGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp GGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: GWPASVSRLLPISETSLRLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...TCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp GAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTTTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: EWMASLRLKTSTYLRNLLLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...AAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGTTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 72 bp GAAACACAGAACTCAGCACGCTCAGGGCTGAATGGATaGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCA +
Preference number: 3 (lower is better)
Translates to: ETQNSARSGLNG*PASVSRLLPIS
Trigger: TGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR CCA 72 bp CAGAGAAACACAGAACTCAGCACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTCAAGACTTCTACCTAT +
Preference number: 3 (lower is better)
Translates to: QRNTELSTLRAE*MASLRLKTSTY
Trigger: ATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTTTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR-3UTR CAA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAGAATAGAGATGTTCTaGTATGCTGCTGCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRRIEMF*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGAACATCTCTATTCT...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595073.5
3UTR CCA 72 bp GGGTACAAAAATATTCCATTAAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: GYKNIPLNSFPR*LRLLHGGLQRG
Trigger: GCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAATGGAATATTTTTGTACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000602094.5
3UTR TCA 72 bp CCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTaGGATACCAAGGAGAAAGTATTTGATACTTTTACG +
Preference number: 3 (lower is better)
Translates to: PSQDFYLSQKPP*DTKEKVFDTFT
Trigger: CGTAAAAGTATCAAATACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCATCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PHDSSWNGRALAWQRGLASGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...TGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCATCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RCHLVCCCPETPSRHRAASGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...TGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGTCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCCACATCTGGCGGCCTTaGTCGCGCTTCCGGGATGGC +
Preference number: 4 (lower is better)
Translates to: APRLQLEWACPGMAEGSCHIWRP*SRFRDG
Trigger: GCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTG...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR CCA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: APRLQLEWACPGMAEGSCAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCATCTCCGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: ALRPPQGTGQQGYSPVISAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...GGAGATGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: APRLQLEWACPGMAEGSCPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp ATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGCAGCACGCTCAGGGCTaGATGGATGGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: IPLCPAPRLQLEWACPGMQHAQG*MDGQPP
Trigger: CGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTG...CATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: CAQPHDSSWNGRALAWQRRSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...CCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAACCACGCACCGATCCTaGGAGCGCGCGTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSTTHRS*ERAWRG
Trigger: TCCCCGCCACGCGCGCTCGCAGGATCGGTGCGTGGT...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: APRLQLEWACPGMAEGSCEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: PHDSSWNGRALAWQRGLAAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...TGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: CAQPHDSSWNGRALAWQRGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...CCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VGAGVGWGELRGDRACAPPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...AGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QPHDSSWNGRALAWQRGLPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...AAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGCTCGCGCTTCCGGGATaGCGCCCGCGCCGGCGAAAC +
Preference number: 4 (lower is better)
Translates to: GGLQRGLLAPQVPHLYSELALPG*RPRRRN
Trigger: GTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAG...CTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR TCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGCCTCTGGGATATGGCTaGAGGCCTCTGGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQPLGYG*RPLGAA
Trigger: GGCAGCACCCAGAGGCCTTCAGCCATATCCCAGAGG...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCATGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: PHDSSWNGRALAWQRGLACMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...TGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGCAGCACGCTCAGGGCTaGATGGATGGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RGWAGVNSEETVLVHLKEQHAQG*MDGQPP
Trigger: CGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTG...CTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQRSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LCPAPRLQLEWACPGMAEGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...CTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGCTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LCPAPRLQLEWACPGMAELRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...CTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTCGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QPHDSSWNGRALAWQRGLRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...AAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: IPLCPAPRLQLEWACPGMGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...CATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: NSPVPSPTTPAGMGVPWHGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...ATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LRGDRACAPQGGPDRWWGGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...CCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: CAQPHDSSWNGRALAWQRTLRAE*MASLRL
Trigger: GAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGT...CCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
3UTR CAA 72 bp CCCGTCATCTCCTCGTCATCTGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGCTGGACATGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PVISSSSVWLRP*MAGEPGWTWDR
Trigger: CCTGTCCCATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR TCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: HLVCCCPETPSRHRAAGLCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...TAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR TCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCACATCTGGCGGCCTTaGTCGCGCTTCCGGGATGGC +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGHIWRP*SRFRDG
Trigger: GCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTG...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR GCA 90 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LCPAPRLQLEWACPGMAEKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...CTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCACTGAAGGCCTCTGGGTaGTGCCTGGCCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PHDSSWNGRALAWQRGLALKASG*CLASFP
Trigger: AGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAG...TGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LCPAPRLQLEWACPGMAECHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...CTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: CAQPHDSSWNGRALAWQRTRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...CCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QPHDSSWNGRALAWQRGLGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...AAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LCPAPRLQLEWACPGMAEVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...CTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RGWAGVNSEETVLVHLKEGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...CTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRGDRACAPQGGPDRWWGGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...CCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGTLRAE*MASLRL
Trigger: GAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGT...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCTCCTGCGAGCGCGCGTaGCGGGGACGTACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCSCERA*RGRTLE
Trigger: CTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGA...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCACGGCACCTGCACATCTaGCGGCCTTGCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSRHLHI*RPCSRF
Trigger: GAAGCGCGAGCAAGGCCGCCAGATGTGCAGGTGCCG...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS-3UTR TCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCACCTCTGGGATATGGCTaGAGGCCTCTGGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSPLGYG*RPLGAA
Trigger: GGCAGCACCCAGAGGCCTTCAGCCATATCCCAGAGG...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCCAGCCCCTCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LQSRRQAQLWKNSPVPSPSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...GGGGCTGGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCTCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: HDSSWNGRALAWQRGLAECMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: CSMEAFREACWPLRFHTSCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAACCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HDSSWNGRALAWQRGLAEPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTACCTCAAGGAGGTCCTaGCCGGTGGTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGTSRRS*PVVGDI
Trigger: GATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGT...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGCAGCACGCTCAGGGCTaGATGGATGGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLQHAQG*MDGQPP
Trigger: CGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTG...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGGAGGCTCAGGGACACTaGGAAACTGGGCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGEAQGH*ETGPLS
Trigger: TGACAGTGGCCCAGTTTCTCAGTGTCCCTGAGCCTC...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCCACATCTGGCGGCCTTaGTCGCGCTTCCGGGATGGC +
Preference number: 4 (lower is better)
Translates to: TLSRGGSVCSMEAFREACHIWRP*SRFRDG
Trigger: GCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTG...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR GCA 90 bp AATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATTTTCTCCTCCTCCGCTaGCTGCACATCTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: NSPVPSPTTPAGMGVPWHFLLLR*LHIWRP
Trigger: AGGCCGCCAGATGTGCAGGCAGCGGAGGAGGAGAAA...ATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
CDS-3UTR GCA 90 bp GTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VGAGVGWGELRGDRACAPQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...AGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGCAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGTAGCGGCGGCACCTaGACATCTGGCGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KAGLPAATLYAAALRPPQGSGGT*TSGGLA
Trigger: AGCAAGGCCGCCAGATGTGCAGGTGCCGCCGCTACC...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS-3UTR GCA 90 bp CAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCTTTCTCCTCCTCCGCTaGCCCAAACTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: QNKAGLPAATLYAAALRPFLLLR*PKLGPG
Trigger: GCCGGGGCCGAGTTTGGGGCAGCGGAGGAGGAGAAA...GGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS-3UTR CCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCCGCTGCCTGCACATCTaGCGGCCTTGCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: TLSRGGSVCSMEAFREACRCLHI*RPCSRF
Trigger: GAAGCGCGAGCAAGGCCGCCAGATGTGCAGGCAGCG...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222307.9
ENST00000601630.5
CDS-3UTR CCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTCCAGCATGTTCTTCTaGGCCAGGATGATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVSSMFF*ARMMAL
Trigger: CAACGCCATCATCCTGGCCCAGAAGAACATGCTGGA...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGTRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCATACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: CCPETPSRHRAAGLFARHTRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...ATGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CCA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGCCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LRGDRACAPQGGPDRWWGPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...CCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCTGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: APRLQLEWACPGMAEGSCWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RGWAGVNSEETVLVHLKEGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...CTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NSPVPSPTTPAGMGVPWHGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...ATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCATGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PHDSSWNGRALAWQRGLAWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...TGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGTGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RCHLVCCCPETPSRHRAAVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...TGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCATCTCCTCGGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LRPPQGTGQQGYSPVISSVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...CGAGGAGATGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: CSMEAFREACWPLRFHTSEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: QPHDSSWNGRALAWQRGLSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...AAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCACGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CSMEAFREACWPLRFHTSGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTCCTCTGGGATATGGCTaGAGGCCTCTGGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELVGAGVGWGELRGDRACPLGYG*RPLGAA
Trigger: GGCAGCACCCAGAGGCCTTCAGCCATATCCCAGAGG...ACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: NKAGLPAATLYAAALRPPCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NKAGLPAATLYAAALRPPPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACACCTCAAGGAGGTCCTaGCCGGTGGTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDTSRRS*PVVGDI
Trigger: GATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGT...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp AACACAGAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: NTELSTLRAEWMASLRLKGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...CTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTCAGCACGCTCAGGGCTaGATGGATGGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGQHAQG*MDGQPP
Trigger: CGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTG...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: QNKAGLPAATLYAAALRPRSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...GGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: TLYAAALRPPQGTGQQGYKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...ATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR GCA 90 bp CGTCATCTCCTCGTCATCTGTCTGGCTGCGGCCGTTGATGGCTGGGGAGCCAGGAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: RHLLVICLAAAVDGWGARRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...CCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR GCA 90 bp AATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: NSPVPSPTTPAGMGVPWHRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...ATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RGWAGVNSEETVLVHLKEKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...CTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTCTGAAGGCCTCTGGGTaGTGCCTGGCCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CSMEAFREACWPLRFHTSLKASG*CLASFP
Trigger: AGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAG...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTACAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: HLVCCCPETPSRHRAAGLQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...TAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR GCA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAACGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: KAGLPAATLYAAALRPPQRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: QNKAGLPAATLYAAALRPRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...GGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGACAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TPAGMGVPWHGRGVLQNRQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...TCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTCAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VGAGVGWGELRGDRACAPTQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...AGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGCGAGGTGGCTCCGTTTaGTCCATGGAGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VRGWAGVNSEETVLVHLKRGGSV*SMEAFR
Trigger: TCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCG...CTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTCCTATGACATGCCATaGAGAGACACCCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSPTTPAGMGVPWHGRGVSYDMP*RDTQSP
Trigger: TGGAGACTGGGTGTCTCTGCATGGCATGTCATAGGA...GACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTCCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: CSMEAFREACWPLRFHTSPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTTGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VGAGVGWGELRGDRACAPWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...AGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGTGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: TLYAAALRPPQGTGQQGYGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...ATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCCTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EQGRVTRCHLVCCCPETPLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGACTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SEETVLVHLKEVLTGGGGLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...TCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCATGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RCHLVCCCPETPSRHRAACSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...TGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TATTCGCCCGTCATCTCCTCGTCATCTGTCTGGCTGCGGCCGTTGATGGCTGGGGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: YSPVISSSSVWLRPLMAGEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...CCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACGGGCGAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CCA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: NKAGLPAATLYAAALRPPEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCCAGCCCCGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: LQSRRQAQLWKNSPVPSPAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...GGGGCTGGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: NSEETVLVHLKEVLTGGGGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...CCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: NKAGLPAATLYAAALRPPGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QNKAGLPAATLYAAALRPGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...GGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAACGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: KAGLPAATLYAAALRPPQRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: QPHDSSWNGRALAWQRGLRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...AAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGTLRAE*MASLRL
Trigger: GAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGT...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSTLRAE*MASLRL
Trigger: GAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGT...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCCTCCTGCACATCTaGCGGCCTTGCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLTLLHI*RPCSRF
Trigger: GAAGCGCGAGCAAGGCCGCCAGATGTGCAGGAGGGT...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540691.5
CDS-3UTR TCA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTCCTCTGGGATATGGCTaGAGGCCTCTGGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KAELVGAGVGWGELRGDRPLGYG*RPLGAA
Trigger: GGCAGCACCCAGAGGCCTTCAGCCATATCCCAGAGG...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGATCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGTCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGGGHLALVSGNLLSILQSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTCCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATCCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCACCTCAAGGAGGTCCTaGCCGGTGGTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCTSRRS*PVVGDI
Trigger: GATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGT...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATCATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: NSPVPSPTTPAGMGVPWHHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...ATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDRSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LFPEVAPFAPWRPSERPAKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...AGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAAAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: HDSSWNGRALAWQRGLAERVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGCTGAAGGCCTCTGGGTaGTGCCTGGCCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: NSEETVLVHLKEVLTGGGLKASG*CLASFP
Trigger: AGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAG...CCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: EQGRVTRCHLVCCCPETPHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TLYAAALRPPQGTGQQGYHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...ATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR GCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NKAGLPAATLYAAALRPPGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AACACAGAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGCAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NTELSTLRAEWMASLRLKQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...CTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCAACCACGCACCGATCCTaGGAGCGCGCGTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PAGPSGSTPLFRETQNSATTHRS*ERAWRG
Trigger: TCCCCGCCACGCGCGCTCGCAGGATCGGTGCGTGGT...TGCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp CACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAAACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: HDSSWNGRALAWQRGLAETRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAACCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: KAGLPAATLYAAALRPPQPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: QNKAGLPAATLYAAALRPPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...GGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGCAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRGDRACAPQGGPDRWWGQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...CCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGCAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGWAGVNSEETVLVHLKEQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...CTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NSPVPSPTTPAGMGVPWHCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...ATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTCGTCATCTGTCTGGCTGCGGCCGTTGATGGCTGGGGAGCCAGGCTGGACATGTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVICLAAAVDGWGARLDMCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPEAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: TLYAAALRPPQGTGQQGYSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...ATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TPAGMGVPWHGRGVLQNRGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...TCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGAATGGGCGTGCCCTaGCATGGCAGAGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGGMGVP*HGRGVL
Trigger: CAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCC...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCCGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LDDRTRQGYPLPPCMLLPRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...GGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAACGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GAGVGWGELRGDRACAPQRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAGCTCCGTTTGCTCCATaGAGGCCTTCAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSAPFAP*RPSERP
Trigger: AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGC...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGNSFPR*LRLLHG
Trigger: TCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTT...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGCCTAGGAGCCCTGGGTaGCAGAACGGGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPEPRSPG*QNGAAK
Trigger: CTTTGCTGCCCCGTTCTGTCACCCAGGGCTCCTAGG...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTACCTCAAGGAGGTCCTaGCCGGTGGTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: LTGGGGHLALVSGNLLSITSRRS*PVVGDI
Trigger: GATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGT...AATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGCAATCCAGATGGTTCTaGGGTTCCCAGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQQSRWF*GSQFCW
Trigger: CCAGCAAAACTGGGAACCTCAGAACCATCTGGATTG...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540691.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAAGGTGGGCAGACTGCTTaGGGTCAGGAGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: HDSSWNGRALAWQRGLAEGGQTA*GQEFKT
Trigger: GGTTTTGAACTCCTGACCTCAAGCAGTCTGCCCACC...TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCACATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: TPAGMGVPWHGRGVLQNRKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...TCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: NSEETVLVHLKEVLTGGGRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...CCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCTGAAGGCCTCTGGGTaGTGCCTGGCCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETLKASG*CLASFP
Trigger: AGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAG...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LFPEVAPFAPWRPSERPAQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...AGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PDRWWGTSGSGVWEPSKHGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...ATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCACAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGCGAGGTGGCTCCGTTTaGTCCATGGAGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGLQRGLLAPQVPHLYSERGGSV*SMEAFR
Trigger: TCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCG...CTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGAGGTGGCTCCGTTTaGTCCATGGAGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDRGGSV*SMEAFR
Trigger: TCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCG...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATCCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTCAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSMEAFREACWPLRFHTSQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGATGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SEETVLVHLKEVLTGGGGWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...TCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LDDRTRQGYPLPPCMLLPGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...GGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTTGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: NKAGLPAATLYAAALRPPWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: DRWWGTSGSGVWEPSKHSEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAATCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: KAGLPAATLYAAALRPPQSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: APRLQLEWACPGMAEGSCSGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: CAQPHDSSWNGRALAWQRSGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...CCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTGGGGHLALVSGNLLSIGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...AATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCCCTGAGGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GSCRIEMFRCHLVCCCPEGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR CCA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GGGGHLALVSGNLLSILQGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: EACWPLRFHTSIQRNTELGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...GAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGATCAGGGCTGAATGGATaGCCAGCCTCCGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SEETVLVHLKEVLTGGGGSGLNG*PASVSR
Trigger: TCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGA...TCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDTLRAE*MASLRL
Trigger: GAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGT...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCGCTCCGTTTGCTCCATaGAGGCCTTCAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TLSRGGSVCSMEAFREACAPFAP*RPSERP
Trigger: AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGC...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGGCTCCGTTTGCTCCATaGAGGCCTTCAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GGLQRGLLAPQVPHLYSEAPFAP*RPSERP
Trigger: AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGC...CTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCTCGCGCTTCCGGGATaGCGCCCGCGCCGGCGAAAC +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVLALPG*RPRRRN
Trigger: GTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAG...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGTTCCCAGTTTTGCTaGCACACAGATGACCGTAAT +
Preference number: 4 (lower is better)
Translates to: LCPAPRLQLEWACPGMAEGSQFC*HTDDRN
Trigger: ATTACGGTCATCTGTGTGCCAGCAAAACTGGGAACC...CTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540691.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGCCTCTGGGATATGGCTaGAGGCCTCTGGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GGGGHLALVSGNLLSILQPLGYG*RPLGAA
Trigger: GGCAGCACCCAGAGGCCTTCAGCCATATCCCAGAGG...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: AEWMASLRLKTSTYLRNLGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...GAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCAGCACGCTCAGGGCTaGATGGATGGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALVSGNLLSILQSRRQAQQHAQG*MDGQPP
Trigger: CGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTG...CTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGAGGCTGGTGGATCACCTaGGGTCATGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: SEETVLVHLKEVLTGGGGGWWIT*GHEFKT
Trigger: AGTCTTGAACTCATGACCTCAGGTGATCCACCAGCC...TCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGATCCTCCTCCGCTGCCTaGACATCTGGCGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRSSSAA*TSGGLA
Trigger: AGCAAGGCCGCCAGATGTGCAGGCAGCGGAGGAGGA...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222307.9
ENST00000595073.5
ENST00000601630.5
CDS-3UTR GCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPEKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: LDDRTRQGYPLPPCMLLPRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...GGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGCTGAAGGCCTCTGGGTaGTGCCTGGCCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPELKASG*CLASFP
Trigger: AGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAG...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAATTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GAGVGWGELRGDRACAPQFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGTTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VRGWAGVNSEETVLVHLKFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...CTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GCCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ALDDRTRQGYPLPPCMLLHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...CAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGCAGAGGGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: GRGVLQNRDVPLPPCMLLRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...CAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCCCTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR GCA 90 bp CTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LFPEVAPFAPWRPSERPATQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...AGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QNKAGLPAATLYAAALRPTQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...GGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATTAAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCGCTGCCTGCACATCTaGCGGCCTTGCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: IKLFPEVAPFAPWRPSERRCLHI*RPCSRF
Trigger: GAAGCGCGAGCAAGGCCGCCAGATGTGCAGGCAGCG...CCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222307.9
ENST00000601630.5
CDS-3UTR CCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCTRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACTGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCCAGCCCCTGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LQSRRQAQLWKNSPVPSPWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...GGGGCTGGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: PDRWWGTSGSGVWEPSKHSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...ATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ERPAGPSGSTPLFRETQNGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...GTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCCGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: ACWPLRFHTSIQRNTELSRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...GCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCACGACTCCAGCTGGAATaGGCGTGCCCTGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSRLQLE*ACPGMA
Trigger: TGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCG...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCCCCCACGACTCCAGCTaGAATGGGCGTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LVSGNLLSILQSRRQAQLPHDSS*NGRALA
Trigger: TGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG...GAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EACWPLRFHTSIQRNTELGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...GAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ACWPLRFHTSIQRNTELSGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...GCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTCAGGGCTGAATGGATaGCCAGCCTCCGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TLSRGGSVCSMEAFREACSGLNG*PASVSR
Trigger: TCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGA...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGTCAGGGCTGAATGGATaGCCAGCCTCCGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: ELRGDRACAPQGGPDRWWSGLNG*PASVSR
Trigger: TCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGA...CCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: GVGWGELRGDRACAPQGGNSFPR*LRLLHG
Trigger: TCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTT...ACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCAGGCGGGGACGTACCCTaGAGCCGCTTGCGTGCGTTA +
Preference number: 4 (lower is better)
Translates to: PAGPSGSTPLFRETQNSAGGDVP*SRLRAL
Trigger: TAACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCC...TGCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp TGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTGTAGTCGCAGCTACTTaGATGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CSMEAFREACWPLRFHTSVVAAT*MAEAGE
Trigger: TTCTCCTGCCTCAGCCATCCAAGTAGCTGCGACTAC...AGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR TCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: GTSGSGVWEPSKHSSEQTCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...CGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGACCTCAAGGAGGTCCTaGCCGGTGGTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: GTSGSGVWEPSKHSSEQTTSRRS*PVVGDI
Trigger: GATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGT...CGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTACCTCAAGGAGGTCCTaGCCGGTGGTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTTSRRS*PVVGDI
Trigger: GATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGT...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp TCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCACCTCAAGGAGGTCCTaGCCGGTGGTGGGGGACATC +
Preference number: 4 (lower is better)
Translates to: SGSGVWEPSKHSSEQTSGTSRRS*PVVGDI
Trigger: GATGTCCCCCACCACCGGTCAGGACCTCCTTGAGGT...GCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGGGGGGTGGGCTGGGGTaGACTCAGAGGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVGGGLG*TQRRPC
Trigger: GCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCC...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCGAGGGGCTACAGCACTaGCCCTCCTGCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: LVSGNLLSILQSRRQAQLEGLQH*PSCTSG
Trigger: GCCAGATGTGCAGGAGGGTCAGTGCTGTAGCCCCTC...GAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540691.5
CDS-3UTR GCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTRSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GTSGSGVWEPSKHSSEQTRSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...CGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ELSTLRAEWMASLRLKTSKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...AGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCTTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPEVAPFAPWRPSERPAGFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...GCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: DRWWGTSGSGVWEPSKHSQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WMTEQGRVTRCHLVCCCPQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...AGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AACACAGAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: NTELSTLRAEWMASLRLKQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...CTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LTGGGGHLALVSGNLLSIHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...AATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LTGGGGHLALVSGNLLSICHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...AATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: WMTEQGRVTRCHLVCCCPCHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...AGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GHLALVSGNLLSILQSRRQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...ACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGTQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTCGAGGTGGCTCCGTTTaGTCCATGGAGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPRGGSV*SMEAFR
Trigger: TCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCG...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACAGAGATGTTCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDRDVLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGAACATCTCT...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595073.5
CDS-3UTR CCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPETRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCACCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AACACAGAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NTELSTLRAEWMASLRLKDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...CTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTCTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTCAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCCAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LDDRTRQGYPLPPCMLLPQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...GGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGTGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPEWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGCTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GGGGHLALVSGNLLSILQLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCACTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KAELVGAGVGWGELRGDRCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSAAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATTAAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: IKLFPEVAPFAPWRPSERGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...CCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCTCAGGGCTGAATGGATaGCCAGCCTCCGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETSGLNG*PASVSR
Trigger: TCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGA...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCTCAGGGCTGAATGGATaGCCAGCCTCCGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCSGLNG*PASVSR
Trigger: TCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGA...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGACGCTCAGGGCTGAATaGATGGCCAGCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQTLRAE*MASLRL
Trigger: GAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGT...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDNSFPR*LRLLHG
Trigger: TCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTT...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: KAGLPAATLYAAALRPPQNSFPR*LRLLHG
Trigger: TCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTT...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: TLSRGGSVCSMEAFREACNSFPR*LRLLHG
Trigger: TCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTT...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGGGCGGGGACGTACCCTaGAGCCGCTTGCGTGCGTTA +
Preference number: 4 (lower is better)
Translates to: WMASLRLKTSTYLRNLLEGGDVP*SRLRAL
Trigger: TAACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCC...CTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCACTGCAGTGCTGTCTGTaGCAACTGAAACCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSLQCCL*QLKPKV
Trigger: CACCTTTGGTTTCAGTTGCCACAGACAGCACTGCAG...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599319.5
CDS-3UTR TCA 90 bp ATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGTCTCAGAAACCTCCTTaGGATACCAAGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: IPLCPAPRLQLEWACPGMSQKPP*DTKEKV
Trigger: TACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGA...CATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGTCTCAGAAACCTCCTTaGGATACCAAGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: AATLYAAALRPPQGTGQQSQKPP*DTKEKV
Trigger: TACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGA...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGCAATCCAGATGGTTCTaGGGTTCCCAGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELRGDRACAPQGGPDRWWQSRWF*GSQFCW
Trigger: CCAGCAAAACTGGGAACCTCAGAACCATCTGGATTG...CCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540691.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCACATCTGGCGGCCTTaGTCGCGCTTCCGGGATGGC +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVHIWRP*SRFRDG
Trigger: GCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTG...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR GCA 90 bp AGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCATTTCTCCTCCTCCGCTaGCTGCACATCTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RPAGPSGSTPLFRETQNSFLLLR*LHIWRP
Trigger: AGGCCGCCAGATGTGCAGGCAGCGGAGGAGGAGAAA...TGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222307.9
ENST00000595073.5
ENST00000601630.5
CDS-3UTR GCA 90 bp CTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTTTCTCCTCCTCCGCTaGCTGCACATCTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LVSGNLLSILQSRRQAQLFLLLR*LHIWRP
Trigger: AGGCCGCCAGATGTGCAGGCAGCGGAGGAGGAGAAA...GAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
CDS-3UTR GCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSARSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LVSGNLLSILQSRRQAQLKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...GAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGACTGAAGGCCTCTGGGTaGTGCCTGGCCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRLKASG*CLASFP
Trigger: AGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAG...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAATTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KAGLPAATLYAAALRPPQFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAGGCAGGGTTACCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRGRVTR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCC...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTCTGGAGCCGCTTGCGTaGGTTAAGTCACGACAGGAA +
Preference number: 4 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPLEPLA*VKSRQE
Trigger: TTCCTGTCGTGACTTAACGCACGCAAGCGGCTCCAG...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp GGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GGGHLALVSGNLLSILQSDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...GCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ERPAGPSGSTPLFRETQNDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...GTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCCCTGAGGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSCRIEMFRCHLVCCCPEDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR CCA 90 bp CCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTCAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PWHGRGVLQNRDVPLPPCQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...ACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR CCA 90 bp GGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GTSGSGVWEPSKHSSEQTGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...CGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGTGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCACTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RPAGPSGSTPLFRETQNSLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...TGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGGHLALVSGNLLSILQSVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...GCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCCCTGAGGTTCTGAGGTGGCAATaGTGGTCGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSCRIEMFRCHLVCCCPEVLRWQ*WSWCWV
Trigger: CACCCAGCACCACGACCACCATTGCCACCTCAGAAC...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR CCA 90 bp TGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WMTEQGRVTRCHLVCCCPCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...AGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPECSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGGAGCCAGGCTGGACATaGGACAGGTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: WMASLRLKTSTYLRNLLEEPGWT*DRSSKP
Trigger: CGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTC...CTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGGCGGCCGTTGATGGCTaGGGAGCCAGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVAAVDG*GARLDM
Trigger: CATGTCCAGCCTGGCTCCCCAGCCATCAACGGCCGC...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCATCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: WMASLRLKTSTYLRNLLEGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...CTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GHLALVSGNLLSILQSRRGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...ACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AEWMASLRLKTSTYLRNLGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...GAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCGGAGGTCCTGACCGGTaGTGGGGGACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AEWMASLRLKTSTYLRNLGGPDR*WGTSGS
Trigger: AGAGCCAGATGTCCCCCACCACCGGTCAGGACCTCC...GAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCTCCTGCGAGCGCGCGTaGCGGGGACGTACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NLLSILQSRRQAQLWKNSSCERA*RGRTLE
Trigger: CTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGA...GGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp GACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTGGGACACTGAGAAACTaGGCCACTGTCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: DRWWGTSGSGVWEPSKHSGTLRN*ATVTQP
Trigger: TGGCTGTGTGACAGTGGCCCAGTTTCTCAGTGTCCC...AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR TCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPCMLLP*DPLKAP
Trigger: CGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACA...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTCAAGGAGAAAGTATTTaGTACTTTTACGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QPHDSSWNGRALAWQRGLQGESI*YFYGAR
Trigger: CCTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTG...AAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp ATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACAGCACGCTCAGGGCTaGATGGATGGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: MASLRLKTSTYLRNLLEIQHAQG*MDGQPP
Trigger: CGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTG...TATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCCCTGAGCATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GSCRIEMFRCHLVCCCPEHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR GCA 90 bp AGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: STLRAEWMASLRLKTSTYHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...ATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCACATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCAAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PAGPSGSTPLFRETQNSAKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...TGCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LDDRTRQGYPLPPCMLLPFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...GGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCACAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RPAGPSGSTPLFRETQNSQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...TGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ALVSGNLLSILQSRRQAQHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...CTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTCGCTGCCACCTTGTATaGTGCTGCCCTGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: EWMASLRLKTSTYLRNLLRCHLV*CCPETP
Trigger: GGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG...AAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACAGCTGGAATGGGCGTaGCCTGGCATGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: MASLRLKTSTYLRNLLEIQLEWA*PGMAEG
Trigger: CCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTG...TATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGCAGAGGGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRGVLQNRDVPLPPCMLLTQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...CAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCCCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR GCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSTQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGCTGGGAGGCAGAGGTTaGAATGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: GGGGHLALVSGNLLSILQLGGRG*NEPRSC
Trigger: GCATGATCTCGGCTCATTGCAACCTCTGCCTCCCAG...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGACCGAGGTGGGCAGACTaGTTGAGGTCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRPRWAD*LRSGVQ
Trigger: TTGAACTCCTGACCTCAAGCAGTCTGCCCACCTCGG...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR CCA 90 bp TGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTTCCAGCATGTTCTTCTaGGCCAGGATGATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: WMTEQGRVTRCHLVCCCPSSMFF*ARMMAL
Trigger: CAACGCCATCATCCTGGCCCAGAAGAACATGCTGGA...AGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSAPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTSGSGVWEPSKHSSEQTDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...CGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RPAGPSGSTPLFRETQNSDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...TGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCATGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCATGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPAGPSGSTPLFRETQNSWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...TGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATTAAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGTGGTGGTCGTGGTGCTaGGTGGGATGGGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: IKLFPEVAPFAPWRPSERWWSWC*VGWGLH
Trigger: ATGAAGACCCCATCCCACCCAGCACCACGACCACCA...CCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: STLRAEWMASLRLKTSTYRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...ATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGGGTCCTGACCGGTGGTaGGGGACATCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVGPDRW*GTSGSG
Trigger: ACCAGAGCCAGATGTCCCCCACCACCGGTCAGGACC...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTGCTCCGTTTGCTCCATaGAGGCCTTCAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTAPFAP*RPSERP
Trigger: AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGC...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGAACTCTTTCCCGAGGTaGCTCCGTTTGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPENSFPR*LRLLHG
Trigger: TCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTT...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCGGTTCCCAGTTTTGCTaGCACACAGATGACCGTAAT +
Preference number: 4 (lower is better)
Translates to: TLSRGGSVCSMEAFREACGSQFC*HTDDRN
Trigger: ATTACGGTCATCTGTGTGCCAGCAAAACTGGGAACC...GCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540691.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTTATAAAGAGGATACCTaGACCGGGTGCTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: KAELVGAGVGWGELRGDRYKEDT*TGCSCL
Trigger: CAGGCATGAGCACCCGGTCCAGGTATCCTCTTTATA...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR TCA 90 bp TTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCCAAGGAGAAAGTATTTaGTACTTTTACGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FPRWLRLLHGGLQRGLLAQGESI*YFYGAR
Trigger: CCTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTG...GGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTTTCTCCTCCTCCGCTaGCTGCACATCTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPFLLLR*LHIWRP
Trigger: AGGCCGCCAGATGTGCAGGCAGCGGAGGAGGAGAAA...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
CDS-3UTR GCA 90 bp CTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGACATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LRAEWMASLRLKTSTYLRHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...TCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ATTAAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: IKLFPEVAPFAPWRPSERHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...CCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp ATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: MASLRLKTSTYLRNLLEIRSLIC*RRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG...TATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVKRSLI*CRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTT...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: AEWMASLRLKTSTYLRNLRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...GAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGAAGGCCTCTGGGTGCTaGCTGGCCAGTTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: WMASLRLKTSTYLRNLLEKASGC*LASFPF
Trigger: GAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTT...CTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KHSSEQTSGSALEKFPCAQWWSW*WVGWGL
Trigger: AAGACCCCATCCCACCCAGCACCACGACCACCATTG...GGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCCACCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KHSSEQTSGSALEKFPCAHLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTG...GGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: WMASLRLKTSTYLRNLLECHLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA...CTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGATGGCAGAGGGGTCTTaGAGAATAGAGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLMAEGS*RIEMFL
Trigger: CAAGAACATCTCTATTCTGCAAGACCCCTCTGCCAT...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595073.5
CDS-3UTR CCA 90 bp AAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: KHSSEQTSGSALEKFPCATRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...GGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCTCTGGGTGCTGCCTaGCCAGTTTCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVPLGAA*PVSLSA
Trigger: CGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGG...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGGGTCGTGGTGCTGGGTaGGATGGGGTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVGRGAG*DGVFIL
Trigger: GAGGATGAAGACCCCATCCCACCCAGCACCACGACC...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCCTGAGGTGGCAATGGTaGTCGTGGTGCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPLRWQW*SWCWVG
Trigger: TCCCACCCAGCACCACGACCACCATTGCCACCTCAG...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGGGCGTGCCCTGGCATaGCAGAGGGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKHSSEQTSGSALEKFPCGRALA*QRGLAE
Trigger: TTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCC...ACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ATTAAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: IKLFPEVAPFAPWRPSERRQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...CCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETSGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGAGGTGCGGGGGTGGGCTaGGGTGAACTCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LRLKTSTYLRNLLEIPRRGAGVG*GELRGD
Trigger: GTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC...TCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTTCAGGGCTGAATGGATaGCCAGCCTCCGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTSGLNG*PASVSR
Trigger: TCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGA...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTGCTCCGTTTGCTCCATaGAGGCCTTCAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSAAPFAP*RPSERP
Trigger: AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGC...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTTGCAGAATAGAGATGTTCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCGCTCCGTTTGCTCCATaGAGGCCTTCAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SCRIEMFLYAAALRPPQGAPFAP*RPSERP
Trigger: AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGC...GCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGAACATCTCTATTCTGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595073.5
3UTR CAA 72 bp AATATTCCATTAAACTCTTTCCCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NIPLNSFPRWLR*LHGGLQRGLLA
Trigger: GGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTTAATGGAATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp ATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATAGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: MASLRLKTSTYLRNLLEIARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...TATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGCCCGTGCTCTGTTCTaGGGTGGCAATGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LLSILQSRRQAQLWKNSPARALF*GGNGGR
Trigger: ACGACCACCATTGCCACCTCAGAACAGAGCACGGGC...AGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGAAAGTTCTGGCTGCGGCCGTTaGTGGCTGGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSRLLPISETSLRYQGESSGCGR*WLGSQA
Trigger: AGCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGA...ACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp TGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAACTGAAGGCCTCTGGGTaGTGCCTGGCCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: WEPSKHSSEQTSGSALEKLKASG*CLASFP
Trigger: AGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAG...TTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCTTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GGGHLALVSGNLLSILQSFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...GCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTCGAGGTGGCTCCGTTTaGTCCATGGAGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EWMASLRLKTSTYLRNLLRGGSV*SMEAFR
Trigger: TCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCG...AAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTACAGCAGCTGATTTCTaGCTGACTTCTGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: NKAGLPAATLYAAALRPPTAADF*LTSDVS
Trigger: AGAAACATCAGAAGTCAGGCAGAAATCAGCTGCTGT...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTGTTCTTGTATGCTGCTaGCCTGAGACCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSAVLVCC*PETPSR
Trigger: CCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGAAC...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595073.5
CDS-3UTR CCA 90 bp GCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AEWMASLRLKTSTYLRNLCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...GAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CATGGCAGAGGGGTCTTGCAGAATAGAGATGTTCTTGTATGCTGCTGCCCTGAGCGTCAGGCTCAGCTCTaGAAAAATTCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HGRGVLQNRDVLVCCCPERQAQL*KNSPVP
Trigger: GGGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACG...CTCAGGGCAGCAGCATACAAGAACATCTCTATTCTGCAAGACCCCTCTGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595073.5
CDS-3UTR CCA 90 bp GGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCGTAATCTCAGCACTTTaGGAAGCCAAGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGGHLALVSGNLLSILQSVISAL*EAKAGG
Trigger: TCCACCAGCCTTGGCTTCCCAAAGTGCTGAGATTAC...GCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR TCA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCAAGGAGAAAGTATTTaGTACTTTTACGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GWGELRGDRACAPQGGPDQGESI*YFYGAR
Trigger: CCTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTG...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCATAGAGATGTTCCGCTaGCACCTTGTATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVSGNLLSILQSRRQAQLIEMFR*HLVCCC
Trigger: GCAGCAGCATACAAGGTGGCAGCGGAACATCTCTAT...GAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR CCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTTCCAGCATGTTCTTCTaGGCCAGGATGATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSASSMFF*ARMMAL
Trigger: CAACGCCATCATCCTGGCCCAGAAGAACATGCTGGA...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAAACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: WEPSKHSSEQTSGSALEKTRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...TTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGATGCCTCTGGGATATaGCTGAAGGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LLSILQSRRQAQLWKNSPDASGI*LKASGC
Trigger: GCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATC...AGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCCAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGTGCTCTGTTCTGAGGTaGCAATGGTGGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVCSVLR*QWWSWC
Trigger: GCACCACGACCACCATTGCCACCTCAGAACAGAGCA...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTTCCTCGTCATCTGTCTaGCTGCGGCCGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: SKHSSEQTSGSALEKFPCSSSSV*LRPLMA
Trigger: AGCCATCAACGGCCGCAGCCAGACAGATGACGAGGA...ACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCCCTGAGTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: GSCRIEMFRCHLVCCCPESGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR CCA 90 bp AGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: STLRAEWMASLRLKTSTYSGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...ATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTCGCAGCTACTTGGATaGCTGAGGCAGGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPSQLLG*LRQENG
Trigger: GCCATTCTCCTGCCTCAGCCATCCAAGTAGCTGCGA...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR TCA 90 bp CCTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATCAAGGAGAAAGTATTTaGTACTTTTACGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PDRWWGTSGSGVWEPSKHQGESI*YFYGAR
Trigger: CCTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTG...ATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GCCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCAAGGAGAAAGTATTTaGTACTTTTACGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ALDDRTRQGYPLPPCMLLQGESI*YFYGAR
Trigger: CCTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTG...CAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp GAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCGTTATTGAACTCCTATaGCATGCCATGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: EACWPLRFHTSIQRNTELVIELL*HAMQRH
Trigger: GTGTCTCTGCATGGCATGTCATAGGAGTTCAATAAC...GAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp TCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTACTCAGAGGAGACCGTaGTTGTGCACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKHSSEQTSGSALEKFPCTQRRP*LCTSRR
Trigger: CCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGT...ACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGACGAGGTGGCTCCGTTTaGTCCATGGAGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LRLKTSTYLRNLLEIPRRRGGSV*SMEAFR
Trigger: TCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCG...TCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCGTGAATCTGAACAGGTaGACAATATCCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: EACWPLRFHTSIQRNTELVNLNR*TISSCD
Trigger: GTCACAGCTGGATATTGTGCACCTGTTCAGATTCAC...GAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp AAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCATGGCAGAGGGGTCTTaGAGAATAGAGATGTTCCGC +
Preference number: 4 (lower is better)
Translates to: KHSSEQTSGSALEKFPCAMAEGS*RIEMFR
Trigger: GCGGAACATCTCTATTCTGCAAGACCCCTCTGCCAT...GGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS-3UTR CCA 90 bp AACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: NLLSILQSRRQAQLWKNSTRVLV*CRKRSL
Trigger: GAGCGAACGCTTCCTGCACCACACGAGGACCCTAGT...GGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp GAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTTTGTGATCTGTATCTaGTCAGTGGTTTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: ERPAGPSGSTPLFRETQNFVICI*SVVCST
Trigger: GGTGCTGCAAACCACTGACCAGATACAGATCACAAA...GTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR TCA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGTCTCAGAAACCTCCTTaGGATACCAAGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: GGGGHLALVSGNLLSILQSQKPP*DTKEKV
Trigger: TACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGA...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GAATGGATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTTTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: EWMASLRLKTSTYLRNLLFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...AAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCATCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGACTGGAGCCGCTTGCGTaGGTTAAGTCACGACAGGAA +
Preference number: 4 (lower is better)
Translates to: LRLKTSTYLRNLLEIPRRLEPLA*VKSRQE
Trigger: TTCCTGTCGTGACTTAACGCACGCAAGCGGCTCCAG...TCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CCA 90 bp CTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGACAGGAAGGATGCCTCTaGGATATGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRLKTSTYLRNLLEIPRRQEGCL*DMAEGL
Trigger: GAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG...TCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCTGGTGCTGGGTGGGATaGGGTCTTCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NLLSILQSRRQAQLWKNSWCWVG*GLHPLP
Trigger: AGGAAGAGGATGAAGACCCCATCCCACCCAGCACCA...GGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTTCTGGCTCTGGTGTCTaGGAACCTTCTAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSASGSGV*EPSKHS
Trigger: AGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp TCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCTGTATCTGGTCAGTaGTTTGCAGCACCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SGSGVWEPSKHSSEQTSGSVSGQ*FAAPSR
Trigger: TCTAGAAGGTGCTGCAAACCACTGACCAGATACAGA...GCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR TCA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGACAAGGAGAAAGTATTTaGTACTTTTACGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRQGESI*YFYGAR
Trigger: CCTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTG...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp GTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGAAAGTAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: VSRLLPISETSLRYQGESRVLVW*RKRSLI
Trigger: GATGAGCGAACGCTTCCTGCACCACACGAGGACCCT...ACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCTTCTAGAAATAAGGTaGCACACCCAGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVLLEIR*HTQQNP
Trigger: GGGGTTTTGCTGGGTGTGGCACCTTATTTCTAGAAG...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR GCA 90 bp AACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCGATGTTCTTGTATGCTaGTGCCCTGAGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: NLLSILQSRRQAQLWKNSDVLVC*CPETPS
Trigger: TGAGGGGGTCTCAGGGCAGCAGCATACAAGAACATC...GGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595073.5
CDS-3UTR GCA 90 bp GTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATACCAAGGAGAAAGTCATCTGTGTTCACCATaGTCAGGATGCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: VSRLLPISETSLRYQGESHLCSP*SGCGRR
Trigger: TCTGCGGCCGCATCCTGAGCATGGTGAACACAGATG...ACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR GCA 90 bp AACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCTTCCTCCAGGAAGGATaGCTCTGGGATATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NLLSILQSRRQAQLWKNSFLQEG*LWDMAE
Trigger: TTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAA...GGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGTCTCAGAAACCTCCTTaGGATACCAAGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LSILQSRRQAQLWKNSPVSQKPP*DTKEKV
Trigger: TACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGA...CACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR TCA 90 bp CTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTTCTCAGAAACCTCCTTaGGATACCAAGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LLSILQSRRQAQLWKNSPSQKPP*DTKEKV
Trigger: TACTTTCTCCTTGGTATCTCAAGGAGGTTTCTGAGA...AGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CCA 90 bp AACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCATTTTATCCCAGGGTTaGAATTGTCCCAGACACTTA +
Preference number: 4 (lower is better)
Translates to: NLLSILQSRRQAQLWKNSILSQG*NCPRHL
Trigger: TAAGTGTCTGGGACAATTCCAACCCTGGGATAAAAT...GGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601630.5
CDS GCA 90 bp CCGGGATGGCGCCCGCGCCGGCGAAACGTCACCACGCACCGATCCTaGGAGCGCGCGTGGCGGGGACGTACCCTGGAGCCGCTTGCGTGC +
Preference number: 5 (lower is better)
Translates to: PGWRPRRRNVTTHRS*ERAWRGRTLEPLAC
Trigger: GCACGCAAGCGGCTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGATCGGTGCGTGGTGACGTTTCGCCGGCGCGGGCGCCATCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS GCA 90 bp CTCCGCTGCCCCAAACTCGGCCCCGGCGTCGGTAGCGGCGGCACCTaGACATCTGGCGGCCTTGCTCGCGCTTCCGGGATGGCGCCCGCG +
Preference number: 5 (lower is better)
Translates to: LRCPKLGPGVGSGGT*TSGGLARASGMAPA
Trigger: CGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGTGCCGCCGCTACCGACGCCGGGGCCGAGTTTGGGGCAGCGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS CCA 90 bp GCGGCGGCACCTGCACATCTGGCGGCCTTGCTCGCGCTTCCGGGATaGCGCCCGCGCCGGCGAAACGTCACCACGCACCGATCCTGCGAG +
Preference number: 5 (lower is better)
Translates to: AAAPAHLAALLALPG*RPRRRNVTTHRSCE
Trigger: CTCGCAGGATCGGTGCGTGGTGACGTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGTGCCGCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS CCA 90 bp CCGCGCCGGCGAAACGTCACCACGCACCGATCCTGCGAGCGCGCGTaGCGGGGACGTACCCTGGAGCCGCTTGCGTGCGTTAAGTCACGA +
Preference number: 5 (lower is better)
Translates to: PRRRNVTTHRSCERA*RGRTLEPLACVKSR
Trigger: TCGTGACTTAACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGATCGGTGCGTGGTGACGTTTCGCCGGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS CCA 90 bp ACTGACCCTCCTGCACATCTGGCGGCCTTGCTCGCGCTTCCGGGATaGCGCCCGCGCCGGCGAAACGTCACCACGCACCGATCCTGCGAG +
Preference number: 5 (lower is better)
Translates to: TDPPAHLAALLALPG*RPRRRNVTTHRSCE
Trigger: CTCGCAGGATCGGTGCGTGGTGACGTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGAGGGTCAGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540691.5
ENST00000600372.5
CDS CCA 90 bp TCACCACGCACCGATCCTGCGAGCGCGCGTGGCGGGGACGTACCCTaGAGCCGCTTGCGTGCGTTAAGTCACGACAGGAAAGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: SPRTDPASARGGDVP*SRLRALSHDRKGRG
Trigger: GCCCCGCCCTTTCCTGTCGTGACTTAACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGATCGGTGCGTGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CAA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GAGVGWGELRGDRACAPQVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CGTCATCTCCTCGTCATCTGTCTGGCTGCGGCCGTTGATGGCTGGGGAGCCAGGGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: RHLLVICLAAAVDGWGARVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...CCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CAA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LRGDRACAPQGGPDRWWGVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...CCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 90 bp CTGGTGAACATGGTGAAACCCCCGTCTCTGCACATCTGGCGGCCTTaGTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGAAACGTCACCA +
Preference number: 5 (lower is better)
Translates to: LVNMVKPPSLHIWRP*SRFRDGARAGETSP
Trigger: TGGTGACGTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGAGACGGGGGTTTCACCATGTTCACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS-3UTR CAA 90 bp CTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGCCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LCPAPRLQLEWACPGMAEPRWLR*LHGGLQ
Trigger: CTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGG...CTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGCCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: CAQPHDSSWNGRALAWQRPRWLR*LHGGLQ
Trigger: CTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGG...CCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS CCA 90 bp AAGACTAGCCTGGTGAACATGGTGAAACCCCCGTCTCTGCACATCTaGCGGCCTTGCTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGAA +
Preference number: 5 (lower is better)
Translates to: KTSLVNMVKPPSLHI*RPCSRFRDGARAGE
Trigger: TTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGAGACGGGGGTTTCACCATGTTCACCAGGCTAGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS-3UTR CAA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGG +
Preference number: 5 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLAHLAA*LALPGW
Trigger: CCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGC...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR CAA 90 bp CCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PWMTEQGRVTRCHLVCCCVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...GCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCACAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PHDSSWNGRALAWQRGLAQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...TGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: AATLYAAALRPPQGTGQQQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCTGTTCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: APRLQLEWACPGMAEGSCCSAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACA...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS TCA 90 bp AGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: RTRQGYPLPPCMLLP*DPLKAPGSRAIRPS
Trigger: TGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS TCA 90 bp GTGCTGACGTGCTCGGGAGCAGGAACCCTGCGTGACACTTACGGCTaGAGGCCTCTGGGTGCTGCCTGGCCAGTTTCCCTTTCAGCGTCC +
Preference number: 5 (lower is better)
Translates to: VLTCSGAGTLRDTYG*RPLGAAWPVSLSAS
Trigger: GGACGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAGCCGTAAGTGTCACGCAGGGTTCCTGCTCCCGAGCACGTCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598830.5
ENST00000599000.5
CDS CCA 90 bp GCTCGGGAGCAGGAACCCTGCGTGACACTTACGGCTGAAGGCCTCTaGGTGCTGCCTGGCCAGTTTCCCTTTCAGCGTCCTGATACGGCG +
Preference number: 5 (lower is better)
Translates to: AREQEPCVTLTAEGL*VLPGQFPFQRPDTA
Trigger: CGCCGTATCAGGACGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAGCCGTAAGTGTCACGCAGGGTTCCTGCTCCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598830.5
ENST00000599000.5
CDS-3UTR CAA 90 bp CTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGG +
Preference number: 5 (lower is better)
Translates to: LDDRTRQGYPLPPCMLLPAHLAA*LALPGW
Trigger: CCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGC...GGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR CAA 90 bp TGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: CAQPHDSSWNGRALAWQRRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...CCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: WMTEQGRVTRCHLVCCCPVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...AGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGTTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCATTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RCHLVCCCPETPSRHRAALPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...TGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGTACCCTGGAGCCGCTaGCGTGCGTTAAGTCACGAC +
Preference number: 5 (lower is better)
Translates to: GAGVGWGELRGDRACAPQVPWSR*RALSHD
Trigger: GTCGTGACTTAACGCACGCAAGCGGCTCCAGGGTAC...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS CCA 90 bp CCAGGTGAGGTGGGACCAAGAGGCCAGGCCGGGACCGCCATGTGCTaGAACCTAACCCAACCGTGGTGGTATCCTACAGTGGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: PGEVGPRGQAGTAMC*NLTQPWWYPTVGMC
Trigger: ACACATCCCCACTGTAGGATACCACCACGGTTGGGTTAGGTTCCAGCACATGGCGGTCCCGGCCTGGCCTCTTGGTCCCACCTCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CCA 90 bp GACCCACTGCCCATTACAGCCTGGTCTCAGTATCAGGCCCCAAGGTaGCCTTCCAGAAGCCTGCCCTGGGTGGAGAGTGCTGACGTGCTC +
Preference number: 5 (lower is better)
Translates to: DPLPITAWSQYQAPR*PSRSLPWVESADVL
Trigger: GAGCACGTCAGCACTCTCCACCCAGGGCAGGCTTCTGGAAGGCCACCTTGGGGCCTGATACTGAGACCAGGCTGTAATGGGCAGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599000.5
CDS-3UTR CAA 90 bp ATTCCCCTGTGCCCAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: IPLCPAPRLQLEWACPGMRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...CATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTGGGCACAGGGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: AATLYAAALRPPQGTGQQRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...CTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCATCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: CCPETPSRHRAAGLFARHRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...ATGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS-3UTR CAA 90 bp CGTCATCTCCTCGTCATCTGTCTGGCTGCGGCCGTTGATGGCTGGGGAGCCAGGTTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RHLLVICLAAAVDGWGARLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...CCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGACAGATGACGAGGAGATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600099.1
CDS GCA 90 bp TGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTaGTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTC +
Preference number: 5 (lower is better)
Translates to: WMTEQGRVTRCHLVC*CPETPSRHRAAGLF
Trigger: GAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CAGAGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGG +
Preference number: 5 (lower is better)
Translates to: QRGLLAPQVPHLYSEKHRAHLAA*LALPGW
Trigger: CCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGC...TCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR CAA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAACGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: GAGVGWGELRGDRACAPQRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCAGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PAGPSGSTPLFRETQNSAVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...TGCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCATTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: QGRVTRCHLVCCCPETPSLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...TGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCCCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LDDRTRQGYPLPPCMLLPPRWLR*LHGGLQ
Trigger: CTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGG...GGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCAGAATAGAGATCCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PAGMGVPWHGRGVLQNRDPRWLR*LHGGLQ
Trigger: CTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGG...ATCTCTATTCTGCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS TCA 90 bp TGCCTGAAACAGGCAAGAACAGAGTGGTCTGCACTAGTCACCAGGTaGGGTGGGACCAAGAGGCCAGGCCGGGACCGCCATGTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: CLKQARTEWSALVTR*GGTKRPGRDRHVLE
Trigger: TTCCAGCACATGGCGGTCCCGGCCTGGCCTCTTGGTCCCACCTCACCTGGTGACTAGTGCAGACCACTCTGTTCTTGCCTGTTTCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS TCA 90 bp TTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCGGGCAGCAGGGCTATTCGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: LQNRDVPLPPCMLLP*DPLKAPGSRAIRPS
Trigger: TGACGGGCGAATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS GCA 90 bp ATGCTGTCCAGGTCCCGTTTCATCTCTACTAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATCTGCTGCAGGCGGGCACTGGACAGG +
Preference number: 5 (lower is better)
Translates to: MLSRSRFISTRVLVW*RKRSLICCRRALDR
Trigger: CCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCTAGTAGAGATGAAACGGGACCTGGACAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: RCHLVCCCPETPSRHRAAALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...TGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp AAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCTGTGCCGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KHSSEQTSGSALEKFPCAVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...GGCACAGGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: KAELVGAGVGWGELRGDRQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp ACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TEQGRVTRCHLVCCCPETQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...GGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTCCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: WMTEQGRVTRCHLVCCCPPRWLR*LHGGLQ
Trigger: CTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGG...AGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS TCA 90 bp CCTCCGCTGCAGCCAACCTGTGGGCCCCAGCAATCCAGATGGTTCTaGGGTTCCCAGTTTTGCTGGCACACAGATGACCGTAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: PPLQPTCGPQQSRWF*GSQFCWHTDDRNGR
Trigger: CCTGCCATTACGGTCATCTGTGTGCCAGCAAAACTGGGAACCTCAGAACCATCTGGATTGCTGGGGCCCACAGGTTGGCTGCAGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000540691.5
ENST00000596785.5
ENST00000600372.5
ENST00000602094.5
CDS CCA 90 bp AAGATGCTGTCCAGGTCCCGTTTCATCTCTACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTCATCTGCTGCAGGCGGGCACTGGAC +
Preference number: 5 (lower is better)
Translates to: KMLSRSRFISTRVLV*CRKRSLICCRRALD
Trigger: GTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCTAGTAGAGATGAAACGGGACCTGGACAGCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGGCACCGGGCAGCAGGGGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: CHLVCCCPETPSRHRAAGDRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...CCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000600099.1
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: GAGVGWGELRGDRACAPQALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: GWGELRGDRACAPQGGPDRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp AAAGCAGAATTAGTGGGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTTTACCCGCTGCCACCTaGTATGCTGCTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: KAELVGAGVGWGELRGDRLPAAT*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAA...ACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACCCACTAATTCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp AAACTCTTTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: KLFPEVAPFAPWRPSERPQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...AGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAAAGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTGTACCCTGGAGCCGCTaGCGTGCGTTAAGTCACGAC +
Preference number: 5 (lower is better)
Translates to: LTGGGGHLALVSGNLLSIVPWSR*RALSHD
Trigger: GTCGTGACTTAACGCACGCAAGCGGCTCCAGGGTAC...AATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS-3UTR CAA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACGCCAGGATGATGGCGTaGACATCATCTGTGTTCACC +
Preference number: 5 (lower is better)
Translates to: GWGELRGDRACAPQGGPDARMMA*TSSVFT
Trigger: GGTGAACACAGATGATGTCAACGCCATCATCCTGGC...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TTCCCGAGGTGGCTCCGTTTGCTCCATGGAGGCCTTCAGAGAGGCCTGCTGGCCGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: FPRWLRLLHGGLQRGLLADRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...GGCCAGCAGGCCTCTCTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGTGCGGGGGTGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: GAGVGWGELRGDRACAPQDRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...TTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCACCCCCGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGAGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: SEETVLVHLKEVLTGGGGALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...TCCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CCTGACCGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: PDRWWGTSGSGVWEPSKHRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...ATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCGGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp ATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATAGTCTGGCTGCGGCCGTaGATGGCTGGGGAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: MASLRLKTSTYLRNLLEIVWLRP*MAGEPG
Trigger: GCCTGGCTCCCCAGCCATCAACGGCCGCAGCCAGAC...TATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCACCGAGGTGGCTCCGTTaGCTCCATGGAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PAGPSGSTPLFRETQNSAPRWLR*LHGGLQ
Trigger: CTGAAGGCCTCCATGGAGCAAACGGAGCCACCTCGG...TGCTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCTGTAATCTCAGCACTTaGGGAAGCCAAGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: QNKAGLPAATLYAAALRPCNLST*GSQGWW
Trigger: CCACCAGCCTTGGCTTCCCAAAGTGCTGAGATTACA...GGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS GCA 90 bp TCTACTAGGGTCCTCGTGTGGTGCAGGAAGCGTTCGCTCATCTGCTaGAGGCGGGCACTGGACAGGTTGTTGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: STRVLVWCRKRSLIC*RRALDRLLKLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCTAGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 90 bp ATCTCTACTAGGGTCCTCGTGTGGTGCAGGAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGACAGGTTGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: ISTRVLVWCRKRSLI*CRRALDRLLKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCTAGTAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp ATGGCCAGCCTCCGTCTCAAGACTTCTACCTATCTCAGAAACCTCCTTGAGATAGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGG +
Preference number: 5 (lower is better)
Translates to: MASLRLKTSTYLRNLLEIAHLAA*LALPGW
Trigger: CCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGC...TATCTCAAGGAGGTTTCTGAGATAGGTAGAAGTCTTGAGACGGAGGCTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
CDS-3UTR CAA 90 bp AAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTCAAGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: KAGLPAATLYAAALRPPQALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...TTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCAGAGGAGACCGTGCTaGTGCACCTCAAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: ALVSGNLLSILQSRRQAQQRRPC*CTSRRS
Trigger: GGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTG...CTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTGCCAAAGAAGCATGATCTaGTATAAAGAGGATACCTGG +
Preference number: 5 (lower is better)
Translates to: APRLQLEWACPGMAEGSCQRSMI*YKEDTW
Trigger: CCAGGTATCCTCTTTATACAAGATCATGCTTCTTTG...GCAAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR CAA 90 bp CTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGGGGGATTTTATCCCAGGGTaGGAATTGTCCCAGACACTT +
Preference number: 5 (lower is better)
Translates to: LRGDRACAPQGGPDRWWGDFIPG*ELSQTL
Trigger: AAGTGTCTGGGACAATTCCAACCCTGGGATAAAATC...CCCCCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601630.5
CDS-3UTR CAA 90 bp AACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGACCCCCTGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: NKAGLPAATLYAAALRPPDRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...AGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGGGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: WAGVNSEETVLVHLKEVLDRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...CAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: VNSEETVLVHLKEVLTGGALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...ACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: GGGGHLALVSGNLLSILQRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...CTGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CAGCCCCACGACTCCAGCTGGAATGGGCGTGCCCTGGCATGGCAGAGGGGTCTTCCAAGGAGAAAGTATTaGATACTTTTACGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: QPHDSSWNGRALAWQRGLPRRKY*ILLRSK
Trigger: CTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTGG...AAGACCCCTCTGCCATGCCAGGGCACGCCCATTCCAGCTGGAGTCGTGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 90 bp ACGGCCACAGCCCACGGGTCTCACAAAGGTGTGAATCTGAACAGGTaGACAATATCCAGCTGTGACAGGACAGTGGCTTCTTACAGCAGC +
Preference number: 5 (lower is better)
Translates to: TATAHGSHKGVNLNR*TISSCDRTVASYSS
Trigger: GCTGCTGTAAGAAGCCACTGTCCTGTCACAGCTGGATATTGTGCACCTGTTCAGATTCACACCTTTGTGAGACCCGTGGGCTGTGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600796.1
ENST00000602094.5
CDS-3UTR CAA 90 bp GAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: ELSTLRAEWMASLRLKTSALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...AGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp ATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCCTGAGGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: MTEQGRVTRCHLVCCCPEALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...CTCAGGGCAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000599319.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGCAGAGGGGTCTTGCAGAATAGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCATGGCAGAGGGGTCTaGCAGAATAGAGATGTTCCG +
Preference number: 5 (lower is better)
Translates to: GRGVLQNRDVPLPPCMLLHGRGV*QNRDVP
Trigger: CGGAACATCTCTATTCTGCAAGACCCCTCTGCCATG...CAGCAGCATACAAGGTGGCAGCGGAACATCTCTATTCTGCAAGACCCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS TCA 90 bp GCTTCCTCCCTCATCCCCTGCCTAACAACTGCTGTCCTCACAAGCTaGACGTGTGTGGCTGCTTCAGCAAATCATCACCACCTCCAATGT +
Preference number: 5 (lower is better)
Translates to: ASSLIPCLTTAVLTS*TCVAASANHHHLQC
Trigger: ACATTGGAGGTGGTGATGATTTGCTGAAGCAGCCACACACGTTCAGCTTGTGAGGACAGCAGTTGTTAGGCAGGGGATGAGGGAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598830.5
CDS TCA 90 bp AAACTGTACCCAAGCACATTAGAATCCCATCACCTCCCACTTCCATaGGCCCAAGGCCACAGGTACCTCTCACCTGCACAGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KLYPSTLESHHLPLP*AQGHRYLSPAQICQ
Trigger: CTGGCAGATCTGTGCAGGTGAGAGGTACCTGTGGCCTTGGGCTCATGGAAGTGGGAGGTGATGGGATTCTAATGTGCTTGGGTACAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598830.5
CDS GCA 90 bp GGGATGTGTGACTGTGGCTCAGTCATGCCACCTGAACCTCAGGTGTaGCACCCCAGGAATTTGGAGGTATTGGGCAAACTAAGAGAGGTT +
Preference number: 5 (lower is better)
Translates to: GMCDCGSVMPPEPQV*HPRNLEVLGKLREV
Trigger: AACCTCTCTTAGTTTGCCCAATACCTCCAAATTCCTGGGGTGGCACACCTGAGGTTCAGGTGGCATGACTGAGCCACAGTCACACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS-3UTR CAA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CGGTGGTGGGGGACATCTGGCTCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAATCCCAGGGTTGGAATaGTCCCAGACACTTAAGTGC +
Preference number: 5 (lower is better)
Translates to: RWWGTSGSGVWEPSKHSSIPGLE*SQTLKC
Trigger: GCACTTAAGTGTCTGGGACAATTCCAACCCTGGGAT...TGAAGAATGCTTAGAAGGTTCCCAGACACCAGAGCCAGATGTCCCCCACCACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601630.5
CDS-3UTR CAA 90 bp GAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: EACWPLRFHTSIQRNTELDRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...GAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: LVSGNLLSILQSRRQAQLALDRL*KLSSIS
Trigger: TGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGC...GAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp CCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAATTCCCCCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: PSKHSSEQTSGSALEKFPRALDR*LKLSSI
Trigger: GATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCG...GGGGAATTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGCTGGGGTGAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCCAAGGAGAAAGTATTaGATACTTTTACGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GWGELRGDRACAPQGGPDPRRKY*ILLRSK
Trigger: CTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTGG...GTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTCACCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GAACTCAGAGGAGACCGTGCTTGTGCACCTCAAGGAGGTCCTGACCGGTGGTGGCCAAGGAGAAAGTATTaGATACTTTTACGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: ELRGDRACAPQGGPDRWWPRRKY*ILLRSK
Trigger: CTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTGG...CCACCACCGGTCAGGACCTCCTTGAGGTGCACAAGCACGGTCTCCTCTGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS CCA 90 bp ACCTGGAGAGGGAGGCCCATAGCTAGTACCAGTGAGACACAGTACTaGGACCTTCTGGGATACACTCCTCCTTCAAAACAGGACTCTTTT +
Preference number: 5 (lower is better)
Translates to: TWRGRPIASTSETQY*DLLGYTPPSKQDSF
Trigger: AAAAGAGTCCTGTTTTGAAGGAGGAGTGTATCCCAGAAGGTCCCAGTACTGTGTCTCACTGGTACTAGCTATGGGCCTCCCTCTCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596244.1
CDS-3UTR CAA 90 bp AGAGGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: RGLLAPQVPHLYSEKHRTDRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...AGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GCCCTGGATGACAGAACAAGGCAGGGTTACCCGCTGCCACCTTGTATGCTGCTGCCAAGGAGAAAGTATTaGATACTTTTACGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: ALDDRTRQGYPLPPCMLLPRRKY*ILLRSK
Trigger: CTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTGG...CAGCAGCATACAAGGTGGCAGCGGGTAACCCTGCCTTGTTCTGTCATCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000601630.5
ENST00000602094.5
CDS TCA 90 bp ACATGCCATGCAGAGACACCCAGTCTCCACATTCCCAAAGAAGCATaGTCTTGTATAAAGAGGATACCTGGACCGGGTGCTCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: TCHAETPSLHIPKEA*SCIKRIPGPGAHAC
Trigger: ACAGGCATGAGCACCCGGTCCAGGTATCCTCTTTATACAAGATCATGCTTCTTTGGGAATGTGGAGACTGGGTGTCTCTGCATGGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS-3UTR CAA 90 bp TCTGGTGTCTGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTGACAGGTTGTTGAAGTaGAGCAGCATCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: SGVWEPSKHSSEQTSGSADRLLK*SSISLV
Trigger: GACCAATGAGATGCTGCTCAACTTCAACAACCTGTC...AGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCAGACACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GAACTCAGCACGCTCAGGGCTGAATGGATGGCCAGCCTCCGTCTCAAGACTTCTCCAAGGAGAAAGTATTaGATACTTTTACGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: ELSTLRAEWMASLRLKTSPRRKY*ILLRSK
Trigger: CTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTGG...AGAAGTCTTGAGACGGAGGCTGGCCATCCATTCAGCCCTGAGCGTGCTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp GGCCTGCTGGCCCCTCAGGTTCCACACCTCTATTCAGAGAAACACAGAACTCAGCCAAGGAGAAAGTATTaGATACTTTTACGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GLLAPQVPHLYSEKHRTQPRRKY*ILLRSK
Trigger: CTTGCTCCGTAAAAGTATCAAATACTTTCTCCTTGG...CTGAGTTCTGTGTTTCTCTGAATAGAGGTGTGGAACCTGAGGGGCCAGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000601630.5
ENST00000602094.5
CDS-3UTR CAA 90 bp TGGGAACCTTCTAAGCATTCTTCAGAGCAGACGTCAGGCTCAGCTCTGGAAAAAAGAATAGAGATGTTCTaGTATGCTGCTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: WEPSKHSSEQTSGSALEKRIEMF*YAAALR
Trigger: TCTCAGGGCAGCAGCATACAAGAACATCTCTATTCT...TTTTTCCAGAGCTGAGCCTGACGTCTGCTCTGAAGAATGCTTAGAAGGTTCCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000595073.5
CDS TCA 90 bp CACACCCAGCAAAACCCCCTTCCCTCTAATAATAACTATGGTTATTaGACTCCTATGACATGCCATGCAGAGACACCCAGTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: HTQQNPLPSNNNYGY*TPMTCHAETPSLHI
Trigger: AATGTGGAGACTGGGTGTCTCTGCATGGCATGTCATAGGAGTTCAATAACCATAGTTATTATTAGAGGGAAGGGGGTTTTGCTGGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS GCA 90 bp TATCCAGCTGTGACAGGACAGTGGCTTCTTACAGCAGCTGATTTCTaGCTGACTTCTGATGTTTCTCCAGGAAAAAGGAAACAGGGATTT +
Preference number: 5 (lower is better)
Translates to: YPAVTGQWLLTAADF*LTSDVSPGKRKQGF
Trigger: AAATCCCTGTTTCCTTTTTCCTGGAGAAACATCAGAAGTCAGGCAGAAATCAGCTGCTGTAAGAAGCCACTGTCCTGTCACAGCTGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS TCA 90 bp AAAACCCCCTTCCCTCTAATAATAACTATGGTTATTGAACTCCTATaGCATGCCATGCAGAGACACCCAGTCTCCACATTCCCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: KTPFPLIITMVIELL*HAMQRHPVSTFPKK
Trigger: CTTCTTTGGGAATGTGGAGACTGGGTGTCTCTGCATGGCATGTCATAGGAGTTCAATAACCATAGTTATTATTAGAGGGAAGGGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602094.5
CDS TCA 90 bp TACAGCACTGACCCTCCTAGGGAGTTCAGGAAAAATCTAGGATCTTaGTATAGTTTGGCTCTGAGGCCCACACATTTAATAGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: YSTDPPREFRKNLGS*YSLALRPTHLIAKK
Trigger: TTTCTTGGCTATTAAATGTGTGGGCCTCAGAGCCAAACTATATCAAGATCCTAGATTTTTCCTGAACTCCCTAGGAGGGTCAGTGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596785.5
ENST00000602094.5
CDS CAA 90 bp TCGGCCCCGGCGTCGGTAGCGGCGGCACCTGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGAAACGTCACC +
Preference number: 6 (lower is better)
Translates to: SAPASVAAAPAHLAA*LALPGWRPRRRNVT
Trigger: GGTGACGTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGTGCCGCCGCTACCGACGCCGGGGCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS GCA 72 bp CGCCCGCGCCGGCGAAACGTCACCACGCACCGATCCTaGGAGCGCGCGTGGCGGGGACGTACCCTGGAGCCG +
Preference number: 6 (lower is better)
Translates to: RPRRRNVTTHRS*ERAWRGRTLEP
Trigger: CGGCTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGATCGGTGCGTGGTGACGTTTCGCCGGCGCGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS CAA 72 bp GCGTCGGTAGCGGCGGCACCTGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: ASVAAAPAHLAA*LALPGWRPRRR
Trigger: TCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGTGCCGCCGCTACCGACGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS GCA 72 bp CCCAAACTCGGCCCCGGCGTCGGTAGCGGCGGCACCTaGACATCTGGCGGCCTTGCTCGCGCTTCCGGGATG +
Preference number: 6 (lower is better)
Translates to: PKLGPGVGSGGT*TSGGLARASGM
Trigger: CATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGTGCCGCCGCTACCGACGCCGGGGCCGAGTTTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539106.5
CDS CCA 72 bp CCTGCACATCTGGCGGCCTTGCTCGCGCTTCCGGGATaGCGCCCGCGCCGGCGAAACGTCACCACGCACCGA +
Preference number: 6 (lower is better)
Translates to: PAHLAALLALPG*RPRRRNVTTHR
Trigger: TCGGTGCGTGGTGACGTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539106.5
ENST00000540691.5
ENST00000600372.5
CDS CAA 72 bp GGCTACAGCACTGACCCTCCTGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: GYSTDPPAHLAA*LALPGWRPRRR
Trigger: TCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGAGGGTCAGTGCTGTAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540691.5
ENST00000600372.5
CDS GCA 72 bp GCTACAGCACTGACCCTCCTGCACATCTGGCGGCCTTaGTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGAA +
Preference number: 6 (lower is better)
Translates to: ATALTLLHIWRP*SRFRDGARAGE
Trigger: TTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGGAGGGTCAGTGCTGTAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540691.5
ENST00000600372.5
CDS CCA 72 bp TCTGCACATCTGGCGGCCTTGCTCGCGCTTCCGGGATaGCGCCCGCGCCGGCGAAACGTCACCACGCACCGA +
Preference number: 6 (lower is better)
Translates to: SAHLAALLALPG*RPRRRNVTTHR
Trigger: TCGGTGCGTGGTGACGTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS CAA 72 bp GCGAGCGCGCGTGGCGGGGACGTACCCTGGAGCCGCTaGCGTGCGTTAAGTCACGACAGGAAAGGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: ASARGGDVPWSR*RALSHDRKGRG
Trigger: GCCCCGCCCTTTCCTGTCGTGACTTAACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCCACGCGCGCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS CAA 72 bp CATGGTGAAACCCCCGTCTCTGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: HGETPVSAHLAA*LALPGWRPRRR
Trigger: TCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGAGACGGGGGTTTCACCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS GCA 72 bp ATGGTGAAACCCCCGTCTCTGCACATCTGGCGGCCTTaGTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGAA +
Preference number: 6 (lower is better)
Translates to: MVKPPSLHIWRP*SRFRDGARAGE
Trigger: TTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGAGACGGGGGTTTCACCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS CCA 72 bp CGAAACGTCACCACGCACCGATCCTGCGAGCGCGCGTaGCGGGGACGTACCCTGGAGCCGCTTGCGTGCGTT +
Preference number: 6 (lower is better)
Translates to: RNVTTHRSCERA*RGRTLEPLACV
Trigger: AACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGATCGGTGCGTGGTGACGTTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS CAA 90 bp CCTGGTGAACATGGTGAAACCCCCGTCTCTGCACATCTGGCGGCCTaGCTCGCGCTTCCGGGATGGCGCCCGCGCCGGCGAAACGTCACC +
Preference number: 6 (lower is better)
Translates to: PGEHGETPVSAHLAA*LALPGWRPRRRNVT
Trigger: GGTGACGTTTCGCCGGCGCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGAGACGGGGGTTTCACCATGTTCACCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS GCA 72 bp CGCGCGTGGCGGGGACGTACCCTGGAGCCGCTTGCGTaGGTTAAGTCACGACAGGAAAGGGCGGGGCTTAGA +
Preference number: 6 (lower is better)
Translates to: RAWRGRTLEPLA*VKSRQERAGLR
Trigger: TCTAAGCCCCGCCCTTTCCTGTCGTGACTTAACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCCACGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS CCA 72 bp CTGGTGAACATGGTGAAACCCCCGTCTCTGCACATCTaGCGGCCTTGCTCGCGCTTCCGGGATGGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: LVNMVKPPSLHI*RPCSRFRDGAR
Trigger: GCGGGCGCCATCCCGGAAGCGCGAGCAAGGCCGCCAGATGTGCAGAGACGGGGGTTTCACCATGTTCACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS CCA 72 bp ACCGATCCTGCGAGCGCGCGTGGCGGGGACGTACCCTaGAGCCGCTTGCGTGCGTTAAGTCACGACAGGAAA +
Preference number: 6 (lower is better)
Translates to: TDPASARGGDVP*SRLRALSHDRK
Trigger: TTTCCTGTCGTGACTTAACGCACGCAAGCGGCTCCAGGGTACGTCCCCGCCACGCGCGCTCGCAGGATCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539106.5
ENST00000540691.5
CDS TCA 72 bp GAGAGTGCTGACGTGCTCGGGAGCAGGAACCCTGCGTaGCACTTACGGCTGAAGGCCTCTGGGTGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: ESADVLGSRNPA*HLRLKASGCCL
Trigger: CAGGCAGCACCCAGAGGCCTTCAGCCGTAAGTGTCACGCAGGGTTCCTGCTCCCGAGCACGTCAGCACTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598830.5
ENST00000599000.5
CDS GCA 72 bp CTCAGTATCAGGCCCCAAGGTGGCCTTCCAGAAGCCTaGCCTGGGTGGAGAGTGCTGACGTGCTCGGGAGCA +
Preference number: 6 (lower is better)
Translates to: LSIRPQGGLPEA*PGWRVLTCSGA
Trigger: TGCTCCCGAGCACGTCAGCACTCTCCACCCAGGGCAGGCTTCTGGAAGGCCACCTTGGGGCCTGATACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598830.5
ENST00000599000.5
CDS GCA 72 bp GAGGTGGGACCAAGAGGCCAGGCCGGGACCGCCATGTaGTGGAACCTAACCCAACCGTGGTGGTATCCTACA +
Preference number: 6 (lower is better)
Translates to: EVGPRGQAGTAM*WNLTQPWWYPT
Trigger: TGTAGGATACCACCACGGTTGGGTTAGGTTCCAGCACATGGCGGTCCCGGCCTGGCCTCTTGGTCCCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CCA 72 bp GTGGGACCAAGAGGCCAGGCCGGGACCGCCATGTGCTaGAACCTAACCCAACCGTGGTGGTATCCTACAGTG +
Preference number: 6 (lower is better)
Translates to: VGPRGQAGTAMC*NLTQPWWYPTV
Trigger: CACTGTAGGATACCACCACGGTTGGGTTAGGTTCCAGCACATGGCGGTCCCGGCCTGGCCTCTTGGTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS TCA 72 bp AGAGATGTTCCGCTGCCACCTTGTATGCTGCTGCCCTaGGACCCCCTCAAGGCACCGGGCAGCAGGGCTATT +
Preference number: 6 (lower is better)
Translates to: RDVPLPPCMLLP*DPLKAPGSRAI
Trigger: AATAGCCCTGCTGCCCGGTGCCTTGAGGGGGTCTCAGGGCAGCAGCATACAAGGTGGCAGCGGAACATCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600654.5
CDS CCA 72 bp GCCGGGACCGCCATGTGCTGGAACCTAACCCAACCGTaGTGGTATCCTACAGTGGGGATGTGTGACTGTGGC +
Preference number: 6 (lower is better)
Translates to: AGTAMCWNLTQP*WYPTVGMCDCG
Trigger: GCCACAGTCACACATCCCCACTGTAGGATACCACCACGGTTGGGTTAGGTTCCAGCACATGGCGGTCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CCA 72 bp AAGAACAGAGTGGTCTGCACTAGTCACCAGGTGAGGTaGGACCAAGAGGCCAGGCCGGGACCGCCATGTGCT +
Preference number: 6 (lower is better)
Translates to: KNRVVCTSHQVR*DQEARPGPPCA
Trigger: AGCACATGGCGGTCCCGGCCTGGCCTCTTGGTCCCACCTCACCTGGTGACTAGTGCAGACCACTCTGTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CCA 72 bp CAGGAACCCTGCGTGACACTTACGGCTGAAGGCCTCTaGGTGCTGCCTGGCCAGTTTCCCTTTCAGCGTCCT +
Preference number: 6 (lower is better)
Translates to: QEPCVTLTAEGL*VLPGQFPFQRP
Trigger: AGGACGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAGCCGTAAGTGTCACGCAGGGTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598830.5
ENST00000599000.5
CDS GCA 72 bp AGGGTCCTCGTGTGGTGCAGGAAGCGTTCGCTCATCTaGTGCAGGCGGGCACTGGACAGGTTGTTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: RVLVWCRKRSLI*CRRALDRLLKL
Trigger: CAACTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 72 bp AGGTCCCGTTTCATCTCTACTAGGGTCCTCGTGTGGTaGAGGAAGCGTTCGCTCATCTGCTGCAGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: RSRFISTRVLVW*RKRSLICCRRA
Trigger: TGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCTAGTAGAGATGAAACGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 72 bp CCGTGCTCTGTTCTGAGGTGGCAATGGTGGTCGTGGTaGTGGGTGGGATGGGGTCTTCATCCTCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PCSVLRWQWWSW*WVGWGLHPLPP
Trigger: TGGAGGAAGAGGATGAAGACCCCATCCCACCCAGCACCACGACCACCATTGCCACCTCAGAACAGAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000597438.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 72 bp CCTCCGCTGCCTGAAACAGGCAAGAACAGAGTGGTCTaGACTAGTCACCAGGTGAGGTGGGACCAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: PPLPETGKNRVV*TSHQVRWDQEA
Trigger: GGCCTCTTGGTCCCACCTCACCTGGTGACTAGTGCAGACCACTCTGTTCTTGCCTGTTTCAGGCAGCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CCA 72 bp TCCAGGTCCCGTTTCATCTCTACTAGGGTCCTCGTGTaGTGCAGGAAGCGTTCGCTCATCTGCTGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SRSRFISTRVLV*CRKRSLICCRR
Trigger: CCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCTAGTAGAGATGAAACGGGACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS CCA 72 bp CAGGAAGGATGCCTCTGGGATATGGCTGAAGGCCTCTaGGTGCTGCCTGGCCAGTTTCCCTTTCAGCGTCCT +
Preference number: 6 (lower is better)
Translates to: QEGCLWDMAEGL*VLPGQFPFQRP
Trigger: AGGACGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000597438.5
ENST00000599319.5
ENST00000600372.5
ENST00000600654.5
ENST00000602094.5
CDS CCA 72 bp CAGGAAGGATGCCTCTGGGATATGGCTGAAGGCCTCTaGGTGCTGCCTGGCCAGTTTCCCTTTCAGCGTCGT +
Preference number: 6 (lower is better)
Translates to: QEGCLWDMAEGL*VLPGQFPFQRR
Trigger: ACGACGCTGAAAGGGAAACTGGCCAGGCAGCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601630.5
CDS CCA 72 bp GGGACCGCCATGTGCTGGAACCTAACCCAACCGTGGTaGTATCCTACAGTGGGGATGTGTGACTGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: GTAMCWNLTQPW*YPTVGMCDCGS
Trigger: TGAGCCACAGTCACACATCCCCACTGTAGGATACCACCACGGTTGGGTTAGGTTCCAGCACATGGCGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CAA 90 bp AGGAAGCGTTCGCTCATCTGCTGCAGGCGGGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCATTGGTCTTCTCAAAGCGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RKRSLICCRRALDRL*KLSSISLVFSKRSS
Trigger: GCTGGACCGCTTTGAGAAGACCAATGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS CAA 90 bp TGCAGGAAGCGTTCGCTCATCTGCTGCAGGCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATCTCATTGGTCTTCTCAAAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: CRKRSLICCRRALDR*LKLSSISLVFSKRS
Trigger: GGACCGCTTTGAGAAGACCAATGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS TCA 72 bp CCAAGCACATTAGAATCCCATCACCTCCCACTTCCATaGGCCCAAGGCCACAGGTACCTCTCACCTGCACAG +
Preference number: 6 (lower is better)
Translates to: PSTLESHHLPLP*AQGHRYLSPAQ
Trigger: CTGTGCAGGTGAGAGGTACCTGTGGCCTTGGGCTCATGGAAGTGGGAGGTGATGGGATTCTAATGTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598830.5
CDS CAA 72 bp CGGTCCAGCATGTTCTTCTGGGCCAGGATGATGGCGTaGACATCATCTGTGTTCACCATGCTCAGGATGCGG +
Preference number: 6 (lower is better)
Translates to: RSSMFFWARMMA*TSSVFTMLRMR
Trigger: CCGCATCCTGAGCATGGTGAACACAGATGATGTCAACGCCATCATCCTGGCCCAGAAGAACATGCTGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS CAA 90 bp TTCTCAAAGCGGTCCAGCATGTTCTTCTGGGCCAGGATGATGGCGTaGACATCATCTGTGTTCACCATGCTCAGGATGCGGCCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: FSKRSSMFFWARMMA*TSSVFTMLRMRPQK
Trigger: CTTCTGCGGCCGCATCCTGAGCATGGTGAACACAGATGATGTCAACGCCATCATCCTGGCCCAGAAGAACATGCTGGACCGCTTTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 72 bp GACTGTGGCTCAGTCATGCCACCTGAACCTCAGGTGTaGCACCCCAGGAATTTGGAGGTATTGGGCAAACTA +
Preference number: 6 (lower is better)
Translates to: DCGSVMPPEPQV*HPRNLEVLGKL
Trigger: TAGTTTGCCCAATACCTCCAAATTCCTGGGGTGGCACACCTGAGGTTCAGGTGGCATGACTGAGCCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CAA 72 bp CGTTCGCTCATCTGCTGCAGGCGGGCACTGGACAGGTaGTTGAAGTTGAGCAGCATCTCATTGGTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: RSLICCRRALDR*LKLSSISLVFS
Trigger: TGAGAAGACCAATGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS TCA 72 bp CAGGACAGTGGCTTCTTACAGCAGCTGATTTCTGCCTaGCTTCTGGACCGGGTGCTCATGCCTGTAATCTCA +
Preference number: 6 (lower is better)
Translates to: QDSGFLQQLISA*LLDRVLMPVIS
Trigger: TGAGATTACAGGCATGAGCACCCGGTCCAGAAGTCAGGCAGAAATCAGCTGCTGTAAGAAGCCACTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600796.1
CDS CCA 72 bp GGGAGGCCCATAGCTAGTACCAGTGAGACACAGTACTaGGACCTTCTGGGATACACTCCTCCTTCAAAACAG +
Preference number: 6 (lower is better)
Translates to: GRPIASTSETQY*DLLGYTPPSKQ
Trigger: CTGTTTTGAAGGAGGAGTGTATCCCAGAAGGTCCCAGTACTGTGTCTCACTGGTACTAGCTATGGGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596244.1
CDS CAA 72 bp TCGCTCATCTGCTGCAGGCGGGCACTGGACAGGTTGTaGAAGTTGAGCAGCATCTCATTGGTCTTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: SLICCRRALDRL*KLSSISLVFSK
Trigger: CTTTGAGAAGACCAATGAGATGCTGCTCAACTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000222307.9
ENST00000539106.5
ENST00000540691.5
ENST00000595073.5
ENST00000595870.5
ENST00000596785.5
ENST00000597438.5
ENST00000598830.5
ENST00000599000.5
ENST00000599319.5
ENST00000600099.1
ENST00000600372.5
ENST00000600654.5
ENST00000601630.5
ENST00000602094.5
CDS GCA 72 bp TTTATCCCAGGGTTGGAATTGTCCCAGACACTTAAGTaGGCAGTGAAGCCTGATACGGCGGAAGATGCTGTC +
Preference number: 6 (lower is better)
Translates to: FIPGLELSQTLK*AVKPDTAEDAV
Trigger: GACAGCATCTTCCGCCGTATCAGGCTTCACTGCGCACTTAAGTGTCTGGGACAATTCCAACCCTGGGATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601630.5
CDS CAA 90 bp CAGTTTCCCTTTCAGCGTCGTCAAGATTTTATCCCAGGGTTGGAATaGTCCCAGACACTTAAGTGCGCAGTGAAGCCTGATACGGCGGAA +
Preference number: 6 (lower is better)
Translates to: QFPFQRRQDFIPGLE*SQTLKCAVKPDTAE
Trigger: TTCCGCCGTATCAGGCTTCACTGCGCACTTAAGTGTCTGGGACAATTCCAACCCTGGGATAAAATCTTGACGACGCTGAAAGGGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601630.5
CDS GCA 72 bp AACAACTGCTGTCCTCACAAGCTGAACGTGTGTGGCTaGTTCAGCAAATCATCACCACCTCCAATGTCTCCT +
Preference number: 6 (lower is better)
Translates to: NNCCPHKLNVCG*FSKSSPPPMSP
Trigger: AGGAGACATTGGAGGTGGTGATGATTTGCTGAAGCAGCCACACACGTTCAGCTTGTGAGGACAGCAGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598830.5
CDS CAA 90 bp GGCTCAGTCATGCCACCTGAACCTCAGGTGTGCCACCCCAGGAATTaGGAGGTATTGGGCAAACTAAGAGAGGTTGTATTTGTAAACTGT +
Preference number: 6 (lower is better)
Translates to: GSVMPPEPQVCHPRN*EVLGKLREVVFVNC
Trigger: ACAGTTTACAAATACAACCTCTCTTAGTTTGCCCAATACCTCCAAATTCCTGGGGTGGCACACCTGAGGTTCAGGTGGCATGACTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CAA 72 bp ATGCCACCTGAACCTCAGGTGTGCCACCCCAGGAATTaGGAGGTATTGGGCAAACTAAGAGAGGTTGTATTT +
Preference number: 6 (lower is better)
Translates to: MPPEPQVCHPRN*EVLGKLREVVF
Trigger: AAATACAACCTCTCTTAGTTTGCCCAATACCTCCAAATTCCTGGGGTGGCACACCTGAGGTTCAGGTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CAA 90 bp ATGCCACCTGAACCTCAGGTGTGCCACCCCAGGAATTTGGAGGTATaGGGCAAACTAAGAGAGGTTGTATTTGTAAACTGTACCCAAGCA +
Preference number: 6 (lower is better)
Translates to: MPPEPQVCHPRNLEV*GKLREVVFVNCTQA
Trigger: TGCTTGGGTACAGTTTACAAATACAACCTCTCTTAGTTTGCCCAATACCTCCAAATTCCTGGGGTGGCACACCTGAGGTTCAGGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS CAA 90 bp ATTGACCCAGCAAGAGCTCTGATCCCAACTCCAAATGTAGATTTATaGAAGAAACGCAGAGAGGTAGGCTGTTTGACCATGGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: IDPARALIPTPNVDL*KKRREVGCLTMGEP
Trigger: TGGCTCTCCCATGGTCAAACAGCCTACCTCTCTGCGTTTCTTCAATAAATCTACATTTGGAGTTGGGATCAGAGCTCTTGCTGGGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597438.5
CDS CAA 72 bp TTTCAGCGTCGTCAAGATTTTATCCCAGGGTTGGAATaGTCCCAGACACTTAAGTGCGCAGTGAAGCCTGAT +
Preference number: 6 (lower is better)
Translates to: FQRRQDFIPGLE*SQTLKCAVKPD
Trigger: ATCAGGCTTCACTGCGCACTTAAGTGTCTGGGACAATTCCAACCCTGGGATAAAATCTTGACGACGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601630.5
CDS CAA 72 bp GAACCTCAGGTGTGCCACCCCAGGAATTTGGAGGTATaGGGCAAACTAAGAGAGGTTGTATTTGTAAACTGT +
Preference number: 6 (lower is better)
Translates to: EPQVCHPRNLEV*GKLREVVFVNC
Trigger: ACAGTTTACAAATACAACCTCTCTTAGTTTGCCCAATACCTCCAAATTCCTGGGGTGGCACACCTGAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595870.5
ENST00000598830.5
CDS TCA 72 bp TTCCAAGATATCATGGAGGCCAAGAGCATCTATTTGTaGTCTGTATCTGGTCAGTGGTTTGCAGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: FQDIMEAKSIYL*SVSGQWFAAPS
Trigger: AGAAGGTGCTGCAAACCACTGACCAGATACAGATCACAAATAGATGCTCTTGGCCTCCATGATATCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602094.5