Pregenerated sensors for KTN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000126777Ensembl transcript IDs: ENST00000334975.13, ENST00000395308.5, ENST00000395309.7, ENST00000395311.5, ENST00000395314.8, ENST00000413890.6, ENST00000438792.6, ENST00000459737.5, ENST00000553360.5, ENST00000553624.5, ENST00000553710.1, ENST00000554294.1, ENST00000554507.5, ENST00000554567.1, ENST00000554570.1, ENST00000554831.1, ENST00000554890.1, ENST00000555172.5, ENST00000555506.1, ENST00000555573.5, ENST00000556631.1
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGTACTTGGCAGTTCACAAATTCTCACCGTTACAACAACCCCATaGGGTATTTATTCCCATTCTATAGATAGGGAAACCACAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TVLGSSQILTVTTTP*GIYSHSIDRETTAQ Trigger: TTGAGCTGTGGTTTCCCTATCTATAGAATGGGAATAAATACCTCATGGGGTTGTTGTAACGGTGAGAATTTGTGAACTGCCAAGTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| 3UTR-3UTR GCA 90 bp | TGCCAACCACTGTACTTGGCAGTTCACAAATTCTCACCGTTACAACAACCCCATACTGACACTGCTATCTaGTGGCCTCCAGTGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: CQPLYLAVHKFSPLQQPHTDTAI*WPPVSW Trigger: CCAGGACACTGGAGGCCAGCAGATAGCAGTGTCAGT...ATGGGGTTGTTGTAACGGTGAGAATTTGTGAACTGCCAAGTACAGTGGTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| 3UTR-3UTR CCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTACCACTTCCCTGTATTaGCTAGGTCTTTCTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: TISSSSNCDAEEASFKLCTTSLY*LGLSLS Trigger: AGAAAGAGAAAGACCTAGCCAATACAGGGAAGTGGT...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| 3UTR-3UTR CCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTCCAAAACAGCCTTCATaGTATTCATCTGTTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TISSSSNCDAEEASFKLCPKQPS*YSSVPL Trigger: AAGAGGAACAGATGAATACCATGAAGGCTGTTTTGG...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| 3UTR-3UTR TCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTGATTCATTTTCTTCTTaGAGATCCTGTAACCACTTC | + |
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Preference number: 2 (lower is better) Translates to: TISSSSNCDAEEASFKLCDSFSS*RSCNHF Trigger: GAAGTGGTTACAGGATCTTCAAGAAGAAAATGAATC...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| 3UTR GCA 72 bp | GTGGCAAAACTAGAAGGAAAGACTGACACTGCTATCTaGTGGCCTCCAGTGTCCTGGCTCTTTTCACACGGG | + |
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Preference number: 3 (lower is better) Translates to: VAKLEGKTDTAI*WPPVSWLFSHG Trigger: CCCGTGTGAAAAGAGCCAGGACACTGGAGGCCAGCAGATAGCAGTGTCAGTCTTTCCTTCTAGTTTTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| 3UTR TCA 72 bp | CACAGAAAACGAAGTGGCAAAACTAGAAGGAAAGACTaGCACTGCTATCTGCTGGCCTCCAGTGTCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: HRKRSGKTRRKD*HCYLLASSVLA Trigger: AGCCAGGACACTGGAGGCCAGCAGATAGCAGTGTCAGTCTTTCCTTCTAGTTTTGCCACTTCGTTTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| 3UTR-3UTR CAA 90 bp | TGTTGTGTTGTGTTTTTACATACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGAGAGTTTCATaGATTTTAGGGCCAATTCTC | + |
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Preference number: 3 (lower is better) Translates to: CCVVFLHTQKSGDKRLKGWVRVS*ILGPIL Trigger: GAGAATTGGCCCTAAAATCAATGAAACTCTCACCCA...CCCCTTTAACCTCTTGTCTCCAGACTTCTGGGTATGTAAAAACACAACACAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| 3UTR TCA 72 bp | GGCAGTTCACAAATTCTCACCGTTACAACAACCCCATaGGGTATTTATTCCCATTCTATAGATAGGGAAACC | + |
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Preference number: 3 (lower is better) Translates to: GSSQILTVTTTP*GIYSHSIDRET Trigger: GGTTTCCCTATCTATAGAATGGGAATAAATACCTCATGGGGTTGTTGTAACGGTGAGAATTTGTGAACTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| 3UTR-3UTR CAA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTAACCACTTCCCTGTATaGGCTAGGTCTTTCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: TISSSSNCDAEEASFKLCNHFPV*ARSFSF Trigger: GAAAGAGAAAGACCTAGCCAATACAGGGAAGTGGTT...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR GCA 90 bp | AAACTAGAAGGAAAGACTGACACTGCTATCTGCTGGCCTCCAGTGTCCTGGCTCTGTCTCCAGCGCTGCTaGTGCTGCTGCATTACCATG | + |
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Preference number: 4 (lower is better) Translates to: KLEGKTDTAICWPPVSWLCLQRC*CCCITM Trigger: CATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACA...GAGCCAGGACACTGGAGGCCAGCAGATAGCAGTGTCAGTCTTTCCTTCTAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS-3UTR GCA 90 bp | AAACTAGAAGGAAAGACTGACACTGCTATCTGCTGGCCTCCAGTGTCCTGGCTCGCTGCTGCATTACCATaGCCTCATTGTTTTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KLEGKTDTAICWPPVSWLAAALP*PHCFSS Trigger: GGAAGAAAAACAATGAGGGCATGGTAATGCAGCAGC...GAGCCAGGACACTGGAGGCCAGCAGATAGCAGTGTCAGTCTTTCCTTCTAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS-3UTR GCA 90 bp | ATATGCCAACCACTGTACTTGGCAGTTCACAAATTCTCACCGTTACAACAACCCCAATGTCTCCAGCGCTaGTGCTGCTGCTGCATTACC | + |
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Preference number: 4 (lower is better) Translates to: ICQPLYLAVHKFSPLQQPQCLQR*CCCCIT Trigger: GGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTG...GGGTTGTTGTAACGGTGAGAATTTGTGAACTGCCAAGTACAGTGGTTGGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS-3UTR GCA 90 bp | ATATGCCAACCACTGTACTTGGCAGTTCACAAATTCTCACCGTTACAACAACCCACTGACACTGCTATCTaGTGGCCTCCAGTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ICQPLYLAVHKFSPLQQPTDTAI*WPPVSW Trigger: CCAGGACACTGGAGGCCAGCAGATAGCAGTGTCAGT...GGGTTGTTGTAACGGTGAGAATTTGTGAACTGCCAAGTACAGTGGTTGGCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS-3UTR TCA 90 bp | GTTTTTACATACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGAGAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCT | + |
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Preference number: 4 (lower is better) Translates to: VFTYPEVWRQEVKGVGESALSPL*AVGLPP Trigger: AGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGC...ACTCTCACCCACCCCTTTAACCTCTTGTCTCCAGACTTCTGGGTATGTAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS-3UTR GCA 90 bp | TATATGCCAACCACTGTACTTGGCAGTTCACAAATTCTCACCGTTACAACAACCCGCTGCTGCTGCTGCTaGATTACCATGCCCTCATTG | + |
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Preference number: 4 (lower is better) Translates to: YMPTTVLGSSQILTVTTTRCCCC*ITMPSL Trigger: CAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCG...GGTTGTTGTAACGGTGAGAATTTGTGAACTGCCAAGTACAGTGGTTGGCATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS-3UTR TCA 90 bp | GTTGTGTTTTTACATACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGCTGGATAAGCTCCAGTaGCTGTTGAGCCTTATGCAA | + |
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Preference number: 4 (lower is better) Translates to: VVFLHTQKSGDKRLKGWVLDKLQ*LLSLMQ Trigger: TTGCATAAGGCTCAACAGTCACTGGAGCTTATCCAG...CACCCACCCCTTTAACCTCTTGTCTCCAGACTTCTGGGTATGTAAAAACACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS-3UTR TCA 90 bp | ACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGAGAGTTTCATTGATTTGTTGGTTTACCGCCTaGAGCAACTGCTGTAACTGT | + |
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Preference number: 4 (lower is better) Translates to: TQKSGDKRLKGWVRVSLICWFTA*SNCCNC Trigger: ACAGTTACAGCAGTTGCTTCAGGCGGTAAACCAACA...AATCAATGAAACTCTCACCCACCCCTTTAACCTCTTGTCTCCAGACTTCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS-3UTR GCA 90 bp | GTGGGTGAGAGTTTCATTGATTTTAGGGCCAATTCTCCTGCAATTCTTTTGGCCTCACAAGATGGCTGCTaGATCACCAACCATCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VGESFIDFRANSPAILLASQDGC*ITNHRV Trigger: GACACGATGGTTGGTGATGCAGCAGCCATCTTGTGA...GGCCAAAAGAATTGCAGGAGAATTGGCCCTAAAATCAATGAAACTCTCACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS-3UTR GCA 90 bp | TGTTGTGTTGTGTTTTTACATACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGTCACAAGATGGCTaGTGCATCACCAACCATCGT | + |
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Preference number: 4 (lower is better) Translates to: CCVVFLHTQKSGDKRLKGWSQDG*CITNHR Trigger: ACGATGGTTGGTGATGCAGCAGCCATCTTGTGACCA...CCCCTTTAACCTCTTGTCTCCAGACTTCTGGGTATGTAAAAACACAACACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS-3UTR TCA 90 bp | TGCCAACCACTGTACTTGGCAGTTCACAAATTCTCACCGTTACAACAACCCCATAGTAAGTTAGGAAACTaGGCCAAGTATACACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: CQPLYLAVHKFSPLQQPHSKLGN*AKYTQK Trigger: TTTCTGTGTATACTTGGCTCAGTTTCCTAACTTACT...ATGGGGTTGTTGTAACGGTGAGAATTTGTGAACTGCCAAGTACAGTGGTTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS-3UTR CCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTGGCCCTTCAGATTCTTaGCTTAGATGTCAGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCGPSDS*LRCQFL Trigger: GAGGAACTGACATCTAAGCCAAGAATCTGAAGGGCC...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR TCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTGAACTCTCAATCTGTTaGGCCTTTTCAAGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCELSIC*AFSSWT Trigger: TGTCCAGCTTGAAAAGGCTCAACAGATTGAGAGTTC...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR TCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTAGGAGAAGACTTTCCTaGACTCTCAATCTGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCRRRLS*TLNLLS Trigger: GCTCAACAGATTGAGAGTTCAGGAAAGTCTTCTCCT...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR CCA 90 bp | CAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGAGAGTTTCATTGATTTTAAGAAGACTCCGTTTCTaGGGAAACATCACTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: QKSGDKRLKGWVRVSLILRRLRF*GNITIF Trigger: GAAAATAGTGATGTTTCCCCAGAAACGGAGTCTTCT...TAAAATCAATGAAACTCTCACCCACCCCTTTAACCTCTTGTCTCCAGACTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS-3UTR TCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTAAGTTCTTCAAACTGTaGTGCAGAAGAGGCCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCKFFKL*CRRGLF Trigger: AAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTT...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR GCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTCTCCTCTTCTTTAGTTaGCACCTGAATAAGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCLLFFS*HLNKSS Trigger: ACTGGACTTATTCAGGTGGCAACTAAAGAAGAGGAG...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| 3UTR CAA 72 bp | TTGTTTTCATCTTGTACATCCTGTAACAGCTGTGTTTaGCTAGAAAGATCACTCTCCCTCTCTTTTAGCATG | + |
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Preference number: 4 (lower is better) Translates to: LFSSCTSCNSCV*LERSLSLSFSM Trigger: CATGCTAAAAGAGAGGGAGAGTGATCTTTCTAGCAAAACACAGCTGTTACAGGATGTACAAGATGAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR TCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTGAGGCAAAAGAAACCTaGTCATTTTGCTTAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCEAKET*SFCLAF Trigger: AAAAGCTAAGCAAAATGATCAGGTTTCTTTTGCCTC...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR TCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTTCCTGTTTCAAATCCTaGACAGTTTTCTCCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCSCFKS*TVFSLL Trigger: TAACAAGGAGAAAACTGTTCAGGATTTGAAACAGGA...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR GCA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTTTTCAAGTTATGTTGTaGTACTTCCTGAACATGTGC | + |
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Preference number: 4 (lower is better) Translates to: TISSSSNCDAEEASFKLCFQVML*YFLNMC Trigger: GCACATGTTCAGGAAGTAGCACAACATAACTTGAAA...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR CCA 90 bp | TTGTTTGTTTTGTTGTGTTGTGTTTTTACATACCCAGAAGTCTGGAGACAAGAGTTTACTATTTTTGACTaGATAAGCTCCAGTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: LFVLLCCVFTYPEVWRQEFTIFD*ISSSDC Trigger: ACAGTCACTGGAGCTTATCCAGTCAAAAATAGTAAA...CTCTTGTCTCCAGACTTCTGGGTATGTAAAAACACAACACAACAAAACAAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| 3UTR CAA 72 bp | GTTGTTGTTGTTGTTCTGTTTGTTTGTTTTGTTGTGTaGTGTTTTTACATACCCAGAAGTCTGGAGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: VVVVVLFVCFVV*CFYIPRSLETR Trigger: TCTTGTCTCCAGACTTCTGGGTATGTAAAAACACAACACAACAAAACAAACAAACAGAACAACAACAACAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS GCA 90 bp | GTCCTGGCTCTTTTCACACGGGTTCAATGTCTCCAGCGCTGCTGCTaGTGCTGCATTACCATGCCCTCATTGTTTTTCTTCCTCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: VLALFTRVQCLQRCC*CCITMPSLFFFLWC Trigger: ACACCAGAGGAAGAAAAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTGAACCCGTGTGAAAAGAGCCAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS GCA 90 bp | TCCAGTGTCCTGGCTCTTTTCACACGGGTTCAATGTCTCCAGCGCTaGTGCTGCTGCTGCATTACCATGCCCTCATTGTTTTTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSVLALFTRVQCLQR*CCCCITMPSLFFFL Trigger: GAGGAAGAAAAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTGAACCCGTGTGAAAAGAGCCAGGACACTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS GCA 90 bp | TCCATTTTTAGACTTCTTCTGCCCTGGTTTCTTCTTCGAGGCAGCTaGTTCAGAGGGAGGGGTGGGCTGTTTAGTAACTGGGACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SIFRLLLPWFLLRGS*FRGRGGLFSNWDRF Trigger: GAACCTGTCCCAGTTACTAAACAGCCCACCCCTCCCTCTGAAGCAGCTGCCTCGAAGAAGAAACCAGGGCAGAAGAAGTCTAAAAATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS GCA 90 bp | CACGGGTTCAATGTCTCCAGCGCTGCTGCTGCTGCTGCATTACCATaGCCTCATTGTTTTTCTTCCTCTGGTGTTCAACTGCATCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HGFNVSSAAAAAALP*PHCFSSSGVQLHPS Trigger: TGAAGGATGCAGTTGAACACCAGAGGAAGAAAAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTGAACCCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS TCA 90 bp | CACCAACCATCGTGTCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTAACTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: HQPSCLTPGSALSPL*AVGLPPEATAVTVL Trigger: TAACACAGTTACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGACACGATGGTTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS-3UTR CAA 90 bp | TTACATACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGAGAGTTTCACTCCTTTGTGAGCTGTaGGTTTACCGCCTGAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LHTQKSGDKRLKGWVRVSLLCEL*VYRLKQ Trigger: TTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAG...TGAAACTCTCACCCACCCCTTTAACCTCTTGTCTCCAGACTTCTGGGTATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS TCA 90 bp | CAGAGGATGATCACTCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTAACTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: QRMITLTPGSALSPL*AVGLPPEATAVTVL Trigger: TAACACAGTTACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGAGTGATCATCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000459737.5 |
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| CDS TCA 90 bp | ACTGTCAACCACCCACTTGCCAAACTTGGACTTATGTTTATCAGCTaGCAAAAGAATGTTGTGCTATCAGTTAGGAGGGGAGCTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: TVNHPLAKLGLMFIS*QKNVVLSVRRGAAC Trigger: GCAGGCAGCTCCCCTCCTAACTGATAGCACAACATTCTTTTGTCAGCTGATAAACATAAGTCCAAGTTTGGCAAGTGGGTGGTTGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 90 bp | CCCAATTACTTCACTCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTAACTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: PNYFTLTPGSALSPL*AVGLPPEATAVTVL Trigger: TAACACAGTTACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGAGTGAAGTAATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000334975.13 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000554507.5 ENST00000555172.5 ENST00000555573.5 ENST00000556631.1 |
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| CDS TCA 90 bp | TTCAGTTGTCCTTACCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTAACTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: FSCPYLTPGSALSPL*AVGLPPEATAVTVL Trigger: TAACACAGTTACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGGTAAGGACAACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS GCA 90 bp | GGAGGTAAAAGAAGATTGCTTATATGCGTGCCATGTACTGATAAGTaGTATGGAGAGATGTTGGGTACATCAGGCCTCATTATGCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: GGKRRLLICVPCTDK*YGEMLGTSGLIMLV Trigger: GACGAGCATAATGAGGCCTGATGTACCCAACATCTCTCCATAGCACTTATCAGTACATGGCACGCATATAAGCAATCTTCTTTTACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS GCA 90 bp | CTAGGGAATGCAAGGTGGGAGGTAAAAGAAGATTGCTTATATGCGTaGCATGTACTGATAAGTGCTATGGAGAGATGTTGGGTACATCAG | + |
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Preference number: 5 (lower is better) Translates to: LGNARWEVKEDCLYA*HVLISAMERCWVHQ Trigger: CTGATGTACCCAACATCTCTCCATAGCACTTATCAGTACATGGCACGCATATAAGCAATCTTCTTTTACCTCCCACCTTGCATTCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS CCA 90 bp | GAAGCTTTCTTCTTCCCTGATCCACTTTCTTGTTTAGTCTCTTGGTaGAGGGGCAATGCTTCTTGCCTTTTTGATGGTACCATGAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EAFFFPDPLSCLVSW*RGNASCLFDGTMRV Trigger: AACTCTCATGGTACCATCAAAAAGGCAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAAGAAAGTGGATCAGGGAAGAAGAAAGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CCA 90 bp | GATGAAGCTTTCTTCTTCCCTGATCCACTTTCTTGTTTAGTCTCTTaGTGGAGGGGCAATGCTTCTTGCCTTTTTGATGGTACCATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DEAFFFPDPLSCLVS*WRGNASCLFDGTMR Trigger: TCTCATGGTACCATCAAAAAGGCAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAAGAAAGTGGATCAGGGAAGAAGAAAGCTTCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CCA 90 bp | TGCTGCTGCTGCTGCATTACCATGCCCTCATTGTTTTTCTTCCTCTaGTGTTCAACTGCATCCTTCAAAGAATCTAACTCATTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCITMPSLFFFL*CSTASFKESNSFQR Trigger: TCTCTGGAATGAGTTAGATTCTTTGAAGGATGCAGTTGAACACCAGAGGAAGAAAAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS-3UTR CAA 90 bp | GTTGTGTTTTTACATACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGTGGGTGAGAGTTTCATaGATTTTAGGGCCAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VVFLHTQKSGDKRLKGWVWVRVS*ILGPIL Trigger: GAGAATTGGCCCTAAAATCAATGAAACTCTCACCCA...CACCCACCCCTTTAACCTCTTGTCTCCAGACTTCTGGGTATGTAAAAACACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000554294.1 |
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| CDS CCA 90 bp | CTAACACACAGGGTGGTTGTGAAGATTAAAGGAGTTGCCACATGTTaGAAGCATGCTTATGCTAACAGGCATACTCATGAAGTATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTHRVVVKIKGVATC*KHAYANRHTHEVSA Trigger: AGCTGATACTTCATGAGTATGCCTGTTAGCATAAGCATGCTTCCAACATGTGGCAACTCCTTTAATCTTCACAACCACCCTGTGTGTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 90 bp | TGCCTGGTGGGCCTCTATTTTCATAACAATCCAGCCTATCATTCATaGTATAATACTGTCAACCACCCACTTGCCAAACTTGGACTTATG | + |
|
Preference number: 5 (lower is better) Translates to: CLVGLYFHNNPAYHS*YNTVNHPLAKLGLM Trigger: CATAAGTCCAAGTTTGGCAAGTGGGTGGTTGACAGTATTATATCATGAATGATAGGCTGGATTGTTATGAAAATAGAGGCCCACCAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554831.1 |
||
| CDS-3UTR CAA 90 bp | TTTTTACATACCCAGAAGTCTGGAGACAAGAGGTTAAAGGGGTGGGTGAGAGTTTTAGACTTACAGACATaGTCTCCTTCTCAGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FLHTQKSGDKRLKGWVRVLDLQT*SPSQKT Trigger: AGTCTTCTGAGAAGGAGACAATGTCTGTAAGTCTAA...AACTCTCACCCACCCCTTTAACCTCTTGTCTCCAGACTTCTGGGTATGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000554294.1 |
||
| CDS TCA 90 bp | TGGATGGTTTCTCCACATGTCAATAAAGTGTTTTCAGTGCCTACTTaGTACCCAGTGGAGGACAAGCTTCTTACCAAATTTAGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WMVSPHVNKVFSVPT*YPVEDKLLTKFSSS Trigger: TGAAGAGCTAAATTTGGTAAGAAGCTTGTCCTCCACTGGGTATCAAGTAGGCACTGAAAACACTTTATTGACATGTGGAGAAACCATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555506.1 ENST00000556631.1 |
||
| CDS GCA 90 bp | CAAATCCTGAACAGTTTTCTCCTTGTTAGCAACTTTGAGAAGTTCTaGCTCCAGAAGCTCTTCTACAGACTTGATCTTTCCATCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QILNSFLLVSNFEKF*LQKLFYRLDLSIFL Trigger: GAGAAAGATGGAAAGATCAAGTCTGTAGAAGAGCTTCTGGAGGCAGAACTTCTCAAAGTTGCTAACAAGGAGAAAACTGTTCAGGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000395314.8 ENST00000438792.6 ENST00000459737.5 ENST00000553360.5 ENST00000554507.5 ENST00000554890.1 |
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| CDS-3UTR CAA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTTCCTTGTTAGCAACTTaGAGAAGTTCTGCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TISSSSNCDAEEASFKLCSLLAT*RSSASR Trigger: TCTGGAGGCAGAACTTCTCAAAGTTGCTAACAAGGA...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
||
| CDS-3UTR CAA 90 bp | GTATACACAGAAAACGAAGTGGCAAAACTAGAAGGAAAGACTGACACTGCTATCATTACCATGCCCTCATaGTTTTTCTTCCTCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VYTENEVAKLEGKTDTAIITMPS*FFFLWC Trigger: ACACCAGAGGAAGAAAAACAATGAGGGCATGGTAAT...GATAGCAGTGTCAGTCTTTCCTTCTAGTTTTGCCACTTCGTTTTCTGTGTATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000554570.1 |
||
| CDS TCA 90 bp | TGGGAAACTGGAGAAGTCAGCTTACCAAGGATAAAAGATTTGAGCTaGGGCTTAATTACTTTTGTTGATATGTTGAAGAATGAGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WETGEVSLPRIKDLS*GLITFVDMLKNELG Trigger: GCCCAGCTCATTCTTCAACATATCAACAAAAGTAATTAAGCCTCAGCTCAAATCTTTTATCCTTGGTAAGCTGACTTCTCCAGTTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554831.1 |
||
| CDS GCA 90 bp | GCAAGGACGGATTTGTATTTTTCACACTCTAGCTGTAACAATGTGTaGATTTCATCAGCTTCTTTCAACTTGTGCTCTAGAACCTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: ARTDLYFSHSSCNNV*ISSASFNLCSRTLT Trigger: GGTTAAGGTTCTAGAGCACAAGTTGAAAGAAGCTGATGAAATGCACACATTGTTACAGCTAGAGTGTGAAAAATACAAATCCGTCCTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000334975.13 ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 ENST00000553624.5 ENST00000554507.5 ENST00000555172.5 ENST00000555573.5 |
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| CDS GCA 90 bp | AAAAAGCCTGGATGGTTTCTCCACATGTCAATAAAGTGTTTTCAGTaGCTACTTGATACCCAGTGGAGGACAAGCTTCTTACCAAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: KKPGWFLHMSIKCFQ*LLDTQWRTSFLPNL Trigger: TAAATTTGGTAAGAAGCTTGTCCTCCACTGGGTATCAAGTAGGCACTGAAAACACTTTATTGACATGTGGAGAAACCATCCAGGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555506.1 ENST00000556631.1 |
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| CDS CCA 90 bp | GCTCTGATGTTTGAGTTCCTTCAAAATAATCTAGGGAATGCAAGGTaGGAGGTAAAAGAAGATTGCTTATATGCGTGCCATGTACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: ALMFEFLQNNLGNAR*EVKEDCLYACHVLI Trigger: TATCAGTACATGGCACGCATATAAGCAATCTTCTTTTACCTCCCACCTTGCATTCCCTAGATTATTTTGAAGGAACTCAAACATCAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334975.13 |
||
| CDS CCA 90 bp | GCATTGTGTCAAAACGACTTGGTAACAAACCTAAATAAGTTCCAATaGGCCAAAGGAAGACAAGCAGACATTACGAATCTCCTCATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALCQNDLVTNLNKFQ*AKGRQADITNLLMK Trigger: TTTCATGAGGAGATTCGTAATGTCTGCTTGTCTTCCTTTGGCCCATTGGAACTTATTTAGGTTTGTTACCAAGTCGTTTTGACACAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS CCA 90 bp | GTACCTGTTGTCTTTCTGCTTCCTACACCTGAAGAAACAACAACTTaGCACCATTATTGGTTTCTGCTTTTATACGCTCAATCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPVVFLLPTPEETTT*HHYWFLLLYAQSFP Trigger: AGGAAAAGATTGAGCGTATAAAAGCAGAAACCAATAATGGTGCCAAGTTGTTGTTTCTTCAGGTGTAGGAAGCAGAAAGACAACAGGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554507.5 ENST00000554890.1 |
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| CDS-3UTR CAA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTTGTAACAGCTGTGTTTaGCTAGAAAGATCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TISSSSNCDAEEASFKLCCNSCV*LERSLS Trigger: GGAGAGTGATCTTTCTAGCAAAACACAGCTGTTACA...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR CAA 90 bp | GAAACTGAGCCAAGTATACACAGAAAACGAAGTGGCAAAACTAGAAGGAAAGACTGCCTGTTGGTAGTTTaGTTGTTTAAGCTGCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ETEPSIHRKRSGKTRRKDCLLVV*LFKLLN Trigger: ATTGAGCAGCTTAAACAACAAAACTACCAACAGGCA...GTCTTTCCTTCTAGTTTTGCCACTTCGTTTTCTGTGTATACTTGGCTCAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554570.1 |
||
| CDS-3UTR CAA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTAGCTCTTCTACAGACTaGATCTTTCCATCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TISSSSNCDAEEASFKLCSSSTD*IFPSFS Trigger: TGAGAAAGATGGAAAGATCAAGTCTGTAGAAGAGCT...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR CAA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTTGCCTGTTGGTAGTTTaGTTGTTTAAGCTGCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TISSSSNCDAEEASFKLCCLLVV*LFKLLN Trigger: ATTGAGCAGCTTAAACAACAAAACTACCAACAGGCA...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS CCA 90 bp | CTAAACTTTTTAAGCACTGACATGACACTCAAAGGAAATGTTCACTaGAGCATTTCAGATTTCGGATTTTCAGATAAGGGACACATACAG | + |
|
Preference number: 5 (lower is better) Translates to: LNFLSTDMTLKGNVH*SISDFGFSDKGHIQ Trigger: CTGTATGTGTCCCTTATCTGAAAATCCGAAATCTGAAATGCTCCAGTGAACATTTCCTTTGAGTGTCATGTCAGTGCTTAAAAAGTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556631.1 |
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| CDS-3UTR CAA 90 bp | ACAATCTCAAGTTCTTCAAACTGTGATGCAGAAGAGGCCTCTTTCAAGTTATGTCTGTTGGTAGTTTTGTaGTTTAAGCTGCTCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TISSSSNCDAEEASFKLCLLVVL*FKLLNL Trigger: CAAATTGAGCAGCTTAAACAACAAAACTACCAACAG...ACATAACTTGAAAGAGGCCTCTTCTGCATCACAGTTTGAAGAACTTGAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS-3UTR CAA 90 bp | AATATATGCCAACCACTGTACTTGGCAGTTCACAAATTCTCACCGTTACAACAACTGTTGGTAGTTTTGTaGTTTAAGCTGCTCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: NICQPLYLAVHKFSPLQQLLVVL*FKLLNL Trigger: CAAATTGAGCAGCTTAAACAACAAAACTACCAACAG...TTGTTGTAACGGTGAGAATTTGTGAACTGCCAAGTACAGTGGTTGGCATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS TCA 90 bp | TTTGCATCATTCTTTGATTATGCTGATACCTCTAGGACTGAAGAATaGATGGGACTGCTAACAGTTATTATGTACAGTGGATTAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FASFFDYADTSRTEE*MGLLTVIMYSGLAN Trigger: ATTGGCTAATCCACTGTACATAATAACTGTTAGCAGTCCCATTCATTCTTCAGTCCTAGAGGTATCAGCATAATCAAAGAATGATGCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000554831.1 ENST00000556631.1 |
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| CDS TCA 90 bp | AGGTTTAAGCAAATCAATAACCTCTCTCTTATCTACCACAGGACTTaGGTCAGCATTATCCATCAAAGGAATATAAGTAGTTGCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RFKQINNLSLIYHRT*VSIIHQRNISSCMN Trigger: ATTCATGCAACTACTTATATTCCTTTGATGGATAATGCTGACTCAAGTCCTGTGGTAGATAAGAGAGAGGTTATTGATTTGCTTAAACCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS TCA 90 bp | ACTGGCCTGTATTATACCATCAAGAAATGCTTTACGATATACCTATaGATAACCCAATCTGTCAAAACAGAAAGTTCTGTAACTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TGLYYTIKKCFTIYL*ITQSVKTESSVTPM Trigger: CATTGGAGTTACAGAACTTTCTGTTTTGACAGATTGGGTTATTCATAGGTATATCGTAAAGCATTTCTTGATGGTATAATACAGGCCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554831.1 ENST00000556631.1 |
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| CDS GCA 90 bp | GATCTCCTTATGATAGCCCATGTTTTGTATGCTACTCGGAAGCTCTaGCACAAACAACTTATACTGAAATATCACTGTTATAAACTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: DLLMIAHVLYATRKL*HKQLILKYHCYKLN Trigger: ATTAAGTTTATAACAGTGATATTTCAGTATAAGTTGTTTGTGGCAGAGCTTCCGAGTAGCATACAAAACATGGGCTATCATAAGGAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555506.1 ENST00000556631.1 |
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| CDS CAA 72 bp | AAAGCCATTGACTGGTACCTGTCCACAGTCCAGGAATaGGGGACCCCCGCTCCATACCTCTCAACACAACCC | + |
|
Preference number: 6 (lower is better) Translates to: KAIDWYLSTVQE*GTPAPYLSTQP Trigger: GGGTTGTGTTGAGAGGTATGGAGCGGGGGTCCCCAATTCCTGGACTGTGGACAGGTACCAGTCAATGGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 72 bp | TACGAATCTCCTCATGAAAGTGCACACCACCGCCCATaGAGTGGTCTTGCCCCTACTCTACCCTACCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YESPHESAHHRP*SGLAPTLPYPQ Trigger: TTGGGGGTAGGGTAGAGTAGGGGCAAGACCACTTCATGGGCGGTGGTGTGCACTTTCATGAGGAGATTCGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS TCA 72 bp | ATCTCCTGCTGTGTGGCCTGGTTCCTAAAAAGCCATTaGCTGGTACCTGTCCACAGTCCAGGAATTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISCCVAWFLKSH*LVPVHSPGIGD Trigger: GTCCCCAATTCCTGGACTGTGGACAGGTACCAGTCAATGGCTTTTTAGGAACCAGGCCACACAGCAGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS GCA 72 bp | CTGGCTCTTTTCACACGGGTTCAATGTCTCCAGCGCTaGTGCTGCTGCTGCATTACCATGCCCTCATTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LALFTRVQCLQR*CCCCITMPSLF Trigger: AAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTGAACCCGTGTGAAAAGAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS CAA 72 bp | CATCTCCTGCTGTGTGGCCTGGTTCCTAAAAAGCCATaGACTGGTACCTGTCCACAGTCCAGGAATTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLLLCGLVPKKP*TGTCPQSRNWG Trigger: TCCCCAATTCCTGGACTGTGGACAGGTACCAGTCAATGGCTTTTTAGGAACCAGGCCACACAGCAGGAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS GCA 72 bp | TTCACACGGGTTCAATGTCTCCAGCGCTGCTGCTGCTaGTGCATTACCATGCCCTCATTGTTTTTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FTRVQCLQRCCC*CITMPSLFFFL Trigger: GAGGAAGAAAAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTGAACCCGTGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS GCA 72 bp | GCTCTTTTCACACGGGTTCAATGTCTCCAGCGCTGCTaGTGCTGCTGCATTACCATGCCCTCATTGTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALFTRVQCLQRC*CCCITMPSLFF Trigger: GAAAAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTGAACCCGTGTGAAAAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS CCA 72 bp | GCAAAACTAGAAGGAAAGACTGACACTGCTATCTGCTaGCCTCCAGTGTCCTGGCTCTTTTCACACGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AKLEGKTDTAIC*PPVSWLFSHGF Trigger: GAACCCGTGTGAAAAGAGCCAGGACACTGGAGGCCAGCAGATAGCAGTGTCAGTCTTTCCTTCTAGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554570.1 |
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| CDS TCA 72 bp | CCAAAGGAAGACAAGCAGACATTACGAATCTCCTCATaGAAGTGCACACCACCGCCCATGAAGTGGTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PKEDKQTLRISS*KCTPPPMKWSC Trigger: GCAAGACCACTTCATGGGCGGTGGTGTGCACTTTCATGAGGAGATTCGTAATGTCTGCTTGTCTTCCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS TCA 72 bp | TTCCACAGATGGGTGAGTGCGGGGATGGTTTCAGGATaGAACTGTTCCACCTCAGATCATCAGGCATTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FHRWVSAGMVSG*NCSTSDHQALD Trigger: ATCTAATGCCTGATGATCTGAGGTGGAACAGTTTCATCCTGAAACCATCCCCGCACTCACCCATCTGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554831.1 |
||
| CDS TCA 72 bp | CCTTACCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PYLTPGSALSPL*AVGLPPEATAV Trigger: TACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGGTAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554831.1 |
||
| CDS TCA 72 bp | TCGTGTCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SCLTPGSALSPL*AVGLPPEATAV Trigger: TACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGACACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554294.1 |
||
| CDS CAA 72 bp | AGCAATACCCAACCGTTTTGGCACCAGGGACCAGTTTaGTGGAAGACAATTTTTCCACAGATGGGTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SNTQPFWHQGPV*WKTIFPQMGEC Trigger: GCACTCACCCATCTGTGGAAAAATTGTCTTCCACAAAACTGGTCCCTGGTGCCAAAACGGTTGGGTATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
||
| CDS CAA 90 bp | GAGGGAGGGGTGGGCTGTTTAGTAACTGGGACAGGTTCTACTTTTTaGCCAGGAATCTTTGATGCGTCACTTTCTTTGATGACCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGGVGCLVTGTGSTF*PGIFDASLSLMTCS Trigger: AGAGCAGGTCATCAAAGAAAGTGACGCATCAAAGATTCCTGGCAAAAAAGTAGAACCTGTCCCAGTTACTAAACAGCCCACCCCTCCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
||
| CDS CAA 90 bp | CAATGTCTCCAGCGCTGCTGCTGCTGCTGCATTACCATGCCCTCATaGTTTTTCTTCCTCTGGTGTTCAACTGCATCCTTCAAAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: QCLQRCCCCCITMPS*FFFLWCSTASFKES Trigger: AGATTCTTTGAAGGATGCAGTTGAACACCAGAGGAAGAAAAACAATGAGGGCATGGTAATGCAGCAGCAGCAGCAGCGCTGGAGACATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554570.1 |
||
| CDS CAA 90 bp | GGCAACACACAAAAACCCAGGCAGCCAAGTTACAAGAGAGTCTGTTaGATACAAAGGTCAAAGGAGGCACAGATAACCCCTCCAAGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: GNTQKPRQPSYKRVC*IQRSKEAQITPPSY Trigger: GTAGCTTGGAGGGGTTATCTGTGCCTCCTTTGACCTTTGTATCAAACAGACTCTCTTGTAACTTGGCTGCCTGGGTTTTTGTGTGTTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
||
| CDS CAA 90 bp | TCTAGCTCCAGAGTCTATACTCTAGGCCAGCAATACCCAACCGTTTaGGCACCAGGGACCAGTTTTGTGGAAGACAATTTTTCCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSRVYTLGQQYPTV*APGTSFVEDNFSTD Trigger: ATCTGTGGAAAAATTGTCTTCCACAAAACTGGTCCCTGGTGCCAAAACGGTTGGGTATTGCTGGCCTAGAGTATAGACTCTGGAGCTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 72 bp | TTCACTCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FTLTPGSALSPL*AVGLPPEATAV Trigger: TACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000334975.13 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000554507.5 ENST00000555172.5 ENST00000555573.5 ENST00000556631.1 |
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| CDS TCA 72 bp | ATCACTCTAACACCTGGTAGTGCTCTTTCTCCTTTGTaGGCTGTTGGTTTACCGCCTGAAGCAACTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ITLTPGSALSPL*AVGLPPEATAV Trigger: TACAGCAGTTGCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGGTGTTAGAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000459737.5 |
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| CDS TCA 72 bp | TGTGTCAAGGTAGGCCAGAGGATGATCACTCTAAAGTaGGACAAAACGCTCCTAACACCTGGTAGTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CVKVGQRMITLK*DKTLLTPGSAL Trigger: AAGAGCACTACCAGGTGTTAGGAGCGTTTTGTCTCACTTTAGAGTGATCATCCTCTGGCCTACCTTGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553710.1 |
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| CDS CAA 72 bp | TGCGTGCCATGTACTGATAAGTGCTATGGAGAGATGTaGGGTACATCAGGCCTCATTATGCTCGTCTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: CVPCTDKCYGEM*GTSGLIMLVSL Trigger: TAGAGAGACGAGCATAATGAGGCCTGATGTACCCAACATCTCTCCATAGCACTTATCAGTACATGGCACGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS TCA 72 bp | TGGCTTAGATGTCAGTTCCTCAGGAGAAGACTTTCCTaGACTCTCAATCTGTTGAGCCTTTTCAAGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: WLRCQFLRRRLS*TLNLLSLFKLD Trigger: GTCCAGCTTGAAAAGGCTCAACAGATTGAGAGTTCAGGAAAGTCTTCTCCTGAGGAACTGACATCTAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553360.5 |
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| CDS GCA 72 bp | AAGAATGTTGTGCTATCAGTTAGGAGGGGAGCTGCCTaGCAACTGCGTTGTGAGGGTATACAGACATATTTT | + |
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Preference number: 6 (lower is better) Translates to: KNVVLSVRRGAA*QLRCEGIQTYF Trigger: AAAATATGTCTGTATACCCTCACAACGCAGTTGGCAGGCAGCTCCCCTCCTAACTGATAGCACAACATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS CCA 72 bp | TTCTTCCCTGATCCACTTTCTTGTTTAGTCTCTTGGTaGAGGGGCAATGCTTCTTGCCTTTTTGATGGTACC | + |
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Preference number: 6 (lower is better) Translates to: FFPDPLSCLVSW*RGNASCLFDGT Trigger: GGTACCATCAAAAAGGCAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAAGAAAGTGGATCAGGGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CAA 72 bp | GGTCTGGGCTGCTATCTGGGAATGGAACTGCTGAATTaGAGCTTTCAAAGCCTCATTCTGCTCCAAAATATC | + |
|
Preference number: 6 (lower is better) Translates to: GLGCYLGMELLN*SFQSLILLQNI Trigger: GATATTTTGGAGCAGAATGAGGCTTTGAAAGCTCAAATTCAGCAGTTCCATTCCCAGATAGCAGCCCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CAA 72 bp | AGAGTCTATACTCTAGGCCAGCAATACCCAACCGTTTaGGCACCAGGGACCAGTTTTGTGGAAGACAATTTT | + |
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Preference number: 6 (lower is better) Translates to: RVYTLGQQYPTV*APGTSFVEDNF Trigger: AAAATTGTCTTCCACAAAACTGGTCCCTGGTGCCAAAACGGTTGGGTATTGCTGGCCTAGAGTATAGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS CAA 72 bp | CAAAAACCCAGGCAGCCAAGTTACAAGAGAGTCTGTTaGATACAAAGGTCAAAGGAGGCACAGATAACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QKPRQPSYKRVC*IQRSKEAQITP Trigger: AGGGGTTATCTGTGCCTCCTTTGACCTTTGTATCAAACAGACTCTCTTGTAACTTGGCTGCCTGGGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 72 bp | AATTATCAATGTCAATGCCAGGTAGAGCCTAAGGAATaGAGAAGTTCGAGAGTGCCTGGTGGGCCTCTATTT | + |
|
Preference number: 6 (lower is better) Translates to: NYQCQCQVEPKE*RSSRVPGGPLF Trigger: AAATAGAGGCCCACCAGGCACTCTCGAACTTCTTCATTCCTTAGGCTCTACCTGGCATTGACATTGATAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS GCA 72 bp | TCTTGTTTAGTCTCTTGGTGGAGGGGCAATGCTTCTTaGCTTTTTGATGGTACCATGAGAGTTTCCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SCLVSWWRGNAS*LFDGTMRVSTF Trigger: AAAGGTGGAAACTCTCATGGTACCATCAAAAAGGCAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CCA 72 bp | TTCTTCTTCCCTGATCCACTTTCTTGTTTAGTCTCTTaGTGGAGGGGCAATGCTTCTTGCCTTTTTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: FFFPDPLSCLVS*WRGNASCLFDG Trigger: ACCATCAAAAAGGCAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAAGAAAGTGGATCAGGGAAGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CAA 72 bp | AACTTGGACTTATGTTTATCAGCTGACAAAAGAATGTaGTGCTATCAGTTAGGAGGGGAGCTGCCTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NLDLCLSADKRM*CYQLGGELPAN Trigger: GTTGGCAGGCAGCTCCCCTCCTAACTGATAGCACAACATTCTTTTGTCAGCTGATAAACATAAGTCCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 72 bp | CACCCACTTGCCAAACTTGGACTTATGTTTATCAGCTaGCAAAAGAATGTTGTGCTATCAGTTAGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPLAKLGLMFIS*QKNVVLSVRRG Trigger: TCCCCTCCTAACTGATAGCACAACATTCTTTTGTCAGCTGATAAACATAAGTCCAAGTTTGGCAAGTGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 72 bp | CTGATTAAGAACACAAGCCCTGTACCCAAATTACCTTaGTTTAAACCCCAGCTCGCCCATTTATTAGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: LIKNTSPVPKLP*FKPQLAHLLAV Trigger: TACGGCTAATAAATGGGCGAGCTGGGGTTTAAATCAAGGTAATTTGGGTACAGGGCTTGTGTTCTTAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS GCA 72 bp | GAATGCAAGGTGGGAGGTAAAAGAAGATTGCTTATATaGGTGCCATGTACTGATAAGTGCTATGGAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: ECKVGGKRRLLI*VPCTDKCYGEM Trigger: CATCTCTCCATAGCACTTATCAGTACATGGCACGCATATAAGCAATCTTCTTTTACCTCCCACCTTGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS GCA 72 bp | GGATGGTTTCTCCACATGTCAATAAAGTGTTTTCAGTaGCTACTTGATACCCAGTGGAGGACAAGCTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GWFLHMSIKCFQ*LLDTQWRTSFL Trigger: TAAGAAGCTTGTCCTCCACTGGGTATCAAGTAGGCACTGAAAACACTTTATTGACATGTGGAGAAACCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555506.1 ENST00000556631.1 |
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| CDS CCA 72 bp | CATAGTAACCCACTGTGTCCTATGTCTTTCTTGGCATaGCCAAACATTCATGCCACAAAACAACCTTACATG | + |
|
Preference number: 6 (lower is better) Translates to: HSNPLCPMSFLA*PNIHATKQPYM Trigger: CATGTAAGGTTGTTTTGTGGCATGAATGTTTGGCCATGCCAAGAAAGACATAGGACACAGTGGGTTACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555172.5 |
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| CDS CCA 72 bp | AGGGTGGTTGTGAAGATTAAAGGAGTTGCCACATGTTaGAAGCATGCTTATGCTAACAGGCATACTCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVVVKIKGVATC*KHAYANRHTHE Trigger: TTCATGAGTATGCCTGTTAGCATAAGCATGCTTCCAACATGTGGCAACTCCTTTAATCTTCACAACCACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS CAA 72 bp | GTGGGCTGTTTAGTAACTGGGACAGGTTCTACTTTTTaGCCAGGAATCTTTGATGCGTCACTTTCTTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: VGCLVTGTGSTF*PGIFDASLSLM Trigger: CATCAAAGAAAGTGACGCATCAAAGATTCCTGGCAAAAAAGTAGAACCTGTCCCAGTTACTAAACAGCCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CAA 90 bp | GCAACTGCTGTAACTGTGTTACAGTCTGATTTAGACTTACAGACATaGTCTCCTTCTCAGAAGACTCCGTTTCTGGGGAAACATCACTAT | + |
|
Preference number: 6 (lower is better) Translates to: ATAVTVLQSDLDLQT*SPSQKTPFLGKHHY Trigger: ATAGTGATGTTTCCCCAGAAACGGAGTCTTCTGAGAAGGAGACAATGTCTGTAAGTCTAAATCAGACTGTAACACAGTTACAGCAGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000334975.13 ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 ENST00000554294.1 ENST00000554507.5 ENST00000555172.5 ENST00000555573.5 ENST00000556631.1 |
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| CDS CAA 72 bp | GTAACTGTGTTACAGTCTGATTTAGACTTACAGACATaGTCTCCTTCTCAGAAGACTCCGTTTCTGGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VTVLQSDLDLQT*SPSQKTPFLGK Trigger: TTTCCCCAGAAACGGAGTCTTCTGAGAAGGAGACAATGTCTGTAAGTCTAAATCAGACTGTAACACAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000334975.13 ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 ENST00000554294.1 ENST00000554507.5 ENST00000555172.5 ENST00000555573.5 ENST00000556631.1 |
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| CDS CCA 72 bp | CAAAACGACTTGGTAACAAACCTAAATAAGTTCCAATaGGCCAAAGGAAGACAAGCAGACATTACGAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: QNDLVTNLNKFQ*AKGRQADITNL Trigger: GAGATTCGTAATGTCTGCTTGTCTTCCTTTGGCCCATTGGAACTTATTTAGGTTTGTTACCAAGTCGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS CCA 72 bp | TTTAAGGCTTCACTAAGGGGTAGTACAAGACCACACTaGCCTGTATTATACCATCAAGAAATGCTTTACGAT | + |
|
Preference number: 6 (lower is better) Translates to: FKASLRGSTRPH*PVLYHQEMLYD Trigger: ATCGTAAAGCATTTCTTGATGGTATAATACAGGCCAGTGTGGTCTTGTACTACCCCTTAGTGAAGCCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554831.1 ENST00000556631.1 |
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| CDS CCA 72 bp | GTCTTTCTGCTTCCTACACCTGAAGAAACAACAACTTaGCACCATTATTGGTTTCTGCTTTTATACGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VFLLPTPEETTT*HHYWFLLLYAQ Trigger: TTGAGCGTATAAAAGCAGAAACCAATAATGGTGCCAAGTTGTTGTTTCTTCAGGTGTAGGAAGCAGAAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554507.5 ENST00000554890.1 |
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| CDS CAA 72 bp | GAGTTTAAGATTGATCTCCTTATGATAGCCCATGTTTaGTATGCTACTCGGAAGCTCTGCCACAAACAACTT | + |
|
Preference number: 6 (lower is better) Translates to: EFKIDLLMIAHV*YATRKLCHKQL Trigger: AAGTTGTTTGTGGCAGAGCTTCCGAGTAGCATACAAAACATGGGCTATCATAAGGAGATCAATCTTAAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555506.1 ENST00000556631.1 |
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| CDS CCA 72 bp | TTTGAGTTCCTTCAAAATAATCTAGGGAATGCAAGGTaGGAGGTAAAAGAAGATTGCTTATATGCGTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FEFLQNNLGNAR*EVKEDCLYACH Trigger: ATGGCACGCATATAAGCAATCTTCTTTTACCTCCCACCTTGCATTCCCTAGATTATTTTGAAGGAACTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS CCA 72 bp | TTAAGCACTGACATGACACTCAAAGGAAATGTTCACTaGAGCATTTCAGATTTCGGATTTTCAGATAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSTDMTLKGNVH*SISDFGFSDKG Trigger: TCCCTTATCTGAAAATCCGAAATCTGAAATGCTCCAGTGAACATTTCCTTTGAGTGTCATGTCAGTGCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556631.1 |
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| CDS CAA 72 bp | CTGCTCACGAACTTGCTGAAACTTCATCTGCATCTGTaGAGTCTCTTGATAACTGACATGTATTTTGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLTNLLKLHLHL*SLLITDMYFVL Trigger: CAAAACAAAATACATGTCAGTTATCAAGAGACTCAACAGATGCAGATGAAGTTTCAGCAAGTTCGTGAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS CAA 90 bp | AAGCATAGAAGCTATCAAAGTTTAGCAGCATTGTGTCAAAACGACTaGGTAACAAACCTAAATAAGTTCCAATGGGCCAAAGGAAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: KHRSYQSLAALCQND*VTNLNKFQWAKGRQ Trigger: TTGTCTTCCTTTGGCCCATTGGAACTTATTTAGGTTTGTTACCAAGTCGTTTTGACACAATGCTGCTAAACTTTGATAGCTTCTATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS CAA 90 bp | CCTATCATTCATGATATAATACTGTCAACCACCCACTTGCCAAACTaGGACTTATGTTTATCAGCTGACAAAAGAATGTTGTGCTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: PIIHDIILSTTHLPN*DLCLSADKRMLCYQ Trigger: CTGATAGCACAACATTCTTTTGTCAGCTGATAAACATAAGTCCAAGTTTGGCAAGTGGGTGGTTGACAGTATTATATCATGAATGATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS TCA 72 bp | TTCTTTGATTATGCTGATACCTCTAGGACTGAAGAATaGATGGGACTGCTAACAGTTATTATGTACAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FFDYADTSRTEE*MGLLTVIMYSG Trigger: TCCACTGTACATAATAACTGTTAGCAGTCCCATTCATTCTTCAGTCCTAGAGGTATCAGCATAATCAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000554831.1 ENST00000556631.1 |
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| CDS GCA 72 bp | CTTTTCTGCTCTGATTCCATTAACTGCATTAGTCTTTaGTCCAACTGTTGTTTTGATACCAAGGTATCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LFCSDSINCISL*SNCCFDTKVSV Trigger: TACAGATACCTTGGTATCAAAACAACAGTTGGAGCAAAGACTAATGCAGTTAATGGAATCAGAGCAGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 ENST00000554567.1 |
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| CDS GCA 72 bp | ATGATAGCCCATGTTTTGTATGCTACTCGGAAGCTCTaGCACAAACAACTTATACTGAAATATCACTGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: MIAHVLYATRKL*HKQLILKYHCY Trigger: ATAACAGTGATATTTCAGTATAAGTTGTTTGTGGCAGAGCTTCCGAGTAGCATACAAAACATGGGCTATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555506.1 ENST00000556631.1 |
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| CDS CCA 72 bp | GGACAGGATATTTTCAAGAAAGATGACTTTCGGAGATaGACCTTATACATTTTTGTTCTTTACACAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GQDIFKKDDFRR*TLYIFVLYTGH Trigger: GTGACCTGTGTAAAGAACAAAAATGTATAAGGTCCATCTCCGAAAGTCATCTTTCTTGAAAATATCCTGTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554831.1 |
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| CDS CAA 72 bp | TTCTGTAAAATTCCTTCTGTTTCTGCAAGGACGGATTaGTATTTTTCACACTCTAGCTGTAACAATGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FCKIPSVSARTD*YFSHSSCNNVC Trigger: GCACACATTGTTACAGCTAGAGTGTGAAAAATACAAATCCGTCCTTGCAGAAACAGAAGGAATTTTACAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 ENST00000553624.5 ENST00000554507.5 ENST00000555172.5 ENST00000555573.5 |
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| CDS TCA 72 bp | CAAATCAATAACCTCTCTCTTATCTACCACAGGACTTaGGTCAGCATTATCCATCAAAGGAATATAAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QINNLSLIYHRT*VSIIHQRNISS Trigger: ACTACTTATATTCCTTTGATGGATAATGCTGACTCAAGTCCTGTGGTAGATAAGAGAGAGGTTATTGATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 |
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| CDS GCA 72 bp | GATTTGTATTTTTCACACTCTAGCTGTAACAATGTGTaGATTTCATCAGCTTCTTTCAACTTGTGCTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: DLYFSHSSCNNV*ISSASFNLCSR Trigger: TCTAGAGCACAAGTTGAAAGAAGCTGATGAAATGCACACATTGTTACAGCTAGAGTGTGAAAAATACAAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000334975.13 ENST00000395308.5 ENST00000395309.7 ENST00000395311.5 ENST00000395314.8 ENST00000413890.6 ENST00000438792.6 ENST00000459737.5 ENST00000553624.5 ENST00000554507.5 ENST00000555172.5 ENST00000555573.5 ENST00000556631.1 |
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| CDS CAA 72 bp | ACCACAAAGCATAGAAGCTATCAAAGTTTAGCAGCATaGTGTCAAAACGACTTGGTAACAAACCTAAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: TTKHRSYQSLAA*CQNDLVTNLNK Trigger: CTTATTTAGGTTTGTTACCAAGTCGTTTTGACACAATGCTGCTAAACTTTGATAGCTTCTATGCTTTGTGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334975.13 |
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| CDS GCA 72 bp | GTATTAACTGATATTCAGCTGTATTTATTCTGCAAGTaGATTAGAGTACCATCAGCAACTGTAAATTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLTDIQLYLFCK*IRVPSATVNSA Trigger: TGCAGAATTTACAGTTGCTGATGGTACTCTAATGCACTTGCAGAATAAATACAGCTGAATATCAGTTAATAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556631.1 |
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