RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KSR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171435

Ensembl transcript IDs: ENST00000339824.7, ENST00000425217.5, ENST00000543793.1, ENST00000545002.1

Found 2022 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGCCGCCGAGCAGTTGTCCAGTGCTCCCAGGTCGGTCGGGGTTaGTACCCTCTGATGCTGAGTCTCTGGCCTCCTGAGCTGGCAGAG +
Preference number: 1 (lower is better)
Translates to: GGRRAVVQCSQVGRG*YPLMLSLWPPELAE
Trigger: CTCTGCCAGCTCAGGAGGCCAGAGACTCAGCATCAGAGGGTACCAACCCCGACCGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp GGGCTCAAGTCTGAGGTGCAGGGAGGCCGCCGAGCAGTTGTCCAGTaGTCCCAGGTCGGTCGGGGTTGGTACCCTCTGATGCTGAGTCTC +
Preference number: 1 (lower is better)
Translates to: GLKSEVQGGRRAVVQ*SQVGRGWYPLMLSL
Trigger: GAGACTCAGCATCAGAGGGTACCAACCCCGACCGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTCCCTGCACCTCAGACTTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp AAGGCACCACGTGCAGCCTGCAGTGCTCTCATTAGTGCTGTCCCCTaGGCCGCACTGATCAATAACGCATCACCCTGGCTGGTCCGGTTC +
Preference number: 1 (lower is better)
Translates to: KAPRAACSALISAVP*AALINNASPWLVRF
Trigger: GAACCGGACCAGCCAGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGACAGCACTAATGAGAGCACTGCAGGCTGCACGTGGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GTGCAGCCTGCAGTGCTCTCATTAGTGCTGTCCCCTGGGCCGCACTaGTCAATAACGCATCACCCTGGCTGGTCCGGTTCAGTCCTAGCT +
Preference number: 1 (lower is better)
Translates to: VQPAVLSLVLSPGPH*SITHHPGWSGSVLA
Trigger: AGCTAGGACTGAACCGGACCAGCCAGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGACAGCACTAATGAGAGCACTGCAGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GGAAGGAAGGGCCCTTTCCCACCCCTGAGAGGGAAGAGCACTCACTaGTGTACGCCTCTCAGGAACACGGGACCACAGTGCAACATCCAG +
Preference number: 1 (lower is better)
Translates to: GRKGPFPPLRGKSTH*CTPLRNTGPQCNIQ
Trigger: CTGGATGTTGCACTGTGGTCCCGTGTTCCTGAGAGGCGTACATCAGTGAGTGCTCTTCCCTCTCAGGGGTGGGAAAGGGCCCTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp CGGCATCCTTCCTACAGATACAGAACACCAGGGGCTTCCCCAACATaGTCAGGAAGAGTCGCCGGCCCAGGTTGGGATCAAGAGGAGGGA +
Preference number: 1 (lower is better)
Translates to: RHPSYRYRTPGASPT*SGRVAGPGWDQEEG
Trigger: TCCCTCCTCTTGATCCCAACCTGGGCCGGCGACTCTTCCTGACCATGTTGGGGAAGCCCCTGGTGTTCTGTATCTGTAGGAAGGATGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CTGGAGCCTGTGGACCCAAGAAGTCCTGGTGTGATGGAAGAGAAGTaGGTGGTTGGGTTTCAGGCACTCAGTAGGCTGCTGGGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: LEPVDPRSPGVMEEK*VVGFQALSRLLGRA
Trigger: GGCTCTGCCCAGCAGCCTACTGAGTGCCTGAAACCCAACCACTCACTTCTCTTCCATCACACCAGGACTTCTTGGGTCCACAGGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CTGCATGATCCCAATGAGTGGGAAGGAAGGGCCCTTTCCCACCCCTaGGAGGGAAGAGCACTCACTGATGTACGCCTCTCAGGAACACGG +
Preference number: 1 (lower is better)
Translates to: LHDPNEWEGRALSHP*EGRALTDVRLSGTR
Trigger: CCGTGTTCCTGAGAGGCGTACATCAGTGAGTGCTCTTCCCTCTCAGGGGTGGGAAAGGGCCCTTCCTTCCCACTCATTGGGATCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp AGAGAGAGAGAGAGAGAGAGAGAGGTCTGTAGAGCCAGAGAGGGATaGAGAGCAGGCCTGAGGTGGCCTGAGTACTGGTCTGACTCCAGC +
Preference number: 1 (lower is better)
Translates to: REREREREVCRAREG*RAGLRWPEYWSDSS
Trigger: GCTGGAGTCAGACCAGTACTCAGGCCACCTCAGGCCTGCTCTGCATCCCTCTCTGGCTCTACAGACCTCTCTCTCTCTCTCTCTCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GGAAACACAGGGGTTTCCTGTAGCCAGGCTCCTGGGAAGCATGACTaGTCTCACCATTCTTCCCGGTTTGGAAGCAGGTTTGGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: GNTGVSCSQAPGKHD*SHHSSRFGSRFGPQ
Trigger: CTGGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGGTGAGATCAGTCATGCTTCCCAGGAGCCTGGCTACAGGAAACCCCTGTGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp CGTCGTCAAGCCAAGAGCCATAGATGTCCCCAGAAGAGCAGTGTCTaGTTAGGAGCAGCCCAAGCCGGGGTCTTTAGTCCTCTAGTCCCA +
Preference number: 1 (lower is better)
Translates to: RRQAKSHRCPQKSSV*LGAAQAGVFSPLVP
Trigger: TGGGACTAGAGGACTAAAGACCCCGGCTTGGGCTGCTCCTAAGCAGACACTGCTCTTCTGGGGACATCTATGGCTCTTGGCTTGACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp CCCAGTAAGCTGGGAGTGTTGGAAAGGCAATTCAGGAGGGCCCTTTaGGAAACACAGGGGTTTCCTGTAGCCAGGCTCCTGGGAAGCATG +
Preference number: 1 (lower is better)
Translates to: PSKLGVLERQFRRAL*ETQGFPVARLLGSM
Trigger: CATGCTTCCCAGGAGCCTGGCTACAGGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAATTGCCTTTCCAACACTCCCAGCTTACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp TTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTaGGGAAAGAAGTCAAGGTCTCCACATCTGAGCCAGGGCACCCTC +
Preference number: 1 (lower is better)
Translates to: FPHRTPRLTVGTRAC*GKKSRSPHLSQGTL
Trigger: GAGGGTGCCCTGGCTCAGATGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp AGGAGCCAGGCAAAGATTTATGCATCACACAGTTGGGCAGAAGCCTaGCCAAGGACAGCCCCTCCCTTAATGCTCCAGTCGAGCCAGGAC +
Preference number: 1 (lower is better)
Translates to: RSQAKIYASHSWAEA*PRTAPPLMLQSSQD
Trigger: GTCCTGGCTCGACTGGAGCATTAAGGGAGGGGCTGTCCTTGGTCAGGCTTCTGCCCAACTGTGTGATGCATAAATCTTTGCCTGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TCTAGGGGTAAAACAGCTGGACCTACAGAGGCCATCCTCACCCACTaGCTGTCTCCATGCCCAAATCAGTCACACGGGACTGGACAGAAC +
Preference number: 1 (lower is better)
Translates to: SRGKTAGPTEAILTH*LSPCPNQSHGTGQN
Trigger: GTTCTGTCCAGTCCCGTGTGACTGATTTGGGCATGGAGACAGGCAGTGGGTGAGGATGGCCTCTGTAGGTCCAGCTGTTTTACCCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp CAGTGCCCGACTCGTCCTCTCTGTTACCCTTCCCAATCCTGGGACTaGCGGAAGCTCCAGGGATTTGATTCTAGGGGTAAAACAGCTGGA +
Preference number: 1 (lower is better)
Translates to: QCPTRPLCYPSQSWD*RKLQGFDSRGKTAG
Trigger: TCCAGCTGTTTTACCCCTAGAATCAAATCCCTGGAGCTTCCGGCAGTCCCAGGATTGGGAAGGGTAACAGAGAGGACGAGTCGGGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp TGGAGGGACCCAGGAGGGACTCTGCCAACCCAGATGTACATTTCCTaGAAATCCGGGCTGCTGCTGGCAGCCTGTCAGTTTGAGAACATA +
Preference number: 1 (lower is better)
Translates to: WRDPGGTLPTQMYIS*KSGLLLAACQFENI
Trigger: TATGTTCTCAAACTGACAGGCTGCCAGCAGCAGCCCGGATTTCCAGGAAATGTACATCTGGGTTGGCAGAGTCCCTCCTGGGTCCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp ATGGTGGCACAGTGGAACAAGACCAGCCTGCAGGGGATGGATGGGTaGAGTGAAGGTAGGCACAGGATGAGGATAGGGAGGGCATATTTC +
Preference number: 1 (lower is better)
Translates to: MVAQWNKTSLQGMDG*SEGRHRMRIGRAYF
Trigger: GAAATATGCCCTCCCTATCCTCATCCTGTGCCTACCTTCACTTCACCCATCCATCCCCTGCAGGCTGGTCTTGTTCCACTGTGCCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp CAGAGGTTCACTGCGGCTCCACATTCCAGGACCCAGACTGACATTTaGTGCCTGTCACTCCCCTTGGAGTTCAAAGTGATTCCCTTGCAG +
Preference number: 1 (lower is better)
Translates to: QRFTAAPHSRTQTDI*CLSLPLEFKVIPLQ
Trigger: CTGCAAGGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAGTGAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp AGCCTGGCACGTAGTAAGTGCTCTGTGAATGAGGGCTGTTCAGGGTaGATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCA +
Preference number: 1 (lower is better)
Translates to: SLARSKCSVNEGCSG*IVTLPPRHPGPPDS
Trigger: TGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCACTTACTACGTGCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GCTTCCCAGATGGTACAGCTGGAACCTACCACATACAGACAGAACTaGGGAGTGCCCCGTCATTGGGACAGTCTGGCTCTTGCTTGTCAA +
Preference number: 1 (lower is better)
Translates to: ASQMVQLEPTTYRQN*GVPRHWDSLALACQ
Trigger: TTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGTGGTAGGTTCCAGCTGTACCATCTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TTTCCTTTCTCCCATGGAAGGTTGCAGATGGCAGGATGCTGGATTTaGATCCTAGTCGCGTGGCCTGGAGACAACTCAGGGGACATCTGG +
Preference number: 1 (lower is better)
Translates to: FPFSHGRLQMAGCWI*ILVAWPGDNSGDIW
Trigger: CCAGATGTCCCCTGAGTTGTCTCCAGGCCACGCGACTAGGATTCAAATCCAGCATCCTGCCATCTGCAACCTTCCATGGGAGAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp GCCCTGGGCTTCCTGTTCACTGCCCAGATAATCCTGCTATTGCTCTaGTTGGGGACAGATTTCCCTTTTGTATCAGGTCACATGCAGGGG +
Preference number: 1 (lower is better)
Translates to: ALGFLFTAQIILLLL*LGTDFPFVSGHMQG
Trigger: CCCCTGCATGTGACCTGATACAAAAGGGAAATCTGTCCCCAAGCAGAGCAATAGCAGGATTATCTGGGCAGTGAACAGGAAGCCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp CTGGCTGCAGCAGAGACCAATGCAGGTGGGGACAGAGTAGTGAAGTaGGGAAAGATCGAGAAGTCAAGAGCAAGTGACTCAGATTCAGGG +
Preference number: 1 (lower is better)
Translates to: LAAAETNAGGDRVVK*GKIEKSRASDSDSG
Trigger: CCCTGAATCTGAGTCACTTGCTCTTGACTTCTCGATCTTTCCCCACTTCACTACTCTGTCCCCACCTGCATTGGTCTCTGCTGCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp CCTCACCCACTGCCTGTCTCCATGCCCAAATCAGTCACACGGGACTaGACAGAACTGCCACATCTTGTCCAGACTGTCTATGTTGTTGCT +
Preference number: 1 (lower is better)
Translates to: PHPLPVSMPKSVTRD*TELPHLVQTVYVVA
Trigger: AGCAACAACATAGACAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCCGTGTGACTGATTTGGGCATGGAGACAGGCAGTGGGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GAATCTTCACCCTGTGGACTGGTCCCCTCGGGAAGCCCATGTATATaGCGGTTTGCTAAAAGCAAGACTGACTGGAACAACTCGCTGCTG +
Preference number: 1 (lower is better)
Translates to: ESSPCGLVPSGSPCI*RFAKSKTDWNNSLL
Trigger: CAGCAGCGAGTTGTTCCAGTCAGTCTTGCTTTTAGCAAACCGTCATATACATGGGCTTCCCGAGGGGACCAGTCCACAGGGTGAAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp AGATGGTACAGCTGGAACCTACCACATACAGACAGAACTGAGGAGTaGCCCGTCATTGGGACAGTCTGGCTCTTGCTTGTCAAGGGGAAA +
Preference number: 1 (lower is better)
Translates to: RWYSWNLPHTDRTEE*PVIGTVWLLLVKGK
Trigger: TTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGTGGTAGGTTCCAGCTGTACCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp CAACTCGCTGCTGAGTCAGTGACTTATGTGTACAGGGCACCTGTGTaGAGCTGTGATGGGACAAGGGCAAACACACAAATCTTGGTCGTG +
Preference number: 1 (lower is better)
Translates to: QLAAESVTYVYRAPV*SCDGTRANTQILVV
Trigger: CACGACCAAGATTTGTGTGTTTGCCCTTGTCCCATCACAGCTGCACACAGGTGCCCTGTACACATAAGTCACTGACTCAGCAGCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CAGATTTCCCTTTTGTATCAGGTCACATGCAGGGGGTCAGGGCTTTaGAAACATGGGCAAATGACCCAGAGGTTCTCCTCTCCCATCTGC +
Preference number: 1 (lower is better)
Translates to: QISLLYQVTCRGSGL*KHGQMTQRFSSPIC
Trigger: GCAGATGGGAGAGGAGAACCTCTGGGTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCTGCATGTGACCTGATACAAAAGGGAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GGACAGAGTAGTGAAGTGGGGAAAGATCGAGAAGTCAAGAGCAAGTaGCTCAGATTCAGGGATGGACCCAAGGCACCCTGTTCCACAAAG +
Preference number: 1 (lower is better)
Translates to: GQSSEVGKDREVKSK*LRFRDGPKAPCSTK
Trigger: CTTTGTGGAACAGGGTGCCTTGGGTCCATCCCTGAATCTGAGTCACTTGCTCTTGACTTCTCGATCTTTCCCCACTTCACTACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp ACGAAGAGTTTTAAAGTCCAGGGAGTTGGTCCAGCCTTCAGGGCCTaGATTGCCTCCATATCACACAGGCCAAGCAGTCAACATCTGCTC +
Preference number: 1 (lower is better)
Translates to: TKSFKVQGVGPAFRA*IASISHRPSSQHLL
Trigger: GAGCAGATGTTGACTGCTTGGCCTGTGTGATATGGAGGCAATTCAGGCCCTGAAGGCTGGACCAACTCCCTGGACTTTAAAACTCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GTACATTTCCTGGAAATCCGGGCTGCTGCTGGCAGCCTGTCAGTTTaGGAACATAAGTTCAAGCTTCCGTGCAAACTCCCAGTATGGTCC +
Preference number: 1 (lower is better)
Translates to: VHFLEIRAAAGSLSV*EHKFKLPCKLPVWS
Trigger: GGACCATACTGGGAGTTTGCACGGAAGCTTGAACTTATGTTCTCAAACTGACAGGCTGCCAGCAGCAGCCCGGATTTCCAGGAAATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp AAGAAGAGGCAGTGGACAAGAAGGTACTCTCAGCCACCGAGCTGGTaGTTAGAGGTATTTCAAGAGCTCAGGAGTAGAGCTGGTGGTCCA +
Preference number: 1 (lower is better)
Translates to: KKRQWTRRYSQPPSW*LEVFQELRSRAGGP
Trigger: TGGACCACCAGCTCTACTCCTGAGCTCTTGAAATACCTCTAATCACCAGCTCGGTGGCTGAGAGTACCTTCTTGTCCACTGCCTCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp ATGGAGAGAATGACTGGAGATTTCAGCCCCTGTCCGTGCAGACGGTaGAAGGCAAGTCCACATTCTCCTTACCTAGACAGCCTTCAAACC +
Preference number: 1 (lower is better)
Translates to: MERMTGDFSPCPCRR*KASPHSPYLDSLQT
Trigger: GGTTTGAAGGCTGTCTAGGTAAGGAGAATGTGGACTTGCCTTTCACCGTCTGCACGGACAGGGGCTGAAATCTCCAGTCATTCTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TCTTCTCTGCCTGGTCCAGGTATGGTCAAGGGCACAGATGTAATGTaGCTTGCCTTATCTGCCCCAGTCAACTTCTGCTTTGGGATAGGG +
Preference number: 1 (lower is better)
Translates to: SSLPGPGMVKGTDVM*LALSAPVNFCFGIG
Trigger: CCCTATCCCAAAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCACATTACATCTGTGCCCTTGACCATACCTGGACCAGGCAGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp AAGTCTCAAAGAGAGCGAGAAATGAGAGGCTTGGGGTGGAAACGTTaGCCACCTAAGTCTGGGATCTTCTCTGCCTGGTCCAGGTATGGT +
Preference number: 1 (lower is better)
Translates to: KSQREREMRGLGWKR*PPKSGIFSAWSRYG
Trigger: ACCATACCTGGACCAGGCAGAGAAGATCCCAGACTTAGGTGGTCAACGTTTCCACCCCAAGCCTCTCATTTCTCGCTCTCTTTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp CAGACAGAACTGAGGAGTGCCCCGTCATTGGGACAGTCTGGCTCTTaGTTGTCAAGGGGAAACAAGAGTGAACAACGTCAAACACACAGA +
Preference number: 1 (lower is better)
Translates to: QTELRSAPSLGQSGS*LSRGNKSEQRQTHR
Trigger: TCTGTGTGTTTGACGTTGTTCACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TTCAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTaGCCTTTATATGCAGCACCCCCTGACTTCCCAGAAGCCCAGACT +
Preference number: 1 (lower is better)
Translates to: FREETKEQLESGSFS*PLYAAPPDFPEAQT
Trigger: AGTCTGGGCTTCTGGGAAGTCAGGGGGTGCTGCATATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TGTCCCAATTCCCAAAGCAATTTTCCAAGATCTGGTCTTTTGCAGTaGCCGACTCGTCCTCTCTGTTACCCTTCCCAATCCTGGGACTGC +
Preference number: 1 (lower is better)
Translates to: CPNSQSNFPRSGLLQ*PTRPLCYPSQSWDC
Trigger: GCAGTCCCAGGATTGGGAAGGGTAACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTGCTTTGGGAATTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp GAAGGTGTCCCAATTCCCAAAGCAATTTTCCAAGATCTGGTCTTTTaGAGTGCCCGACTCGTCCTCTCTGTTACCCTTCCCAATCCTGGG +
Preference number: 1 (lower is better)
Translates to: EGVPIPKAIFQDLVF*SARLVLSVTLPNPG
Trigger: CCCAGGATTGGGAAGGGTAACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTGCTTTGGGAATTGGGACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TCTGCCTGGTCCAGGTATGGTCAAGGGCACAGATGTAATGTGACTTaGCTTATCTGCCCCAGTCAACTTCTGCTTTGGGATAGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: SAWSRYGQGHRCNVT*LICPSQLLLWDREE
Trigger: TTCCTCCCTATCCCAAAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCACATTACATCTGTGCCCTTGACCATACCTGGACCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp ACTTACTATGTGCCAGGCACTACTAAGACAAGTCCAGGAGGTCACTaGGACCGCAGATTTTCCATCAACCTCCTGCCCCACTACTGGTTT +
Preference number: 1 (lower is better)
Translates to: TYYVPGTTKTSPGGH*DRRFSINLLPHYWF
Trigger: AAACCAGTAGTGGGGCAGGAGGTTGATGGAAAATCTGCGGTCCCAGTGACCTCCTGGACTTGTCTTAGTAGTGCCTGGCACATAGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GTCATTGGGACAGTCTGGCTCTTGCTTGTCAAGGGGAAACAAGAGTaGACAACGTCAAACACACAGACACACACACACATAGCCCCGTCT +
Preference number: 1 (lower is better)
Translates to: VIGTVWLLLVKGKQE*TTSNTQTHTHIAPS
Trigger: AGACGGGGCTATGTGTGTGTGTGTCTGTGTGTTTGACGTTGTTCACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTaGGGTGAAAAGGGATGCTACTCTCAGAGAACAGGAGAAAACAGC +
Preference number: 1 (lower is better)
Translates to: SEVILAFQMARRCGQ*GEKGCYSQRTGENS
Trigger: GCTGTTTTCTCCTGTTCTCTGAGAGTAGCATCCCTTTTCACCTCACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GACGTGTTGATTGGGGCAAGCTTGGTAAGCATGACAGCAACAGCCTaGCCTTGTAGACCAGGAATTCTGGGGAATCTATCTTCAAGGGCA +
Preference number: 1 (lower is better)
Translates to: DVLIGASLVSMTATA*PCRPGILGNLSSRA
Trigger: TGCCCTTGAAGATAGATTCCCCAGAATTCCTGGTCTACAAGGTCAGGCTGTTGCTGTCATGCTTACCAAGCTTGCCCCAATCAACACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TCCCATACAGCCACAGAACTGAGATCCAGAGCTGTTGGAATTCAGTaGTGGGACGTGTTGATTGGGGCAAGCTTGGTAAGCATGACAGCA +
Preference number: 1 (lower is better)
Translates to: SHTATELRSRAVGIQ*WDVLIGASLVSMTA
Trigger: TGCTGTCATGCTTACCAAGCTTGCCCCAATCAACACGTCCCATCACTGAATTCCAACAGCTCTGGATCTCAGTTCTGTGGCTGTATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CAAACCATCATAGGAATTCCAGCCTGGCACGTAGTAAGTGCTCTGTaGATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGAC +
Preference number: 1 (lower is better)
Translates to: QTIIGIPAWHVVSAL*MRAVQGGLLLCLLD
Trigger: GTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCACTTACTACGTGCCAGGCTGGAATTCCTATGATGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAACCCCATaGGATGAATCCTTCATATTCTTGGTGTTAGGAAATGGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: PAQSSVEGGQPFSTP*DESFIFLVLGNGSC
Trigger: GCAGCTCCCATTTCCTAACACCAAGAATATGAAGGATTCATCTCATGGGGTTGAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TCCAAGCCATGGTATGTTGGAGAAGCCACCAACACACAGCAGATTTaGCCCCTCCATTGGAAGACACCATCAGCCAGATGTGGTGTTCTT +
Preference number: 1 (lower is better)
Translates to: SKPWYVGEATNTQQI*PLHWKTPSARCGVL
Trigger: AAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTTGGTGGCTTCTCCAACATACCATGGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CCATTCTACTCAAATTTCAAGACAGGGTTCAGAAGTCTCCTCCTCTaGGAATCCTTCCTGGAGGGTCTTTCTCTGGGTTGGGAGCTCCTG +
Preference number: 1 (lower is better)
Translates to: PFYSNFKTGFRSLLL*ESFLEGLSLGWELL
Trigger: CAGGAGCTCCCAACCCAGAGAAAGACCCTCCAGGAAGGATTCTCAGAGGAGGAGACTTCTGAACCCTGTCTTGAAATTTGAGTAGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CGAGTGGATCCTGGTACAAGATCAAGTCTCAAAGAGAGCGAGAAATaGGAGGCTTGGGGTGGAAACGTTGACCACCTAAGTCTGGGATCT +
Preference number: 1 (lower is better)
Translates to: RVDPGTRSSLKESEK*EAWGGNVDHLSLGS
Trigger: AGATCCCAGACTTAGGTGGTCAACGTTTCCACCCCAAGCCTCTCATTTCTCGCTCTCTTTGAGACTTGATCTTGTACCAGGATCCACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp AACTCAAAAGACGTTCTAACTTTCCTACTGTACTTCAGAGCTCTATaGAAAGGTGCCACACGCCATGACAGGCTCGGGTTGGGGTGTCTG +
Preference number: 1 (lower is better)
Translates to: NSKDVLTFLLYFRAL*KGATRHDRLGLGCL
Trigger: CAGACACCCCAACCCGAGCCTGTCATGGCGTGTGGCACCTTTGCATAGAGCTCTGAAGTACAGTAGGAAAGTTAGAACGTCTTTTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp ATCTCCCCAAACCATCATAGGAATTCCAGCCTGGCACGTAGTAAGTaGTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCT +
Preference number: 1 (lower is better)
Translates to: ISPNHHRNSSLARSK*SVNEGCSGWIVTLP
Trigger: AGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCACTTACTACGTGCCAGGCTGGAATTCCTATGATGGTTTGGGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp CTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTTaGCCCATTGGAACGAGAATAAGACTACTGATCTCCCCAAACCAT +
Preference number: 1 (lower is better)
Translates to: LGLQFGGWFLSLYHS*PIGTRIRLLISPNH
Trigger: ATGGTTTGGGGAGATCAGTAGTCTTATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp GGTGGGTTCCTGGGAATGGATGAGCCCAAAGACTCGTTTTTAAAATaGTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACA +
Preference number: 1 (lower is better)
Translates to: GGFLGMDEPKDSFLK*WVCNLEAGFCPCTT
Trigger: TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCCCAGGAACCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp GGTATCTTGTGGGGAGAGTTGAGGAAGCTGCTTAACATCCTCCAATaGCCAGGACAGTCGCCACCTCAAAGAATTATCTGGCCCCAAATA +
Preference number: 1 (lower is better)
Translates to: GILWGELRKLLNILQ*PGQSPPQRIIWPQI
Trigger: TATTTGGGGCCAGATAATTCTTTGAGGTGGCGACTGTCCTGGGCATTGGAGGATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp ACAGAAGGGCTTTCCCTGAGTAGCCTCAGAAAGCAACACCAAGATTaGCGGATGCAAGTCTCAAGATTTCAGCTCAGCAAGAGGATCTGC +
Preference number: 1 (lower is better)
Translates to: TEGLSLSSLRKQHQD*RMQVSRFQLSKRIC
Trigger: GCAGATCCTCTTGCTGAGCTGAAATCTTGAGACTTGCATCCGGCAATCTTGGTGTTGCTTTCTGAGGCTACTCAGGGAAAGCCCTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TGCCTGTCTCCATGCCCAAATCAGTCACACGGGACTGGACAGAACTaGCACATCTTGTCCAGACTGTCTATGTTGTTGCTTCATTGCTAC +
Preference number: 1 (lower is better)
Translates to: CLSPCPNQSHGTGQN*HILSRLSMLLLHCY
Trigger: GTAGCAATGAAGCAACAACATAGACAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCCGTGTGACTGATTTGGGCATGGAGACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp GGATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATaGGTCGCTTCATACGTCACAGATATTAAACCTGGCAAACTGGCT +
Preference number: 1 (lower is better)
Translates to: GLLLCLLDILGHLTQ*VASYVTDIKPGKLA
Trigger: AGCCAGTTTGCCAGGTTTAATATCTGTGACGTATGAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp CCTCCATTGGAAGACACCATCAGCCAGATGTGGTGTTCTTGTTCATaGAACCACTGTCCACATGGATGGAATCGGGCTCTAAGCTACCTT +
Preference number: 1 (lower is better)
Translates to: PPLEDTISQMWCSCS*NHCPHGWNRALSYL
Trigger: AAGGTAGCTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp ACAGCAGATTTGACCCCTCCATTGGAAGACACCATCAGCCAGATGTaGTGTTCTTGTTCATGGAACCACTGTCCACATGGATGGAATCGG +
Preference number: 1 (lower is better)
Translates to: TADLTPPLEDTISQM*CSCSWNHCPHGWNR
Trigger: CCGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp GGATGTTTTTGGATGTCACCAGTACCAGGTGCTACTGGTATCTTGTaGGGAGAGTTGAGGAAGCTGCTTAACATCCTCCAATGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: GCFWMSPVPGATGIL*GELRKLLNILQCPG
Trigger: TCCTGGGCATTGGAGGATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGATACCAGTAGCACCTGGTACTGGTGACATCCAAAAACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TTTCCTACTGTACTTCAGAGCTCTATGCAAAGGTGCCACACGCCATaGCAGGCTCGGGTTGGGGTGTCTGAAAACAGATATTTCCAAAGG +
Preference number: 1 (lower is better)
Translates to: FPTVLQSSMQRCHTP*QARVGVSENRYFQR
Trigger: CCTTTGGAAATATCTGTTTTCAGACACCCCAACCCGAGCCTGTCATGGCGTGTGGCACCTTTGCATAGAGCTCTGAAGTACAGTAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TTTGCTAAAAGCAAGACTGACTGGAACAACTCGCTGCTGAGTCAGTaGCTTATGTGTACAGGGCACCTGTGTGCAGCTGTGATGGGACAA +
Preference number: 1 (lower is better)
Translates to: FAKSKTDWNNSLLSQ*LMCTGHLCAAVMGQ
Trigger: TTGTCCCATCACAGCTGCACACAGGTGCCCTGTACACATAAGTCACTGACTCAGCAGCGAGTTGTTCCAGTCAGTCTTGCTTTTAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CAGTGGACCCTCCATCCATCTGGCCTTTCTTTCCTGGATGGCATCTaGATAGAGTGTTCCTTCTCAGCAACAAGACATTGGCAACAAGTG +
Preference number: 1 (lower is better)
Translates to: QWTLHPSGLSFLDGI*IECSFSATRHWQQV
Trigger: CACTTGTTGCCAATGTCTTGTTGCTGAGAAGGAACACTCTATTCAGATGCCATCCAGGAAAGAAAGGCCAGATGGATGGAGGGTCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp CAAGTCCAGGAGGTCACTGGGACCGCAGATTTTCCATCAACCTCCTaGCCCACTACTGGTTTCAAAACTAAACTGGTAACAGAATGGGTA +
Preference number: 1 (lower is better)
Translates to: QVQEVTGTADFPSTS*PTTGFKTKLVTEWV
Trigger: TACCCATTCTGTTACCAGTTTAGTTTTGAAACCAGTAGTGGGGCAGGAGGTTGATGGAAAATCTGCGGTCCCAGTGACCTCCTGGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp GATTGCCGGATGCAAGTCTCAAGATTTCAGCTCAGCAAGAGGATCTaGTTCTTAGAAGGGCTGTGGAAGGATGGAGAGAATGACTGGAGA +
Preference number: 1 (lower is better)
Translates to: DCRMQVSRFQLSKRI*FLEGLWKDGENDWR
Trigger: TCTCCAGTCATTCTCTCCATCCTTCCACAGCCCTTCTAAGAAGCAGATCCTCTTGCTGAGCTGAAATCTTGAGACTTGCATCCGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp AACCTAACAAACAAACTCATTGGGGTTGATATGGCACCCACAACATaGTCTGGCAAAGGGGAATCCCAATACCATCCAGCCCTGCCAATG +
Preference number: 1 (lower is better)
Translates to: NLTNKLIGVDMAPTT*SGKGESQYHPALPM
Trigger: CATTGGCAGGGCTGGATGGTATTGGGATTCCCCTTTGCCAGACCATGTTGTGGGTGCCATATCAACCCCAATGAGTTTGTTTGTTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp GGGTTCCTGGGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTaGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTT +
Preference number: 1 (lower is better)
Translates to: GFLGMDEPKDSFLKC*VCNLEAGFCPCTTV
Trigger: AACTGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCCCAGGAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp AGCCAGATGTGGTGTTCTTGTTCATGGAACCACTGTCCACATGGATaGAATCGGGCTCTAAGCTACCTTTCTCATCTCCTAGCAGTGTCT +
Preference number: 1 (lower is better)
Translates to: SQMWCSCSWNHCPHG*NRALSYLSHLLAVS
Trigger: AGACACTGCTAGGAGATGAGAAAGGTAGCTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp CATCAGCCAGATGTGGTGTTCTTGTTCATGGAACCACTGTCCACATaGATGGAATCGGGCTCTAAGCTACCTTTCTCATCTCCTAGCAGT +
Preference number: 1 (lower is better)
Translates to: HQPDVVFLFMEPLST*MESGSKLPFSSPSS
Trigger: ACTGCTAGGAGATGAGAAAGGTAGCTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp ATACATTCTTTCCCACACTTCAGGCTGTATTGCAGGCTTGGCCTGTaGCCCACTATGGCCCCTAGGTCTTCTTCAGTCATTTCTGTAACA +
Preference number: 1 (lower is better)
Translates to: IHSFPHFRLYCRLGL*PTMAPRSSSVISVT
Trigger: TGTTACAGAAATGACTGAAGAAGACCTAGGGGCCATAGTGGGCCACAGGCCAAGCCTGCAATACAGCCTGAAGTGTGGGAAAGAATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GCTTCTTGTCTCTCTTCCCCATTGGGCTTTAGGCTTCAGAACAGGTaGGACATTGTATCACTCATCACTGAATGCCCAGGGTCTAACACA +
Preference number: 1 (lower is better)
Translates to: ASCLSSPLGFRLQNR*DIVSLITECPGSNT
Trigger: TGTGTTAGACCCTGGGCATTCAGTGATGAGTGATACAATGTCTCACCTGTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TGTCAGAGAGGACAGAGGTTCACTGAATTCCAGACAAACCCAGAATaGCAGCATCTGTGTGAGGACACAAAGACCTCTCTTCTACCTTGT +
Preference number: 1 (lower is better)
Translates to: CQRGQRFTEFQTNPE*QHLCEDTKTSLLPC
Trigger: ACAAGGTAGAAGAGAGGTCTTTGTGTCCTCACACAGATGCTGGCATTCTGGGTTTGTCTGGAATTCAGTGAACCTCTGTCCTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TCCAGGTATGGTCAAGGGCACAGATGTAATGTGACTTGCCTTATCTaGCCCAGTCAACTTCTGCTTTGGGATAGGGAGGAAGAATGTTCT +
Preference number: 1 (lower is better)
Translates to: SRYGQGHRCNVTCLI*PSQLLLWDREEECS
Trigger: AGAACATTCTTCCTCCCTATCCCAAAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCACATTACATCTGTGCCCTTGACCATACCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp AGGAATTCTGGGGAATCTATCTTCAAGGGCACCTGGGTTCTACAGTaGAGGACCAGTCAAGGCACAAGAGAAAATGTCTTAGAGGGTGTT +
Preference number: 1 (lower is better)
Translates to: RNSGESIFKGTWVLQ*RTSQGTRENVLEGV
Trigger: AACACCCTCTAAGACATTTTCTCTTGTGCCTTGACTGGTCCTCCACTGTAGAACCCAGGTGCCCTTGAAGATAGATTCCCCAGAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp ACCTTTGTCAGCAGCTCTCCCACAGTATACCCTCTCCCATGTTTCTaGTCCCCCGTGAGTTTTCTTTCCATAGATCTACATGAGTTGCAA +
Preference number: 1 (lower is better)
Translates to: TFVSSSPTVYPLPCF*SPVSFLSIDLHELQ
Trigger: TTGCAACTCATGTAGATCTATGGAAAGAAAACTCACGGGGGACCAGAAACATGGGAGAGGGTATACTGTGGGAGAGCTGCTGACAAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GCACGTCCTCCCACAGGGGGCCAAGAAGGAAGCTCCTTGGTTTTATaGATAATCTGTATCCTGGAAGAGTTGGGTGAAATTTATGTGCAA +
Preference number: 1 (lower is better)
Translates to: ARPPTGGQEGSSLVL*IICILEELGEIYVQ
Trigger: TTGCACATAAATTTCACCCAACTCTTCCAGGATACAGATTATTCATAAAACCAAGGAGCTTCCTTCTTGGCCCCCTGTGGGAGGACGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp TCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAACCCCATGAGATaGATCCTTCATATTCTTGGTGTTAGGAAATGGGAGCTGCATGAT +
Preference number: 1 (lower is better)
Translates to: SVLSGRRTAILNPMR*ILHILGVRKWELHD
Trigger: ATCATGCAGCTCCCATTTCCTAACACCAAGAATATGAAGGATTCATCTCATGGGGTTGAGAATGGCTGTCCTCCTTCCACTGAGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CCTCCTTCAGTACCAGGTAAGGTATCAAGTCTCATTCACAGAGGTTaGCCTTGTTGGAGATTCAGAAACAAGCCTGGGAAAGCTTGGGAA +
Preference number: 1 (lower is better)
Translates to: PPSVPGKVSSLIHRG*PCWRFRNKPGKAWE
Trigger: TTCCCAAGCTTTCCCAGGCTTGTTTCTGAATCTCCAACAAGGTCAACCTCTGTGAATGAGACTTGATACCTTACCTGGTACTGAAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GAGTTTATTATAGCTTCCCTCTCTGGGCCTCAGATCCTGCTTCTGTaGAAGGAGAAGAGTGAGATAAGGGAGGGTCACTCATATCCATCT +
Preference number: 1 (lower is better)
Translates to: EFIIASLSGPQILLL*KEKSEIREGHSYPS
Trigger: AGATGGATATGAGTGACCCTCCCTTATCTCACTCTTCTCCTTTCACAGAAGCAGGATCTGAGGCCCAGAGAGGGAAGCTATAATAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GGCATAGCATTCAGGCCTTGTGGTGAAGCCGTCCCAGAAGATAAATaGTTTTTCTCCAAGCAGGCAGATTACCGAGTAGGATCATACACA +
Preference number: 1 (lower is better)
Translates to: GIAFRPCGEAVPEDK*FFSKQADYRVGSYT
Trigger: TGTGTATGATCCTACTCGGTAATCTGCCTGCTTGGAGAAAAATCATTTATCTTCTGGGACGGCTTCACCACAAGGCCTGAATGCTATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp TGCCCCACTACTGGTTTCAAAACTAAACTGGTAACAGAATGGGTATaGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATA +
Preference number: 1 (lower is better)
Translates to: CPTTGFKTKLVTEWV*IAGPREGSLGFGLI
Trigger: TATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCTGTTACCAGTTTAGTTTTGAAACCAGTAGTGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp CTCTTACCCAGCAAACCTCTCTGTCTGCATTCTGTAAACATTTCTTaGGCACTTACTATGTGCCAGGCACTACTAAGACAAGTCCAGGAG +
Preference number: 1 (lower is better)
Translates to: LLPSKPLCLHSVNIS*ALTMCQALLRQVQE
Trigger: CTCCTGGACTTGTCTTAGTAGTGCCTGGCACATAGTAAGTGCTCAAGAAATGTTTACAGAATGCAGACAGAGAGGTTTGCTGGGTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GACATATTTATAGAGACAGCAAACACACCACTCCATCAACAGGACTaGTACATTCTTTCCCACACTTCAGGCTGTATTGCAGGCTTGGCC +
Preference number: 1 (lower is better)
Translates to: DIFIETANTPLHQQD*YILSHTSGCIAGLA
Trigger: GGCCAAGCCTGCAATACAGCCTGAAGTGTGGGAAAGAATGTATCAGTCCTGTTGATGGAGTGGTGTGTTTGCTGTCTCTATAAATATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp ATACAAAAGTCTAGTGGTCAATATCAGTCAAGGGCTTCTATTGACTaGCAATCCAAGGTAGCTGTGGAGACAAGTGGATGGGGTGAGGAT +
Preference number: 1 (lower is better)
Translates to: IQKSSGQYQSRASID*QSKVAVETSGWGED
Trigger: ATCCTCACCCCATCCACTTGTCTCCACAGCTACCTTGGATTGTCAGTCAATAGAAGCCCTTGACTGATATTGACCACTAGACTTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GTCTGGCGGTCAGCAAAGATGCTTTGTTTTCTGTCTTTCAAACCCTaGCATATTTATAGAGACAGCAAACACACCACTCCATCAACAGGA +
Preference number: 1 (lower is better)
Translates to: VWRSAKMLCFLSFKP*HIYRDSKHTTPSTG
Trigger: TCCTGTTGATGGAGTGGTGTGTTTGCTGTCTCTATAAATATGTCAGGGTTTGAAAGACAGAAAACAAAGCATCTTTGCTGACCGCCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp AATCCGGCGAGTTTTCCATGGAATGAAAGGTCTATGGGACATGCTTaGGAAACAAGGTCTTATTTAGATCAGGCACATTCTAGACAGAGT +
Preference number: 1 (lower is better)
Translates to: NPASFPWNERSMGHA*ETRSYLDQAHSRQS
Trigger: ACTCTGTCTAGAATGTGCCTGATCTAAATAAGACCTTGTTTCCCAAGCATGTCCCATAGACCTTTCATTCCATGGAAAACTCGCCGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp TCTGTATCCTGGAAGAGTTGGGTGAAATTTATGTGCAAATCCACATaGCCTTTAAAGAAAGCTGAGATGTTTCTCTCTGCAAAGCCAAGG +
Preference number: 1 (lower is better)
Translates to: SVSWKSWVKFMCKST*PLKKAEMFLSAKPR
Trigger: CCTTGGCTTTGCAGAGAGAAACATCTCAGCTTTCTTTAAAGGGCATGTGGATTTGCACATAAATTTCACCCAACTCTTCCAGGATACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp ATAAATGATTCTGTACAAATATACACAGTGGACCCTCCATCCATCTaGCCTTTCTTTCCTGGATGGCATCTGAATAGAGTGTTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: INDSVQIYTVDPPSI*PFFPGWHLNRVFLL
Trigger: GAGAAGGAACACTCTATTCAGATGCCATCCAGGAAAGAAAGGCCAGATGGATGGAGGGTCCACTGTGTATATTTGTACAGAATCATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 90 bp GTAATCAATCAAATTAATCATGCGTTAAGTCTGTCGAGTGGATCCTaGTACAAGATCAAGTCTCAAAGAGAGCGAGAAATGAGAGGCTTG +
Preference number: 1 (lower is better)
Translates to: VINQINHALSLSSGS*YKIKSQREREMRGL
Trigger: CAAGCCTCTCATTTCTCGCTCTCTTTGAGACTTGATCTTGTACCAGGATCCACTCGACAGACTTAACGCATGATTAATTTGATTGATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 90 bp GGACAAGGGCAAACACACAAATCTTGGTCGTGTCATTGTATAGAATaGGTTGCAGGTGAGGCTGGTAATTATGATGTAAAAATATACAGC +
Preference number: 1 (lower is better)
Translates to: GQGQTHKSWSCHCIE*VAGEAGNYDVKIYS
Trigger: GCTGTATATTTTTACATCATAATTACCAGCCTCACCTGCAACTCATTCTATACAATGACACGACCAAGATTTGTGTGTTTGCCCTTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 90 bp GCAATCAAGAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATaGTTGTCCCAGGACCCTTTCAATAATGCAAATCCGGCGAGTTTT +
Preference number: 1 (lower is better)
Translates to: AIKKLVSFYLSISNA*LSQDPFNNANPASF
Trigger: AAAACTCGCCGGATTTGCATTATTGAAAGGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTCTTGATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAAAAGGGCTCAAGTCTaGGGTGCAGGGAGGCCGCCG +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGKRAQV*GAGRPP
Trigger: CGGCGGCCTCCCTGCACCTCAGACTTGAGCCCTTTT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAGTTGGGCAGAAGCCTaGCCAAGGACAGCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSWAEA*PRTAPP
Trigger: GGGAGGGGCTGTCCTTGGTCAGGCTTCTGCCCAACT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACGAGCAGTTGTCCAGTaGTCCCAGGTCGGTCGGGGT +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGRAVVQ*SQVGRG
Trigger: ACCCCGACCGACCTGGGAGCACTGGACAACTGCTCG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAGGTGCCACACGCCATaGCAGGCTCGGGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPRCHTP*QARVGV
Trigger: CACCCCAACCCGAGCCTGTCATGGCGTGTGGCACCT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCGAGCAGTTGTCCAGTaGTCCCAGGTCGGTCGGGGT +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPRAVVQ*SQVGRG
Trigger: ACCCCGACCGACCTGGGAGCACTGGACAACTGCTCG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAGGCACTCAGTAGGCTaGTGGGCAGAGCCAAGACAG +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGRHSVG*WAEPRQ
Trigger: CTGTCTTGGCTCTGCCCAGCAGCCTACTGAGTGCCT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTGCTGCCCGCTCAATaGAGGGAGGGAGCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVLPAQ*REGAFL
Trigger: AAGAAAGGCTCCCTCCCTCCATTGAGCGGGCAGCAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGGCTGGGTTTTCCCCTaGATCACTCAGGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPGWVFP*ITQALS
Trigger: GGACAGGGCCTGAGTGATCCAGGGGAAAACCCAGCC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGTAGGCCCCAGTGGGTaGTGGTTTGCTGCAGCAGTC +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPVGPSG*WFAAAV
Trigger: GACTGCTGCAGCAAACCACCACCCACTGGGGCCTAC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTCCCCTGGGCCGCACTaGTCAATAACGCATCACCCT +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPSPGPH*SITHHP
Trigger: AGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAGGTGCCACACGCCATaGCAGGCTCGGGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFRCHTP*QARVGV
Trigger: CACCCCAACCCGAGCCTGTCATGGCGTGTGGCACCT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACAGAAGGGCTTTCCCTaGGTAGCCTCAGAAAGCAAC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGQKGFP*VASESN
Trigger: GTTGCTTTCTGAGGCTACTCAGGGAAAGCCCTTCTG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGTGGATTGTTACTCTaGCTCCTAGACATCCTGGGC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGGLLL*LLDILG
Trigger: GCCCAGGATGTCTAGGAGGCAGAGTAACAATCCACC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATCTGGTCTTTTGCAGTaGCCGACTCGTCCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSGLLQ*PTRPLC
Trigger: ACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAATAACGCATCACCCTaGCTGGTCCGGTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGNNASP*LVRFSP
Trigger: AGGACTGAACCGGACCAGCCAGGGTGATGCGTTATT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACCACATAACCCAACATaGACGTACCCCAAGAACCCG +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGPHNPT*TYPKNP
Trigger: CGGGTTCTTGGGGTACGTCCATGTTGGGTTATGTGG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGGCTGGGTTTTCCCCTaGATCACTCAGGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWGWVFP*ITQALS
Trigger: GGACAGGGCCTGAGTGATCCAGGGGAAAACCCAGCC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTTCACCCTGTGGACTaGTCCCCTCGGGAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLHPVD*SPREAH
Trigger: ATGGGCTTCCCGAGGGGACCAGTCCACAGGGTGAAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAATCTTCAAGGGCACCTaGGTTCTACAGTGGAGGACC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGIFKGT*VLQWRT
Trigger: GGTCCTCCACTGTAGAACCCAGGTGCCCTTGAAGAT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGAGGGCTGTTCAGGGTaGATTGTTACTCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGEGCSG*IVTLPP
Trigger: AGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAGGCCCTTCACTATCTaGGAGACTTTCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGRPFTI*ETFLPG
Trigger: CCCAGGAAGGAAAGTCTCCCAGATAGTGAAGGGCCT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTCCCCTGGGCCGCACTaGTCAATAACGCATCACCCT +
Preference number: 2 (lower is better)
Translates to: SACPACSRHPSYRYRTPGSPGPH*SITHHP
Trigger: AGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGCCAAGGCTTCCTGGTaGATCTTCACCCTGTGGACT +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPAKASW*IFTLWT
Trigger: AGTCCACAGGGTGAAGATTCACCAGGAAGCCTTGGC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGAAGGATGGAGAGAATaGCTGGAGATTTCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGEGWRE*LEISAP
Trigger: AGGGGCTGAAATCTCCAGTCATTCTCTCCATCCTTC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACAAGCAGTCAACATCTaGTCCACCCTATCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGQAVNI*STLSKD
Trigger: GTCCTTGGATAGGGTGGAGCAGATGTTGACTGCTTG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACCTAAGCATTTCCAATaGATGCTTGTCCCAGGACCC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGPKHFQ*MLVPGP
Trigger: GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGGGGCTTCCCCAACATaGTCAGGAAGAGTCGCCGGC +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFGASPT*SGRVAG
Trigger: GCCGGCGACTCTTCCTGACCATGTTGGGGAAGCCCC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCCAGCAACCCCAGAGTaGCTGGGGCTCAGGCAAACA +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILPATPE*LGLRQT
Trigger: TGTTTGCCTGAGCCCCAGCCACTCTGGGGTTGCTGG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCACTCAGTAGGCTGCTaGGCAGAGCCAAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWHSVGC*AEPRQV
Trigger: CACCTGTCTTGGCTCTGCCCAGCAGCCTACTGAGTG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTGGCACAAGGGAACATaGCAAGGACTGGAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWWHKGT*QGLEPV
Trigger: CACAGGCTCCAGTCCTTGTCATGTTCCCTTGTGCCA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGCCCTGCTAACACTTTaGTTTTGGACTTCTGGCATC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGALLTL*FWTSGI
Trigger: GATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGGCTCAAGTCTGAGGTaGAGGGAGGCCGCCGAGCAG +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHGSSLR*REAAEQ
Trigger: CTGCTCGGCGGCCTCCCTGCACCTCAGACTTGAGCC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCTGATGCTGAGTCTCTaGCCTCCTGAGCTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLMLSL*PPELAE
Trigger: CTCTGCCAGCTCAGGAGGCCAGAGACTCAGCATCAG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCACGCATCACCCTGGCTaGTCCGGTTCAGTCCTAGCT +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILTHHPG*SGSVLA
Trigger: AGCTAGGACTGAACCGGACCAGCCAGGGTGATGCGT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGACACAGGCTTCCGATaGGGAAGCTACTTGAGGACC +
Preference number: 2 (lower is better)
Translates to: SACPACSRHPSYRYRTPGDTGFR*GSYLRT
Trigger: GGTCCTCAAGTAGCTTCCCCATCGGAAGCCTGTGTC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGTCGCCGGCCCAGGTTaGGATCAAGAGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHVAGPG*DQEEGG
Trigger: CCCTCCCTCCTCTTGATCCCAACCTGGGCCGGCGAC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTACCTGGGTTCTACAGTaGAGGACCAGTCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPTWVLQ*RTSQGT
Trigger: TGTGCCTTGACTGGTCCTCCACTGTAGAACCCAGGT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTGGAGGTGGGTTCCTaGGAATGGATGAGCCCAAAG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLEVGS*EWMSPK
Trigger: CTTTGGGCTCATCCATTCCCAGGAACCCACCTCCAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTGGGCAGGGCTGTGTTaGGGAGAGGTTGACCCCATC +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACWAGLC*GEVDPI
Trigger: GATGGGGTCAACCTCTCCCCAACACAGCCCTGCCCA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGACATACAGACAGAACTaGGGAGTGCCCCGTCATTGG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWTYRQN*GVPRHW
Trigger: CCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGATGGGGAAGCTACTTaGGGACCCCGCACCAGGCTA +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPDGEAT*GPRTRL
Trigger: TAGCCTGGTGCGGGGTCCTCAAGTAGCTTCCCCATC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTTGGCCCCCAGAGCATaGACCAGTCTGGGAGTCACC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLAPRA*TSLGVT
Trigger: GGTGACTCCCAGACTGGTTCATGCTCTGGGGGCCAA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCCTGGGAAGCATGACTaGTCTCACCATTCTTCCCGG +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILPGKHD*SHHSSR
Trigger: CCGGGAAGAATGGTGAGATCAGTCATGCTTCCCAGG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGTGATGGAAGAGAAGTaGGTGGTTGGGTTTCAGGCA +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPVMEEK*VVGFQA
Trigger: TGCCTGAAACCCAACCACTCACTTCTCTTCCATCAC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAGGGGATGGATGGGTaGAGTGAAGGTAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQGMDG*SEGRHR
Trigger: CCTGTGCCTACCTTCACTTCACCCATCCATCCCCTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGGGAGAGTGGCCACATaGGTCTGCCTAGGAACTTCC +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACGRVAT*VCLGTS
Trigger: GGAAGTTCCTAGGCAGACTCATGTGGCCACTCTCCC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGTGTTGGGGAGAGGTTaGCCCCATCTAGGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPVLGRG*PHLGQS
Trigger: GCTCTGCCCTAGATGGGGTCAACCTCTCCCCAACAC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGACAGAACTGAGGAGTaGCCCGTCATTGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILDRTEE*PVIGTV
Trigger: GACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCAGACTGACATTTGCTaGCTGTCACTCCCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWQTDIC*LSLPLE
Trigger: CTCCAAGGGGAGTGACAGGCAGCAAATGTCAGTCTG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGGACAGAGGTTCACTaGGGCTCCACATTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILRTEVH*GSTFQD
Trigger: GTCCTGGAATGTGGAGCCGCAGTGAACCTCTGTCCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCTGGAAATCCGGGCTaGTGCTGGCAGCCTGTCAGT +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPGNPG*CWQPVS
Trigger: ACTGACAGGCTGCCAGCAGCAGCCCGGATTTCCAGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGTTGGCATAAACAAGTaGTGCCCGCTCAATGGAGGG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWVGINK*CPLNGG
Trigger: CCCTCCATTGAGCGGGCAGCACTTGTTTATGCCAAC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGTCACCAGTACCAGGTaGTACTGGTATCTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWVTSTR*YWYLVG
Trigger: CCCCACAAGATACCAGTAGCACCTGGTACTGGTGAC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGGGACTGGACAGAACTaGCACATCTTGTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWGTGQN*HILSRL
Trigger: CAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCCCAGATGGTACAGCTaGAACCTACCACATACAGAC +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPPRWYS*NLPHTD
Trigger: GTCTGTATGTGGTAGGTTCCAGCTGTACCATCTGGG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTCTTGGCTTTCCAAATaGCAAGGAGGTGCGGGCAGT +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWSWLSK*QGGAGS
Trigger: ACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGGCTGTGGCCGCCCTaGGCTTCCTGTTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGLWPP*ASCSLP
Trigger: GGGCAGTGAACAGGAAGCCCAGGGCGGCCACAGCCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCAGGGTAGTAGACCCTaGCTGCCTCTTCCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACQGSRP*LPLPFL
Trigger: GAGGAAGGGAAGAGGCAGCCAGGGTCTACTACCCTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGCTGGGTCTGCAATTTaGAGGCTGGTTTCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWAGSAI*RLVSVP
Trigger: AGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAACCATCAGCCAGATGTaGTGTTCTTGTTCATGGAAC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGTISQM*CSCSWN
Trigger: GTTCCATGAACAAGAACACCACATCTGGCTGATGGT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAACTCAACTGTCTTCTTaGAAGGTGTCCCAATTCCCA +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGTQLSS*KVSQFP
Trigger: TGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGGGCAGGGCTGTGTTaGGGAGAGGTTGACCCCATC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPWAGLC*GEVDPI
Trigger: GATGGGGTCAACCTCTCCCCAACACAGCCCTGCCCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp CCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTaGGAGTTCAAAGTGATTCCCTTGCAGGTGTGTGCAGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: PHSRTQTDICCLSLP*EFKVIPLQVCAGEG
Trigger: ACCCTCACCTGCACACACCTGCAAGGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGATGGGGAAGCTACTTaGGGACCCCGCACCAGGCTA +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNDGEAT*GPRTRL
Trigger: TAGCCTGGTGCGGGGTCCTCAAGTAGCTTCCCCATC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCACCTGTGTGCAGCTGTaGTGGGACAAGGGCAAACAC +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFTCVQL*WDKGKH
Trigger: GTGTTTGCCCTTGTCCCATCACAGCTGCACACAGGT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGTCAAGGGCTTCTATTaGCTGACAATCCAAGGTAGC +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPVKGFY*LTIQGS
Trigger: GCTACCTTGGATTGTCAGTCAATAGAAGCCCTTGAC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTATACAGCCACAGAACTaGGATCCAGAGCTGTTGGAA +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPIQPQN*DPELLE
Trigger: TTCCAACAGCTCTGGATCTCAGTTCTGTGGCTGTAT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGATCATAGTCAGGCACTaGCCAGAGAGGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWIIVRH*PERTEV
Trigger: AACCTCTGTCCTCTCTGGTCAGTGCCTGACTATGAT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGATTGTAACATCCCCATaGGCAGCTGGACATGAACCC +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWIVTSP*AAGHEP
Trigger: GGGTTCATGTCCAGCTGCTCATGGGGATGTTACAAT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTATTTATTTCCTCCTaGTATCCTGGTACCAGCCTT +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVFISS*YPGTSL
Trigger: AAGGCTGGTACCAGGATATCAGGAGGAAATAAATAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGCACCACGTGCAGCCTaGAGTGCTCTCATTAGTGCT +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFAPRAA*SALISA
Trigger: AGCACTAATGAGAGCACTGCAGGCTGCACGTGGTGC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTTCTCCTCTCCCATCTaGATGCCCAGCCTGCTCTCG +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPFSSPI*MPSLLS
Trigger: CGAGAGCAGGCTGGGCATGCAGATGGGAGAGGAGAA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTGCAGCAGAGACCAATaGAGGTGGGGACAGAGTAGT +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILCSRDQ*RWGQSS
Trigger: ACTACTCTGTCCCCACCTGCATTGGTCTCTGCTGCA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCAGTGGGTGGTGGTTTaGTGCAGCAGTCCTAGGAGC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPQWVVV*CSSPRS
Trigger: GCTCCTAGGACTGCTGCAGCAAACCACCACCCACTG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAATACCATCCAGCCCTaGCAATGGTGCCCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWNTIQP*QWCPSN
Trigger: GTTAGAAGGGCACCATTGGCAGGGCTGGATGGTATT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCACTGCCTGTCTCCATaGCCAAATCAGTCACACGGG +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACHCLSP*PNQSHG
Trigger: CCCGTGTGACTGATTTGGGCATGGAGACAGGCAGTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGGCAGGGTGTGCAGTaGTCCCTAGAAGGCTGGCTA +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGQGVQ*SLEGWL
Trigger: TAGCCAGCCTTCTAGGGAGCACTGCACACCCTGCCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAACCCGCATCCACCTTaGTGGGGGAATAAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILNPHPP*WGNKLH
Trigger: GTGAAGCTTATTCCCCCACCAAGGTGGATGCGGGTT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGGCTGTGGCCGCCCTaGGCTTCCTGTTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGLWPP*ASCSLP
Trigger: GGGCAGTGAACAGGAAGCCCAGGGCGGCCACAGCCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGTTTGGAAGCAGGTTTaGCCCCCAGAGCATGAACCA +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILVWKQV*PPEHEP
Trigger: TGGTTCATGCTCTGGGGGCCAAACCTGCTTCCAAAC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCTAGTCCCAGTAAGCTaGGAGTGTTGGAAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLVPVS*ECWKGN
Trigger: ATTGCCTTTCCAACACTCCCAGCTTACTGGGACTAG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGCTGTAGGTGGGGATaGGAATGGTGGAAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILSCRWG*EWWKVR
Trigger: TCTCACCTTCCACCATTCCCATCCCCACCTACAGCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAACCATTTGGCAGGCTaGGTATGGCCTATGGGGCAT +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILNHLAG*VWPMGH
Trigger: ATGCCCCATAGGCCATACCCAGCCTGCCAAATGGTT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGATGAGGGCAGGGATTaGACTGACACAGCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFDEGRD*TDTAAS
Trigger: GCTTGCAGCTGTGTCAGTCCAATCCCTGCCCTCATC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGGCCACCTGACTCAATaGGTCGCTTCATACGTCACA +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILGHLTQ*VASYVT
Trigger: TGTGACGTATGAAGCGACCCATTGAGTCAGGTGGCC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GTGGCCGCCCTGGGCTTCCTGTTCACTGCCCAGATAATCCTGCTATaGCTCTGCTTGGGGACAGATTTCCCTTTTGTATCAGGTCACATG +
Preference number: 2 (lower is better)
Translates to: VAALGFLFTAQIILL*LCLGTDFPFVSGHM
Trigger: CATGTGACCTGATACAAAAGGGAAATCTGTCCCCAAGCAGAGCAATAGCAGGATTATCTGGGCAGTGAACAGGAAGCCCAGGGCGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp TCTGTTACCCTTCCCAATCCTGGGACTGCCGGAAGCTCCAGGGATTaGATTCTAGGGGTAAAACAGCTGGACCTACAGAGGCCATCCTCA +
Preference number: 2 (lower is better)
Translates to: SVTLPNPGTAGSSRD*ILGVKQLDLQRPSS
Trigger: TGAGGATGGCCTCTGTAGGTCCAGCTGTTTTACCCCTAGAATCAAATCCCTGGAGCTTCCGGCAGTCCCAGGATTGGGAAGGGTAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GGAAAGAAGTCAAGGTCTCCACATCTGAGCCAGGGCACCCTCTGTTaGGAGATGGAGACTCCAGGGTCCCAAAATCAGGCTTTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: GKKSRSPHLSQGTLC*EMETPGSQNQALGK
Trigger: TTTCCCCAAAGCCTGATTTTGGGACCCTGGAGTCTCCATCTCCAAACAGAGGGTGCCCTGGCTCAGATGTGGAGACCTTGACTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCACATACAGACAGAACTaGGGAGTGCCCCGTCATTGG +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFTYRQN*GVPRHW
Trigger: CCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGGACTCCTCAAGGGTaGCAGGCAGGGAAATCTTTT +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILRTPQG*QAGKSF
Trigger: AAAAGATTTCCCTGCCTGTCACCCTTGAGGAGTCCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGGGAACACACACAGGTaGGGGACACAGGCTTCCGAT +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHGNTHR*GTQASD
Trigger: ATCGGAAGCCTGTGTCCCTCACCTGTGTGTGTTCCC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGGAAGCCCATGTATATaGCGGTTTGCTAAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPGSPCI*RFAKSK
Trigger: CTTGCTTTTAGCAAACCGTCATATACATGGGCTTCC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTTCGGGACTCAAGATTaGGAACCAGTGTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILFGTQD*EPVWGK
Trigger: CTTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCACATCCTGGGCCACCTaGCTCAATGGGTCGCTTCAT +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPTSWAT*LNGSLH
Trigger: ATGAAGCGACCCATTGAGTCAGGTGGCCCAGGATGT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGCTCAAGTCTGAGGTaGAGGGAGGCCGCCGAGCAG +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGSSLR*REAAEQ
Trigger: CTGCTCGGCGGCCTCCCTGCACCTCAGACTTGAGCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACCCAAAGGCACCACGTaGAGCCTGCAGTGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTPKGTT*SLQCSH
Trigger: ATGAGAGCACTGCAGGCTGCACGTGGTGCCTTTGGG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCTGCATGCCCAGCCTaGTCTCGGCATCCTTCCTAC +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTSACPA*SRHPSY
Trigger: GTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATTCTCCTCTCCCATCTaGATGCCCAGCCTGCTCTCG +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTFSSPI*MPSLLS
Trigger: CGAGAGCAGGCTGGGCATGCAGATGGGAGAGGAGAA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAACACGGGACCACAGTaGAACATCCAGCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACNTGPQ*NIQQER
Trigger: TCTCTCCTGCTGGATGTTGCACTGTGGTCCCGTGTT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTTAGGAAATGGGAGCTaGATGATCCCAATGAGTGGG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLGNGS*MIPMSG
Trigger: CCCACTCATTGGGATCATGCAGCTCCCATTTCCTAA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGACTCCAAACTGGATaGCATATCAGAAGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWRLQTG*HIRSGG
Trigger: ACCCCCACTTCTGATATGGCATCCAGTTTGGAGTCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAAGGACGCACTTAAGCTaGCAATGCCCCAACCTGGGC +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTRTHLS*QCPNLG
Trigger: GCCCAGGTTGGGGCATTGGCAGCTTAAGTGCGTCCT...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAATAACGCATCACCCTaGCTGGTCCGGTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACNNASP*LVRFSP
Trigger: AGGACTGAACCGGACCAGCCAGGGTGATGCGTTATT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGTCATTGGGACAGTCTaGCTCTTGCTTGTCAAGGGG +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACVIGTV*LLLVKG
Trigger: CCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGAC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGAGTGCCCCGTCATTaGGACAGTCTGGCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGVPRH*DSLALA
Trigger: AGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGACACAGGCTTCCGATaGGGAAGCTACTTGAGGACC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPDTGFR*GSYLRT
Trigger: GGTCCTCAAGTAGCTTCCCCATCGGAAGCCTGTGTC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAACACAGAGGGGCTGTaGCCGCCCTGGGCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFNTEGL*PPWASC
Trigger: ACAGGAAGCCCAGGGCGGCCACAGCCCCTCTGTGTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGAGCATGAACCAGTCTaGGAGTCACCCAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHEHEPV*ESPKVG
Trigger: CCCCACCTTGGGTGACTCCCAGACTGGTTCATGCTC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTCCTTATAAGAAGATaGCCATATGAAGATAGGGAC +
Preference number: 2 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVLIRR*PYEDRD
Trigger: GTCCCTATCTTCATATGGCCATCTTCTTATAAGGAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGACAGCCCAAATGGCTTaGCTTCTGGAAGTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWTAQMA*LLEVSE
Trigger: CTCAGAAACTTCCAGAAGCCAAGCCATTTGGGCTGT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGTCTCTCTTCCCCATTaGGCTTTAGGCTTCAGAACA +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWVSLPH*ALGFRT
Trigger: TGTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGAC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GCTGGAACCTACCACATACAGACAGAACTGAGGAGTGCCCCGTCATaGGGACAGTCTGGCTCTTGCTTGTCAAGGGGAAACAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: AGTYHIQTELRSAPS*GQSGSCLSRGNKSE
Trigger: TTCACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGTGGTAGGTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp AGAGTTTTAAAGTCCAGGGAGTTGGTCCAGCCTTCAGGGCCTGAATaGCCTCCATATCACACAGGCCAAGCAGTCAACATCTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: RVLKSRELVQPSGPE*PPYHTGQAVNICST
Trigger: GGTGGAGCAGATGTTGACTGCTTGGCCTGTGTGATATGGAGGCAATTCAGGCCCTGAAGGCTGGACCAACTCCCTGGACTTTAAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp ATTTCCTTTCTCCCATGGAAGGTTGCAGATGGCAGGATGCTGGATTaGAATCCTAGTCGCGTGGCCTGGAGACAACTCAGGGGACATCTG +
Preference number: 2 (lower is better)
Translates to: ISFLPWKVADGRMLD*NPSRVAWRQLRGHL
Trigger: CAGATGTCCCCTGAGTTGTCTCCAGGCCACGCGACTAGGATTCAAATCCAGCATCCTGCCATCTGCAACCTTCCATGGGAGAAAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATTGGCCCCCAGAGCATaGACCAGTCTGGGAGTCACC +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFILAPRA*TSLGVT
Trigger: GGTGACTCCCAGACTGGTTCATGCTCTGGGGGCCAA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTGGCACAAGGGAACATaGCAAGGACTGGAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNWHKGT*QGLEPV
Trigger: CACAGGCTCCAGTCCTTGTCATGTTCCCTTGTGCCA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGGAATGGTGGAAGGTaGGATAAGGCTGGTTTCGTG +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGNGGR*DKAGFV
Trigger: CACGAAACCAGCCTTATCTCACCTTCCACCATTCCC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGGCAGGGATTGGACTaGCACAGCTGCAAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGQGLD*HSCKPR
Trigger: CCTTGGCTTGCAGCTGTGTCAGTCCAATCCCTGCCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCCTTGGAGTTCAAAGTaGTTCCCTTGCAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFPWSSK*FPCRCV
Trigger: CACACACCTGCAAGGGAATCACTTTGAACTCCAAGG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCAGATCCTGCTTCTGTaGAAGGAGAAGAGTGAGATA +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWQILLL*KEKSEI
Trigger: TATCTCACTCTTCTCCTTTCACAGAAGCAGGATCTG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGGCCCCCATATGCCGTaGCTTCCAGCCCAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIGPHMP*LPAQLL
Trigger: TAACAGCTGGGCTGGAAGTCACGGCATATGGGGGCC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACAGAAGAGCAGTGTCTaGTTAGGAGCAGCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTQKSSV*LGAAQA
Trigger: GGCTTGGGCTGCTCCTAAGCAGACACTGCTCTTCTG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGATCATGCTAGGCCTTaGCAAAGGCTGTGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPDHARP*QRLWLD
Trigger: GTCCAACCACAGCCTTTGGCAAGGCCTAGCATGATC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCAGAGGGCAGCTGTCTaGAAGCCAAAGAAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNQRAAV*KPKKEA
Trigger: GGCCTCTTTCTTTGGCTTGCAGACAGCTGCCCTCTG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAACACGGGACCACAGTaGAACATCCAGCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPNTGPQ*NIQQER
Trigger: TCTCTCCTGCTGGATGTTGCACTGTGGTCCCGTGTT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGCATAAACAAGTGCTaGCCGCTCAATGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGINKC*PLNGGR
Trigger: CCTCCCTCCATTGAGCGGGCAGCACTTGTTTATGCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAACACAGAGGGGCTGTaGCCGCCCTGGGCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTNTEGL*PPWASC
Trigger: ACAGGAAGCCCAGGGCGGCCACAGCCCCTCTGTGTT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCACAGAGTGTTGTGTTaGGATGGGGAGGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACHRVLC*DGEVSI
Trigger: AATGGACACCTCCCCATCCCAACACAACACTCTGTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGGGGCTTGGGGATATaGTGGCACAGTGGAACAAGA +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGGLGI*WHSGTR
Trigger: TCTTGTTCCACTGTGCCACCATATCCCCAAGCCCCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTTCTGGCATCCAGATaGGTGAGAGATGATACATCT +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLLASR*VRDDTS
Trigger: AGATGTATCATCTCTCACCCATCTGGATGCCAGAAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGATGAGGGCAGGGATTaGACTGACACAGCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNDEGRD*TDTAAS
Trigger: GCTTGCAGCTGTGTCAGTCCAATCCCTGCCCTCATC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCACCTGGGTTCTACAGTaGAGGACCAGTCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPTWVLQ*RTSQGT
Trigger: TGTGCCTTGACTGGTCCTCCACTGTAGAACCCAGGT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAAACTGGTAACAGAATaGGTATGGATTGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWKLVTE*VWIAGP
Trigger: AGGCCCTGCAATCCATACCCATTCTGTTACCAGTTT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCCTCTCCCATGTTTCTaGTCCCCCGTGAGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACPLPCF*SPVSFL
Trigger: AAGAAAACTCACGGGGGACCAGAAACATGGGAGAGG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp ACAGAACTGAGGAGTGCCCCGTCATTGGGACAGTCTGGCTCTTGCTaGTCAAGGGGAAACAAGAGTGAACAACGTCAAACACACAGACAC +
Preference number: 2 (lower is better)
Translates to: TELRSAPSLGQSGSC*SRGNKSEQRQTHRH
Trigger: GTGTCTGTGTGTTTGACGTTGTTCACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTaGCCCCATTGGAACGAGAATAAGACTACTGATCTCCCCAAACCA +
Preference number: 2 (lower is better)
Translates to: AGSAIWRLVSVPVPQ*PHWNENKTTDLPKP
Trigger: TGGTTTGGGGAGATCAGTAGTCTTATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp CTCCAAGCCATGGTATGTTGGAGAAGCCACCAACACACAGCAGATTaGACCCCTCCATTGGAAGACACCATCAGCCAGATGTGGTGTTCT +
Preference number: 2 (lower is better)
Translates to: LQAMVCWRSHQHTAD*TPPLEDTISQMWCS
Trigger: AGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTTGGTGGCTTCTCCAACATACCATGGCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GGAAGGTGTCCCAATTCCCAAAGCAATTTTCCAAGATCTGGTCTTTaGCAGTGCCCGACTCGTCCTCTCTGTTACCCTTCCCAATCCTGG +
Preference number: 2 (lower is better)
Translates to: GRCPNSQSNFPRSGL*QCPTRPLCYPSQSW
Trigger: CCAGGATTGGGAAGGGTAACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTGCTTTGGGAATTGGGACACCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTCGGGTTGGGGTGTCTaGAAACAGATATTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILSGWGV*KQIFPK
Trigger: CTTTGGAAATATCTGTTTTCAGACACCCCAACCCGA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCTTCAGGGGGTGCCCTaGATGACGGTGAGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLQGVP*MTVSSK
Trigger: CTTAGAGCTCACCGTCATTCAGGGCACCCCCTGAAG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTGTCATTGTATAGAATaGGTTGCAGGTGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILCHCIE*VAGEAG
Trigger: ACCAGCCTCACCTGCAACTCATTCTATACAATGACA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCATTGTAACATCCCCATaGGCAGCTGGACATGAACCC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPIVTSP*AAGHEP
Trigger: GGGTTCATGTCCAGCTGCTCATGGGGATGTTACAAT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCATCCTGCTATTGCTCTaGTTGGGGACAGATTTCCCT +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACILLLL*LGTDFP
Trigger: AGGGAAATCTGTCCCCAAGCAGAGCAATAGCAGGAT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGAGATACTGGGGATGTaGAGTCACAGAGGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHEILGM*SHRGKA
Trigger: GGCCTTTCCTCTGTGACTGCACATCCCCAGTATCTC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAGTGGGTGGTGGTTTaGTGCAGCAGTCCTAGGAGC +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQWVVV*CSSPRS
Trigger: GCTCCTAGGACTGCTGCAGCAAACCACCACCCACTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTTTCCATCAACCTCCTaGCCCACTACTGGTTTCAAA +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILFPSTS*PTTGFK
Trigger: TTTGAAACCAGTAGTGGGGCAGGAGGTTGATGGAAA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCCAGGCATGATGGTGTaGACCTGTAGTACCAGCAAC +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHPGMMV*TCSTSN
Trigger: GTTGCTGGTACTACAGGTGCACACCATCATGCCTGG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACCTGGAAATCCGGGCTaGTGCTGGCAGCCTGTCAGT +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEPGNPG*CWQPVS
Trigger: ACTGACAGGCTGCCAGCAGCAGCCCGGATTTCCAGG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACTTAACATCCTCCAATaGCCAGGACAGTCGCCACCT +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTLNILQ*PGQSPP
Trigger: AGGTGGCGACTGTCCTGGGCATTGGAGGATGTTAAG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGGGCTTTGAAAACATaGGCAAATGACCCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILRALKT*ANDPEV
Trigger: AACCTCTGGGTCATTTGCCCATGTTTTCAAAGCCCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCTAGTCCCAGTAAGCTaGGAGTGTTGGAAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFLVPVS*ECWKGN
Trigger: ATTGCCTTTCCAACACTCCCAGCTTACTGGGACTAG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGGAAGAGAAGTGAGTaGTTGGGTTTCAGGCACTCA +
Preference number: 2 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFWKRSE*LGFRHS
Trigger: TGAGTGCCTGAAACCCAACCACTCACTTCTCTTCCA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAGGGTAGTAGACCCTaGCTGCCTCTTCCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQGSRP*LPLPFL
Trigger: GAGGAAGGGAAGAGGCAGCCAGGGTCTACTACCCTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGACAGAGTAGTGAAGTaGGGAAAGATCGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILDRVVK*GKIEKS
Trigger: TGACTTCTCGATCTTTCCCCACTTCACTACTCTGTC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTCTCAAGATAATGATTaGCCTGAGCTCCGTGTCTAC +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILSQDND*PELRVY
Trigger: GTAGACACGGAGCTCAGGCCAATCATTATCTTGAGA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCATAGGAATTCCAGCCTaGCACGTAGTAAGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACIGIPA*HVVSAL
Trigger: CAGAGCACTTACTACGTGCCAGGCTGGAATTCCTAT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp TTTGACCCCTCCATTGGAAGACACCATCAGCCAGATGTGGTGTTCTaGTTCATGGAACCACTGTCCACATGGATGGAATCGGGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: FDPSIGRHHQPDVVF*FMEPLSTWMESGSK
Trigger: CTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp CCATGCCCAAATCAGTCACACGGGACTGGACAGAACTGCCACATCTaGTCCAGACTGTCTATGTTGTTGCTTCATTGCTACCAGAGACAG +
Preference number: 2 (lower is better)
Translates to: PCPNQSHGTGQNCHI*SRLSMLLLHCYQRQ
Trigger: CTGTCTCTGGTAGCAATGAAGCAACAACATAGACAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCCGTGTGACTGATTTGGGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAGGAGGTGCGGGCAGTaGGGTGAAAAGGGATGCTAC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKERRCGQ*GEKGCY
Trigger: GTAGCATCCCTTTTCACCTCACTGCCCGCACCTCCT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGGGAACACACACAGGTaGGGGACACAGGCTTCCGAT +
Preference number: 2 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEGNTHR*GTQASD
Trigger: ATCGGAAGCCTGTGTCCCTCACCTGTGTGTGTTCCC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGCTGTTGGAATTCAGTaGTGGGACGTGTTGATTGGG +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNAVGIQ*WDVLIG
Trigger: CCCAATCAACACGTCCCATCACTGAATTCCAACAGC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGGAGAGTGGCCACATaGGTCTGCCTAGGAACTTCC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGRVAT*VCLGTS
Trigger: GGAAGTTCCTAGGCAGACTCATGTGGCCACTCTCCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATGGGAAGGCATGCTGTaGTGGATTAGTGATGTCTGC +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTWEGML*WISDVC
Trigger: GCAGACATCACTAATCCATCACAGCATGCCTTCCCA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGCTTCTGGAAGTTTCTaGGGCCTGAGTTCTAAACCT +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPASGSF*GLSSKP
Trigger: AGGTTTAGAACTCAGGCCTCAGAAACTTCCAGAAGC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCTTGTGGGGAGAGTTaGGGAAGCTGCTTAACATCC +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTSCGES*GSCLTS
Trigger: GGATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACCCAAAGGCACCACGTaGAGCCTGCAGTGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTPKGTT*SLQCSH
Trigger: ATGAGAGCACTGCAGGCTGCACGTGGTGCCTTTGGG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGGCAGGGAAATCTTTTaGAAACGTGTTATCATAGGT +
Preference number: 2 (lower is better)
Translates to: SACPACSRHPSYRYRTPGGREIF*KRVIIG
Trigger: ACCTATGATAACACGTTTGCAAAAGATTTCCCTGCC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGCAAGAGTGAGAAGGTaGCAGTTCTTGTGGACATTT +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACARVRR*QFLWTF
Trigger: AAATGTCCACAAGAACTGGCACCTTCTCACTCTTGC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGGATTAGTGATGTCTaGCAAGAGTACAGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPWISDV*QEYSRG
Trigger: TCCCCTGCTGTACTCTTGGCAGACATCACTAATCCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAGACTCCAAATTGGATaGCATCTTGGAAGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACRLQIG*HLGSGV
Trigger: GACTCCACTTCCAAGATGGCATCCAATTTGGAGTCT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCTGATGCTGAGTCTCTaGCCTCCTGAGCTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHLMLSL*PPELAE
Trigger: CTCTGCCAGCTCAGGAGGCCAGAGACTCAGCATCAG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCAGGTCGGTCGGGGTTaGTACCCTCTGATGCTGAGT +
Preference number: 2 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEQVGRG*YPLMLS
Trigger: ACTCAGCATCAGAGGGTACCAACCCCGACCGACCTG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACAGGTCGGTCGGGGTTaGTACCCTCTGATGCTGAGT +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTQVGRG*YPLMLS
Trigger: ACTCAGCATCAGAGGGTACCAACCCCGACCGACCTG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGTCGCCGGCCCAGGTTaGGATCAAGAGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPVAGPG*DQEEGG
Trigger: CCCTCCCTCCTCTTGATCCCAACCTGGGCCGGCGAC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGGGGCTTCCCCAACATaGTCAGGAAGAGTCGCCGGC +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPGASPT*SGRVAG
Trigger: GCCGGCGACTCTTCCTGACCATGTTGGGGAAGCCCC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCACTCAGTAGGCTGCTaGGCAGAGCCAAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHHSVGC*AEPRQV
Trigger: CACCTGTCTTGGCTCTGCCCAGCAGCCTACTGAGTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAAGGACTGGAGCCTGTaGACCCAAGAAGTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIKDWSL*TQEVLV
Trigger: CACCAGGACTTCTTGGGTCCACAGGCTCCAGTCCTT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAAGGTGCCAGTTCTTGTaGACATTTCAGCTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTRCQFL*TFQLQG
Trigger: ACCCTGCAGCTGAAATGTCCACAAGAACTGGCACCT...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAGAGACCAATGCAGGTaGGGACAGAGTAGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHRDQCR*GQSSEV
Trigger: CACTTCACTACTCTGTCCCCACCTGCATTGGTCTCT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAAAAGCAAGACTGACTaGAACAACTCGCTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACKSKTD*NNSLLS
Trigger: ACTCAGCAGCGAGTTGTTCCAGTCAGTCTTGCTTTT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTTGGCAGGCTGGGTATaGCCTATGGGGCATAGCCTG +
Preference number: 2 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLELAGWV*PMGHSL
Trigger: CAGGCTATGCCCCATAGGCCATACCCAGCCTGCCAA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCATGTAAAAACCATTTaGCAGGCTGGGTATGGCCTA +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACHVKTI*QAGYGL
Trigger: TAGGCCATACCCAGCCTGCCAAATGGTTTTTACATG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCATGGGACGTGTTGATTaGGGCAAGCTTGGTAAGCAT +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPMGRVD*GKLGKH
Trigger: ATGCTTACCAAGCTTGCCCCAATCAACACGTCCCAT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAAGTCAGGGTGTGTCTaGGGATGTTTTTGGATGTCA +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACKSGCV*GCFWMS
Trigger: TGACATCCAAAAACATCCCCAGACACACCCTGACTT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTTCTTAGAAGGGCTGTaGAAGGATGGAGAGAATGAC +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACFLEGL*KDGEND
Trigger: GTCATTCTCTCCATCCTTCCACAGCCCTTCTAAGAA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACCCAAAATCAGGCTTTaGGGAAAGCAGGGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTPKIRL*GKQGKA
Trigger: TGCCTTTCCCTGCTTTCCCCAAAGCCTGATTTTGGG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GTATGTTGGAGAAGCCACCAACACACAGCAGATTTGACCCCTCCATaGGAAGACACCATCAGCCAGATGTGGTGTTCTTGTTCATGGAAC +
Preference number: 2 (lower is better)
Translates to: VCWRSHQHTADLTPP*EDTISQMWCSCSWN
Trigger: GTTCCATGAACAAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTTGGTGGCTTCTCCAACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp CCTTGTTCATCCTGTCGCCCACCACTCAGAAAAGGCCTCTGGTTATaGTTGGCCTGTATTTATTTCCTCCTGATATCCTGGTACCAGCCT +
Preference number: 2 (lower is better)
Translates to: PCSSCRPPLRKGLWL*LACIYFLLISWYQP
Trigger: AGGCTGGTACCAGGATATCAGGAGGAAATAAATACAGGCCAACAATAACCAGAGGCCTTTTCTGAGTGGTGGGCGACAGGATGAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAAAAGGGCTCAAGTCTaGGGTGCAGGGAGGCCGCCG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSKRAQV*GAGRPP
Trigger: CGGCGGCCTCCCTGCACCTCAGACTTGAGCCCTTTT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGAAGTCAAGAGCAAGTaGCTCAGATTCAGGGATGGA +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNEVKSK*LRFRDG
Trigger: TCCATCCCTGAATCTGAGTCACTTGCTCTTGACTTC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATCGCTGCTGAGTCAGTaGCTTATGTGTACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFISLLSQ*LMCTGH
Trigger: GTGCCCTGTACACATAAGTCACTGACTCAGCAGCGA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGGAACAACTCGCTGCTaGGTCAGTGACTTATGTGTA +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNGTTRC*VSDLCV
Trigger: TACACATAAGTCACTGACTCAGCAGCGAGTTGTTCC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGAACAACTCGCTGCTaGGTCAGTGACTTATGTGTA +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGTTRC*VSDLCV
Trigger: TACACATAAGTCACTGACTCAGCAGCGAGTTGTTCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGCTCCTTGGTTTTATaGATAATCTGTATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWSSLVL*IICILE
Trigger: TTCCAGGATACAGATTATTCATAAAACCAAGGAGCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGTCAAGGGCTTCTATTaGCTGACAATCCAAGGTAGC +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHVKGFY*LTIQGS
Trigger: GCTACCTTGGATTGTCAGTCAATAGAAGCCCTTGAC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGCCCTGCTAACACTTTaGTTTTGGACTTCTGGCATC +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNALLTL*FWTSGI
Trigger: GATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCATTCAGGGGTCAAGTaGCAGTCCGCTACAGACAAG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFHSGVK*QSATDK
Trigger: CTTGTCTGTAGCGGACTGTCACTTGACCCCTGAATG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAACATCCTGGGCCACCTaGCTCAATGGGTCGCTTCAT +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKETSWAT*LNGSLH
Trigger: ATGAAGCGACCCATTGAGTCAGGTGGCCCAGGATGT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGCAGCCTGTCAGTTTaGGAACATAAGTTCAAGCTT +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGSLSV*EHKFKL
Trigger: AAGCTTGAACTTATGTTCTCAAACTGACAGGCTGCC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGGAAGAGCACTCACTaGTGTACGCCTCTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGKSTH*CTPLRN
Trigger: GTTCCTGAGAGGCGTACATCAGTGAGTGCTCTTCCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAACATCCTCCCTTTGTaGTCCCCCAACAGGACTCCT +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFNILPL*SPNRTP
Trigger: AGGAGTCCTGTTGGGGGAGCACAAAGGGAGGATGTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAACATCCTCCCTTTGTaGTCCCCCAACAGGACTCCT +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFINILPL*SPNRTP
Trigger: AGGAGTCCTGTTGGGGGAGCACAAAGGGAGGATGTT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACAGAGGGCAGCTGTCTaGAAGCCAAAGAAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEQRAAV*KPKKEA
Trigger: GGCCTCTTTCTTTGGCTTGCAGACAGCTGCCCTCTG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAACCCAGACTGACATTTaGTGCCTGTCACTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFITQTDI*CLSLPL
Trigger: CAAGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGGACAGAGGTTCACTaGGGCTCCACATTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTRTEVH*GSTFQD
Trigger: GTCCTGGAATGTGGAGCCGCAGTGAACCTCTGTCCT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATTAGGAAATGGGAGCTaGATGATCCCAATGAGTGGG +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTLGNGS*MIPMSG
Trigger: CCCACTCATTGGGATCATGCAGCTCCCATTTCCTAA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGGACTGGACAGAACTaGCACATCTTGTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGTGQN*HILSRL
Trigger: CAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCTCAGAAGTCATCTTaGCTTTCCAAATGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPQKSS*LSKWQG
Trigger: TCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTCCAGTTCCTCTCTCTaGCCCTCTAGGAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHSSSSL*PSRREM
Trigger: CATCTCCCTCCTAGAGGGCCAGAGAGAGGAACTGGA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATCCAGTTCCTCTCTCTaGCCCTCTAGGAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSSSSL*PSRREM
Trigger: CATCTCCCTCCTAGAGGGCCAGAGAGAGGAACTGGA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACCATTCTTCCCGGTTTaGAAGCAGGTTTGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTPFFPV*KQVWPP
Trigger: TGGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAACCATTTGGCAGGCTaGGTATGGCCTATGGGGCAT +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFNHLAG*VWPMGH
Trigger: ATGCCCCATAGGCCATACCCAGCCTGCCAAATGGTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGTAGGCCCCAGTGGGTaGTGGTTTGCTGCAGCAGTC +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPVGPSG*WFAAAV
Trigger: GACTGCTGCAGCAAACCACCACCCACTGGGGCCTAC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTGGGTTCCTGGGAATaGATGAGCCCAAAGACTCGT +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVGSWE*MSPKTR
Trigger: ACGAGTCTTTGGGCTCATCCATTCCCAGGAACCCAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCTCTCTCTCTTTCCTaGTTCCAAGTTGCCAATAAG +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPLSLS*FQVANK
Trigger: CTTATTGGCAACTTGGAACCAGGAAAGAGAGAGAGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTGCAGGCTTGGCCTGTaGCCCACTATGGCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSCRLGL*PTMAPR
Trigger: CCTAGGGGCCATAGTGGGCCACAGGCCAAGCCTGCA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp TGTTCATCCTGTCGCCCACCACTCAGAAAAGGCCTCTGGTTATTGTaGGCCTGTATTTATTTCCTCCTGATATCCTGGTACCAGCCTTTC +
Preference number: 2 (lower is better)
Translates to: CSSCRPPLRKGLWLL*ACIYFLLISWYQPF
Trigger: GAAAGGCTGGTACCAGGATATCAGGAGGAAATAAATACAGGCCAACAATAACCAGAGGCCTTTTCTGAGTGGTGGGCGACAGGATGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp ACAGAACTGCCACATCTTGTCCAGACTGTCTATGTTGTTGCTTCATaGCTACCAGAGACAGCCATTCTAACCCGGCCTGACTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: TELPHLVQTVYVVAS*LPETAILTRPDSLL
Trigger: AAGAAGAGAGTCAGGCCGGGTTAGAATGGCTGTCTCTGGTAGCAATGAAGCAACAACATAGACAGTCTGGACAAGATGTGGCAGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp CCTGGATGGCATCTGAATAGAGTGTTCCTTCTCAGCAACAAGACATaGGCAACAAGTGAGAAAGAGAGAGACAGAGACGGAGACAGACAG +
Preference number: 2 (lower is better)
Translates to: PGWHLNRVFLLSNKT*ATSEKERDRDGDRQ
Trigger: CTGTCTGTCTCCGTCTCTGTCTCTCTCTTTCTCACTTGTTGCCAATGTCTTGTTGCTGAGAAGGAACACTCTATTCAGATGCCATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAAGGGGAAACAAGAGTaGACAACGTCAAACACACAG +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNKGKQE*TTSNTQ
Trigger: CTGTGTGTTTGACGTTGTTCACTCTTGTTTCCCCTT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGGGGGTCAGGGCTTTaGAAACATGGGCAAATGACC +
Preference number: 2 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLERGSGL*KHGQMT
Trigger: GGTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAGGGGGTCAGGGCTTTaGAAACATGGGCAAATGACC +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHRGSGL*KHGQMT
Trigger: GGTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTGATGGAAGAGAAGTaGGTGGTTGGGTTTCAGGCA +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVMEEK*VVGFQA
Trigger: TGCCTGAAACCCAACCACTCACTTCTCTTCCATCAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATCGCTGCTGAGTCAGTaGCTTATGTGTACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSLLSQ*LMCTGH
Trigger: GTGCCCTGTACACATAAGTCACTGACTCAGCAGCGA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCTGGAAGAGTTGGGTaGAATTTATGTGCAAATCCA +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPGRVG*NLCANP
Trigger: TGGATTTGCACATAAATTTCACCCAACTCTTCCAGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGGAATGGTGGAAGGTaGGATAAGGCTGGTTTCGTG +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGNGGR*DKAGFV
Trigger: CACGAAACCAGCCTTATCTCACCTTCCACCATTCCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAAGCCACTCAGTGTGTaGCATTTTGTTATTATGGCC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPKPLSV*HFVIMA
Trigger: GGCCATAATAACAAAATGTCACACACTGAGTGGCTT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGCCCTTTCCCACCCCTaGGAGGGAAGAGCACTCACT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSALSHP*EGRALT
Trigger: AGTGAGTGCTCTTCCCTCTCAGGGGTGGGAAAGGGC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATGTGGGCCAGTACATTaGCATTGCCTCCTTCAGTAC +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFICGPVH*HCLLQY
Trigger: GTACTGAAGGAGGCAATGTCAATGTACTGGCCCACA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTGAAAGGAGAAGAGTaGGATAAGGGAGGGTCACTC +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVKGEE*DKGGSL
Trigger: GAGTGACCCTCCCTTATCTCACTCTTCTCCTTTCAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGCCCCCATATGCCGTaGCTTCCAGCCCAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGPHMP*LPAQLL
Trigger: TAACAGCTGGGCTGGAAGTCACGGCATATGGGGGCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGGCAGGGAAATCTTTTaGAAACGTGTTATCATAGGT +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACGREIF*KRVIIG
Trigger: ACCTATGATAACACGTTTGCAAAAGATTTCCCTGCC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATGTGGACATTTCAGCTaGAGGGTAGTAGACCCTGGC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKECGHFS*RVVDPG
Trigger: GCCAGGGTCTACTACCCTGCAGCTGAAATGTCCACA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGATCATGCTAGGCCTTaGCAAAGGCTGTGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEDHARP*QRLWLD
Trigger: GTCCAACCACAGCCTTTGGCAAGGCCTAGCATGATC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATGCAGCAGAGACCAATaGAGGTGGGGACAGAGTAGT +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTCSRDQ*RWGQSS
Trigger: ACTACTCTGTCCCCACCTGCATTGGTCTCTGCTGCA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGATCCTGGCCTGGCTaGAGCAGAGACCAATGCAGG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGSWPG*SRDQCR
Trigger: CCTGCATTGGTCTCTGCTGCAGCCAGGCCAGGATCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCAGACTGACATTTGCTaGCTGTCACTCCCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHQTDIC*LSLPLE
Trigger: CTCCAAGGGGAGTGACAGGCAGCAAATGTCAGTCTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGTGGATTGTTACTCTaGCTCCTAGACATCCTGGGC +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGGLLL*LLDILG
Trigger: GCCCAGGATGTCTAGGAGGCAGAGTAACAATCCACC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTTAAAATGCTGGGTCTaGAATTTGGAGGCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLKCWV*NLEAGF
Trigger: GAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAACCCAGGAGGGACTCTaGCAACCCAGATGTACATTT +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFITQEGL*QPRCTF
Trigger: AAATGTACATCTGGGTTGGCAGAGTCCCTCCTGGGT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACTGGGCCTCAGATCCTaGTTCTGTGAAAGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFILGLRS*FCERRR
Trigger: TCTTCTCCTTTCACAGAAGCAGGATCTGAGGCCCAG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACTGAGAAGAAACATCTaGAGAGCGCTGATAGACTGT +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTLRRNI*RALIDC
Trigger: ACAGTCTATCAGCGCTCTGCAGATGTTTCTTCTCAG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAGACAAACCCAGAATaGCAGCATCTGTGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQTNPE*QHLCED
Trigger: GTCCTCACACAGATGCTGGCATTCTGGGTTTGTCTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCTAACACATAGTAGATaGTCAACAAATCACCCACTG +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACLTHSR*STNHPL
Trigger: CAGTGGGTGATTTGTTGAGCATCTACTATGTGTTAG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTCTTGGCTTTCCAAATaGCAAGGAGGTGCGGGCAGT +
Preference number: 2 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLESWLSK*QGGAGS
Trigger: ACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAACCCGCATCCACCTTaGTGGGGGAATAAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTNPHPP*WGNKLH
Trigger: GTGAAGCTTATTCCCCCACCAAGGTGGATGCGGGTT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGTTTGGAAGCAGGTTTaGCCCCCAGAGCATGAACCA +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHVWKQV*PPEHEP
Trigger: TGGTTCATGCTCTGGGGGCCAAACCTGCTTCCAAAC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTTCAGGAGGGCCCTTTaGGAAACACAGGGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEFRRAL*ETQGFP
Trigger: AGGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGAACATGACAAGGACTaGAGCCTGTGGACCCAAGAA +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIEHDKD*SLWTQE
Trigger: TTCTTGGGTCCACAGGCTCCAGTCCTTGTCATGTTC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGAACATGACAAGGACTaGAGCCTGTGGACCCAAGAA +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFEHDKD*SLWTQE
Trigger: TTCTTGGGTCCACAGGCTCCAGTCCTTGTCATGTTC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGTGCTCATGAATGAATaGAAAAATCAGCTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACVLMNE*KNQLLE
Trigger: CTCCAACAGCTGATTTTTCCATTCATTCATGAGCAC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATGTTCCACAAAGGGCTaGGTTTTCCCCTGGATCACT +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFICSTKG*VFPWIT
Trigger: AGTGATCCAGGGGAAAACCCAGCCCTTTGTGGAACA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCTTCACCCTGTGGACTaGTCCCCTCGGGAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPLHPVD*SPREAH
Trigger: ATGGGCTTCCCGAGGGGACCAGTCCACAGGGTGAAG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGTATCCTGGAAGAGTTaGGTGAAATTTATGTGCAAA +
Preference number: 2 (lower is better)
Translates to: TESISSSSVLSGRRTAILVSWKS*VKFMCK
Trigger: TTTGCACATAAATTTCACCCAACTCTTCCAGGATAC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAATGATCAGCTGTAGGTaGGGATGGGAATGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIMISCR*GWEWWK
Trigger: CTTCCACCATTCCCATCCCCACCTACAGCTGATCAT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTCTCAAGATAATGATTaGCCTGAGCTCCGTGTCTAC +
Preference number: 2 (lower is better)
Translates to: RMGMDCRASRRESGIWVNSQDND*PELRVY
Trigger: GTAGACACGGAGCTCAGGCCAATCATTATCTTGAGA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAAGAGGAGGAGATACTaGGGATGTGCAGTCACAGAG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFKRRRY*GCAVTE
Trigger: CTCTGTGACTGCACATCCCCAGTATCTCCTCCTCTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGCTTGGGGATATGGTaGCACAGTGGAACAAGACCA +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGLGIW*HSGTRP
Trigger: TGGTCTTGTTCCACTGTGCCACCATATCCCCAAGCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGCTGGGTCTGCAATTTaGAGGCTGGTTTCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEAGSAI*RLVSVP
Trigger: AGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTGTGTTTTGATGGGGTaGGGAGTACAATCTATGATA +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACCVLMG*GVQSMI
Trigger: TATCATAGATTGTACTCCCCACCCCATCAAAACACA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp AAGAAAGAGGCCTCACCAGAAACCAACCCTGCTGACACCTTGATCTaGGGACTTCCAGCCTCAAGAATTGTGAGGAATAAATTCGTGTTG +
Preference number: 2 (lower is better)
Translates to: KKEASPETNPADTLI*GLPASRIVRNKFVL
Trigger: CAACACGAATTTATTCCTCACAATTCTTGAGGCTGGAAGTCCCAAGATCAAGGTGTCAGCAGGGTTGGTTTCTGGTGAGGCCTCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp CAGAGGTTGACCTTGTTGGAGATTCAGAAACAAGCCTGGGAAAGCTaGGGAAGAACAGCCTCCTATCAGGCATTTAGAGATTCAACCACA +
Preference number: 2 (lower is better)
Translates to: QRLTLLEIQKQAWES*GRTASYQAFRDSTT
Trigger: TGTGGTTGAATCTCTAAATGCCTGATAGGAGGCTGTTCTTCCCAAGCTTTCCCAGGCTTGTTTCTGAATCTCCAACAAGGTCAACCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GTCTCTCTTCCCCATTGGGCTTTAGGCTTCAGAACAGGTGAGACATaGTATCACTCATCACTGAATGCCCAGGGTCTAACACATAGTAGA +
Preference number: 2 (lower is better)
Translates to: VSLPHWALGFRTGET*YHSSLNAQGLTHSR
Trigger: TCTACTATGTGTTAGACCCTGGGCATTCAGTGATGAGTGATACAATGTCTCACCTGTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCTTCAGGGGGTGCCCTaGATGACGGTGAGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLQGVP*MTVSSK
Trigger: CTTAGAGCTCACCGTCATTCAGGGCACCCCCTGAAG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTGGGGAGGTGTCCATTaGCAAGAGCCATCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSWGGVH*QEPSPA
Trigger: TGCTGGGGATGGCTCTTGTCAATGGACACCTCCCCA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGGGCTTCTATTGACTaGCAATCCAAGGTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFRASID*QSKVAV
Trigger: CACAGCTACCTTGGATTGTCAGTCAATAGAAGCCCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGATTGTAAAAGTTTTTaGCTGTGTGGGCCACATCGT +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTDCKSF*LCGPHR
Trigger: ACGATGTGGCCCACACAGTCAAAAACTTTTACAATC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAGGGGATGGATGGGTaGAGTGAAGGTAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQGMDG*SEGRHR
Trigger: CCTGTGCCTACCTTCACTTCACCCATCCATCCCCTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGCTGTTGGAATTCAGTaGTGGGACGTGTTGATTGGG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHAVGIQ*WDVLIG
Trigger: CCCAATCAACACGTCCCATCACTGAATTCCAACAGC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACTTTGGATAGGGTCATaGGGCACATTCAGGGGTCAA +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELWIGS*GTFRGQ
Trigger: TTGACCCCTGAATGTGCCTCATGACCCTATCCAAAG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATCATAGTCAGGCACTaGCCAGAGAGGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEIIVRH*PERTEV
Trigger: AACCTCTGTCCTCTCTGGTCAGTGCCTGACTATGAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGTGGGCCAGTACATTaGCATTGCCTCCTTCAGTAC +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHCGPVH*HCLLQY
Trigger: GTACTGAAGGAGGCAATGTCAATGTACTGGCCCACA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAACACACAGCAGATTTaGCCCCTCCATTGGAAGACA +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFNTQQI*PLHWKT
Trigger: TGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGGACAGAGGTTCACTaGATTCCAGACAAACCCAGA +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFRTEVH*IPDKPR
Trigger: TCTGGGTTTGTCTGGAATTCAGTGAACCTCTGTCCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGACAGAACTGAGGAGTaGCCCGTCATTGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHDRTEE*PVIGTV
Trigger: GACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTCTGCATGCCCAGCCTaGTCTCGGCATCCTTCCTAC +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSACPA*SRHPSY
Trigger: GTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACCTTCTAACTCCCTGTaGCAGGGTCTTACTCTTACC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEPSNSL*QGLTLT
Trigger: GGTAAGAGTAAGACCCTGGCACAGGGAGTTAGAAGG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGACTCGTTTTTAAAATaGTGGGTCTGCAATTTGGAG +
Preference number: 2 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPDSFLK*WVCNLE
Trigger: CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACACCCAGGAGGGACTCTaGCAACCCAGATGTACATTT +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHTQEGL*QPRCTF
Trigger: AAATGTACATCTGGGTTGGCAGAGTCCCTCCTGGGT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGAGTGCCCCGTCATTaGGACAGTCTGGCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGVPRH*DSLALA
Trigger: AGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCCCAGATGGTACAGCTaGAACCTACCACATACAGAC +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHPRWYS*NLPHTD
Trigger: GTCTGTATGTGGTAGGTTCCAGCTGTACCATCTGGG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCCATTCTTCCCGGTTTaGAAGCAGGTTTGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPPFFPV*KQVWPP
Trigger: TGGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACAGATGTACATTTCCTaGAAATCCGGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEQMYIS*KSGLLL
Trigger: CAGCAGCAGCCCGGATTTCCAGGAAATGTACATCTG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTGGAGGGTCTTTCTCTaGGTTGGGAGCTCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSWRVFL*VGSSCG
Trigger: CCCACAGGAGCTCCCAACCCAGAGAAAGACCCTCCA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp CTGAACAGCAGAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTaGCAGCTCTCCTGCACACCACCACGCACACTGTTATTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: LNSRNFTNLLKKEKP*QLSCTPPRTLLFLK
Trigger: CTTAAGGAATAACAGTGTGCGTGGTGGTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTCTGCTGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp AGCTGGTGGTCCACTAGGACCTCAAGATCTTATCTGGGTGGAAACTaGATTTTGAGCCTTCCATTCAGGGAAGAAACCAAAGAGCAATTG +
Preference number: 2 (lower is better)
Translates to: SWWSTRTSRSYLGGN*ILSLPFREETKEQL
Trigger: CAATTGCTCTTTGGTTTCTTCCCTGAATGGAAGGCTCAAAATCAAGTTTCCACCCAGATAAGATCTTGAGGTCCTAGTGGACCACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTCGGGTTGGGGTGTCTaGAAACAGATATTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFSGWGV*KQIFPK
Trigger: CTTTGGAAATATCTGTTTTCAGACACCCCAACCCGA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCCTGGGAAGCATGACTaGTCTCACCATTCTTCCCGG +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPPGKHD*SHHSSR
Trigger: CCGGGAAGAATGGTGAGATCAGTCATGCTTCCCAGG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGGCTCCTGGGAAGCATaGCTGATCTCACCATTCTTC +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPGSWEA*LISPFF
Trigger: GAAGAATGGTGAGATCAGTCATGCTTCCCAGGAGCC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTGTCATTGTATAGAATaGGTTGCAGGTGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFCHCIE*VAGEAG
Trigger: ACCAGCCTCACCTGCAACTCATTCTATACAATGACA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTACCTGTGTGCAGCTGTaGTGGGACAAGGGCAAACAC +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPTCVQL*WDKGKH
Trigger: GTGTTTGCCCTTGTCCCATCACAGCTGCACACAGGT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGCCAAGGCTTCCTGGTaGATCTTCACCCTGTGGACT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSAKASW*IFTLWT
Trigger: AGTCCACAGGGTGAAGATTCACCAGGAAGCCTTGGC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCATTCAGGGGTCAAGTaGCAGTCCGCTACAGACAAG +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPHSGVK*QSATDK
Trigger: CTTGTCTGTAGCGGACTGTCACTTGACCCCTGAATG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCTGTAAACATTTCTTaGGCACTTACTATGTGCCAG +
Preference number: 2 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTSVNIS*ALTMCQ
Trigger: CTGGCACATAGTAAGTGCTCAAGAAATGTTTACAGA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACAAACTCATTGGGGTTaGTATGGCACCCACAACATG +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTQTHWG*YGTHNM
Trigger: CATGTTGTGGGTGCCATATCAACCCCAATGAGTTTG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGAGTTTTCCATGGAATaGAAGGTCTATGGGACATGC +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFEFSME*KVYGTC
Trigger: GCATGTCCCATAGACCTTTCATTCCATGGAAAACTC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTCCAAGTTCCCTAACTaGGAAGAAACATCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFSKFPN*EETSAE
Trigger: CTCTGCAGATGTTTCTTCTCAGTTAGGGAACTTGGA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAAGTTCAAGCTTCCGTaGAAACTCCCAGTATGGTCC +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEKFKLP*KLPVWS
Trigger: GGACCATACTGGGAGTTTGCACGGAAGCTTGAACTT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGCCATCCTCACCCACTaGCTGTCTCCATGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSAILTH*LSPCPN
Trigger: ATTTGGGCATGGAGACAGGCAGTGGGTGAGGATGGC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGTCATTGGGACAGTCTaGCTCTTGCTTGTCAAGGGG +
Preference number: 2 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHVIGTV*LLLVKG
Trigger: CCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGAC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGGGCTTTGAAAACATaGGCAAATGACCCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFRALKT*ANDPEV
Trigger: AACCTCTGGGTCATTTGCCCATGTTTTCAAAGCCCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAAAATCACAGAGCGTTaGAACCCTAATCTAATAAGA +
Preference number: 2 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACKITER*NPNLIR
Trigger: TCTTATTAGATTAGGGTTCCAACGCTCTGTGATTTT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACTTCTGGCATCCAGATaGGTGAGAGATGATACATCT +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFILLASR*VRDDTS
Trigger: AGATGTATCATCTCTCACCCATCTGGATGCCAGAAG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAATAGGAATTCCAGCCTaGCACGTAGTAAGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTIGIPA*HVVSAL
Trigger: CAGAGCACTTACTACGTGCCAGGCTGGAATTCCTAT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAATCCGGGCTGCTGCTaGCAGCCTGTCAGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSNPGCC*QPVSLR
Trigger: TCTCAAACTGACAGGCTGCCAGCAGCAGCCCGGATT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAAATGGCTTGGCTTCTaGAAGTTTCTGAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHKWLGF*KFLRPE
Trigger: CTCAGGCCTCAGAAACTTCCAGAAGCCAAGCCATTT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACACAGCCCAAATGGCTTaGCTTCTGGAAGTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHTAQMA*LLEVSE
Trigger: CTCAGAAACTTCCAGAAGCCAAGCCATTTGGGCTGT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTATGGAAGGTTGCAGATaGCAGGATGCTGGATTTGAA +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFMEGCR*QDAGFE
Trigger: TTCAAATCCAGCATCCTGCCATCTGCAACCTTCCAT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GCCAAGAGTACAGCAGGGGACACTGGTGGTAGATCCATTACATATTaGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGT +
Preference number: 2 (lower is better)
Translates to: AKSTAGDTGGRSITY*YSLDQIFILLDLRG
Trigger: ACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGTAATGGATCTACCACCAGTGTCCCCTGCTGTACTCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp TGGTCCACTAGGACCTCAAGATCTTATCTGGGTGGAAACTTGATTTaGAGCCTTCCATTCAGGGAAGAAACCAAAGAGCAATTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: WSTRTSRSYLGGNLI*SLPFREETKEQLES
Trigger: TGACTCCAATTGCTCTTTGGTTTCTTCCCTGAATGGAAGGCTCAAAATCAAGTTTCCACCCAGATAAGATCTTGAGGTCCTAGTGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAGGACTCCTCAAGGGTaGCAGGCAGGGAAATCTTTT +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPRTPQG*QAGKSF
Trigger: AAAAGATTTCCCTGCCTGTCACCCTTGAGGAGTCCT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGAAGCCCATGTATATaGCGGTTTGCTAAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGSPCI*RFAKSK
Trigger: CTTGCTTTTAGCAAACCGTCATATACATGGGCTTCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCTCAACCCCATGAGATaGATCCTTCATATTCTTGGT +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLNPMR*ILHILG
Trigger: ACCAAGAATATGAAGGATTCATCTCATGGGGTTGAG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAGAATGGGTATGGATTaGAGGGCCTCGAGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSRMGMD*RASRRE
Trigger: CTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAGAATGGGTATGGATTaGAGGGCCTCGAGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSRMGMD*RASRRE
Trigger: CTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCAAGATCTGGTCTTTTaGAGTGCCCGACTCGTCCTC +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSQDLVF*SARLVL
Trigger: GAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTAGCTGTAGGTGGGGATaGGAATGGTGGAAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSCRWG*EWWKVR
Trigger: TCTCACCTTCCACCATTCCCATCCCCACCTACAGCT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTATGGCACCCACAACATaGTCTGGCAAAGGGGAATCC +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPMAPTT*SGKGES
Trigger: GGATTCCCCTTTGCCAGACCATGTTGTGGGTGCCAT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAATAAGTCTCAGAGGCTaGGATTGTAACATCCCCATG +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEISLRG*DCNIPM
Trigger: CATGGGGATGTTACAATCCCAGCCTCTGAGACTTAT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCAACTACAGCCCAAATaGCTTGGCTTCTGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHQLQPK*LGFWKF
Trigger: AAACTTCCAGAAGCCAAGCCATTTGGGCTGTAGTTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp ACAGCAGGGGACACTGGTGGTAGATCCATTACATATTTGTACTCCTaGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTCTAGA +
Preference number: 2 (lower is better)
Translates to: TAGDTGGRSITYLYS*DQIFILLDLRGPSR
Trigger: TCTAGAAGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGTAATGGATCTACCACCAGTGTCCCCTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCCAAACTGGTGCTCATaGATGAATGGAAAAATCAGC +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHPNWCS*MNGKIS
Trigger: GCTGATTTTTCCATTCATTCATGAGCACCAGTTTGG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAGAAACCAACCCTGCTaGCACCTTGATCTTGGGACT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSRNQPC*HLDLGT
Trigger: AGTCCCAAGATCAAGGTGTCAGCAGGGTTGGTTTCT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCATGACAGCAACAGCCTaGCCTTGTAGACCAGGAATT +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPMTATA*PCRPGI
Trigger: AATTCCTGGTCTACAAGGTCAGGCTGTTGCTGTCAT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGTAGTAAGTGCTCTGTaGATGAGGGCTGTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSVVSAL*MRAVQG
Trigger: ACCCTGAACAGCCCTCATTCACAGAGCACTTACTAC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAAATCACCCACTGAATaGATGGTTGGTGAAGAAATC +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFKSPTE*MVGEEI
Trigger: GATTTCTTCACCAACCATTCATTCAGTGGGTGATTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAATGTGCAAATCCACATaGCCTTTAAAGAAAGCTGAG +
Preference number: 2 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIMCKST*PLKKAE
Trigger: CTCAGCTTTCTTTAAAGGGCATGTGGATTTGCACAT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCAAGCAGTCAACATCTaGTCCACCCTATCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSQAVNI*STLSKD
Trigger: GTCCTTGGATAGGGTGGAGCAGATGTTGACTGCTTG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCAGGCTCCTTTTCCTaGCCTTTATATGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSGSFS*PLYAAP
Trigger: GGGTGCTGCATATAAAGGGCAGGAAAAGGAGCCTGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCTCAGCAAGAGGATCTaGTTCTTAGAAGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLSKRI*FLEGLW
Trigger: CCACAGCCCTTCTAAGAAGCAGATCCTCTTGCTGAG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAGGTGCCAGTTCTTGTaGACATTTCAGCTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSRCQFL*TFQLQG
Trigger: ACCCTGCAGCTGAAATGTCCACAAGAACTGGCACCT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTGCTCATGAATGAATaGAAAAATCAGCTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVLMNE*KNQLLE
Trigger: CTCCAACAGCTGATTTTTCCATTCATTCATGAGCAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTGTTCCACAAAGGGCTaGGTTTTCCCCTGGATCACT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSCSTKG*VFPWIT
Trigger: AGTGATCCAGGGGAAAACCCAGCCCTTTGTGGAACA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCATGATCAGCTGTAGGTaGGGATGGGAATGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSMISCR*GWEWWK
Trigger: CTTCCACCATTCCCATCCCCACCTACAGCTGATCAT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAAAATCACAGAGCGTTaGAACCCTAATCTAATAAGA +
Preference number: 2 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHKITER*NPNLIR
Trigger: TCTTATTAGATTAGGGTTCCAACGCTCTGTGATTTT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCATGGGACGTGTTGATTaGGGCAAGCTTGGTAAGCAT +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPMGRVD*GKLGKH
Trigger: ATGCTTACCAAGCTTGCCCCAATCAACACGTCCCAT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCTCATTGGGGTTGATATaGCACCCACAACATGGTCTG +
Preference number: 2 (lower is better)
Translates to: EISFILPKHFQCMLVPGPSLGLI*HPQHGL
Trigger: CAGACCATGTTGTGGGTGCCATATCAACCCCAATGA...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCTGCAATTTGGAGGCTaGTTTCTGTCCCTGTACCAC +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLQFGG*FLSLYH
Trigger: GTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACATTCAGAAACAAGCCTaGGAAAGCTTGGGAAGAACA +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHIQKQA*ESLGRT
Trigger: TGTTCTTCCCAAGCTTTCCCAGGCTTGTTTCTGAAT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGAACCACTGTCCACATaGATGGAATCGGGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPEPLST*MESGSK
Trigger: CTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTATATACTTTTCACATTaGCCTCCAAGCCATGGTATG +
Preference number: 2 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFIYFSH*PPSHGM
Trigger: CATACCATGGCTTGGAGGCCAATGTGAAAAGTATAT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp GGGAATAAAATCACAGAGCGTTGGAACCCTAATCTAATAAGATTGTaGTCTTTATCAGAAGAGGAGGAGATACTGGGGATGTGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: GNKITERWNPNLIRL*SLSEEEEILGMCSH
Trigger: GTGACTGCACATCCCCAGTATCTCCTCCTCTTCTGATAAAGACAACAATCTTATTAGATTAGGGTTCCAACGCTCTGTGATTTTATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCATACAGCCACAGAACTaGGATCCAGAGCTGTTGGAA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSIQPQN*DPELLE
Trigger: TTCCAACAGCTCTGGATCTCAGTTCTGTGGCTGTAT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATCTGTAAACATTTCTTaGGCACTTACTATGTGCCAG +
Preference number: 2 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKESVNIS*ALTMCQ
Trigger: CTGGCACATAGTAAGTGCTCAAGAAATGTTTACAGA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCAAACTCATTGGGGTTaGTATGGCACCCACAACATG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSQTHWG*YGTHNM
Trigger: CATGTTGTGGGTGCCATATCAACCCCAATGAGTTTG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGCTTCTGGAAGTTTCTaGGGCCTGAGTTCTAAACCT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSASGSF*GLSSKP
Trigger: AGGTTTAGAACTCAGGCCTCAGAAACTTCCAGAAGC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTACTTCAGAGCTCTATaGAAAGGTGCCACACGCCAT +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPYFRAL*KGATRH
Trigger: ATGGCGTGTGGCACCTTTGCATAGAGCTCTGAAGTA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTGGAAGAGAAGTGAGTaGTTGGGTTTCAGGCACTCA +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPWKRSE*LGFRHS
Trigger: TGAGTGCCTGAAACCCAACCACTCACTTCTCTTCCA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACCTTGCCAAAGGCTGTaGTTGGACATTTTAGTTAAT +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTPCQRL*LDILVN
Trigger: ATTAACTAAAATGTCCAACCACAGCCTTTGGCAAGG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTACCCACAACATGGTCTaGCAAAGGGGAATCCCAATA +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPTHNMV*QRGIPI
Trigger: TATTGGGATTCCCCTTTGCCAGACCATGTTGTGGGT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTCGTTTTTAAAATGCTaGGTCTGCAATTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHSFLKC*VCNLEA
Trigger: AGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAAATGGCTTGGCTTCTaGAAGTTTCTGAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSKWLGF*KFLRPE
Trigger: CTCAGGCCTCAGAAACTTCCAGAAGCCAAGCCATTT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCATTTCCTTTCTCCCATaGAAGGTTGCAGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSISFLP*KVADGR
Trigger: CCTGCCATCTGCAACCTTCCATGGGAGAAAGGAAAT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp AAATTCAAGGAATACTCTGGAGGGGCTGCTGATGCTGAGAAAGTGTaGATGAAATCATTATCCACAATAGACAGTGGCTCAAGAAATGCA +
Preference number: 2 (lower is better)
Translates to: KFKEYSGGAADAEKV*MKSLSTIDSGSRNA
Trigger: TGCATTTCTTGAGCCACTGTCTATTGTGGATAATGATTTCATCAACACTTTCTCAGCATCAGCAGCCCCTCCAGAGTATTCCTTGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGCTCCTTGGTTTTATaGATAATCTGTATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSSLVL*IICILE
Trigger: TTCCAGGATACAGATTATTCATAAAACCAAGGAGCT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGGCAGCCTGTCAGTTTaGGAACATAAGTTCAAGCTT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSGSLSV*EHKFKL
Trigger: AAGCTTGAACTTATGTTCTCAAACTGACAGGCTGCC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCAACTGGAGGCTTTTaGAATCCACCAACATACCCA +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSTGGF*NPPTYP
Trigger: TGGGTATGTTGGTGGATTTCAAAAGCCTCCAGTTGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCTGAGAAGAAACATCTaGAGAGCGCTGATAGACTGT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLRRNI*RALIDC
Trigger: ACAGTCTATCAGCGCTCTGCAGATGTTTCTTCTCAG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCCTCAGAAGTCATCTTaGCTTTCCAAATGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSPQKSS*LSKWQG
Trigger: TCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGACAGAGTAGTGAAGTaGGGAAAGATCGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSDRVVK*GKIEKS
Trigger: TGACTTCTCGATCTTTCCCCACTTCACTACTCTGTC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAAAAGCAAGACTGACTaGAACAACTCGCTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSKSKTD*NNSLLS
Trigger: ACTCAGCAGCGAGTTGTTCCAGTCAGTCTTGCTTTT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGTATCCTGGAAGAGTTaGGTGAAATTTATGTGCAAA +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHVSWKS*VKFMCK
Trigger: TTTGCACATAAATTTCACCCAACTCTTCCAGGATAC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTATAAGTCTCAGAGGCTaGGATTGTAACATCCCCATG +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPISLRG*DCNIPM
Trigger: CATGGGGATGTTACAATCCCAGCCTCTGAGACTTAT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTACCATCAGCCAGATGTaGTGTTCTTGTTCATGGAAC +
Preference number: 2 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPTISQM*CSCSWN
Trigger: GTTCCATGAACAAGAACACCACATCTGGCTGATGGT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAATTTTCCAAGATCTaGTCTTTTGCAGTGCCCGAC +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQFSKI*SFAVPD
Trigger: GTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCACTCAACTGTCTTCTTaGAAGGTGTCCCAATTCCCA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSTQLSS*KVSQFP
Trigger: TGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCCTGGAAGAGTTGGGTaGAATTTATGTGCAAATCCA +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSPGRVG*NLCANP
Trigger: TGGATTTGCACATAAATTTCACCCAACTCTTCCAGG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAATGGATCTAAGCAATaGCTTTGGGTTTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSNGSKQ*LWVSSL
Trigger: CAAGCTGGAAACCCAAAGTCATTGCTTAGATCCATT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTTAAAATGCTGGGTCTaGAATTTGGAGGCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLKCWV*NLEAGF
Trigger: GAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCATGTTGTTGCTTCATTaGTACCAGAGACAGCCATTC +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSMLLLH*YQRQPF
Trigger: GAATGGCTGTCTCTGGTAGCAATGAAGCAACAACAT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCAAACACACAAATCTTaGTCGTGTCATTGTATAGAA +
Preference number: 2 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHQTHKS*SCHCIE
Trigger: TTCTATACAATGACACGACCAAGATTTGTGTGTTTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAAACCAAAGAGCAATTaGAGTCAGGCTCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSKPKSN*SQAPFP
Trigger: AGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTTCCTCCTGATATCCTaGTACCAGCCTTTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSFLLIS*YQPFQN
Trigger: ATTTTGGAAAGGCTGGTACCAGGATATCAGGAGGAA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTTCCTCCTGATATCCTaGTACCAGCCTTTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSFLLIS*YQPFQN
Trigger: ATTTTGGAAAGGCTGGTACCAGGATATCAGGAGGAA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCCTCAAAGAATTATCTaGCCCCAAATAGCTCAACAG +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSPQRII*PQIAQQ
Trigger: CTGTTGAGCTATTTGGGGCCAGATAATTCTTTGAGG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGGCAATGTCTGGAGATaGTTTTGGATGTCACACTTT +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSGNVWR*FWMSHF
Trigger: AAAGTGTGACATCCAAAACCATCTCCAGACATTGCC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGCAATGTCTGGAGATaGTTTTGGATGTCACACTTT +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGNVWR*FWMSHF
Trigger: AAAGTGTGACATCCAAAACCATCTCCAGACATTGCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp ATCAAGAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTaGTCCCAGGACCCTTTCAATAATGCAAATCCGGCGAGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: IKKLVSFYLSISNAC*SQDPFNNANPASFP
Trigger: TGGAAAACTCGCCGGATTTGCATTATTGAAAGGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 90 bp TCCATAGATCTACATGAGTTGCAAATTTATATATTTGTGGTTGACTaGCTTCTTGTCTCTCTTCCCCATTGGGCTTTAGGCTTCAGAACA +
Preference number: 2 (lower is better)
Translates to: SIDLHELQIYIFVVD*LLVSLPHWALGFRT
Trigger: TGTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGACAAGAAGCAAGTCAACCACAAATATATAAATTTGCAACTCATGTAGATCTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCTGTCTTTCAAACCCTaGCATATTTATAGAGACAGC +
Preference number: 2 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLSFKP*HIYRDS
Trigger: GCTGTCTCTATAAATATGTCAGGGTTTGAAAGACAG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGTCCTTATAAGAAGATaGCCATATGAAGATAGGGAC +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSVLIRR*PYEDRD
Trigger: GTCCCTATCTTCATATGGCCATCTTCTTATAAGGAC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAAACACACAAATCTTaGTCGTGTCATTGTATAGAA +
Preference number: 2 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQTHKS*SCHCIE
Trigger: TTCTATACAATGACACGACCAAGATTTGTGTGTTTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GGTCCCCAACCCTGCCCGAGGAAAAGGGCTCAAGTCTaGGGTGCAGGGAGGCCGCCGAGCAGTTGTCCAGTG +
Preference number: 3 (lower is better)
Translates to: GPQPCPRKRAQV*GAGRPPSSCPV
Trigger: CACTGGACAACTGCTCGGCGGCCTCCCTGCACCTCAGACTTGAGCCCTTTTCCTCGGGCAGGGTTGGGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TCTGAGGTGCAGGGAGGCCGCCGAGCAGTTGTCCAGTaGTCCCAGGTCGGTCGGGGTTGGTACCCTCTGATG +
Preference number: 3 (lower is better)
Translates to: SEVQGGRRAVVQ*SQVGRGWYPLM
Trigger: CATCAGAGGGTACCAACCCCGACCGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTCCCTGCACCTCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GTCCCCTGGGCCGCACTGATCAATAACGCATCACCCTaGCTGGTCCGGTTCAGTCCTAGCTCGGGGGTCCCC +
Preference number: 3 (lower is better)
Translates to: VPWAALINNASP*LVRFSPSSGVP
Trigger: GGGGACCCCCGAGCTAGGACTGAACCGGACCAGCCAGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CGAGCAGTTGTCCAGTGCTCCCAGGTCGGTCGGGGTTaGTACCCTCTGATGCTGAGTCTCTGGCCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: RAVVQCSQVGRG*YPLMLSLWPPE
Trigger: CTCAGGAGGCCAGAGACTCAGCATCAGAGGGTACCAACCCCGACCGACCTGGGAGCACTGGACAACTGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TTCCTGGAGGGTCTTTCTCTGGGTTGGGAGCTCCTGTaGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: FLEGLSLGWELL*GLGTLLELLPL
Trigger: GAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTCCCAACCCAGAGAAAGACCCTCCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GGCCCTTTCCCACCCCTGAGAGGGAAGAGCACTCACTaGTGTACGCCTCTCAGGAACACGGGACCACAGTGC +
Preference number: 3 (lower is better)
Translates to: GPFPPLRGKSTH*CTPLRNTGPQC
Trigger: GCACTGTGGTCCCGTGTTCCTGAGAGGCGTACATCAGTGAGTGCTCTTCCCTCTCAGGGGTGGGAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp ATCTGTTGTTGTAGGCCCCAGTGGGTGGTGGTTTGCTaGAGCAGTCCTAGGAGCCTCACGGAGGTGAGGGGG +
Preference number: 3 (lower is better)
Translates to: ICCCRPQWVVVC*SSPRSLTEVRG
Trigger: CCCCCTCACCTCCGTGAGGCTCCTAGGACTGCTGCAGCAAACCACCACCCACTGGGGCCTACAACAACAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACAGAATGGGTATGGATaGCAGGGCCTCGAGAAGGGA +
Preference number: 3 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGQNGYG*QGLEKG
Trigger: TCCCTTCTCGAGGCCCTGCAATCCATACCCATTCTG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CTTCCCGGTTTGGAAGCAGGTTTGGCCCCCAGAGCATaGACCAGTCTGGGAGTCACCCAAGGTGGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: LPGLEAGLAPRA*TSLGVTQGGEE
Trigger: CTCTTCCCCACCTTGGGTGACTCCCAGACTGGTTCATGCTCTGGGGGCCAAACCTGCTTCCAAACCGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp AGGGAACACACACAGGTGAGGGACACAGGCTTCCGATaGGGAAGCTACTTGAGGACCCCGCACCAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: REHTQVRDTGFR*GSYLRTPHQAR
Trigger: TCTAGCCTGGTGCGGGGTCCTCAAGTAGCTTCCCCATCGGAAGCCTGTGTCCCTCACCTGTGTGTGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTTAAAGTCCAGGGAGTaGGTCCAGCCTTCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLKSRE*VQPSGP
Trigger: AGGCCCTGAAGGCTGGACCAACTCCCTGGACTTTAA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTGGACATGAACCCCTaGACCTGGAGGTGGGTTCCT +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLDMNP*TWRWVP
Trigger: AGGAACCCACCTCCAGGTCAAGGGGTTCATGTCCAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GCAGTGCTCTCATTAGTGCTGTCCCCTGGGCCGCACTaGTCAATAACGCATCACCCTGGCTGGTCCGGTTCA +
Preference number: 3 (lower is better)
Translates to: AVLSLVLSPGPH*SITHHPGWSGS
Trigger: TGAACCGGACCAGCCAGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGACAGCACTAATGAGAGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CCCGCTGCATCTTGGGGCAAGCTGGCCTTCTTCCGCTaGAACAAGTTCTCTCCCCCTCCAACTTCCTGTTCC +
Preference number: 3 (lower is better)
Translates to: PAASWGKLAFFR*NKFSPPPTSCS
Trigger: GGAACAGGAAGTTGGAGGGGGAGAGAACTTGTTTCAGCGGAAGAAGGCCAGCTTGCCCCAAGATGCAGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp CATGGGCAAATGACCCAGAGGTTCTCCTCTCCCATCTaGATGCCCAGCCTGCTCTCGGCATCCTTCCTACAG +
Preference number: 3 (lower is better)
Translates to: HGQMTQRFSSPI*MPSLLSASFLQ
Trigger: CTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGATGGGAGAGGAGAACCTCTGGGTCATTTGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TACATCTGTTGTTGTAGGCCCCAGTGGGTGGTGGTTTaGTGCAGCAGTCCTAGGAGCCTCACGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: YICCCRPQWVVV*CSSPRSLTEVR
Trigger: CCTCACCTCCGTGAGGCTCCTAGGACTGCTGCAGCAAACCACCACCCACTGGGGCCTACAACAACAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GAGAGAGAGAGAGAGGTCTGTAGAGCCAGAGAGGGATaGAGAGCAGGCCTGAGGTGGCCTGAGTACTGGTCT +
Preference number: 3 (lower is better)
Translates to: EREREVCRAREG*RAGLRWPEYWS
Trigger: AGACCAGTACTCAGGCCACCTCAGGCCTGCTCTGCATCCCTCTCTGGCTCTACAGACCTCTCTCTCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAGTCGCCGGCCCAGGTaGGGATCAAGAGGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: RMGMDCRASRRESGIWVNSRRPR*GSRGGR
Trigger: CCTCCCTCCTCTTGATCCCAACCTGGGCCGGCGACT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACAGAGGTTGACCTTGTaGGAGATTCAGAAACAAGCC +
Preference number: 3 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGQRLTL*EIQKQA
Trigger: GGCTTGTTTCTGAATCTCCAACAAGGTCAACCTCTG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAATCTTGTGGGGAGAGTaGAGGAAGCTGCTTAACATC +
Preference number: 3 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGILWGE*RKLLNI
Trigger: GATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGAT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCAGGGCACCCTCTGTTaGGAGATGGAGACTCCAGGG +
Preference number: 3 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACQGTLC*EMETPG
Trigger: CCCTGGAGTCTCCATCTCCAAACAGAGGGTGCCCTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATACTGGGGATGTGCAGTCACAGAGGAAAGGCCACGTaGGGTCACGATCAGAGGGCAGCTGTCTGCAAGCCA +
Preference number: 3 (lower is better)
Translates to: ILGMCSHRGKAT*GHDQRAAVCKP
Trigger: TGGCTTGCAGACAGCTGCCCTCTGATCGTGACCTCACGTGGCCTTTCCTCTGTGACTGCACATCCCCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GCCAAGAGCCATAGATGTCCCCAGAAGAGCAGTGTCTaGTTAGGAGCAGCCCAAGCCGGGGTCTTTAGTCCT +
Preference number: 3 (lower is better)
Translates to: AKSHRCPQKSSV*LGAAQAGVFSP
Trigger: AGGACTAAAGACCCCGGCTTGGGCTGCTCCTAAGCAGACACTGCTCTTCTGGGGACATCTATGGCTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TCCTACAGATACAGAACACCAGGGGCTTCCCCAACATaGTCAGGAAGAGTCGCCGGCCCAGGTTGGGATCAA +
Preference number: 3 (lower is better)
Translates to: SYRYRTPGASPT*SGRVAGPGWDQ
Trigger: TTGATCCCAACCTGGGCCGGCGACTCTTCCTGACCATGTTGGGGAAGCCCCTGGTGTTCTGTATCTGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CTGATCTCACCATTCTTCCCGGTTTGGAAGCAGGTTTaGCCCCCAGAGCATGAACCAGTCTGGGAGTCACCC +
Preference number: 3 (lower is better)
Translates to: LISPFFPVWKQV*PPEHEPVWESP
Trigger: GGGTGACTCCCAGACTGGTTCATGCTCTGGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGGTGAGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CTGGGAGTGTTGGAAAGGCAATTCAGGAGGGCCCTTTaGGAAACACAGGGGTTTCCTGTAGCCAGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: LGVLERQFRRAL*ETQGFPVARLL
Trigger: CAGGAGCCTGGCTACAGGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAATTGCCTTTCCAACACTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TGCCCGACTCGTCCTCTCTGTTACCCTTCCCAATCCTaGGACTGCCGGAAGCTCCAGGGATTTGATTCTAGG +
Preference number: 3 (lower is better)
Translates to: CPTRPLCYPSQS*DCRKLQGFDSR
Trigger: CCTAGAATCAAATCCCTGGAGCTTCCGGCAGTCCCAGGATTGGGAAGGGTAACAGAGAGGACGAGTCGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TGTAGAGCCAGAGAGGGATGCAGAGCAGGCCTGAGGTaGCCTGAGTACTGGTCTGACTCCAGCAAGCACAAA +
Preference number: 3 (lower is better)
Translates to: CRAREGCRAGLR*PEYWSDSSKHK
Trigger: TTTGTGCTTGCTGGAGTCAGACCAGTACTCAGGCCACCTCAGGCCTGCTCTGCATCCCTCTCTGGCTCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGGGACAGTCTGGCTCTaGCTTGTCAAGGGGAAACAA +
Preference number: 3 (lower is better)
Translates to: SACPACSRHPSYRYRTPGGTVWL*LVKGKQ
Trigger: TTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCCCTCAGAAGTCATCTaGGCTTTCCAAATGGCAAGG +
Preference number: 3 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPPSEVI*AFQMAR
Trigger: CCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGACAAACATCCTCCCTTaGTGCTCCCCCAACAGGACT +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWTNILP*CSPNRT
Trigger: AGTCCTGTTGGGGGAGCACAAAGGGAGGATGTTTGT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCAGGGGGTCAGGGCTTaGAAAACATGGGCAAATGAC +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWQGVRA*KTWAND
Trigger: GTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCTG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGCCTCTGGTTATTGTaGGCCTGTATTTATTTCCTC +
Preference number: 3 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGLWLL*ACIYFL
Trigger: GAGGAAATAAATACAGGCCAACAATAACCAGAGGCC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATTTGGATGTCACACTTaGGATGTCAACTGGAGGCTT +
Preference number: 3 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGFGCHT*DVNWRL
Trigger: AAGCCTCCAGTTGACATCCAAAGTGTGACATCCAAA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCTaGGCCAGGGCACCCTCTGTTTGGAGATGGAGACTC +
Preference number: 3 (lower is better)
Translates to: EHAGERSQGLHI*ARAPSVWRWRL
Trigger: GAGTCTCCATCTCCAAACAGAGGGTGCCCTGGCTCAGATGTGGAGACCTTGACTTCTTTCCCCAGCATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TTGGGGATATGGTGGCACAGTGGAACAAGACCAGCCTaGAGGGGATGGATGGGTGAAGTGAAGGTAGGCACA +
Preference number: 3 (lower is better)
Translates to: LGIWWHSGTRPA*RGWMGEVKVGT
Trigger: TGTGCCTACCTTCACTTCACCCATCCATCCCCTGCAGGCTGGTCTTGTTCCACTGTGCCACCATATCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp AAAACAGCTGGACCTACAGAGGCCATCCTCACCCACTaGCTGTCTCCATGCCCAAATCAGTCACACGGGACT +
Preference number: 3 (lower is better)
Translates to: KTAGPTEAILTH*LSPCPNQSHGT
Trigger: AGTCCCGTGTGACTGATTTGGGCATGGAGACAGGCAGTGGGTGAGGATGGCCTCTGTAGGTCCAGCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp AAGGCACCCTGTTCCACAAAGGGCTGGGTTTTCCCCTaGATCACTCAGGCCCTGTCCTTAATCCCAAACTGG +
Preference number: 3 (lower is better)
Translates to: KAPCSTKGWVFP*ITQALSLIPNW
Trigger: CCAGTTTGGGATTAAGGACAGGGCCTGAGTGATCCAGGGGAAAACCCAGCCCTTTGTGGAACAGGGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp AGCCAAGGCTTCCTGGTGAATCTTCACCCTGTGGACTaGTCCCCTCGGGAAGCCCATGTATATGACGGTTTG +
Preference number: 3 (lower is better)
Translates to: SQGFLVNLHPVD*SPREAHVYDGL
Trigger: CAAACCGTCATATACATGGGCTTCCCGAGGGGACCAGTCCACAGGGTGAAGATTCACCAGGAAGCCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAGGAGTGCCCCGTCATaGGGACAGTCTGGCTCTTGC +
Preference number: 3 (lower is better)
Translates to: RMGMDCRASRRESGIWVNRSAPS*GQSGSC
Trigger: GCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCCCTCAGAAGTCATCTaGGCTTTCCAAATGGCAAGG +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWPSEVI*AFQMAR
Trigger: CCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCTGGGACACAGAGTGTaGTGTTGGGATGGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLGHRV*CWDGEV
Trigger: CACCTCCCCATCCCAACACAACACTCTGTGTCCCAG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCTCATATCCTGTCTCTaGGCACAAGGGAACATGACA +
Preference number: 3 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLISCL*AQGNMT
Trigger: TGTCATGTTCCCTTGTGCCAAGAGACAGGATATGAG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTTCCTCCGTGTACCTTaGATGATCAGCTGTAGGTGG +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWFLRVP*MISCRW
Trigger: CCACCTACAGCTGATCATCAAAGGTACACGGAGGAA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGACCTCTCTTCTACCTaGTTCATCCTGTCGCCCACC +
Preference number: 3 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACDLSST*FILSPT
Trigger: GGTGGGCGACAGGATGAACAAGGTAGAAGAGAGGTC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GGGGTTTCCTGTAGCCAGGCTCCTGGGAAGCATGACTaGTCTCACCATTCTTCCCGGTTTGGAAGCAGGTTT +
Preference number: 3 (lower is better)
Translates to: GVSCSQAPGKHD*SHHSSRFGSRF
Trigger: AAACCTGCTTCCAAACCGGGAAGAATGGTGAGATCAGTCATGCTTCCCAGGAGCCTGGCTACAGGAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GTGGACCCAAGAAGTCCTGGTGTGATGGAAGAGAAGTaGGTGGTTGGGTTTCAGGCACTCAGTAGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VDPRSPGVMEEK*VVGFQALSRLL
Trigger: CAGCAGCCTACTGAGTGCCTGAAACCCAACCACTCACTTCTCTTCCATCACACCAGGACTTCTTGGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp AGAGAGCGAGAAATGAGAGGCTTGGGGTGGAAACGTTaGCCACCTAAGTCTGGGATCTTCTCTGCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: REREMRGLGWKR*PPKSGIFSAWS
Trigger: GGACCAGGCAGAGAAGATCCCAGACTTAGGTGGTCAACGTTTCCACCCCAAGCCTCTCATTTCTCGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp AGCTGGAACCTACCACATACAGACAGAACTGAGGAGTaGCCCGTCATTGGGACAGTCTGGCTCTTGCTTGTC +
Preference number: 3 (lower is better)
Translates to: SWNLPHTDRTEE*PVIGTVWLLLV
Trigger: GACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGTGGTAGGTTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TCAGGTCACATGCAGGGGGTCAGGGCTTTGAAAACATaGGCAAATGACCCAGAGGTTCTCCTCTCCCATCTG +
Preference number: 3 (lower is better)
Translates to: SGHMQGVRALKT*ANDPEVLLSHL
Trigger: CAGATGGGAGAGGAGAACCTCTGGGTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCTGCATGTGACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CTAGACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTaGAAGGAGGACAGCCATTCTCAACCCCATGAGATG +
Preference number: 3 (lower is better)
Translates to: LDRVHLLQLSPQ*KEDSHSQPHEM
Trigger: CATCTCATGGGGTTGAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCAGTCTGGCTCTTGCTaGTCAAGGGGAAACAAGAGT +
Preference number: 3 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHQSGSC*SRGNKS
Trigger: ACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCACACAGAGTGTTGTGTaGGGATGGGGAGGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFTQSVV*GWGGVH
Trigger: ATGGACACCTCCCCATCCCAACACAACACTCTGTGT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGAAGGTGCCAGTTCTaGTGGACATTTCAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: TESISSSSVLSGRRTAILRRCQF*WTFQLQ
Trigger: CTGCAGCTGAAATGTCCACAAGAACTGGCACCTTCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGTGTCACCAACTGCTTaGGATAGGGTCATGAGGCAC +
Preference number: 3 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACVSPTA*DRVMRH
Trigger: GTGCCTCATGACCCTATCCAAAGCAGTTGGTGACAC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATGGTACAGCTGGAACCTACCACATACAGACAGAACTaGGGAGTGCCCCGTCATTGGGACAGTCTGGCTCTT +
Preference number: 3 (lower is better)
Translates to: MVQLEPTTYRQN*GVPRHWDSLAL
Trigger: AAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGTGGTAGGTTCCAGCTGTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp AGCAAGACTGACTGGAACAACTCGCTGCTGAGTCAGTaGCTTATGTGTACAGGGCACCTGTGTGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: SKTDWNNSLLSQ*LMCTGHLCAAV
Trigger: CACAGCTGCACACAGGTGCCCTGTACACATAAGTCACTGACTCAGCAGCGAGTTGTTCCAGTCAGTCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CCCTGTGGACTGGTCCCCTCGGGAAGCCCATGTATATaGCGGTTTGCTAAAAGCAAGACTGACTGGAACAAC +
Preference number: 3 (lower is better)
Translates to: PCGLVPSGSPCI*RFAKSKTDWNN
Trigger: GTTGTTCCAGTCAGTCTTGCTTTTAGCAAACCGTCATATACATGGGCTTCCCGAGGGGACCAGTCCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATGAGGATAGGGAGGGCATATTTCGGGACTCAAGATTaGGAACCAGTGTGGGGAAAGAAAGCCGGGGATGGG +
Preference number: 3 (lower is better)
Translates to: MRIGRAYFGTQD*EPVWGKKAGDG
Trigger: CCCATCCCCGGCTTTCTTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAAATATGCCCTCCCTATCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CAGATGCTGTGTCACCAACTGCTTTGGATAGGGTCATaGGGCACATTCAGGGGTCAAGTGACAGTCCGCTAC +
Preference number: 3 (lower is better)
Translates to: QMLCHQLLWIGS*GTFRGQVTVRY
Trigger: GTAGCGGACTGTCACTTGACCCCTGAATGTGCCTCATGACCCTATCCAAAGCAGTTGGTGACACAGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATGACTGGAGATTTCAGCCCCTGTCCGTGCAGACGGTaGAAGGCAAGTCCACATTCTCCTTACCTAGACAGC +
Preference number: 3 (lower is better)
Translates to: MTGDFSPCPCRR*KASPHSPYLDS
Trigger: GCTGTCTAGGTAAGGAGAATGTGGACTTGCCTTTCACCGTCTGCACGGACAGGGGCTGAAATCTCCAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp CTGAGGAGTGCCCCGTCATTGGGACAGTCTGGCTCTTaGTTGTCAAGGGGAAACAAGAGTGAACAACGTCAA +
Preference number: 3 (lower is better)
Translates to: LRSAPSLGQSGS*LSRGNKSEQRQ
Trigger: TTGACGTTGTTCACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp AATACATTACATTTGTTGTCCAGGACGCACTTAAGCTaGCAATGCCCCAACCTGGGCAGGGCTGTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: NTLHLLSRTHLS*QCPNLGRAVLG
Trigger: CCCCAACACAGCCCTGCCCAGGTTGGGGCATTGGCAGCTTAAGTGCGTCCTGGACAACAAATGTAATGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GATAGGGACACACAGAGAGATGATGAGGGCAGGGATTaGACTGACACAGCTGCAAGCCAAGGAATGCCAATG +
Preference number: 3 (lower is better)
Translates to: DRDTQRDDEGRD*TDTAASQGMPM
Trigger: CATTGGCATTCCTTGGCTTGCAGCTGTGTCAGTCCAATCCCTGCCCTCATCATCTCTCTGTGTGTCCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATaGGTCGCTTCATACGTCACAGATATTAAACCTGGC +
Preference number: 3 (lower is better)
Translates to: LCLLDILGHLTQ*VASYVTDIKPG
Trigger: GCCAGGTTTAATATCTGTGACGTATGAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CGTAGTAAGTGCTCTGTGAATGAGGGCTGTTCAGGGTaGATTGTTACTCTGCCTCCTAGACATCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: RSKCSVNEGCSG*IVTLPPRHPGP
Trigger: TGGCCCAGGATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCACTTACTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CTAGTCGCGTGGCCTGGAGACAACTCAGGGGACATCTaGCAATGTCTGGAGATGGTTTTGGATGTCACACTT +
Preference number: 3 (lower is better)
Translates to: LVAWPGDNSGDI*QCLEMVLDVTL
Trigger: AAGTGTGACATCCAAAACCATCTCCAGACATTGCCAGATGTCCCCTGAGTTGTCTCCAGGCCACGCGACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CTGCCTGTCTCCATGCCCAAATCAGTCACACGGGACTaGACAGAACTGCCACATCTTGTCCAGACTGTCTAT +
Preference number: 3 (lower is better)
Translates to: LPVSMPKSVTRD*TELPHLVQTVY
Trigger: ATAGACAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCCGTGTGACTGATTTGGGCATGGAGACAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp AGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTaGGGAAAGAAGTCAAGGTCTCCACATCTGAGCCAG +
Preference number: 3 (lower is better)
Translates to: RTPRLTVGTRAC*GKKSRSPHLSQ
Trigger: CTGGCTCAGATGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGATCAGGTAGGGTTTTaGAAGTTCCAGTTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWDQVGF*KFQFLS
Trigger: AGAGAGGAACTGGAACTTCAAAAACCCTACCTGATC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAGTAAGCTGGGAGTGTaGGAAAGGCAATTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACSKLGV*ERQFRR
Trigger: CCTCCTGAATTGCCTTTCCAACACTCCCAGCTTACT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACCTTCAGGGCCTGAATaGCCTCCATATCACACAGGC +
Preference number: 3 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTPSGPE*PPYHTG
Trigger: GCCTGTGTGATATGGAGGCAATTCAGGCCCTGAAGG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGAATGAGACTTCATTaGGAGAGAGGGTCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWRMRLH*ERGSLQ
Trigger: CTGCAAAGACCCTCTCTCCAAATGAAGTCTCATTCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTTCAAAGTGATTCCCTaGCAGGTGTGTGCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFFKVIP*QVCAGE
Trigger: CTCACCTGCACACACCTGCAAGGGAATCACTTTGAA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATTTTCATCTCTACAATaGTGCAACTTTCTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGFSSLQ*CNFLLS
Trigger: ACTGAGGAGAAAGTTGCACAATTGTAGAGATGAAAA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGAGGCCGCCGAGCAGTaGTCCAGTGCTCCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPEAAEQ*SSAPRS
Trigger: CGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGAGGCCGCCGAGCAGTaGTCCAGTGCTCCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSEAAEQ*SSAPRS
Trigger: CGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCTTGGCTCAGTAGCCTaGACTAAGCTGCCACTCGGC +
Preference number: 3 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLGSVA*TKLPLG
Trigger: GCCGAGTGGCAGCTTAGTCAAGGCTACTGAGCCAAG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGAGGCAGGGAAATCTTTaGCAAACGTGTTATCATAGG +
Preference number: 3 (lower is better)
Translates to: SACPACSRHPSYRYRTPGRQGNL*QTCYHR
Trigger: CCTATGATAACACGTTTGCAAAAGATTTCCCTGCCT...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGGACAGATTTCCCTTTaGTATCAGGTCACATGCAGG +
Preference number: 3 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACGQISL*YQVTCR
Trigger: CCTGCATGTGACCTGATACAAAAGGGAAATCTGTCC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAGATAATCCTGCTATaGCTCTGCTTGGGGACAGAT +
Preference number: 3 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQIILL*LCLGTD
Trigger: ATCTGTCCCCAAGCAGAGCAATAGCAGGATTATCTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTACCATTCTTCCCGGTTaGGAAGCAGGTTTGGCCCCC +
Preference number: 3 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFTILPG*EAGLAP
Trigger: GGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGGT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCTCATATCCTGTCTCTaGGCACAAGGGAACATGACA +
Preference number: 3 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFLISCL*AQGNMT
Trigger: TGTCATGTTCCCTTGTGCCAAGAGACAGGATATGAG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTTTCGGGACTCAAGATaGAGAACCAGTGTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFFRDSR*RTSVGK
Trigger: TTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAAA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGTGTCACCAACTGCTTaGGATAGGGTCATGAGGCAC +
Preference number: 3 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHVSPTA*DRVMRH
Trigger: GTGCCTCATGACCCTATCCAAAGCAGTTGGTGACAC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCACAAACTCATTGGGGTaGATATGGCACCCACAACAT +
Preference number: 3 (lower is better)
Translates to: TESISSSSVLSGRRTAILTNSLG*IWHPQH
Trigger: ATGTTGTGGGTGCCATATCAACCCCAATGAGTTTGT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGCTGTTCAGGGTGGATaGTTACTCTGCCTCCTAGAC +
Preference number: 3 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTAVQGG*LLCLLD
Trigger: GTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCAGAGGTTGACCTTGTaGGAGATTCAGAAACAAGCC +
Preference number: 3 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACQRLTL*EIQKQA
Trigger: GGCTTGTTTCTGAATCTCCAACAAGGTCAACCTCTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GTACTTCAGAGCTCTATGCAAAGGTGCCACACGCCATaGCAGGCTCGGGTTGGGGTGTCTGAAAACAGATAT +
Preference number: 3 (lower is better)
Translates to: VLQSSMQRCHTP*QARVGVSENRY
Trigger: ATATCTGTTTTCAGACACCCCAACCCGAGCCTGTCATGGCGTGTGGCACCTTTGCATAGAGCTCTGAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTaGGGTGAAAAGGGATGCTACTCTCAGAGAACAGGA +
Preference number: 3 (lower is better)
Translates to: ILAFQMARRCGQ*GEKGCYSQRTG
Trigger: TCCTGTTCTCTGAGAGTAGCATCCCTTTTCACCTCACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GCCACAGAACTGAGATCCAGAGCTGTTGGAATTCAGTaGTGGGACGTGTTGATTGGGGCAAGCTTGGTAAGC +
Preference number: 3 (lower is better)
Translates to: ATELRSRAVGIQ*WDVLIGASLVS
Trigger: GCTTACCAAGCTTGCCCCAATCAACACGTCCCATCACTGAATTCCAACAGCTCTGGATCTCAGTTCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GCCCAAATGGCTTGGCTTCTGGAAGTTTCTGAGGCCTaGGTTCTAAACCTACCTCTGCCTCTTAGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: AQMAWLLEVSEA*VLNLPLPLRRD
Trigger: GTCCCTTCTAAGAGGCAGAGGTAGGTTTAGAACTCAGGCCTCAGAAACTTCCAGAAGCCAAGCCATTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GACGTTCTAACTTTCCTACTGTACTTCAGAGCTCTATaGAAAGGTGCCACACGCCATGACAGGCTCGGGTTG +
Preference number: 3 (lower is better)
Translates to: DVLTFLLYFRAL*KGATRHDRLGL
Trigger: CAACCCGAGCCTGTCATGGCGTGTGGCACCTTTGCATAGAGCTCTGAAGTACAGTAGGAAAGTTAGAACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GCTGAGTCAGTGACTTATGTGTACAGGGCACCTGTGTaGAGCTGTGATGGGACAAGGGCAAACACACAAATC +
Preference number: 3 (lower is better)
Translates to: AESVTYVYRAPV*SCDGTRANTQI
Trigger: GATTTGTGTGTTTGCCCTTGTCCCATCACAGCTGCACACAGGTGCCCTGTACACATAAGTCACTGACTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TTGCCTCCATATCACACAGGCCAAGCAGTCAACATCTaGTCCACCCTATCCAAGGACAGGGAGTTCTCTACT +
Preference number: 3 (lower is better)
Translates to: LPPYHTGQAVNI*STLSKDREFST
Trigger: AGTAGAGAACTCCCTGTCCTTGGATAGGGTGGAGCAGATGTTGACTGCTTGGCCTGTGTGATATGGAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TGGGGAGAGTTGAGGAAGCTGCTTAACATCCTCCAATaGCCAGGACAGTCGCCACCTCAAAGAATTATCTGG +
Preference number: 3 (lower is better)
Translates to: WGELRKLLNILQ*PGQSPPQRIIW
Trigger: CCAGATAATTCTTTGAGGTGGCGACTGTCCTGGGCATTGGAGGATGTTAAGCAGCTTCCTCAACTCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GTCTTTAGTCCTCTAGTCCCAGTAAGCTGGGAGTGTTaGAAAGGCAATTCAGGAGGGCCCTTTGGGAAACAC +
Preference number: 3 (lower is better)
Translates to: VFSPLVPVSWEC*KGNSGGPFGKH
Trigger: GTGTTTCCCAAAGGGCCCTCCTGAATTGCCTTTCCAACACTCCCAGCTTACTGGGACTAGAGGACTAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GCAGAGACCAATGCAGGTGGGGACAGAGTAGTGAAGTaGGGAAAGATCGAGAAGTCAAGAGCAAGTGACTCA +
Preference number: 3 (lower is better)
Translates to: AETNAGGDRVVK*GKIEKSRASDS
Trigger: TGAGTCACTTGCTCTTGACTTCTCGATCTTTCCCCACTTCACTACTCTGTCCCCACCTGCATTGGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CAGAGCTGTTGGAATTCAGTGATGGGACGTGTTGATTaGGGCAAGCTTGGTAAGCATGACAGCAACAGCCTG +
Preference number: 3 (lower is better)
Translates to: QSCWNSVMGRVD*GKLGKHDSNSL
Trigger: CAGGCTGTTGCTGTCATGCTTACCAAGCTTGCCCCAATCAACACGTCCCATCACTGAATTCCAACAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TTCTTAGAAGGGCTGTGGAAGGATGGAGAGAATGACTaGAGATTTCAGCCCCTGTCCGTGCAGACGGTGAAA +
Preference number: 3 (lower is better)
Translates to: FLEGLWKDGEND*RFQPLSVQTVK
Trigger: TTTCACCGTCTGCACGGACAGGGGCTGAAATCTCCAGTCATTCTCTCCATCCTTCCACAGCCCTTCTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CAGCTCAGCAAGAGGATCTGCTTCTTAGAAGGGCTGTaGAAGGATGGAGAGAATGACTGGAGATTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: QLSKRICFLEGL*KDGENDWRFQP
Trigger: GGGCTGAAATCTCCAGTCATTCTCTCCATCCTTCCACAGCCCTTCTAAGAAGCAGATCCTCTTGCTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCCAGGTCGGTCGGGGTaGGTACCCTCTGATGCTGAG +
Preference number: 3 (lower is better)
Translates to: EISFILPKHFQCMLVPGPPGRSG*VPSDAE
Trigger: CTCAGCATCAGAGGGTACCAACCCCGACCGACCTGG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCAGTCTGGCTCTTGCTaGTCAAGGGGAAACAAGAGT +
Preference number: 3 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHQSGSC*SRGNKS
Trigger: ACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCTTGGCTCAGTAGCCTaGACTAAGCTGCCACTCGGC +
Preference number: 3 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHLGSVA*TKLPLG
Trigger: GCCGAGTGGCAGCTTAGTCAAGGCTACTGAGCCAAG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTGCCAAAGGCTGTGGTaGGACATTTTAGTTAATTCT +
Preference number: 3 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWCQRLW*DILVNS
Trigger: AGAATTAACTAAAATGTCCAACCACAGCCTTTGGCA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGGAAAAATCAGCTGTaGGAGATCATGCTAGGCCTT +
Preference number: 3 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFWKNQL*EIMLGL
Trigger: AAGGCCTAGCATGATCTCCAACAGCTGATTTTTCCA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTCCTCCGTGTACCTTaGATGATCAGCTGTAGGTGG +
Preference number: 3 (lower is better)
Translates to: RMGMDCRASRRESGIWVNFLRVP*MISCRW
Trigger: CCACCTACAGCTGATCATCAAAGGTACACGGAGGAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGAGGGTGTTATAAGTaGTGGTGTCCCCAACAAAAA +
Preference number: 3 (lower is better)
Translates to: TESISSSSVLSGRRTAILRGCYK*WCPQQK
Trigger: TTTTTGTTGGGGACACCACAACTTATAACACCCTCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTTCAAAGTGATTCCCTaGCAGGTGTGTGCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHFKVIP*QVCAGE
Trigger: CTCACCTGCACACACCTGCAAGGGAATCACTTTGAA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCATCTTGTGGGGAGAGTaGAGGAAGCTGCTTAACATC +
Preference number: 3 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPILWGE*RKLLNI
Trigger: GATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGAT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CTTTTGTATCAGGTCACATGCAGGGGGTCAGGGCTTTaGAAACATGGGCAAATGACCCAGAGGTTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: LLYQVTCRGSGL*KHGQMTQRFSS
Trigger: AGAGGAGAACCTCTGGGTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCTGCATGTGACCTGATACAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp AGTGACTTATGTGTACAGGGCACCTGTGTGCAGCTGTaGTGGGACAAGGGCAAACACACAAATCTTGGTCGT +
Preference number: 3 (lower is better)
Translates to: SDLCVQGTCVQL*WDKGKHTNLGR
Trigger: ACGACCAAGATTTGTGTGTTTGCCCTTGTCCCATCACAGCTGCACACAGGTGCCCTGTACACATAAGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ACTTACACACAGGCTGTTCCCATACAGCCACAGAACTaGGATCCAGAGCTGTTGGAATTCAGTGATGGGACG +
Preference number: 3 (lower is better)
Translates to: TYTQAVPIQPQN*DPELLEFSDGT
Trigger: CGTCCCATCACTGAATTCCAACAGCTCTGGATCTCAGTTCTGTGGCTGTATGGGAACAGCCTGTGTGTAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATAGGAATTCCAGCCTGGCACGTAGTAAGTGCTCTGTaGATGAGGGCTGTTCAGGGTGGATTGTTACTCTGC +
Preference number: 3 (lower is better)
Translates to: IGIPAWHVVSAL*MRAVQGGLLLC
Trigger: GCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCACTTACTACGTGCCAGGCTGGAATTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp TGGTATGTTGGAGAAGCCACCAACACACAGCAGATTTaGCCCCTCCATTGGAAGACACCATCAGCCAGATGT +
Preference number: 3 (lower is better)
Translates to: WYVGEATNTQQI*PLHWKTPSARC
Trigger: ACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTTGGTGGCTTCTCCAACATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CAGTGGACAAGAAGGTACTCTCAGCCACCGAGCTGGTaGTTAGAGGTATTTCAAGAGCTCAGGAGTAGAGCT +
Preference number: 3 (lower is better)
Translates to: QWTRRYSQPPSW*LEVFQELRSRA
Trigger: AGCTCTACTCCTGAGCTCTTGAAATACCTCTAATCACCAGCTCGGTGGCTGAGAGTACCTTCTTGTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CCTGGTCCAGGTATGGTCAAGGGCACAGATGTAATGTaGCTTGCCTTATCTGCCCCAGTCAACTTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: PGPGMVKGTDVM*LALSAPVNFCF
Trigger: AAAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCACATTACATCTGTGCCCTTGACCATACCTGGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTaGCCTTTATATGCAGCACCCCCTGACTTCCCAGAA +
Preference number: 3 (lower is better)
Translates to: ETKEQLESGSFS*PLYAAPPDFPE
Trigger: TTCTGGGAAGTCAGGGGGTGCTGCATATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp CCATGCCCAAATCAGTCACACGGGACTGGACAGAACTaGCACATCTTGTCCAGACTGTCTATGTTGTTGCTT +
Preference number: 3 (lower is better)
Translates to: PCPNQSHGTGQN*HILSRLSMLLL
Trigger: AAGCAACAACATAGACAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCCGTGTGACTGATTTGGGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TCCCAAAGCAATTTTCCAAGATCTGGTCTTTTGCAGTaGCCGACTCGTCCTCTCTGTTACCCTTCCCAATCC +
Preference number: 3 (lower is better)
Translates to: SQSNFPRSGLLQ*PTRPLCYPSQS
Trigger: GGATTGGGAAGGGTAACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTGCTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp CCAATTCCCAAAGCAATTTTCCAAGATCTGGTCTTTTaGAGTGCCCGACTCGTCCTCTCTGTTACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: PIPKAIFQDLVF*SARLVLSVTLP
Trigger: GGGAAGGGTAACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTGCTTTGGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GGTCAAGGGCACAGATGTAATGTGACTTGCCTTATCTaGCCCAGTCAACTTCTGCTTTGGGATAGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: GQGHRCNVTCLI*PSQLLLWDREE
Trigger: TTCCTCCCTATCCCAAAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCACATTACATCTGTGCCCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp AACAAACTCATTGGGGTTGATATGGCACCCACAACATaGTCTGGCAAAGGGGAATCCCAATACCATCCAGCC +
Preference number: 3 (lower is better)
Translates to: NKLIGVDMAPTT*SGKGESQYHPA
Trigger: GGCTGGATGGTATTGGGATTCCCCTTTGCCAGACCATGTTGTGGGTGCCATATCAACCCCAATGAGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GAAGACACCATCAGCCAGATGTGGTGTTCTTGTTCATaGAACCACTGTCCACATGGATGGAATCGGGCTCTA +
Preference number: 3 (lower is better)
Translates to: EDTISQMWCSCS*NHCPHGWNRAL
Trigger: TAGAGCCCGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCTGATGGTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TTGACCCCTCCATTGGAAGACACCATCAGCCAGATGTaGTGTTCTTGTTCATGGAACCACTGTCCACATGGA +
Preference number: 3 (lower is better)
Translates to: LTPPLEDTISQM*CSCSWNHCPHG
Trigger: TCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTaGAAGGTGTCCCAATTCCCAAAGCAATTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: SRAEPQPTQLSS*KVSQFPKQFSK
Trigger: CTTGGAAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGGACAGATTTCCCTTTaGTATCAGGTCACATGCAGG +
Preference number: 3 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHGQISL*YQVTCR
Trigger: CCTGCATGTGACCTGATACAAAAGGGAAATCTGTCC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAATTCAGGAGGGCCCTTaGGGAAACACAGGGGTTTCC +
Preference number: 3 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTIQEGP*GNTGVS
Trigger: GGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAAT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTACACAGAGTGTTGTGTaGGGATGGGGAGGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFTQSVV*GWGGVH
Trigger: ATGGACACCTCCCCATCCCAACACAACACTCTGTGT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTGTATCCTGGAAGAGTaGGGTGAAATTTATGTGCAA +
Preference number: 3 (lower is better)
Translates to: TESISSSSVLSGRRTAILCILEE*GEIYVQ
Trigger: TTGCACATAAATTTCACCCAACTCTTCCAGGATACA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATACATGTAAAAACCATTaGGCAGGCTGGGTATGGCCT +
Preference number: 3 (lower is better)
Translates to: RMGMDCRASRRESGIWVNTCKNH*AGWVWP
Trigger: AGGCCATACCCAGCCTGCCAAATGGTTTTTACATGT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAGAGGGTGTTATAAGTaGTGGTGTCCCCAACAAAAA +
Preference number: 3 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACRGCYK*WCPQQK
Trigger: TTTTTGTTGGGGACACCACAACTTATAACACCCTCT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTGATTGGGGCAAGCTaGGTAAGCATGACAGCAACA +
Preference number: 3 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLIGAS*VSMTAT
Trigger: TGTTGCTGTCATGCTTACCAAGCTTGCCCCAATCAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTTTGGATGTCACACTTaGGATGTCAACTGGAGGCTT +
Preference number: 3 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPFGCHT*DVNWRL
Trigger: AAGCCTCCAGTTGACATCCAAAGTGTGACATCCAAA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACAGAACTGCCACATCTaGTCCAGACTGTCTATGTTG +
Preference number: 3 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTQNCHI*SRLSML
Trigger: CAACATAGACAGTCTGGACAAGATGTGGCAGTTCTG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGAAGCTCCAGGGATTaGATTCTAGGGGTAAAACAG +
Preference number: 3 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGSSRD*ILGVKQ
Trigger: CTGTTTTACCCCTAGAATCAAATCCCTGGAGCTTCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp TTGCTAAAAGCAAGACTGACTGGAACAACTCGCTGCTaGGTCAGTGACTTATGTGTACAGGGCACCTGTGTG +
Preference number: 3 (lower is better)
Translates to: LLKARLTGTTRC*VSDLCVQGTCV
Trigger: CACACAGGTGCCCTGTACACATAAGTCACTGACTCAGCAGCGAGTTGTTCCAGTCAGTCTTGCTTTTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATTGGGGCAAGCTTGGTAAGCATGACAGCAACAGCCTaGCCTTGTAGACCAGGAATTCTGGGGAATCTATCT +
Preference number: 3 (lower is better)
Translates to: IGASLVSMTATA*PCRPGILGNLS
Trigger: AGATAGATTCCCCAGAATTCCTGGTCTACAAGGTCAGGCTGTTGCTGTCATGCTTACCAAGCTTGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp TCAAATTTCAAGACAGGGTTCAGAAGTCTCCTCCTCTaGGAATCCTTCCTGGAGGGTCTTTCTCTGGGTTGG +
Preference number: 3 (lower is better)
Translates to: SNFKTGFRSLLL*ESFLEGLSLGW
Trigger: CCAACCCAGAGAAAGACCCTCCAGGAAGGATTCTCAGAGGAGGAGACTTCTGAACCCTGTCTTGAAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GAGGTCACTGGGACCGCAGATTTTCCATCAACCTCCTaGCCCACTACTGGTTTCAAAACTAAACTGGTAACA +
Preference number: 3 (lower is better)
Translates to: EVTGTADFPSTS*PTTGFKTKLVT
Trigger: TGTTACCAGTTTAGTTTTGAAACCAGTAGTGGGGCAGGAGGTTGATGGAAAATCTGCGGTCCCAGTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp CAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTTaGCCCATTGGAACGAGAATAAGACTACTGATCTCC +
Preference number: 3 (lower is better)
Translates to: QFGGWFLSLYHS*PIGTRIRLLIS
Trigger: GGAGATCAGTAGTCTTATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGACAGAAACCAGCCTCCAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp CTGGGAATGGATGAGCCCAAAGACTCGTTTTTAAAATaGTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: LGMDEPKDSFLK*WVCNLEAGFCP
Trigger: GGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TCCAGGTATGGTCAAGGGCACAGATGTAATGTGACTTaGCTTATCTGCCCCAGTCAACTTCTGCTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: SRYGQGHRCNVT*LICPSQLLLWD
Trigger: ATCCCAAAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCACATTACATCTGTGCCCTTGACCATACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GGGGAATCTATCTTCAAGGGCACCTGGGTTCTACAGTaGAGGACCAGTCAAGGCACAAGAGAAAATGTCTTA +
Preference number: 3 (lower is better)
Translates to: GESIFKGTWVLQ*RTSQGTRENVL
Trigger: TAAGACATTTTCTCTTGTGCCTTGACTGGTCCTCCACTGTAGAACCCAGGTGCCCTTGAAGATAGATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGGGACAGTCTGGCTCTaGCTTGTCAAGGGGAAACAA +
Preference number: 3 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEGTVWL*LVKGKQ
Trigger: TTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTAGGAGTGCCCCGTCATaGGGACAGTCTGGCTCTTGC +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPRSAPS*GQSGSC
Trigger: GCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCATGTATATGACGGTTaGCTAAAAGCAAGACTGACT +
Preference number: 3 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFHVYDG*LKARLT
Trigger: AGTCAGTCTTGCTTTTAGCAAACCGTCATATACATG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGCTGACACCTTGATCTaGGGACTTCCAGCCTCAAGA +
Preference number: 3 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEADTLI*GLPASR
Trigger: TCTTGAGGCTGGAAGTCCCAAGATCAAGGTGTCAGC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCACCATCCCAATGACTaGGTTGAAGATGAAAACTCA +
Preference number: 3 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPHHPND*VEDENS
Trigger: TGAGTTTTCATCTTCAACCAAGTCATTGGGATGGTG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATGTCTGGAGATGGTTTaGGATGTCACACTTTGGATG +
Preference number: 3 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTCLEMV*DVTLWM
Trigger: CATCCAAAGTGTGACATCCAAAACCATCTCCAGACA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCACCATTCTTCCCGGTTaGGAAGCAGGTTTGGCCCCC +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSTILPG*EAGLAP
Trigger: GGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGGT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAGTAAGCTGGGAGTGTaGGAAAGGCAATTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKESKLGV*ERQFRR
Trigger: CCTCCTGAATTGCCTTTCCAACACTCCCAGCTTACT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCTGGGACACAGAGTGTaGTGTTGGGATGGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLGHRV*CWDGEV
Trigger: CACCTCCCCATCCCAACACAACACTCTGTGTCCCAG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAGAAGGTGCCAGTTCTaGTGGACATTTCAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHRRCQF*WTFQLQ
Trigger: CTGCAGCTGAAATGTCCACAAGAACTGGCACCTTCT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCTTTGGGTTTCCAGCTaGGCTCTGGGGATGGGGACA +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLWVSS*ALGMGT
Trigger: TGTCCCCATCCCCAGAGCCAAGCTGGAAACCCAAAG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCTTTGGGTTTCCAGCTaGGCTCTGGGGATGGGGACA +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLWVSS*ALGMGT
Trigger: TGTCCCCATCCCCAGAGCCAAGCTGGAAACCCAAAG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATTTCGGGACTCAAGATaGAGAACCAGTGTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIFRDSR*RTSVGK
Trigger: TTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAAA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGGCCCTGCTAACACTTaGATTTTGGACTTCTGGCAT +
Preference number: 3 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIGPANT*ILDFWH
Trigger: ATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGCC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCCAGATGTGGTGTTCTaGTTCATGGAACCACTGTCC +
Preference number: 3 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHPDVVF*FMEPLS
Trigger: GGACAGTGGTTCCATGAACAAGAACACCACATCTGG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAATATTTGTGGTTGACTaGCTTCTTGTCTCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTIFVVD*LLVSLP
Trigger: GGGAAGAGAGACAAGAAGCAAGTCAACCACAAATAT...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAATACATTACATTTGTaGTCCAGGACGCACTTAAGC +
Preference number: 3 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPNTLHL*SRTHLS
Trigger: GCTTAAGTGCGTCCTGGACAACAAATGTAATGTATT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAATGAAGGGACAAGGTaGCTCCACGCTGGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSNEGTR*LHAGLC
Trigger: GCAGAGCCCAGCGTGGAGCAACCTTGTCCCTTCATT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp TTCAGGCCTTGTGGTGAAGCCGTCCCAGAAGATAAATaGTTTTTCTCCAAGCAGGCAGATTACCGAGTAGGA +
Preference number: 3 (lower is better)
Translates to: FRPCGEAVPEDK*FFSKQADYRVG
Trigger: TCCTACTCGGTAATCTGCCTGCTTGGAGAAAAATCATTTATCTTCTGGGACGGCTTCACCACAAGGCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp GTGAAGAAATCTCTGTCAGAGAGGACAGAGGTTCACTaGATTCCAGACAAACCCAGAATGCCAGCATCTGTG +
Preference number: 3 (lower is better)
Translates to: VKKSLSERTEVH*IPDKPRMPASV
Trigger: CACAGATGCTGGCATTCTGGGTTTGTCTGGAATTCAGTGAACCTCTGTCCTCTCTGACAGAGATTTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TTCCTGTTCACTGCCCAGATAATCCTGCTATTGCTCTaGTTGGGGACAGATTTCCCTTTTGTATCAGGTCAC +
Preference number: 3 (lower is better)
Translates to: FLFTAQIILLLL*LGTDFPFVSGH
Trigger: GTGACCTGATACAAAAGGGAAATCTGTCCCCAAGCAGAGCAATAGCAGGATTATCTGGGCAGTGAACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp AGAACTGCCACATCTTGTCCAGACTGTCTATGTTGTTaGTTCATTGCTACCAGAGACAGCCATTCTAACCCG +
Preference number: 3 (lower is better)
Translates to: RTATSCPDCLCC*FIATRDSHSNP
Trigger: CGGGTTAGAATGGCTGTCTCTGGTAGCAATGAAGCAACAACATAGACAGTCTGGACAAGATGTGGCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TCTATAGCCAAGATGCCCATGGACTTCAGGACCCAATaGAGGGCACTAAGAAATAGAGACACATCCTTCACT +
Preference number: 3 (lower is better)
Translates to: SIAKMPMDFRTQ*RALRNRDTSFT
Trigger: AGTGAAGGATGTGTCTCTATTTCTTAGTGCCCTGCATTGGGTCCTGAAGTCCATGGGCATCTTGGCTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp ACTAAACATTGCACTAAACACAAGAAACAACAGGCTTaGTGGCTCAGAGGCACACAAACTGTCCAACAGCCC +
Preference number: 3 (lower is better)
Translates to: TKHCTKHKKQQA*WLRGTQTVQQP
Trigger: GGGCTGTTGGACAGTTTGTGTGCCTCTGAGCCAGCAAGCCTGTTGTTTCTTGTGTTTAGTGCAATGTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTaGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: GMDEPKDSFLKC*VCNLEAGFCPC
Trigger: ACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GATGTGGTGTTCTTGTTCATGGAACCACTGTCCACATaGATGGAATCGGGCTCTAAGCTACCTTTCTCATCT +
Preference number: 3 (lower is better)
Translates to: DVVFLFMEPLST*MESGSKLPFSS
Trigger: AGATGAGAAAGGTAGCTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGCTGACACCTTGATCTaGGGACTTCCAGCCTCAAGA +
Preference number: 3 (lower is better)
Translates to: EISFILPKHFQCMLVPGPADTLI*GLPASR
Trigger: TCTTGAGGCTGGAAGTCCCAAGATCAAGGTGTCAGC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAACCCTGCTGACACCTaGATCTTGGGACTTCCAGCC +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSNPADT*ILGLPA
Trigger: GGCTGGAAGTCCCAAGATCAAGGTGTCAGCAGGGTT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGGCCCTGCTAACACTTaGATTTTGGACTTCTGGCAT +
Preference number: 3 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTGPANT*ILDFWH
Trigger: ATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGCC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATTGATTGGGGCAAGCTaGGTAAGCATGACAGCAACA +
Preference number: 3 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTLIGAS*VSMTAT
Trigger: TGTTGCTGTCATGCTTACCAAGCTTGCCCCAATCAA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCTGCCTGTCACTCCCCTaGGAGTTCAAAGTGATTCCC +
Preference number: 3 (lower is better)
Translates to: EISFILPKHFQCMLVPGPCLSLP*EFKVIP
Trigger: GGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCA...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTGCTGGGTCTGCAATTaGGAGGCTGGTTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSCWVCN*EAGFCP
Trigger: GGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ACAGTCTGGCTCTTGCTTGTCAAGGGGAAACAAGAGTaGACAACGTCAAACACACAGACACACACACACATA +
Preference number: 3 (lower is better)
Translates to: TVWLLLVKGKQE*TTSNTQTHTHI
Trigger: TATGTGTGTGTGTGTCTGTGTGTTTGACGTTGTTCACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ACTCAGGCCCTGTCCTTAATCCCAAACTGGTGCTCATaGATGAATGGAAAAATCAGCTGTTGGAGATCATGC +
Preference number: 3 (lower is better)
Translates to: TQALSLIPNWCS*MNGKISCWRSC
Trigger: GCATGATCTCCAACAGCTGATTTTTCCATTCATTCATGAGCACCAGTTTGGGATTAAGGACAGGGCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp TCTAGTGGTCAATATCAGTCAAGGGCTTCTATTGACTaGCAATCCAAGGTAGCTGTGGAGACAAGTGGATGG +
Preference number: 3 (lower is better)
Translates to: SSGQYQSRASID*QSKVAVETSGW
Trigger: CCATCCACTTGTCTCCACAGCTACCTTGGATTGTCAGTCAATAGAAGCCCTTGACTGATATTGACCACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp AGTGGAAGGAGGACAGCCATTCTCAACCCCATGAGATaGATCCTTCATATTCTTGGTGTTAGGAAATGGGAG +
Preference number: 3 (lower is better)
Translates to: SGRRTAILNPMR*ILHILGVRKWE
Trigger: CTCCCATTTCCTAACACCAAGAATATGAAGGATTCATCTCATGGGGTTGAGAATGGCTGTCCTCCTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp ATGCAAGTCTCAAGATTTCAGCTCAGCAAGAGGATCTaGTTCTTAGAAGGGCTGTGGAAGGATGGAGAGAAT +
Preference number: 3 (lower is better)
Translates to: MQVSRFQLSKRI*FLEGLWKDGEN
Trigger: ATTCTCTCCATCCTTCCACAGCCCTTCTAAGAAGCAGATCCTCTTGCTGAGCTGAAATCTTGAGACTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp CCTTGTTGGAGATTCAGAAACAAGCCTGGGAAAGCTTaGGAAGAACAGCCTCCTATCAGGCATTTAGAGATT +
Preference number: 3 (lower is better)
Translates to: PCWRFRNKPGKA*EEQPPIRHLEI
Trigger: AATCTCTAAATGCCTGATAGGAGGCTGTTCTTCCCAAGCTTTCCCAGGCTTGTTTCTGAATCTCCAACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TCTGTACAAATATACACAGTGGACCCTCCATCCATCTaGCCTTTCTTTCCTGGATGGCATCTGAATAGAGTG +
Preference number: 3 (lower is better)
Translates to: SVQIYTVDPPSI*PFFPGWHLNRV
Trigger: CACTCTATTCAGATGCCATCCAGGAAAGAAAGGCCAGATGGATGGAGGGTCCACTGTGTATATTTGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTACAAACATCCTCCCTTaGTGCTCCCCCAACAGGACT +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPTNILP*CSPNRT
Trigger: AGTCCTGTTGGGGGAGCACAAAGGGAGGATGTTTGT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTGCCTGTCACTCCCCTaGGAGTTCAAAGTGATTCCC +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSCLSLP*EFKVIP
Trigger: GGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGTCTATGGGACATGCTaGGGAAACAAGGTCTTATTT +
Preference number: 3 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIVYGTC*GNKVLF
Trigger: AAATAAGACCTTGTTTCCCAAGCATGTCCCATAGAC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCAAGCCTGGGAAAGCTaGGGAAGAACAGCCTCCTAT +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPQAWES*GRTASY
Trigger: ATAGGAGGCTGTTCTTCCCAAGCTTTCCCAGGCTTG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGATTTGACCCCTCCATaGGAAGACACCATCAGCCAG +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSDLTPP*EDTISQ
Trigger: CTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTATATTTGTGGTTGACTaGCTTCTTGTCTCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFIFVVD*LLVSLP
Trigger: GGGAAGAGAGACAAGAAGCAAGTCAACCACAAATAT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp ATAGAGACAGCAAACACACCACTCCATCAACAGGACTaGTACATTCTTTCCCACACTTCAGGCTGTATTGCA +
Preference number: 3 (lower is better)
Translates to: IETANTPLHQQD*YILSHTSGCIA
Trigger: TGCAATACAGCCTGAAGTGTGGGAAAGAATGTATCAGTCCTGTTGATGGAGTGGTGTGTTTGCTGTCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp GCTGTTGGAGATCATGCTAGGCCTTGCCAAAGGCTGTaGTTGGACATTTTAGTTAATTCTGGAAACAAGAGA +
Preference number: 3 (lower is better)
Translates to: AVGDHARPCQRL*LDILVNSGNKR
Trigger: TCTCTTGTTTCCAGAATTAACTAAAATGTCCAACCACAGCCTTTGGCAAGGCCTAGCATGATCTCCAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp TTTGTGGTTGACTTGCTTCTTGTCTCTCTTCCCCATTaGGCTTTAGGCTTCAGAACAGGTGAGACATTGTAT +
Preference number: 3 (lower is better)
Translates to: FVVDLLLVSLPH*ALGFRTGETLY
Trigger: ATACAATGTCTCACCTGTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGACAAGAAGCAAGTCAACCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGGCAGGGAAATCTTTaGCAAACGTGTTATCATAGG +
Preference number: 3 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLERQGNL*QTCYHR
Trigger: CCTATGATAACACGTTTGCAAAAGATTTCCCTGCCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATCTTGGTCGTGTCATaGTATAGAATGAGTTGCAGG +
Preference number: 3 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEILVVS*YRMSCR
Trigger: CCTGCAACTCATTCTATACAATGACACGACCAAGAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAGGAATAAATTCGTGTaGTTTAAGCCACTCAGTGTG +
Preference number: 3 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIRNKFV*FKPLSV
Trigger: CACACTGAGTGGCTTAAACAACACGAATTTATTCCT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCCAGATGTGGTGTTCTaGTTCATGGAACCACTGTCC +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSPDVVF*FMEPLS
Trigger: GGACAGTGGTTCCATGAACAAGAACACCACATCTGG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTGCCAAAGGCTGTGGTaGGACATTTTAGTTAATTCT +
Preference number: 3 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLECQRLW*DILVNS
Trigger: AGAATTAACTAAAATGTCCAACCACAGCCTTTGGCA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGAAACCAAAGAGCAATaGGAGTCAGGCTCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSETKEQ*ESGSFS
Trigger: GGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCAGAACTGCCACATCTaGTCCAGACTGTCTATGTTG +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSQNCHI*SRLSML
Trigger: CAACATAGACAGTCTGGACAAGATGTGGCAGTTCTG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp AGACATGTTGAAGTCCTCATTCCTAGTACCTCAGAATaGGACTTCATTTGGAGAGAGGGTCTTTGCAGATAT +
Preference number: 3 (lower is better)
Translates to: RHVEVLIPSTSE*DFIWREGLCRY
Trigger: ATATCTGCAAAGACCCTCTCTCCAAATGAAGTCTCATTCTGAGGTACTAGGAATGAGGACTTCAACATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGATCAGGTAGGGTTTTaGAAGTTCCAGTTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSDQVGF*KFQFLS
Trigger: AGAGAGGAACTGGAACTTCAAAAACCCTACCTGATC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAGAATGAGACTTCATTaGGAGAGAGGGTCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSRMRLH*ERGSLQ
Trigger: CTGCAAAGACCCTCTCTCCAAATGAAGTCTCATTCT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTACAAACTCATTGGGGTaGATATGGCACCCACAACAT +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPTNSLG*IWHPQH
Trigger: ATGTTGTGGGTGCCATATCAACCCCAATGAGTTTGT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTATTTCCAATGCATGCTaGTCCCAGGACCCTTTCAAT +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPISNAC*SQDPFN
Trigger: ATTGAAAGGGTCCTGGGACAAGCATGCATTGGAAAT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCTCATTCACAGAGGTaGACCTTGTTGGAGATTCAG +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSHSQR*TLLEIQ
Trigger: CTGAATCTCCAACAAGGTCAACCTCTGTGAATGAGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCTCATTCACAGAGGTaGACCTTGTTGGAGATTCAG +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSHSQR*TLLEIQ
Trigger: CTGAATCTCCAACAAGGTCAACCTCTGTGAATGAGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCCAGACTGTCTATGTaGTTGCTTCATTGCTACCAG +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSRLSM*LLHCYQ
Trigger: CTGGTAGCAATGAAGCAACAACATAGACAGTCTGGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTATCTTGGTCGTGTCATaGTATAGAATGAGTTGCAGG +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPILVVS*YRMSCR
Trigger: CCTGCAACTCATTCTATACAATGACACGACCAAGAT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTCACAGAGGTTGACCTaGTTGGAGATTCAGAAACAA +
Preference number: 3 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSQRLT*LEIQKQ
Trigger: TTGTTTCTGAATCTCCAACAAGGTCAACCTCTGTGA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCACAGAGGTTGACCTaGTTGGAGATTCAGAAACAA +
Preference number: 3 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSQRLT*LEIQKQ
Trigger: TTGTTTCTGAATCTCCAACAAGGTCAACCTCTGTGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCATCCCAATGACTTGGTaGAAGATGAAAACTCAGGTG +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSIPMTW*KMKTQV
Trigger: CACCTGAGTTTTCATCTTCAACCAAGTCATTGGGAT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTATCTGGGTGGAAACTaGATTTTGAGCCTTCCATTC +
Preference number: 3 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSYLGGN*ILSLPF
Trigger: GAATGGAAGGCTCAAAATCAAGTTTCCACCCAGATA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp TGGAAGAGTTGGGTGAAATTTATGTGCAAATCCACATaGCCTTTAAAGAAAGCTGAGATGTTTCTCTCTGCA +
Preference number: 3 (lower is better)
Translates to: WKSWVKFMCKST*PLKKAEMFLSA
Trigger: TGCAGAGAGAAACATCTCAGCTTTCTTTAAAGGGCATGTGGATTTGCACATAAATTTCACCCAACTCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp AGTTTTCCATGGAATGAAAGGTCTATGGGACATGCTTaGGAAACAAGGTCTTATTTAGATCAGGCACATTCT +
Preference number: 3 (lower is better)
Translates to: SFPWNERSMGHA*ETRSYLDQAHS
Trigger: AGAATGTGCCTGATCTAAATAAGACCTTGTTTCCCAAGCATGTCCCATAGACCTTTCATTCCATGGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp GAAAACATGAAACCACCTTCTTACATCAACTCACTCTaGAACAGTCGACACAAACAAACATGGAGAAAAGAA +
Preference number: 3 (lower is better)
Translates to: ENMKPPSYINSL*NSRHKQTWRKE
Trigger: TTCTTTTCTCCATGTTTGTTTGTGTCGACTGTTGCAGAGTGAGTTGATGTAAGAAGGTGGTTTCATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR TCA 72 bp CAAACACACAAATCTTGGTCGTGTCATTGTATAGAATaGGTTGCAGGTGAGGCTGGTAATTATGATGTAAAA +
Preference number: 3 (lower is better)
Translates to: QTHKSWSCHCIE*VAGEAGNYDVK
Trigger: TTTTACATCATAATTACCAGCCTCACCTGCAACTCATTCTATACAATGACACGACCAAGATTTGTGTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR GCA 72 bp AAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATaGTTGTCCCAGGACCCTTTCAATAATGCAAATCCG +
Preference number: 3 (lower is better)
Translates to: KLVSFYLSISNA*LSQDPFNNANP
Trigger: CGGATTTGCATTATTGAAAGGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CCA 72 bp AACATGGAGAAAAGAATATGGACCATCGGTCCGCGTTaGTCTGTACAAGAATTAGTCTTTATATATATAATA +
Preference number: 3 (lower is better)
Translates to: NMEKRIWTIGPR*SVQELVFIYII
Trigger: TATTATATATATAAAGACTAATTCTTGTACAGACCAACGCGGACCGATGGTCCATATTCTTTTCTCCATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATCGGGAGGAGGGCGGTaGGGTCCCCGGGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSGGGR*GPRGLQ
Trigger: CTGAAGCCCCCGGGGACCCCACCGCCCTCCTCCCGA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GGCTCAAGTCTGAGGTGCAGGGAGGCCGCCGAGCAGTaGTCCAGTGCTCCCAGGTCGGTCGGGGTTGGTACC +
Preference number: 4 (lower is better)
Translates to: GSSLRCREAAEQ*SSAPRSVGVGT
Trigger: GGTACCAACCCCGACCGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTCCCTGCACCTCAGACTTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGGCTCTGGGAGAGATaGGTGCGGATCCACGGGGTG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGLWER*VRIHGV
Trigger: CACCCCGTGGATCCGCACCCATCTCTCCCAGAGCCC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTCGCCGGCCCAGGTTaGGATCAAGAGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVAGPG*DQEEGG
Trigger: CCCTCCCTCCTCTTGATCCCAACCTGGGCCGGCGAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGCGGGGTCACGGTGGTaGCGATGTTGGGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWAGSRW*RCWGCA
Trigger: CGCGCACCCCCAACATCGTCACCACCGTGACCCCGC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAGTGCTGGACGCACTTaGACGGGACCCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSAGRT*TGPWGS
Trigger: AGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTAAGCCTGTCCACGTaGGTGTACACAGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVSLST*VYTGAP
Trigger: CGGGGCCCCTGTGTACACCCACGTGGACAGGCTTAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGTGGCCCGACTCCAGTaGCGGGGGCGGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHVARLQ*RGRAQA
Trigger: GGCTTGTGCCCGCCCCCGCCACTGGAGTCGGGCCAC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGGGGGCAGGGAACGGTaGCCCGACTCCAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFGGRER*PDSSGG
Trigger: CCCGCCACTGGAGTCGGGCCACCGTTCCCTGCCCCC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTCGGGAGGAGGGCGGTaGGGTCCCCGGGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSGGGR*GPRGLQ
Trigger: CTGAAGCCCCCGGGGACCCCACCGCCCTCCTCCCGA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCTGGCGAGGAGGGCGTaGAGGACGTCGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGLARRA*RTSWRR
Trigger: CCTCCTCCACGACGTCCTCCACGCCCTCCTCGCCAG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGCGGGGAGCGCTGCTaGGAGGGGATGTTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWSGERC*EGMFSQ
Trigger: CTGCGAGAACATCCCCTCTCAGCAGCGCTCCCCGCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGGATGCTGGCAGGTTaGAGTTCTTCTGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGMLAG*SSSAAV
Trigger: CACGGCAGCAGAAGAACTTCAACCTGCCAGCATCCC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGGAACACACACAGGTaGGGGACACAGGCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGNTHR*GTQASD
Trigger: ATCGGAAGCCTGTGTCCCTCACCTGTGTGTGTTCCC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAGTGCTGGACGCACTTaGACGGGACCCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPSAGRT*TGPWGS
Trigger: AGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGGGCTGTGGCCGCCCTaGGCTTCCTGTTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHGLWPP*ASCSLP
Trigger: GGGCAGTGAACAGGAAGCCCAGGGCGGCCACAGCCC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATGGAGGGTCTTTCTCTaGGTTGGGAGCTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGWRVFL*VGSSCG
Trigger: CCCACAGGAGCTCCCAACCCAGAGAAAGACCCTCCA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGGAAGAGCACTCACTaGTGTACGCCTCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGKSTH*CTPLRN
Trigger: GTTCCTGAGAGGCGTACATCAGTGAGTGCTCTTCCC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGGGGGTGACGGTTGCTaGAATCGCTCCTGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGGGDGC*NRSCLA
Trigger: AGCGAGGCAGGAGCGATTGCAGCAACCGTCACCCCC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTCCGGGGGTGACGGTTaGTGCAATCGCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWSGGDG*CNRSCL
Trigger: GAGGCAGGAGCGATTGCAGCAACCGTCACCCCCGGA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTCTCTGCGAGGGATCTaGGGGGACCAGCGTGGCACT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGSLRGI*GDQRGT
Trigger: AGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCCCGCCTGCCAGCCTaGAGCACCCCAGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSRLPA*STPEML
Trigger: CAGCATTTCTGGGGTGCTGCAGGCTGGCAGGCGGGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACAGAGGGCAGCTGTCTaGAAGCCAAAGAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGQRAAV*KPKKEA
Trigger: GGCCTCTTTCTTTGGCTTGCAGACAGCTGCCCTCTG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACACTGCCTGTCTCCATaGCCAAATCAGTCACACGGG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGHCLSP*PNQSHG
Trigger: CCCGTGTGACTGATTTGGGCATGGAGACAGGCAGTG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGGGGGCAGGGAACGGTaGCCCGACTCCAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNGGRER*PDSSGG
Trigger: CCCGCCACTGGAGTCGGGCCACCGTTCCCTGCCCCC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTGTTCTTCTTCCTCATaGGCGGCGTGCCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILCSSSS*AACPAG
Trigger: CCCCGCCGGGCACGCCGCCCATGAGGAAGAAGAACA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATCTTCTTCTTGGCTTTaGGCGTGTGGGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSSSWL*ACGPRP
Trigger: TGGACGAGGCCCACACGCCCAAAGCCAAGAAGAAGA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAGATGCTGGTCTGGCTaGCCTTGCGTGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPRCWSG*PCVGSS
Trigger: GGAGCTTCCCACGCAAGGCCAGCCAGACCAGCATCT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCCATGCCAGCGGCCGTaGTACACTTGCCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGPCQRP*YTCPKR
Trigger: CCGCTTTGGGCAAGTGTACCACGGCCGCTGGCATGG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGGGGCTTCCCCAACATaGTCAGGAAGAGTCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWGASPT*SGRVAG
Trigger: GCCGGCGACTCTTCCTGACCATGTTGGGGAAGCCCC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCTTCACCCTGTGGACTaGTCCCCTCGGGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLHPVD*SPREAH
Trigger: ATGGGCTTCCCGAGGGGACCAGTCCACAGGGTGAAG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACTGGAGGTGGGTTCCTaGGAATGGATGAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLEVGS*EWMSPK
Trigger: CTTTGGGCTCATCCATTCCCAGGAACCCACCTCCAG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAGGGCACCCTCTGTTTaGAGATGGAGACTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGRAPSV*RWRLQG
Trigger: ACCCTGGAGTCTCCATCTCCAAACAGAGGGTGCCCT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGCCGGGCTCCGGGGGTaGCGGTTGCTGCAATCGCTC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTAGLRG*RLLQSL
Trigger: GAGCGATTGCAGCAACCGTCACCCCCGGAGCCCGGC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAACATACAGACAGAACTaGGGAGTGCCCCGTCATTGG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGTYRQN*GVPRHW
Trigger: CCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGCCCCCATATGCCGTaGCTTCCAGCCCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGPHMP*LPAQLL
Trigger: TAACAGCTGGGCTGGAAGTCACGGCATATGGGGGCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCGGCCGTGGTACACTTaGCCAAAGCGGCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWRPWYT*PKRPFP
Trigger: TGGAAAGGGCCGCTTTGGGCAAGTGTACCACGGCCG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCGAGCAGTTGTCCAGTaGTCCCAGGTCGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHRAVVQ*SQVGRG
Trigger: ACCCCGACCGACCTGGGAGCACTGGACAACTGCTCG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGAGATACTGGGGATGTaGAGTCACAGAGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGEILGM*SHRGKA
Trigger: GGCCTTTCCTCTGTGACTGCACATCCCCAGTATCTC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACAAGATCTGGTCTTTTaGAGTGCCCGACTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGQDLVF*SARLVL
Trigger: GAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCACTTCAGGCTGTATTaGAGGCTTGGCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPHFRLY*RLGLWP
Trigger: GGGCCACAGGCCAAGCCTGCAATACAGCCTGAAGTG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCCCCGTCTCTGTCGTaGGCCACTGGATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSPSLS*ATGWSS
Trigger: ACTGGACCATCCAGTGGCCCACGACAGAGACGGGGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGTAAGCCTGTCCACGTaGGTGTACACAGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILVSLST*VYTGAP
Trigger: CGGGGCCCCTGTGTACACCCACGTGGACAGGCTTAC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGTTCTTCTTCCTCATaGGCGGCGTGCCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFCSSSS*AACPAG
Trigger: CCCCGCCGGGCACGCCGCCCATGAGGAAGAAGAACA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCTGGCGAGGAGGGCGTaGAGGACGTCGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLARRA*RTSWRR
Trigger: CCTCCTCCACGACGTCCTCCACGCCCTCCTCGCCAG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGGAGTGCCCCGTCATTaGGACAGTCTGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPGVPRH*DSLALA
Trigger: AGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAACACAGAGGGGCTGTaGCCGCCCTGGGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHNTEGL*PPWASC
Trigger: ACAGGAAGCCCAGGGCGGCCACAGCCCCTCTGTGTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTTGGCAGGCTGGGTATaGCCTATGGGGCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLAGWV*PMGHSL
Trigger: CAGGCTATGCCCCATAGGCCATACCCAGCCTGCCAA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTGGGCAGGGCTGTGTTaGGGAGAGGTTGACCCCATC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVWAGLC*GEVDPI
Trigger: GATGGGGTCAACCTCTCCCCAACACAGCCCTGCCCA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAGAGCAGGCCTGAGGTaGCCTGAGTACTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPRAGLR*PEYWSD
Trigger: GTCAGACCAGTACTCAGGCCACCTCAGGCCTGCTCT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGCCTGTGGCCCACTATaGCCCCTAGGTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPACGPL*PLGLLQ
Trigger: CTGAAGAAGACCTAGGGGCCATAGTGGGCCACAGGC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTGGTGGGGTGGGGGCTaGTCTTGCCAGAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWWWGGG*SCQRLS
Trigger: AGAGAGTCTCTGGCAAGACCAGCCCCCACCCCACCA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGGACAGCTGCCGGCTaGAGTACTTCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWRTAAG*STSPAC
Trigger: GCAAGCTGGTGAAGTACTTCAGCCGGCAGCTGTCCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCCGATGCAGCGCGGTaGATCCCGGGATCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSDAAR*IPGSSV
Trigger: TACACTTGATCCCGGGATTCACCGCGCTGCATCGGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTTCAGGGGGTGCCCTaGATGACGGTGAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLQGVP*MTVSSK
Trigger: CTTAGAGCTCACCGTCATTCAGGGCACCCCCTGAAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTTGGCCCCCAGAGCATaGACCAGTCTGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILLAPRA*TSLGVT
Trigger: GGTGACTCCCAGACTGGTTCATGCTCTGGGGGCCAA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTGGGGAGGTGTCCATTaGCAAGAGCCATCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWWGGVH*QEPSPA
Trigger: TGCTGGGGATGGCTCTTGTCAATGGACACCTCCCCA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTGGGGAGGTGTCCATTaGCAAGAGCCATCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVWGGVH*QEPSPA
Trigger: TGCTGGGGATGGCTCTTGTCAATGGACACCTCCCCA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGGGAGAGTGGCCACATaGGTCTGCCTAGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWGRVAT*VCLGTS
Trigger: GGAAGTTCCTAGGCAGACTCATGTGGCCACTCTCCC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGGAGAGTGGCCACATaGGTCTGCCTAGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGRVAT*VCLGTS
Trigger: GGAAGTTCCTAGGCAGACTCATGTGGCCACTCTCCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAGTTGGGCAGAAGCCTaGCCAAGGACAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSWAEA*PRTAPP
Trigger: GGGAGGGGCTGTCCTTGGTCAGGCTTCTGCCCAACT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCACGCTGGGCTCTGCTaGGGGTGTAGTGAATGGGGC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFHAGLC*GCSEWG
Trigger: GCCCCATTCACTACACCCTCAGCAGAGCCCAGCGTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGAGGGGGTGTCCTTATaGCACTTGGGCATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILEGVSL*HLGIPP
Trigger: GGGAGGGATGCCCAAGTGTCATAAGGACACCCCCTC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCGTCCAGCTCCGCGTTaGGCTCCTGCAAGGCTACCT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFRPAPR*APARLP
Trigger: AGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCCTCCAGGACCTCCTTaGGCACATCGACGATTCGGA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWPPGPP*AHRRFG
Trigger: TCCGAATCGTCGATGTGCGCAAGGAGGTCCTGGAGG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTCTGGGAGAGATGGGTaGGGATCCACGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACSGRDG*GSTGWA
Trigger: AGCCCACCCCGTGGATCCGCACCCATCTCTCCCAGA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTCCCGCCTGCCAGCCTaGAGCACCCCAGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSRLPA*STPEML
Trigger: CAGCATTTCTGGGGTGCTGCAGGCTGGCAGGCGGGA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCAGTGGGTGGTGGTTTaGTGCAGCAGTCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVQWVVV*CSSPRS
Trigger: GCTCCTAGGACTGCTGCAGCAAACCACCACCCACTG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACTGGGCCTCAGATCCTaGTTCTGTGAAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLGLRS*FCERRR
Trigger: TCTTCTCCTTTCACAGAAGCAGGATCTGAGGCCCAG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCCCTTGCAGCTCTCCTaGACACCACCACGCACACTG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILPLQLS*TPPRTL
Trigger: CAGTGTGCGTGGTGGTGTGCAGGAGAGCTGCAAGGG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCACTGCCTGTCTCCATaGCCAAATCAGTCACACGGG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPHCLSP*PNQSHG
Trigger: CCCGTGTGACTGATTTGGGCATGGAGACAGGCAGTG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATCGTGGGCCACTGGATaGTCCAGTCTTGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSWATG*SSLVWK
Trigger: TTTCCAAACAAGACTGGACCATCCAGTGGCCCACGA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGGCTCTGGGAGAGATaGGTGCGGATCCACGGGGTG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGLWER*VRIHGV
Trigger: CACCCCGTGGATCCGCACCCATCTCTCCCAGAGCCC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGGAGGGGTTGCTGCTaGAGTCTGGCTGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWRRGCC*SLAGKG
Trigger: TCCCTTACCAGCCAGACTCCAGCAGCAACCCCTCCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACCCAGATGGTACAGCTaGAACCTACCACATACAGAC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGPRWYS*NLPHTD
Trigger: GTCTGTATGTGGTAGGTTCCAGCTGTACCATCTGGG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGAGCATGAACCAGTCTaGGAGTCACCCAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVEHEPV*ESPKVG
Trigger: CCCCACCTTGGGTGACTCCCAGACTGGTTCATGCTC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCACTCAGTAGGCTGCTaGGCAGAGCCAAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVHSVGC*AEPRQV
Trigger: CACCTGTCTTGGCTCTGCCCAGCAGCCTACTGAGTG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACTGCAATTTGGAGGCTaGTTTCTGTCCCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLQFGG*FLSLYH
Trigger: GTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGCTACTGGTATCTTGTaGGGAGAGTTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGATGIL*GELRKL
Trigger: CAGCTTCCTCAACTCTCCCCACAAGATACCAGTAGC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCCTAGTCGCGTGGCCTaGAGACAACTCAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWPSRVA*RQLRGH
Trigger: ATGTCCCCTGAGTTGTCTCCAGGCCACGCGACTAGG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTGGGCAGGGCTGTGTTaGGGAGAGGTTGACCCCATC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHWAGLC*GEVDPI
Trigger: GATGGGGTCAACCTCTCCCCAACACAGCCCTGCCCA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGCCTGTGGCCCACTATaGCCCCTAGGTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVACGPL*PLGLLQ
Trigger: CTGAAGAAGACCTAGGGGCCATAGTGGGCCACAGGC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TCCCGACCTTCCCTGCTCGATCTTGGCTCAGTAGCCTaGACTAAGCTGCCACTCGGCTCTGTACCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRPSLLDLGSVA*TKLPLGSVPSS
Trigger: AGAGGAGGGTACAGAGCCGAGTGGCAGCTTAGTCAAGGCTACTGAGCCAAGATCGAGCAGGGAAGGTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGGACAGCTGCCGGCTaGAGTACTTCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILRTAAG*STSPAC
Trigger: GCAAGCTGGTGAAGTACTTCAGCCGGCAGCTGTCCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGCGGGGTCACGGTGGTaGCGATGTTGGGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIAGSRW*RCWGCA
Trigger: CGCGCACCCCCAACATCGTCACCACCGTGACCCCGC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGTGATGATGGCCAGGTaGGGCGGGCTCATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPVMMAR*GGLMQA
Trigger: TGCCTGCATGAGCCCGCCTCACCTGGCCATCATCAC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCAGAAATGTCCAGGGTaGGACAGGCGACGGTTTCGC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILQKCPG*DRRRFR
Trigger: GCGAAACCGTCGCCTGTCTCACCCTGGACATTTCTG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAGGTGCCACACGCCATaGCAGGCTCGGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNRCHTP*QARVGV
Trigger: CACCCCAACCCGAGCCTGTCATGGCGTGTGGCACCT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGCAGGATGCTGGATTTaGATCCTAGTCGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGAGCWI*ILVAWP
Trigger: AGGCCACGCGACTAGGATTCAAATCCAGCATCCTGC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGATGCAGAGCAGGCCTaGGGTGGCCTGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACDAEQA*GGLSTG
Trigger: ACCAGTACTCAGGCCACCTCAGGCCTGCTCTGCATC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGATGCAGAGCAGGCCTaGGGTGGCCTGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFDAEQA*GGLSTG
Trigger: ACCAGTACTCAGGCCACCTCAGGCCTGCTCTGCATC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGAGGGGGTGTCCTTATaGCACTTGGGCATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFEGVSL*HLGIPP
Trigger: GGGAGGGATGCCCAAGTGTCATAAGGACACCCCCTC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTCCGCGTTGCGCTCCTaGAAGGCTACCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPSALRS*KATFFL
Trigger: CAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGGGATTTGCTCCGATaGAGCGCGGTGAATCCCGGG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFWDLLR*SAVNPG
Trigger: CCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGATGTTCTCGCAGCTaGCTACGCTGCTGTGGATCT +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGCSRS*LRCCGS
Trigger: AGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTCTGCATGCCCAGCCTaGTCTCGGCATCCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILSACPA*SRHPSY
Trigger: GTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCAGAAGAGCAGTGTCTaGTTAGGAGCAGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVQKSSV*LGAAQA
Trigger: GGCTTGGGCTGCTCCTAAGCAGACACTGCTCTTCTG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCCAGGCATGATGGTGTaGACCTGTAGTACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPPGMMV*TCSTSN
Trigger: GTTGCTGGTACTACAGGTGCACACCATCATGCCTGG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCCCTTGCAGCTCTCCTaGACACCACCACGCACACTG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACPLQLS*TPPRTL
Trigger: CAGTGTGCGTGGTGGTGTGCAGGAGAGCTGCAAGGG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGCATAAACAAGTGCTaGCCGCTCAATGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGINKC*PLNGGR
Trigger: CCTCCCTCCATTGAGCGGGCAGCACTTGTTTATGCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGCCATCCTCACCCACTaGCTGTCTCCATGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWAILTH*LSPCPN
Trigger: ATTTGGGCATGGAGACAGGCAGTGGGTGAGGATGGC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCCCAATCCTGGGACTaGCGGAAGCTCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSQSWD*RKLQGF
Trigger: AAATCCCTGGAGCTTCCGGCAGTCCCAGGATTGGGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGGACGCACTTAAGCTaGCAATGCCCCAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILRTHLS*QCPNLG
Trigger: GCCCAGGTTGGGGCATTGGCAGCTTAAGTGCGTCCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGCGGCTACTGCGGCTaGCTGCTGTCTCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGGYCG*LLSPPR
Trigger: GCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCGCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAACCAGTGCCGTAGCTaGGGGAAGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPNQCRS*GKPSSS
Trigger: GGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCACTTGGACGGGACCCTaGGGCTCTGGGAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPTWTGP*GSGRDG
Trigger: CCCATCTCTCCCAGAGCCCCAGGGTCCCGTCCAAGT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTGGCCCGACTCCAGTaGCGGGGGCGGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTVARLQ*RGRAQA
Trigger: GGCTTGTGCCCGCCCCCGCCACTGGAGTCGGGCCAC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTTGGCTTTGGGCGTGTaGGCCTCGTCCACGCGGTGC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHLALGV*ASSTRC
Trigger: GCACCGCGTGGACGAGGCCCACACGCCCAAAGCCAA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGATGCAGGATGACCTaGGGCGCCCGGGTCGGCGTC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGCRMT*GARVGV
Trigger: GACGCCGACCCGGGCGCCCCAGGTCATCCTGCATCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGACACAGGCTTCCGATaGGGAAGCTACTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVDTGFR*GSYLRT
Trigger: GGTCCTCAAGTAGCTTCCCCATCGGAAGCCTGTGTC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGTCGCCGGCCCAGGTTaGGATCAAGAGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNVAGPG*DQEEGG
Trigger: CCCTCCCTCCTCTTGATCCCAACCTGGGCCGGCGAC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCCAGTTCCTCTCTCTaGCCCTCTAGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSSSSL*PSRREM
Trigger: CATCTCCCTCCTAGAGGGCCAGAGAGAGGAACTGGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTTCAGGAGGGCCCTTTaGGAAACACAGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPFRRAL*ETQGFP
Trigger: AGGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCAGGGTAGTAGACCCTaGCTGCCTCTTCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILQGSRP*LPLPFL
Trigger: GAGGAAGGGAAGAGGCAGCCAGGGTCTACTACCCTG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGGCTGGGTTTTCCCCTaGATCACTCAGGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFGWVFP*ITQALS
Trigger: GGACAGGGCCTGAGTGATCCAGGGGAAAACCCAGCC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGTAGGCCCCAGTGGGTaGTGGTTTGCTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFVGPSG*WFAAAV
Trigger: GACTGCTGCAGCAAACCACCACCCACTGGGGCCTAC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTAACAGAATGGGTATaGATTGCAGGGCCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVTEWV*IAGPRE
Trigger: TTCTCGAGGCCCTGCAATCCATACCCATTCTGTTAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGTGCTGCCCGCTCAATaGAGGGAGGGAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILVLPAQ*REGAFL
Trigger: AAGAAAGGCTCCCTCCCTCCATTGAGCGGGCAGCAC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGCAGGCTTGGCCTGTaGCCCACTATGGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPCRLGL*PTMAPR
Trigger: CCTAGGGGCCATAGTGGGCCACAGGCCAAGCCTGCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GCTGGGAGTGTTGGAAAGGCAATTCAGGAGGGCCCTTaGGGAAACACAGGGGTTTCCTGTAGCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGSVGKAIQEGP*GNTGVSCSQAP
Trigger: AGGAGCCTGGCTACAGGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAATTGCCTTTCCAACACTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TGCCTGTCACTCCCCTTGGAGTTCAAAGTGATTCCCTaGCAGGTGTGTGCAGGTGAGGGTGAGGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: CLSLPLEFKVIP*QVCAGEGEVVR
Trigger: CCGTACCACCTCACCCTCACCTGCACACACCTGCAAGGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTCCGATGCAGCGCGGTaGATCCCGGGATCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACSDAAR*IPGSSV
Trigger: TACACTTGATCCCGGGATTCACCGCGCTGCATCGGA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAAGTTGGCCTCAGTGTaGACAGGAGGGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACKLASV*TGGVEG
Trigger: GCCTTCCACCCCTCCTGTTCACACTGAGGCCAACTT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCAGACTGTGCACGTCTaGGACATCCAGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGQTVHV*DIQYLV
Trigger: CACCAAGTACTGGATGTCTCAGACGTGCACAGTCTG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCTGCTGGTTGGGTCTTaGAAGGCCATTCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFLLVGS*KAIPWR
Trigger: ACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAAAAGGGCTCAAGTCTaGGGTGCAGGGAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNKRAQV*GAGRPP
Trigger: CGGCGGCCTCCCTGCACCTCAGACTTGAGCCCTTTT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAAAAGGGCTCAAGTCTaGGGTGCAGGGAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHKRAQV*GAGRPP
Trigger: CGGCGGCCTCCCTGCACCTCAGACTTGAGCCCTTTT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCACCTGTGTGCAGCTGTaGTGGGACAAGGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILTCVQL*WDKGKH
Trigger: GTGTTTGCCCTTGTCCCATCACAGCTGCACACAGGT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTCGCTGCTGAGTCAGTaGCTTATGTGTACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGSLLSQ*LMCTGH
Trigger: GTGCCCTGTACACATAAGTCACTGACTCAGCAGCGA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTCGCTGCTGAGTCAGTaGCTTATGTGTACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWSLLSQ*LMCTGH
Trigger: GTGCCCTGTACACATAAGTCACTGACTCAGCAGCGA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGAAGCCCATGTATATaGCGGTTTGCTAAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGSPCI*RFAKSK
Trigger: CTTGCTTTTAGCAAACCGTCATATACATGGGCTTCC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCATTCAGGGGTCAAGTaGCAGTCCGCTACAGACAAG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGHSGVK*QSATDK
Trigger: CTTGTCTGTAGCGGACTGTCACTTGACCCCTGAATG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGTAGTAAGTGCTCTGTaGATGAGGGCTGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPVVSAL*MRAVQG
Trigger: ACCCTGAACAGCCCTCATTCACAGAGCACTTACTAC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTATGGGGCTGGGGACATaGGCCTTTGAAATACAAGCA +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPMGLGT*AFEIQA
Trigger: TGCTTGTATTTCAAAGGCTCATGTCCCCAGCCCCAT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAAGGTCTCCACATCTaGGCCAGGGCACCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQGLHI*ARAPSV
Trigger: AACAGAGGGTGCCCTGGCTCAGATGTGGAGACCTTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAATGTTCTGTTTCTATaGGGGCCTTGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWNVLFL*GPWWGG
Trigger: CCCACCCCACCAAGGCCCTCATAGAAACAGAACATT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGTCTCCTCCCCGCGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIVSSPR*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCGCGGGGAGGAGAC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGGGATTTGCTCCGATaGAGCGCGGTGAATCCCGGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPWDLLR*SAVNPG
Trigger: CCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTCGTGGAGGAGGGGTTaGTGCTGGAGTCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPSWRRG*CWSLAG
Trigger: ACCAGCCAGACTCCAGCAGCAACCCCTCCTCCACGA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTTCGAGGTCACCGGATaGAGGATGACCTGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHFEVTG*RMTWGA
Trigger: GGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTTCTCCTCTCCCATCTaGATGCCCAGCCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACFSSPI*MPSLLS
Trigger: CGAGAGCAGGCTGGGCATGCAGATGGGAGAGGAGAA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGATCATGCTAGGCCTTaGCAAAGGCTGTGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVDHARP*QRLWLD
Trigger: GTCCAACCACAGCCTTTGGCAAGGCCTAGCATGATC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGATCATGCTAGGCCTTaGCAAAGGCTGTGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWDHARP*QRLWLD
Trigger: GTCCAACCACAGCCTTTGGCAAGGCCTAGCATGATC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAGGACAGAGGTTCACTaGGGCTCCACATTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHRTEVH*GSTFQD
Trigger: GTCCTGGAATGTGGAGCCGCAGTGAACCTCTGTCCT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCCAGGCATGATGGTGTaGACCTGTAGTACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVPGMMV*TCSTSN
Trigger: GTTGCTGGTACTACAGGTGCACACCATCATGCCTGG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAACACGGGACCACAGTaGAACATCCAGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWNTGPQ*NIQQER
Trigger: TCTCTCCTGCTGGATGTTGCACTGTGGTCCCGTGTT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCACTTAAGCTGCCAATaGCCCAACCTGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACHLSCQ*PNLGRA
Trigger: AGCCCTGCCCAGGTTGGGGCATTGGCAGCTTAAGTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAGACTCCAAATTGGATaGCATCTTGGAAGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGRLQIG*HLGSGV
Trigger: GACTCCACTTCCAAGATGGCATCCAATTTGGAGTCT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCATGAAGGGACAAGGTTaGTCCACGCTGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILMKGQG*STLGSA
Trigger: AGCAGAGCCCAGCGTGGAGCAACCTTGTCCCTTCAT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCACTTCAGGCTGTATTaGAGGCTTGGCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACHFRLY*RLGLWP
Trigger: GGGCCACAGGCCAAGCCTGCAATACAGCCTGAAGTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATACTTGGACGGGACCCTaGGGCTCTGGGAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNTWTGP*GSGRDG
Trigger: CCCATCTCTCCCAGAGCCCCAGGGTCCCGTCCAAGT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCAGGGGCCCCGGGAGTaGGGCTGGTGTGACAATAGT +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNQGPRE*GWCDNS
Trigger: ACTATTGTCACACCAGCCCCACTCCCGGGGCCCCTG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTGCCTACGCTGCTGTaGATCTTGAGGTTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLPTLL*ILRFKG
Trigger: ACCCTTGAACCTCAAGATCCACAGCAGCGTAGGCAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCCATGCCAGCGGCCGTaGTACACTTGCCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHPCQRP*YTCPKR
Trigger: CCGCTTTGGGCAAGTGTACCACGGCCGCTGGCATGG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGTGTCGGGGGACAGCTaGCGGATGATCTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHVSGDS*RMISGA
Trigger: GGCACCAGAGATCATCCGCCAGCTGTCCCCCGACAC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGGCCATTCCCTGGCGTaGAGTTCATACCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWGHSLA*SSYQIV
Trigger: CACAATCTGGTATGAACTCCACGCCAGGGAATGGCC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGGGCTGTGGCCGCCCTaGGCTTCCTGTTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIGLWPP*ASCSLP
Trigger: GGGCAGTGAACAGGAAGCCCAGGGCGGCCACAGCCC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTCCAGTTCCTCTCTCTaGCCCTCTAGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILSSSSL*PSRREM
Trigger: CATCTCCCTCCTAGAGGGCCAGAGAGAGGAACTGGA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGTTTGGAAGCAGGTTTaGCCCCCAGAGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGVWKQV*PPEHEP
Trigger: TGGTTCATGCTCTGGGGGCCAAACCTGCTTCCAAAC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCCATTCTTCCCGGTTTaGAAGCAGGTTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILPFFPV*KQVWPP
Trigger: TGGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCACTCAGTAGGCTGCTaGGCAGAGCCAAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFHSVGC*AEPRQV
Trigger: CACCTGTCTTGGCTCTGCCCAGCAGCCTACTGAGTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGCTGTAGGTGGGGATaGGAATGGTGGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWSCRWG*EWWKVR
Trigger: TCTCACCTTCCACCATTCCCATCCCCACCTACAGCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTTGGCAGGCTGGGTATaGCCTATGGGGCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACLAGWV*PMGHSL
Trigger: CAGGCTATGCCCCATAGGCCATACCCAGCCTGCCAA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAACCATTTGGCAGGCTaGGTATGGCCTATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWNHLAG*VWPMGH
Trigger: ATGCCCCATAGGCCATACCCAGCCTGCCAAATGGTT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACATGTAAAAACCATTTaGCAGGCTGGGTATGGCCTA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGHVKTI*QAGYGL
Trigger: TAGGCCATACCCAGCCTGCCAAATGGTTTTTACATG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACTTCTGGCATCCAGATaGGTGAGAGATGATACATCT +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLLASR*VRDDTS
Trigger: AGATGTATCATCTCTCACCCATCTGGATGCCAGAAG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGGCCACCTGACTCAATaGGTCGCTTCATACGTCACA +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGGHLTQ*VASYVT
Trigger: TGTGACGTATGAAGCGACCCATTGAGTCAGGTGGCC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCTGGAGGTGGGTTCCTaGGAATGGATGAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILLEVGS*EWMSPK
Trigger: CTTTGGGCTCATCCATTCCCAGGAACCCACCTCCAG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGATGAACCCCTTGACCTaGAGGTGGGTTCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWMNPLT*RWVPGN
Trigger: ATTCCCAGGAACCCACCTCCAGGTCAAGGGGTTCAT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGAACCACTGTCCACATaGATGGAATCGGGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPEPLST*MESGSK
Trigger: CTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTATAGCTTCCCTCTCTaGGCCTCAGATCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPYSFPL*ASDPAS
Trigger: AGAAGCAGGATCTGAGGCCCAGAGAGGGAAGCTATA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATTCTTAGAAGGGCTGTaGAAGGATGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGFLEGL*KDGEND
Trigger: GTCATTCTCTCCATCCTTCCACAGCCCTTCTAAGAA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGCCAATGCCCCAACCTaGGCAGGGCTGTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNANAPT*AGLCWG
Trigger: TCCCCAACACAGCCCTGCCCAGGTTGGGGCATTGGC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGCCAATGCCCCAACCTaGGCAGGGCTGTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHANAPT*AGLCWG
Trigger: TCCCCAACACAGCCCTGCCCAGGTTGGGGCATTGGC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAATTGGATGCCATCTTaGAAGTGGAGTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGNWMPS*KWSQRS
Trigger: GCTTCTCTGACTCCACTTCCAAGATGGCATCCAATT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGGAGGGTCTTTCTCTaGGTTGGGAGCTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFWRVFL*VGSSCG
Trigger: CCCACAGGAGCTCCCAACCCAGAGAAAGACCCTCCA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAGAGCAGGCCTGAGGTaGCCTGAGTACTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFRAGLR*PEYWSD
Trigger: GTCAGACCAGTACTCAGGCCACCTCAGGCCTGCTCT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCTAGAGGTGGGATTCTaGGGGAGGTTCATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVLEVGF*GRFIWV
Trigger: CACCCAAATGAACCTCCCCCAGAATCCCACCTCTAG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGGTGGGGTGGGGGCTaGTCTTGCCAGAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPWWGGG*SCQRLS
Trigger: AGAGAGTCTCTGGCAAGACCAGCCCCCACCCCACCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TCAAGGTCTCCACATCTGAGCCAGGGCACCCTCTGTTaGGAGATGGAGACTCCAGGGTCCCAAAATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRSPHLSQGTLC*EMETPGSQNQA
Trigger: AGCCTGATTTTGGGACCCTGGAGTCTCCATCTCCAAACAGAGGGTGCCCTGGCTCAGATGTGGAGACCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GATAGGGAGGAAGAATGTTCTGTTTCTATGAGGGCCTaGGTGGGGTGGGGGCTGGTCTTGCCAGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: DREEECSVSMRA*VGWGLVLPETL
Trigger: GAGAGTCTCTGGCAAGACCAGCCCCCACCCCACCAAGGCCCTCATAGAAACAGAACATTCTTCCTCCCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTGGAAAACCTGTGCTTaGTGGAGTTGCCGAGATCTC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVWKTCA*WSCRDL
Trigger: GAGATCTCGGCAACTCCATCAAGCACAGGTTTTCCA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTGGATGATCAGAAGATaGCAGGGTGGGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGWMIRR*QGGASL
Trigger: CAAAGAAGCCCCACCCTGTCATCTTCTGATCATCCA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCTCGAAGTCATCCTCTaGCTCTTCGGCCTCATCATG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILLEVIL*LFGLIM
Trigger: CATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCTGCTGGTTGGGTCTTaGAAGGCCATTCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLLVGS*KAIPWR
Trigger: ACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAGGAGGTGCGGGCAGTaGGGTGAAAAGGGATGCTAC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPRRCGQ*GEKGCY
Trigger: GTAGCATCCCTTTTCACCTCACTGCCCGCACCTCCT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAGGACTCCTCAAGGGTaGCAGGCAGGGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWRTPQG*QAGKSF
Trigger: AAAAGATTTCCCTGCCTGTCACCCTTGAGGAGTCCT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGATGGGGAAGCTACTTaGGGACCCCGCACCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTDGEAT*GPRTRL
Trigger: TAGCCTGGTGCGGGGTCCTCAAGTAGCTTCCCCATC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGGCTCCTGGGAAGCATaGCTGATCTCACCATTCTTC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHGSWEA*LISPFF
Trigger: GAAGAATGGTGAGATCAGTCATGCTTCCCAGGAGCC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGTGATGGAAGAGAAGTaGGTGGTTGGGTTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGVMEEK*VVGFQA
Trigger: TGCCTGAAACCCAACCACTCACTTCTCTTCCATCAC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGCCAAGGCTTCCTGGTaGATCTTCACCCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACAKASW*IFTLWT
Trigger: AGTCCACAGGGTGAAGATTCACCAGGAAGCCTTGGC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTTCGGGACTCAAGATTaGGAACCAGTGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVFGTQD*EPVWGK
Trigger: CTTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCCTTGGAGTTCAAAGTaGTTCCCTTGCAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGPWSSK*FPCRCV
Trigger: CACACACCTGCAAGGGAATCACTTTGAACTCCAAGG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGATCATAGTCAGGCACTaGCCAGAGAGGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGIIVRH*PERTEV
Trigger: AACCTCTGTCCTCTCTGGTCAGTGCCTGACTATGAT...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGATTGTAACATCCCCATaGGCAGCTGGACATGAACCC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVIVTSP*AAGHEP
Trigger: GGGTTCATGTCCAGCTGCTCATGGGGATGTTACAAT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGTGAAAGGAGAAGAGTaGGATAAGGGAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGVKGEE*DKGGSL
Trigger: GAGTGACCCTCCCTTATCTCACTCTTCTCCTTTCAC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCTTGTGGGGAGAGTTaGGGAAGCTGCTTAACATCC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSCGES*GSCLTS
Trigger: GGATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGCACAGATGTAATGTaGCTTGCCTTATCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGTDVM*LALSAP
Trigger: TGGGGCAGATAAGGCAAGTCACATTACATCTGTGCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGTCCACGGTTTGGAGTaGTTTAGCGCGTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHVHGLE*FSAFSR
Trigger: CCTTGAGAACGCGCTAAAGCACTCCAAACCGTGGAC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGCCTCGTCCACGCGGTaGCCCAGCTGGAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTASSTR*PSWNSW
Trigger: CCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTCTTCTGCTGCCGTGTaGACTGTGGGGAAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSSAAV*TVGKGV
Trigger: TACACCCTTCCCCACAGTGCACACGGCAGCAGAAGA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATGGTCTGGCTGGCCTTaGGTGGGAAGCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEWSGWP*VGSSGP
Trigger: CGGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCCAAAGGCACCACGTaGAGCCTGCAGTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPKGTT*SLQCSH
Trigger: ATGAGAGCACTGCAGGCTGCACGTGGTGCCTTTGGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTATCCTGCTATTGCTCTaGTTGGGGACAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPILLLL*LGTDFP
Trigger: AGGGAAATCTGTCCCCAAGCAGAGCAATAGCAGGAT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGATCCTGGCCTGGCTaGAGCAGAGACCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGSWPG*SRDQCR
Trigger: CCTGCATTGGTCTCTGCTGCAGCCAGGCCAGGATCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCAAGCAGTCAACATCTaGTCCACCCTATCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGQAVNI*STLSKD
Trigger: GTCCTTGGATAGGGTGGAGCAGATGTTGACTGCTTG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAGAGGGCAGCTGTCTaGAAGCCAAAGAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQRAAV*KPKKEA
Trigger: GGCCTCTTTCTTTGGCTTGCAGACAGCTGCCCTCTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGAGATACTGGGGATGTaGAGTCACAGAGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHEILGM*SHRGKA
Trigger: GGCCTTTCCTCTGTGACTGCACATCCCCAGTATCTC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCTGGGCCTCAGATCCTaGTTCTGTGAAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVLGLRS*FCERRR
Trigger: TCTTCTCCTTTCACAGAAGCAGGATCTGAGGCCCAG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGTTGGCATAAACAAGTaGTGCCCGCTCAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILVGINK*CPLNGG
Trigger: CCCTCCATTGAGCGGGCAGCACTTGTTTATGCCAAC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGCCATCCTCACCCACTaGCTGTCTCCATGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFAILTH*LSPCPN
Trigger: ATTTGGGCATGGAGACAGGCAGTGGGTGAGGATGGC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAGGACGCACTTAAGCTaGCAATGCCCCAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPRTHLS*QCPNLG
Trigger: GCCCAGGTTGGGGCATTGGCAGCTTAAGTGCGTCCT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGTGGGGGCTGGTCTTaGCAGAGACTCTCTCACATC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGGGWS*QRLSHI
Trigger: GATGTGAGAGAGTCTCTGGCAAGACCAGCCCCCACC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCGTGGGCCACTGGATaGTCCAGTCTTGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSWATG*SSLVWK
Trigger: TTTCCAAACAAGACTGGACCATCCAGTGGCCCACGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAACGCGGTGCCCCAGCTaGAACTCGTGGGATTTGCTC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTTRCPS*NSWDLL
Trigger: GAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGT...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTTGAAGGCCTTGAGCTaGTCCTCGTTGTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILLKALS*SSLSLS
Trigger: TGAGAGGGACAACGAGGACCAGCTCAAGGCCTTCAA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGAGTGCCCCGTCATTaGGACAGTCTGGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGVPRH*DSLALA
Trigger: AGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTCTTGGCTTTCCAAATaGCAAGGAGGTGCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILSWLSK*QGGAGS
Trigger: ACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAACCCGCATCCACCTTaGTGGGGGAATAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHNPHPP*WGNKLH
Trigger: GTGAAGCTTATTCCCCCACCAAGGTGGATGCGGGTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGAGCATGAACCAGTCTaGGAGTCACCCAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPEHEPV*ESPKVG
Trigger: CCCCACCTTGGGTGACTCCCAGACTGGTTCATGCTC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGAGAGACCAATGCAGGTaGGGACAGAGTAGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVRDQCR*GQSSEV
Trigger: CACTTCACTACTCTGTCCCCACCTGCATTGGTCTCT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGAAGAGGAGGAGATACTaGGGATGTGCAGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVKRRRY*GCAVTE
Trigger: CTCTGTGACTGCACATCCCCAGTATCTCCTCCTCTT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGGCTTGGGGATATGGTaGCACAGTGGAACAAGACCA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILGLGIW*HSGTRP
Trigger: TGGTCTTGTTCCACTGTGCCACCATATCCCCAAGCC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCATGGCACCCACAACATaGTCTGGCAAAGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILMAPTT*SGKGES
Trigger: GGATTCCCCTTTGCCAGACCATGTTGTGGGTGCCAT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGCTGGGTCTGCAATTTaGAGGCTGGTTTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHAGSAI*RLVSVP
Trigger: AGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGTGGGTTCCTGGGAATaGATGAGCCCAAAGACTCGT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILVGSWE*MSPKTR
Trigger: ACGAGTCTTTGGGCTCATCCATTCCCAGGAACCCAC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCAGATGTACATTTCCTaGAAATCCGGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVQMYIS*KSGLLL
Trigger: CAGCAGCAGCCCGGATTTCCAGGAAATGTACATCTG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGAACCACTGTCCACATaGATGGAATCGGGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWEPLST*MESGSK
Trigger: CTTAGAGCCCGATTCCATCCATGTGGACAGTGGTTC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTATTTCCTTTCTCCCATaGAAGGTTGCAGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPISFLP*KVADGR
Trigger: CCTGCCATCTGCAACCTTCCATGGGAGAAAGGAAAT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGGCCCTTCACTATCTaGGAGACTTTCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILRPFTI*ETFLPG
Trigger: CCCAGGAAGGAAAGTCTCCCAGATAGTGAAGGGCCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTCAGTCACACGGGACTaGACAGAACTGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGSVTRD*TELPHL
Trigger: AAGATGTGGCAGTTCTGTCCAGTCCCGTGTGACTGA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTACCCTTCCCAATCCTaGGACTGCCGGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPYPSQS*DCRKLQ
Trigger: CTGGAGCTTCCGGCAGTCCCAGGATTGGGAAGGGTA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCAGGGGGCCTCGGTGTaGCAGGGCAAGTACCTTAGA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHQGASV*QGKYLR
Trigger: TCTAAGGTACTTGCCCTGCCACACCGAGGCCCCCTG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGAACCAGAGCATGCTaGGGAAAGAAGTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGTRAC*GKKSRS
Trigger: AGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTTAAGTCTGTCGAGTaGATCCTGGTACAAGATCAA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVKSVE*ILVQDQ
Trigger: TTGATCTTGTACCAGGATCCACTCGACAGACTTAAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGACCCTCCATCCATCTaGCCTTTCTTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHDPPSI*PFFPGW
Trigger: CCATCCAGGAAAGAAAGGCCAGATGGATGGAGGGTC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CCTGAGCTCCGTGTCTACTACTTCCTCCGTGTACCTTaGATGATCAGCTGTAGGTGGGGATGGGAATGGTGG +
Preference number: 4 (lower is better)
Translates to: PELRVYYFLRVP*MISCRWGWEWW
Trigger: CCACCATTCCCATCCCCACCTACAGCTGATCATCAAAGGTACACGGAGGAAGTAGTAGACACGGAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CTTCCCAATCCTGGGACTGCCGGAAGCTCCAGGGATTaGATTCTAGGGGTAAAACAGCTGGACCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LPNPGTAGSSRD*ILGVKQLDLQR
Trigger: CCTCTGTAGGTCCAGCTGTTTTACCCCTAGAATCAAATCCCTGGAGCTTCCGGCAGTCCCAGGATTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGCGGGGAGCGCTGCTaGGAGGGGATGTTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLESGERC*EGMFSQ
Trigger: CTGCGAGAACATCCCCTCTCAGCAGCGCTCCCCGCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTCCGTAGAGGGTTGTTaGTGTCACACGGAACGGACT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACSVEGC*CHTERT
Trigger: AGTCCGTTCCGTGTGACATCAACAACCCTCTACGGA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGGGGAGCGTCTGACTaGTGTGCAGGTCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPWGASD*CAGLNS
Trigger: GCTATTCAGACCTGCACATCAGTCAGACGCTCCCCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTGATGATGGCCAGGTaGGGCGGGCTCATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVMMAR*GGLMQA
Trigger: TGCCTGCATGAGCCCGCCTCACCTGGCCATCATCAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGGGACAGCTGGCGGATaGTCTCTGGTGCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEGTAGG*SLVPGG
Trigger: GCCACCTGGCACCAGAGATCATCCGCCAGCTGTCCC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTCCCCTGGGCCGCACTaGTCAATAACGCATCACCCT +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNSPGPH*SITHHP
Trigger: AGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGTCAAGGGCTTCTATTaGCTGACAATCCAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWVKGFY*LTIQGS
Trigger: GCTACCTTGGATTGTCAGTCAATAGAAGCCCTTGAC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGCCCTGCTAACACTTTaGTTTTGGACTTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVALLTL*FWTSGI
Trigger: GATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATCTGTAAACATTTCTTaGGCACTTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSVNIS*ALTMCQ
Trigger: CTGGCACATAGTAAGTGCTCAAGAAATGTTTACAGA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGTAGTACCAGCAACTTaGGAGGCTAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACVVPAT*EAKVGG
Trigger: TCCTCCCACCTTAGCCTCTCAAGTTGCTGGTACTAC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGTGAAAGGAGAAGAGTaGGATAAGGGAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHVKGEE*DKGGSL
Trigger: GAGTGACCCTCCCTTATCTCACTCTTCTCCTTTCAC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCAGATCCTGCTTCTGTaGAAGGAGAAGAGTGAGATA +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPQILLL*KEKSEI
Trigger: TATCTCACTCTTCTCCTTTCACAGAAGCAGGATCTG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGAAGTTTCTGAGGCCTaGGTTCTAAACCTACCTCTG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWEVSEA*VLNLPL
Trigger: CAGAGGTAGGTTTAGAACTCAGGCCTCAGAAACTTC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCACGCTGGGCTCTGCTaGGGGTGTAGTGAATGGGGC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFHAGLC*GCSEWG
Trigger: GCCCCATTCACTACACCCTCAGCAGAGCCCAGCGTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGCTGTTCCTTCTGTCTaGCACACCGTTCCCTACCAT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACAVPSV*HTVPYH
Trigger: ATGGTAGGGAACGGTGTGTCAGACAGAAGGAACAGC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAAAGAGAGCGAGAAATaGGAGGCTTGGGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHKESEK*EAWGGN
Trigger: GTTTCCACCCCAAGCCTCTCATTTCTCGCTCTCTTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCCTCATCCATCGCTTaGTCTGCAACCCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTSSSIA*SATPFP
Trigger: GGGGAAGGGGGTTGCAGAGCAAGCGATGGATGAGGA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGCAAACTCAGAGGCTaGTGCTCCTCGCTTTTCGTC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFCKLRG*CSSLFV
Trigger: GACGAAAAGCGAGGAGCAGCAGCCTCTGAGTTTGCA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTGGACCAGTTCGCACTaGTGTAAGGCTTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPWTSSH*CKAFCK
Trigger: TTTGCAAAAAGCCTTACAGCAGTGCGAACTGGTCCA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGATGTTCTCGCAGCTaGCTACGCTGCTGTGGATCT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGCSRS*LRCCGS
Trigger: AGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCGCCGATCTCCAGCTaGTCAAAGGGGATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTSPISS*SKGMSH
Trigger: GTGGGACATCCCCTTTGAGCAGCTGGAGATCGGCGA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGTTTGTCCTCCCGCCTaGCAGCCTGCAGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEVCPPA*QPAAPQ
Trigger: CTGGGGTGCTGCAGGCTGGCAGGCGGGAGGACAAAC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGCAAAGACGTCAGAGTaGTTGGAGAAGGGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILAKTSE*LEKGSL
Trigger: TAAGCTCCCCTTCTCCAAGCACTCTGACGTCTTTGC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGTTCATACCAGATTGTaGCAAGGGCAAAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVVHTRL*QGQRRQ
Trigger: CTGACGTCTTTGCCCTTGGCACAATCTGGTATGAAC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCCAGATTATTGCCTCTaGTGGTTGGGTCTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGPDYCL*WLGLER
Trigger: CCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGATGCCTGTGCCCATTTaGCAGATTATTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWMPVPI*QIIASA
Trigger: AGCAGAGGCAATAATCTGGCAAATGGGCACAGGCAT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTACTTCAGAGCTCTATaGAAAGGTGCCACACGCCAT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWYFRAL*KGATRH
Trigger: ATGGCGTGTGGCACCTTTGCATAGAGCTCTGAAGTA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGTGGACATTTCAGCTaGAGGGTAGTAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFCGHFS*RVVDPG
Trigger: GCCAGGGTCTACTACCCTGCAGCTGAAATGTCCACA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTACAGGGCACCTGTGTaGAGCTGTGATGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPYRAPV*SCDGTR
Trigger: CCTTGTCCCATCACAGCTGCACACAGGTGCCCTGTA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCACCCAGACTGACATTTaGTGCCTGTCACTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACTQTDI*CLSLPL
Trigger: CAAGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTGGATTAGTGATGTCTaGCAAGAGTACAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGWISDV*QEYSRG
Trigger: TCCCCTGCTGTACTCTTGGCAGACATCACTAATCCA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGCCCCAGTCAACTTCTaGTTTGGGATAGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACAPVNF*FGIGRK
Trigger: CTTCCTCCCTATCCCAAAGCAGAAGTTGACTGGGGC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTGGTCCAGTCTTGTTTaGAAAGGTTGCCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVWSSLV*KGCLLT
Trigger: TGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATTGGCTTTGGGCGTGTaGGCCTCGTCCACGCGGTGC +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELALGV*ASSTRC
Trigger: GCACCGCGTGGACGAGGCCCACACGCCCAAAGCCAA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGTTTGCTCTTCTTCTTaGCTTTGGGCGTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACVCSSS*LWACGP
Trigger: AGGCCCACACGCCCAAAGCCAAGAAGAAGAGCAAAC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGTTTGCTCTTCTTCTTaGCTTTGGGCGTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFVCSSS*LWACGP
Trigger: AGGCCCACACGCCCAAAGCCAAGAAGAAGAGCAAAC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTGTCGGGGGACAGCTaGCGGATGATCTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVSGDS*RMISGA
Trigger: GGCACCAGAGATCATCCGCCAGCTGTCCCCCGACAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAATAACGCATCACCCTaGCTGGTCCGGTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFNNASP*LVRFSP
Trigger: AGGACTGAACCGGACCAGCCAGGGTGATGCGTTATT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGGGCTTCCCCAACATaGTCAGGAAGAGTCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGASPT*SGRVAG
Trigger: GCCGGCGACTCTTCCTGACCATGTTGGGGAAGCCCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTTCAGGAGGGCCCTTTaGGAAACACAGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFFRRAL*ETQGFP
Trigger: AGGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTAGTCCCAGTAAGCTaGGAGTGTTGGAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLVPVS*ECWKGN
Trigger: ATTGCCTTTCCAACACTCCCAGCTTACTGGGACTAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGGTGCCAGTTCTTGTaGACATTTCAGCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILRCQFL*TFQLQG
Trigger: ACCCTGCAGCTGAAATGTCCACAAGAACTGGCACCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAAGAGGAGGAGATACTaGGGATGTGCAGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHKRRRY*GCAVTE
Trigger: CTCTGTGACTGCACATCCCCAGTATCTCCTCCTCTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCATCTTCAAGGGCACCTaGGTTCTACAGTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFIFKGT*VLQWRT
Trigger: GGTCCTCCACTGTAGAACCCAGGTGCCCTTGAAGAT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGCTGGGTCTGCAATTTaGAGGCTGGTTTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFAGSAI*RLVSVP
Trigger: AGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAATCCGGGCTGCTGCTaGCAGCCTGTCAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPNPGCC*QPVSLR
Trigger: TCTCAAACTGACAGGCTGCCAGCAGCAGCCCGGATT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCATGATCCCAATGAGTaGGAAGGAAGGGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACHDPNE*EGRALS
Trigger: GGAAAGGGCCCTTCCTTCCCACTCATTGGGATCATG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTGGTGTTCTTGTTCATaGAACCACTGTCCACATGGA +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPWCSCS*NHCPHG
Trigger: TCCATGTGGACAGTGGTTCCATGAACAAGAACACCA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACCTAGTCGCGTGGCCTaGAGACAACTCAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTPSRVA*RQLRGH
Trigger: ATGTCCCCTGAGTTGTCTCCAGGCCACGCGACTAGG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTATGGAAGGTTGCAGATaGCAGGATGCTGGATTTGAA +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPMEGCR*QDAGFE
Trigger: TTCAAATCCAGCATCCTGCCATCTGCAACCTTCCAT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAGGCCCTTCACTATCTaGGAGACTTTCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACRPFTI*ETFLPG
Trigger: CCCAGGAAGGAAAGTCTCCCAGATAGTGAAGGGCCT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAATAAGCAGAGGAAAATaGCTAGAATCTTACAGGACC +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGISRGK*LESYRT
Trigger: GGTCCTGTAAGATTCTAGCCATTTTCCTCTGCTTAT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTGTAGTGAATGGGGCTaGGGACATGAGCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWCSEWG*GHEPLK
Trigger: TTTCAAAGGCTCATGTCCCCAGCCCCATTCACTACA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGGAACCAGAGCATGCTaGGGAAAGAAGTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILGTRAC*GKKSRS
Trigger: AGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGGATCTTCTCTGCCTaGTCCAGGTATGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGIFSA*SRYGQG
Trigger: CCCTTGACCATACCTGGACCAGGCAGAGAAGATCCC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGACCATCGGTCCGCGTTaGTCTGTACAAGAATTAGTC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVTIGPR*SVQELV
Trigger: GACTAATTCTTGTACAGACCAACGCGGACCGATGGT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGATGGAGAAAAGAATATaGACCATCGGTCCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVMEKRI*TIGPRW
Trigger: CCAACGCGGACCGATGGTCCATATTCTTTTCTCCAT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGACCCTCCATCCATCTaGCCTTTCTTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFDPPSI*PFFPGW
Trigger: CCATCCAGGAAAGAAAGGCCAGATGGATGGAGGGTC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TACCACATACAGACAGAACTGAGGAGTGCCCCGTCATaGGGACAGTCTGGCTCTTGCTTGTCAAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: YHIQTELRSAPS*GQSGSCLSRGN
Trigger: GTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GACTGGTCCCCTCGGGAAGCCCATGTATATGACGGTTaGCTAAAAGCAAGACTGACTGGAACAACTCGCTGC +
Preference number: 4 (lower is better)
Translates to: DWSPREAHVYDG*LKARLTGTTRC
Trigger: GCAGCGAGTTGTTCCAGTCAGTCTTGCTTTTAGCAAACCGTCATATACATGGGCTTCCCGAGGGGACCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GATGAGGATAGGGAGGGCATATTTCGGGACTCAAGATaGAGAACCAGTGTGGGGAAAGAAAGCCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: DEDREGIFRDSR*RTSVGKESRGW
Trigger: CCATCCCCGGCTTTCTTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAAATATGCCCTCCCTATCCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTaGGAGTTCAAAGTGATTCCCTTGCAGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RTQTDICCLSLP*EFKVIPLQVCA
Trigger: TGCACACACCTGCAAGGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CCAGTACCAGGTGCTACTGGTATCTTGTGGGGAGAGTaGAGGAAGCTGCTTAACATCCTCCAATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PVPGATGILWGE*RKLLNILQCPG
Trigger: TCCTGGGCATTGGAGGATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGATACCAGTAGCACCTGGTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGACCAGCGTGGCACTaGCAGTGTGTTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGPAWH*QCVCRE
Trigger: TTCTCTGCAAACACACTGTCAGTGCCACGCTGGTCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATACTGATGTGCAGGTCTaGATAGCGAGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHTDVQV*IARWLP
Trigger: CGGAAGCCACCTCGCTATTCAGACCTGCACATCAGT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTCACCGGATGCAGGATaGCCTGGGGCGCCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSPDAG*PGAPGS
Trigger: CGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCACCGGATGCAGGATaGCCTGGGGCGCCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSPDAG*PGAPGS
Trigger: CGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGCGGCCCTTTCCAATaGGCTCGCCGATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFSGPFQ*ARRSPA
Trigger: AGCTGGAGATCGGCGAGCTCATTGGAAAGGGCCGCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACCTGGGAAGCATGACTaGTCTCACCATTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTPGKHD*SHHSSR
Trigger: CCGGGAAGAATGGTGAGATCAGTCATGCTTCCCAGG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGAAGTCAAGAGCAAGTaGCTCAGATTCAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILEVKSK*LRFRDG
Trigger: TCCATCCCTGAATCTGAGTCACTTGCTCTTGACTTC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTGTCATTGTATAGAATaGGTTGCAGGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVCHCIE*VAGEAG
Trigger: ACCAGCCTCACCTGCAACTCATTCTATACAATGACA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAAGCCACTCAGTGTGTaGCATTTTGTTATTATGGCC +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPKPLSV*HFVIMA
Trigger: GGCCATAATAACAAAATGTCACACACTGAGTGGCTT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAGAAACCAACCCTGCTaGCACCTTGATCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFRNQPC*HLDLGT
Trigger: AGTCCCAAGATCAAGGTGTCAGCAGGGTTGGTTTCT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGTAGTAAGTGCTCTGTaGATGAGGGCTGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFVVSAL*MRAVQG
Trigger: ACCCTGAACAGCCCTCATTCACAGAGCACTTACTAC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGTTCCTGGGAATGGATaGGCCCAAAGACTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHVPGNG*AQRLVF
Trigger: AAAAACGAGTCTTTGGGCTCATCCATTCCCAGGAAC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTGTGGGCCAGTACATTaGCATTGCCTCCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACCGPVH*HCLLQY
Trigger: GTACTGAAGGAGGCAATGTCAATGTACTGGCCCACA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAACACACAGCAGATTTaGCCCCTCCATTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHNTQQI*PLHWKT
Trigger: TGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGCTTCTGGAAGTTTCTaGGGCCTGAGTTCTAAACCT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHASGSF*GLSSKP
Trigger: AGGTTTAGAACTCAGGCCTCAGAAACTTCCAGAAGC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTCTTGTGGGGAGAGTTaGGGAAGCTGCTTAACATCC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSCGES*GSCLTS
Trigger: GGATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGTGTTGGGGAGAGGTTaGCCCCATCTAGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIVLGRG*PHLGQS
Trigger: GCTCTGCCCTAGATGGGGTCAACCTCTCCCCAACAC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAGAAGTCTCCTCCTCTaGGAATCCTTCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPRSLLL*ESFLEG
Trigger: ACCCTCCAGGAAGGATTCTCAGAGGAGGAGACTTCT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTCCATCAACAGGACTaGTACATTCTTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLHQQD*YILSHT
Trigger: AGTGTGGGAAAGAATGTATCAGTCCTGTTGATGGAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTTGGGGTGGAAACGTTaGCCACCTAAGTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLGWKR*PPKSGI
Trigger: GATCCCAGACTTAGGTGGTCAACGTTTCCACCCCAA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTCTTCTGCTGCCGTGTaGACTGTGGGGAAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHSSAAV*TVGKGV
Trigger: TACACCCTTCCCCACAGTGCACACGGCAGCAGAAGA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTGGTCTGGCTGGCCTTaGGTGGGAAGCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHWSGWP*VGSSGP
Trigger: CGGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCAGAAGAGCAGTGTCTaGTTAGGAGCAGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHQKSSV*LGAAQA
Trigger: GGCTTGGGCTGCTCCTAAGCAGACACTGCTCTTCTG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGCAAGAGTGAGAAGGTaGCAGTTCTTGTGGACATTT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWARVRR*QFLWTF
Trigger: AAATGTCCACAAGAACTGGCACCTTCTCACTCTTGC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTTTCCATCAACCTCCTaGCCCACTACTGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGFPSTS*PTTGFK
Trigger: TTTGAAACCAGTAGTGGGGCAGGAGGTTGATGGAAA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTTTCCATCAACCTCCTaGCCCACTACTGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVFPSTS*PTTGFK
Trigger: TTTGAAACCAGTAGTGGGGCAGGAGGTTGATGGAAA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAATACCATCCAGCCCTaGCAATGGTGCCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFNTIQP*QWCPSN
Trigger: GTTAGAAGGGCACCATTGGCAGGGCTGGATGGTATT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGATCAGTGGGAAGGCATaGTGTGATGGATTAGTGATG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGISGKA*CDGLVM
Trigger: CATCACTAATCCATCACAGCATGCCTTCCCACTGAT...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCTGAGAAGAAACATCTaGAGAGCGCTGATAGACTGT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGLRRNI*RALIDC
Trigger: ACAGTCTATCAGCGCTCTGCAGATGTTTCTTCTCAG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTATTTGTGGTTGACTTaGTTCTTGTCTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPYLWLT*FLSLFP
Trigger: GGGGAAGAGAGACAAGAAGCAAGTCAACCACAAATA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCCAGGCAAAGATTTATaGATCACACAGTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWPGKDL*ITQLGR
Trigger: TCTGCCCAACTGTGTGATGCATAAATCTTTGCCTGG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATATGAAGGGACAAGGTTaGTCCACGCTGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHMKGQG*STLGSA
Trigger: AGCAGAGCCCAGCGTGGAGCAACCTTGTCCCTTCAT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCAAGCCTCGCTAATTTaGAGTAGCCACATATACCCT +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVQASLI*SSHIYP
Trigger: AGGGTATATGTGGCTACTGCAAATTAGCGAGGCTTG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGAAGCACCTACTGTGTaGCAGGTATTGCGTAACGTT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILEAPTV*QVLRNV
Trigger: AACGTTACGCAATACCTGGCACACAGTAGGTGCTTC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGTCTGGGATCTTCTCTaGCTGGTCCAGGTATGGTCA +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPVWDLL*LVQVWS
Trigger: TGACCATACCTGGACCAGGCAGAGAAGATCCCAGAC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCAGGGGCCCCGGGAGTaGGGCTGGTGTGACAATAGT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHQGPRE*GWCDNS
Trigger: ACTATTGTCACACCAGCCCCACTCCCGGGGCCCCTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATTGGTGCATTTGTTGTaGCACTTTAACTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLVHLL*HFNLQF
Trigger: AAACTGCAAGTTAAAGTGCCACAACAAATGCACCAA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGATGCAGGATGACCTaGGGCGCCCGGGTCGGCGTC +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGCRMT*GARVGV
Trigger: GACGCCGACCCGGGCGCCCCAGGTCATCCTGCATCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGATTTCCTTCCAAGATTaGATTCGAGGTCACCGGATG +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGISFQD*IRGHRM
Trigger: CATCCGGTGACCTCGAATCCAATCTTGGAAGGAAAT...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCATCCAAAACGATTTTaGCATCCCTCACAACGGAAT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPHPKRF*HPSQRN
Trigger: ATTCCGTTGTGAGGGATGCCAAAATCGTTTTGGATG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTGTGTAGGATTCCCTTaGCGTGGAGGTAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNCVGFP*RGGSPC
Trigger: GCATGGGCTACCTCCACGCCAAGGGAATCCTACACA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAATCTCTGGTGCCAGGTaGCATAGCCAGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTISGAR*HSQPFW
Trigger: CCAGAATGGCTGGCTATGCCACCTGGCACCAGAGAT...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCCCAGATGGTACAGCTaGAACCTACCACATACAGAC +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACPRWYS*NLPHTD
Trigger: GTCTGTATGTGGTAGGTTCCAGCTGTACCATCTGGG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCACATAACCCAACATaGACGTACCCCAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPHNPT*TYPKNP
Trigger: CGGGTTCTTGGGGTACGTCCATGTTGGGTTATGTGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAACACAGAGGGGCTGTaGCCGCCCTGGGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHNTEGL*PPWASC
Trigger: ACAGGAAGCCCAGGGCGGCCACAGCCCCTCTGTGTT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGTTTGGAAGCAGGTTTaGCCCCCAGAGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPVWKQV*PPEHEP
Trigger: TGGTTCATGCTCTGGGGGCCAAACCTGCTTCCAAAC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCTAGTCCCAGTAAGCTaGGAGTGTTGGAAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILLVPVS*ECWKGN
Trigger: ATTGCCTTTCCAACACTCCCAGCTTACTGGGACTAG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCACAGAGTGTTGTGTTaGGATGGGGAGGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFHRVLC*DGEVSI
Trigger: AATGGACACCTCCCCATCCCAACACAACACTCTGTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGTATCCTGGAAGAGTTaGGTGAAATTTATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGVSWKS*VKFMCK
Trigger: TTTGCACATAAATTTCACCCAACTCTTCCAGGATAC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTCTCAAGATAATGATTaGCCTGAGCTCCGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVSQDND*PELRVY
Trigger: GTAGACACGGAGCTCAGGCCAATCATTATCTTGAGA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCATGTAAAAACCATTTaGCAGGCTGGGTATGGCCTA +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGHVKTI*QAGYGL
Trigger: TAGGCCATACCCAGCCTGCCAAATGGTTTTTACATG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGAAACTGGTAACAGAATaGGTATGGATTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGKLVTE*VWIAGP
Trigger: AGGCCCTGCAATCCATACCCATTCTGTTACCAGTTT...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGAGGGCTGTTCAGGGTaGATTGTTACTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPEGCSG*IVTLPP
Trigger: AGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAATCCGGGCTGCTGCTaGCAGCCTGTCAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNNPGCC*QPVSLR
Trigger: TCTCAAACTGACAGGCTGCCAGCAGCAGCCCGGATT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATCTATGGGACATGCTTaGGAAACAAGGTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSMGHA*ETRSYL
Trigger: TAAATAAGACCTTGTTTCCCAAGCATGTCCCATAGA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGAGGTTGAGAAACCCTaGCTTAGAATGAACATCTCT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPEVEKP*LRMNIS
Trigger: AGAGATGTTCATTCTAAGCCAGGGTTTCTCAACCTC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAAGTCAGGGTGTGTCTaGGGATGTTTTTGGATGTCA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWKSGCV*GCFWMS
Trigger: TGACATCCAAAAACATCCCCAGACACACCCTGACTT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACAGGGGGCCTCGGTGTaGCAGGGCAAGTACCTTAGA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIQGASV*QGKYLR
Trigger: TCTAAGGTACTTGCCCTGCCACACCGAGGCCCCCTG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTGTAGTGAATGGGGCTaGGGACATGAGCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILCSEWG*GHEPLK
Trigger: TTTCAAAGGCTCATGTCCCCAGCCCCATTCACTACA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCACATCCTTCACTGTGTaGAGGCAGGCAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPTSFTV*RQAETE
Trigger: CTCTGTCTCTGCCTGCCTCCACACAGTGAAGGATGT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATGCAGGCTTGGCCTGTaGCCCACTATGGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKECRLGL*PTMAPR
Trigger: CCTAGGGGCCATAGTGGGCCACAGGCCAAGCCTGCA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTATACCCTGGGAGTCTaGCGGTCAGCAAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACYTLGV*RSAKML
Trigger: AAGCATCTTTGCTGACCGCCAGACTCCCAGGGTATA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGGATCTTCTCTGCCTaGTCCAGGTATGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGIFSA*SRYGQG
Trigger: CCCTTGACCATACCTGGACCAGGCAGAGAAGATCCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTGTCGAGTGGATCCTaGTACAAGATCAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLSSGS*YKIKSQ
Trigger: TTGAGACTTGATCTTGTACCAGGATCCACTCGACAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAAACAACAGGCTTGCTaGCTCAGAGGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILKQQAC*LRGTQT
Trigger: AGTTTGTGTGCCTCTGAGCCAGCAAGCCTGTTGTTT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAAACAACAGGCTTGCTaGCTCAGAGGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHKQQAC*LRGTQT
Trigger: AGTTTGTGTGCCTCTGAGCCAGCAAGCCTGTTGTTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCAGAAGCAAACCAGGTaGTGTGATGCTGTCTGTACA +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACQKQTR*CDAVCT
Trigger: TGTACAGACAGCATCACATCACCTGGTTTGCTTCTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTAGGAGAGGGAGGCGTTaGGGCGGGCACACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPRRGRR*GGHTPP
Trigger: GGGAGGAGTGTGCCCGCCTCAACGCCTCCCTCTCCT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGAAAGGTTGCCTCCTaGCATGTGGACATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGKVAS*HVDIPE
Trigger: CTCAGGAATGTCCACATGTCAGGAGGCAACCTTTCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGTTTTGGGGAGCGTCTaGCTGATGTGCAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHVLGSV*LMCRSE
Trigger: TTCAGACCTGCACATCAGTCAGACGCTCCCCAAAAC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCTCGAAGTCATCCTCTaGCTCTTCGGCCTCATCATG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLEVIL*LFGLIM
Trigger: CATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAGACGTTCTTTGACTTaGGGTCCTTGTGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILRRSLT*GPCVGF
Trigger: GAATCCTACACAAGGACCTCAAGTCAAAGAACGTCT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGGGACAGCTGGCGGATaGTCTCTGGTGCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHGTAGG*SLVPGG
Trigger: GCCACCTGGCACCAGAGATCATCCGCCAGCTGTCCC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATACATACAGACAGAACTaGGGAGTGCCCCGTCATTGG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHTYRQN*GVPRHW
Trigger: CCAATGACGGGGCACTCCTCAGTTCTGTCTGTATGT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGATGGGGAAGCTACTTaGGGACCCCGCACCAGGCTA +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHDGEAT*GPRTRL
Trigger: TAGCCTGGTGCGGGGTCCTCAAGTAGCTTCCCCATC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGCCAAACTGGTGCTCATaGATGAATGGAAAAATCAGC +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGPNWCS*MNGKIS
Trigger: GCTGATTTTTCCATTCATTCATGAGCACCAGTTTGG...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAATGGATCTAAGCAATaGCTTTGGGTTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWNGSKQ*LWVSSL
Trigger: CAAGCTGGAAACCCAAAGTCATTGCTTAGATCCATT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAGGGGATGGATGGGTaGAGTGAAGGTAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQGMDG*SEGRHR
Trigger: CCTGTGCCTACCTTCACTTCACCCATCCATCCCCTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGGCAGGGATTGGACTaGCACAGCTGCAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGQGLD*HSCKPR
Trigger: CCTTGGCTTGCAGCTGTGTCAGTCCAATCCCTGCCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCTTTGGATAGGGTCATaGGGCACATTCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLWIGS*GTFRGQ
Trigger: TTGACCCCTGAATGTGCCTCATGACCCTATCCAAAG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAAACTCATTGGGGTTaGTATGGCACCCACAACATG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQTHWG*YGTHNM
Trigger: CATGTTGTGGGTGCCATATCAACCCCAATGAGTTTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGCCCTTTCCCACCCCTaGGAGGGAAGAGCACTCACT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEALSHP*EGRALT
Trigger: AGTGAGTGCTCTTCCCTCTCAGGGGTGGGAAAGGGC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTCCAAGTTCCCTAACTaGGAAGAAACATCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHSKFPN*EETSAE
Trigger: CTCTGCAGATGTTTCTTCTCAGTTAGGGAACTTGGA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGGCCCCCATATGCCGTaGCTTCCAGCCCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTGPHMP*LPAQLL
Trigger: TAACAGCTGGGCTGGAAGTCACGGCATATGGGGGCC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCCCAGAAGCCCAGACTaGACAGCAGAAATTTTACAA +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHPRSPD*TAEILQ
Trigger: TTGTAAAATTTCTGCTGTTCAGTCTGGGCTTCTGGG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGTATTTATTTCCTCCTaGTATCCTGGTACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGVFISS*YPGTSL
Trigger: AAGGCTGGTACCAGGATATCAGGAGGAAATAAATAC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGTATTTATTTCCTCCTaGTATCCTGGTACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWVFISS*YPGTSL
Trigger: AAGGCTGGTACCAGGATATCAGGAGGAAATAAATAC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAAATCACCCACTGAATaGATGGTTGGTGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPKSPTE*MVGEEI
Trigger: GATTTCTTCACCAACCATTCATTCAGTGGGTGATTT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTCAACTGGAGGCTTTTaGAATCCACCAACATACCCA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILSTGGF*NPPTYP
Trigger: TGGGTATGTTGGTGGATTTCAAAAGCCTCCAGTTGA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCATGGGGCTGGGGACATaGGCCTTTGAAATACAAGCA +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPMGLGT*AFEIQA
Trigger: TGCTTGTATTTCAAAGGCTCATGTCCCCAGCCCCAT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTGGGGTGGAAACGTTaGCCACCTAAGTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLGWKR*PPKSGI
Trigger: GATCCCAGACTTAGGTGGTCAACGTTTCCACCCCAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACACGATTCGGAACCAGTaGCGTAGCTGGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHTIRNQ*RSWGKP
Trigger: CGGCTTCCCCCAGCTACGGCACTGGTTCCGAATCGT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCCTCCAGGACCTCCTTaGGCACATCGACGATTCGGA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFPPGPP*AHRRFG
Trigger: TCCGAATCGTCGATGTGCGCAAGGAGGTCCTGGAGG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGCCTCGTCCACGCGGTaGCCCAGCTGGAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPASSTR*PSWNSW
Trigger: CCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAGGTTGAAGTTCTTCTaGTGCCGTGTGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNRLKFF*CRVHCG
Trigger: CCCACAGTGCACACGGCAGCAGAAGAACTTCAACCT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATCGCCGATCTCCAGCTaGTCAAAGGGGATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFISPISS*SKGMSH
Trigger: GTGGGACATCCCCTTTGAGCAGCTGGAGATCGGCGA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGCCAGCCATTCTGGATaGGCAGTTTGTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEASHSG*AVCPPA
Trigger: GGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGGCTCAAGTCTGAGGTaGAGGGAGGCCGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHGSSLR*REAAEQ
Trigger: CTGCTCGGCGGCCTCCCTGCACCTCAGACTTGAGCC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAGGCACTCAGTAGGCTaGTGGGCAGAGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIRHSVG*WAEPRQ
Trigger: CTGTCTTGGCTCTGCCCAGCAGCCTACTGAGTGCCT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAGAATGGGTATGGATTaGAGGGCCTCGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHRMGMD*RASRRE
Trigger: CTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAACACGGGACCACAGTaGAACATCCAGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHNTGPQ*NIQQER
Trigger: TCTCTCCTGCTGGATGTTGCACTGTGGTCCCGTGTT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCTAAGCATTTCCAATaGATGCTTGTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPKHFQ*MLVPGP
Trigger: GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCTGAGAAGAAACATCTaGAGAGCGCTGATAGACTGT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILLRRNI*RALIDC
Trigger: ACAGTCTATCAGCGCTCTGCAGATGTTTCTTCTCAG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCTTAAGGCCCCCATATaGCGTGACTTCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLKAPI*RDFQPS
Trigger: GCTGGGCTGGAAGTCACGGCATATGGGGGCCTTAAG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTCAGGCTCCTTTTCCTaGCCTTTATATGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPSGSFS*PLYAAP
Trigger: GGGTGCTGCATATAAAGGGCAGGAAAAGGAGCCTGA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCTCAGCAAGAGGATCTaGTTCTTAGAAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLSKRI*FLEGLW
Trigger: CCACAGCCCTTCTAAGAAGCAGATCCTCTTGCTGAG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGGACTGGACAGAACTaGCACATCTTGTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGTGQN*HILSRL
Trigger: CAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGGGCAGGGTGTGCAGTaGTCCCTAGAAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTGQGVQ*SLEGWL
Trigger: TAGCCAGCCTTCTAGGGAGCACTGCACACCCTGCCC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGGCAGGGTGTGCAGTaGTCCCTAGAAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGQGVQ*SLEGWL
Trigger: TAGCCAGCCTTCTAGGGAGCACTGCACACCCTGCCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAAGAAACAACAGGCTTaGTGGCTCAGAGGCACACAA +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFKKQQA*WLRGTQ
Trigger: TTGTGTGCCTCTGAGCCAGCAAGCCTGTTGTTTCTT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACACGCGGTGCCCCAGCTaGAACTCGTGGGATTTGCTC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHTRCPS*NSWDLL
Trigger: GAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGGAGGGGTTGCTGCTaGAGTCTGGCTGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFRRGCC*SLAGKG
Trigger: TCCCTTACCAGCCAGACTCCAGCAGCAACCCCTCCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGATGCTGGTCTGGCTaGCCTTGCGTGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTRCWSG*PCVGSS
Trigger: GGAGCTTCCCACGCAAGGCCAGCCAGACCAGCATCT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTTGAAGGCCTTGAGCTaGTCCTCGTTGTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHLKALS*SSLSLS
Trigger: TGAGAGGGACAACGAGGACCAGCTCAAGGCCTTCAA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTTTCCCATGCCAATCTaGCTGAGGTTGGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACFPMPI*LRLGFM
Trigger: CATGAAACCCAACCTCAGCCAGATTGGCATGGGAAA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCTGATGCTGAGTCTCTaGCCTCCTGAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLMLSL*PPELAE
Trigger: CTCTGCCAGCTCAGGAGGCCAGAGACTCAGCATCAG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAGGTCGGTCGGGGTTaGTACCCTCTGATGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQVGRG*YPLMLS
Trigger: ACTCAGCATCAGAGGGTACCAACCCCGACCGACCTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTCTTGGCTTTCCAAATaGCAAGGAGGTGCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNSWLSK*QGGAGS
Trigger: ACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGTGCTCATGAATGAATaGAAAAATCAGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPVLMNE*KNQLLE
Trigger: CTCCAACAGCTGATTTTTCCATTCATTCATGAGCAC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATATGGCACCCACAACATaGTCTGGCAAAGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHMAPTT*SGKGES
Trigger: GGATTCCCCTTTGCCAGACCATGTTGTGGGTGCCAT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCATAGGAATTCCAGCCTaGCACGTAGTAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFIGIPA*HVVSAL
Trigger: CAGAGCACTTACTACGTGCCAGGCTGGAATTCCTAT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCATAAGTCTCAGAGGCTaGGATTGTAACATCCCCATG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILISLRG*DCNIPM
Trigger: CATGGGGATGTTACAATCCCAGCCTCTGAGACTTAT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACACCATCAGCCAGATGTaGTGTTCTTGTTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHTISQM*CSCSWN
Trigger: GTTCCATGAACAAGAACACCACATCTGGCTGATGGT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAAATGGCTTGGCTTCTaGAAGTTTCTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACKWLGF*KFLRPE
Trigger: CTCAGGCCTCAGAAACTTCCAGAAGCCAAGCCATTT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCGGGCAGAAGTTGGATaGGGGATAAGTGAAGACGAG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHRAEVG*GISEDE
Trigger: CTCGTCTTCACTTATCCCCCATCCAACTTCTGCCCG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCGGGCAGAAGTTGGATaGGGGATAAGTGAAGACGAG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNRAEVG*GISEDE
Trigger: CTCGTCTTCACTTATCCCCCATCCAACTTCTGCCCG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTGCTGCCCGCTCAATaGAGGGAGGGAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVLPAQ*REGAFL
Trigger: AAGAAAGGCTCCCTCCCTCCATTGAGCGGGCAGCAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTCAGAAAAGGCCTCTaGTTATTGTTGGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLRKGL*LLLACI
Trigger: AATACAGGCCAACAATAACCAGAGGCCTTTTCTGAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGTCTCTCTTCCCCATTaGGCTTTAGGCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFVSLPH*ALGFRT
Trigger: TGTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGAC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAAGTCAGGGTGTGTCTaGGGATGTTTTTGGATGTCA +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILKSGCV*GCFWMS
Trigger: TGACATCCAAAAACATCCCCAGACACACCCTGACTT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAATTGGATGCCATCTTaGAAGTGGAGTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHNWMPS*KWSQRS
Trigger: GCTTCTCTGACTCCACTTCCAAGATGGCATCCAATT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AGGAGTGCCCCGTCATTGGGACAGTCTGGCTCTTGCTaGTCAAGGGGAAACAAGAGTGAACAACGTCAAACA +
Preference number: 4 (lower is better)
Translates to: RSAPSLGQSGSC*SRGNKSEQRQT
Trigger: TGTTTGACGTTGTTCACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AAAGAGGCCTCACCAGAAACCAACCCTGCTGACACCTaGATCTTGGGACTTCCAGCCTCAAGAATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KEASPETNPADT*ILGLPASRIVR
Trigger: CCTCACAATTCTTGAGGCTGGAAGTCCCAAGATCAAGGTGTCAGCAGGGTTGGTTTCTGGTGAGGCCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGGGATGCTGGCAGGTTaGAGTTCTTCTGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTGMLAG*SSSAAV
Trigger: CACGGCAGCAGAAGAACTTCAACCTGCCAGCATCCC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCCCTTCACAATTTCTTaGGCAATCTGCCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACPFTIS*AICLVL
Trigger: CAAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCCATGCCAATCTGGCTaGGGTTGGGTTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFPCQSG*GWVSCL
Trigger: CAGGCATGAAACCCAACCTCAGCCAGATTGGCATGG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTCCCCTGGGCCGCACTaGTCAATAACGCATCACCCT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLESPGPH*SITHHP
Trigger: AGGGTGATGCGTTATTGATCAGTGCGGCCCAGGGGA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAAGGGGAAACAAGAGTaGACAACGTCAAACACACAG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFKGKQE*TTSNTQ
Trigger: CTGTGTGTTTGACGTTGTTCACTCTTGTTTCCCCTT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGGAACACACACAGGTaGGGGACACAGGCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGNTHR*GTQASD
Trigger: ATCGGAAGCCTGTGTCCCTCACCTGTGTGTGTTCCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCATGACAGCAACAGCCTaGCCTTGTAGACCAGGAATT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPMTATA*PCRPGI
Trigger: AATTCCTGGTCTACAAGGTCAGGCTGTTGCTGTCAT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGCTGTTGGAATTCAGTaGTGGGACGTGTTGATTGGG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHAVGIQ*WDVLIG
Trigger: CCCAATCAACACGTCCCATCACTGAATTCCAACAGC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATATCATAGTCAGGCACTaGCCAGAGAGGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHIIVRH*PERTEV
Trigger: AACCTCTGTCCTCTCTGGTCAGTGCCTGACTATGAT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAACATCCTGGGCCACCTaGCTCAATGGGTCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFITSWAT*LNGSLH
Trigger: ATGAAGCGACCCATTGAGTCAGGTGGCCCAGGATGT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCTCAACCCCATGAGATaGATCCTTCATATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLNPMR*ILHILG
Trigger: ACCAAGAATATGAAGGATTCATCTCATGGGGTTGAG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTGTGGGCCAGTACATTaGCATTGCCTCCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHCGPVH*HCLLQY
Trigger: GTACTGAAGGAGGCAATGTCAATGTACTGGCCCACA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTGGGAAGGCATGCTGTaGTGGATTAGTGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNWEGML*WISDVC
Trigger: GCAGACATCACTAATCCATCACAGCATGCCTTCCCA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGAAGTTTCTGAGGCCTaGGTTCTAAACCTACCTCTG +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPEVSEA*VLNLPL
Trigger: CAGAGGTAGGTTTAGAACTCAGGCCTCAGAAACTTC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAGTTGGGCAGAAGCCTaGCCAAGGACAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPSWAEA*PRTAPP
Trigger: GGGAGGGGCTGTCCTTGGTCAGGCTTCTGCCCAACT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGCACAGATGTAATGTaGCTTGCCTTATCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGTDVM*LALSAP
Trigger: TGGGGCAGATAAGGCAAGTCACATTACATCTGTGCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAAAAGAGAGCGAGAAATaGGAGGCTTGGGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTKESEK*EAWGGN
Trigger: GTTTCCACCCCAAGCCTCTCATTTCTCGCTCTCTTT...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAATCCATCGCTTGCTCTaGAACCCCCTTCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTIHRLL*NPLPLL
Trigger: GAGGAGGGGAAGGGGGTTGCAGAGCAAGCGATGGAT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCGTCCAGCTCCGCGTTaGGCTCCTGCAAGGCTACCT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPRPAPR*APARLP
Trigger: AGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCTTTCCCACAGACTGTaGACGTCTGAGACATCCAGT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHLSHRL*TSETSS
Trigger: ACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATGGAGGAGGGGTTGCTaGTGGAGTCTGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTWRRGC*WSLAGK
Trigger: CTTACCAGCCAGACTCCAGCAGCAACCCCTCCTCCA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTGAAGTTCTTCTGCTaGCGTGTGCACTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLKFFC*RVHCGE
Trigger: TTCCCCACAGTGCACACGGCAGCAGAAGAACTTCAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGTTTGTCCTCCCGCCTaGCAGCCTGCAGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPVCPPA*QPAAPQ
Trigger: CTGGGGTGCTGCAGGCTGGCAGGCGGGAGGACAAAC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACCCAAAGGCACCACGTaGAGCCTGCAGTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEPKGTT*SLQCSH
Trigger: ATGAGAGCACTGCAGGCTGCACGTGGTGCCTTTGGG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTTCTCCTCTCCCATCTaGATGCCCAGCCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEFSSPI*MPSLLS
Trigger: CGAGAGCAGGCTGGGCATGCAGATGGGAGAGGAGAA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAGGCACTCAGTAGGCTaGTGGGCAGAGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKERHSVG*WAEPRQ
Trigger: CTGTCTTGGCTCTGCCCAGCAGCCTACTGAGTGCCT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGTAGTAGACCCTGGCTaGCTCTTCCCTTCCTCATAT +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTVVDPG*LFPSSY
Trigger: ATATGAGGAAGGGAAGAGGCAGCCAGGGTCTACTAC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGTAGTAGACCCTGGCTaGCTCTTCCCTTCCTCATAT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHVVDPG*LFPSSY
Trigger: ATATGAGGAAGGGAAGAGGCAGCCAGGGTCTACTAC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGATGTGCAAATCCACATaGCCTTTAAAGAAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVMCKST*PLKKAE
Trigger: CTCAGCTTTCTTTAAAGGGCATGTGGATTTGCACAT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCAAGCAGTCAACATCTaGTCCACCCTATCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHQAVNI*STLSKD
Trigger: GTCCTTGGATAGGGTGGAGCAGATGTTGACTGCTTG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCCTTCTAACTCCCTGTaGCAGGGTCTTACTCTTACC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHPSNSL*QGLTLT
Trigger: GGTAAGAGTAAGACCCTGGCACAGGGAGTTAGAAGG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTCCCTGTACCACAGTTaGCCCATTGGAACGAGAATA +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPSLYHS*PIGTRI
Trigger: TATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGAAATCCGGGCTGCTaGTGGCAGCCTGTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGNPGC*WQPVSL
Trigger: CAAACTGACAGGCTGCCAGCAGCAGCCCGGATTTCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACTTAAGGCCCCCATATaGCGTGACTTCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELKAPI*RDFQPS
Trigger: GCTGGGCTGGAAGTCACGGCATATGGGGGCCTTAAG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTCAGGCTCCTTTTCCTaGCCTTTATATGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHSGSFS*PLYAAP
Trigger: GGGTGCTGCATATAAAGGGCAGGAAAAGGAGCCTGA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCAGACAAACCCAGAATaGCAGCATCTGTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNQTNPE*QHLCED
Trigger: GTCCTCACACAGATGCTGGCATTCTGGGTTTGTCTG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAGACTCCAAACTGGATaGCATATCAGAAGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPRLQTG*HIRSGG
Trigger: ACCCCCACTTCTGATATGGCATCCAGTTTGGAGTCT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCTCAGCAAGAGGATCTaGTTCTTAGAAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLSKRI*FLEGLW
Trigger: CCACAGCCCTTCTAAGAAGCAGATCCTCTTGCTGAG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCATGTTGTTGCTTCATTaGTACCAGAGACAGCCATTC +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILMLLLH*YQRQPF
Trigger: GAATGGCTGTCTCTGGTAGCAATGAAGCAACAACAT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGACTTCAGGACCCAATaGAGGGCACTAAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFDFRTQ*RALRNR
Trigger: TCTATTTCTTAGTGCCCTGCATTGGGTCCTGAAGTC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGGTGGGGGCTGGTCTTaGCAGAGACTCTCTCACATC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEGGGWS*QRLSHI
Trigger: GATGTGAGAGAGTCTCTGGCAAGACCAGCCCCCACC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTGCAGGGACACGGCATaGTCCACGGTTTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLECRDTA*STVWSA
Trigger: AGCACTCCAAACCGTGGACCATGCCGTGTCCCTGCA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAACCAGTGCCGTAGCTaGGGGAAGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPNQCRS*GKPSSS
Trigger: GGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTCCTCCAGGCTCAGCTaGCCGGGGGAGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHSSRLS*PGEISS
Trigger: GGAGGAAATCTCCCCCGGCCAGCTGAGCCTGGAGGA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCACACTCCTCCCGGTTaGCTCCGTATTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFHTPPG*LRISPQ
Trigger: CTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTCTTCGGCCTCATCATaGACCTCTTCATTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHSSASS*TSSFSD
Trigger: GTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACTGATGCTGAGTCTCTaGCCTCCTGAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELMLSL*PPELAE
Trigger: CTCTGCCAGCTCAGGAGGCCAGAGACTCAGCATCAG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCCTCAGAAGTCATCTTaGCTTTCCAAATGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACPQKSS*LSKWQG
Trigger: TCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCACAGAGTGTTGTGTTaGGATGGGGAGGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHHRVLC*DGEVSI
Trigger: AATGGACACCTCCCCATCCCAACACAACACTCTGTG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGACAGAGTAGTGAAGTaGGGAAAGATCGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACDRVVK*GKIEKS
Trigger: TGACTTCTCGATCTTTCCCCACTTCACTACTCTGTC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGATGAGGGCAGGGATTaGACTGACACAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIDEGRD*TDTAAS
Trigger: GCTTGCAGCTGTGTCAGTCCAATCCCTGCCCTCATC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACTGCAATTTGGAGGCTaGTTTCTGTCCCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTLQFGG*FLSLYH
Trigger: GTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCCTCTCTCTCTTTCCTaGTTCCAAGTTGCCAATAAG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFPLSLS*FQVANK
Trigger: CTTATTGGCAACTTGGAACCAGGAAAGAGAGAGAGG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGATATACTTTTCACATTaGCCTCCAAGCCATGGTATG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWIYFSH*PPSHGM
Trigger: CATACCATGGCTTGGAGGCCAATGTGAAAAGTATAT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGACCATCCCAATGACTTaGTTGAAGATGAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWTIPMT*LKMKTQ
Trigger: CTGAGTTTTCATCTTCAACCAAGTCATTGGGATGGT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAACTACAGCCCAAATaGCTTGGCTTCTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQLQPK*LGFWKF
Trigger: AAACTTCCAGAAGCCAAGCCATTTGGGCTGTAGTTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAAACCAAAGAGCAATTaGAGTCAGGCTCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHKPKSN*SQAPFP
Trigger: AGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCCTCAAAGAATTATCTaGCCCCAAATAGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILPQRII*PQIAQQ
Trigger: CTGTTGAGCTATTTGGGGCCAGATAATTCTTTGAGG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGGCAATGTCTGGAGATaGTTTTGGATGTCACACTTT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILGNVWR*FWMSHF
Trigger: AAAGTGTGACATCCAAAACCATCTCCAGACATTGCC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTACCCTTCCCAATCCTaGGACTGCCGGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHYPSQS*DCRKLQ
Trigger: CTGGAGCTTCCGGCAGTCCCAGGATTGGGAAGGGTA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAATTTTCCAAGATCTaGTCTTTTGCAGTGCCCGAC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQFSKI*SFAVPD
Trigger: GTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCCCAAAATCAGGCTTTaGGGAAAGCAGGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNPKIRL*GKQGKA
Trigger: TGCCTTTCCCTGCTTTCCCCAAAGCCTGATTTTGGG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGGTGGCCTGAGTACTaGTCTGACTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFRWPEY*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGTACTCAGGCCACCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAAATATCTAAATAAATaGGTAACACCCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPKYLNK*VTPTTS
Trigger: CGAGGTGGTGGGTGTTACCCATTTATTTAGATATTT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTGTCCTTATGACACTTaGGCATCCCTCCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHCPYDT*ASLPMF
Trigger: GAACATGGGGAGGGATGCCCAAGTGTCATAAGGACA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCCTTTCTTTCCTGGATaGCATCTGAATAGAGTGTTC +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHPFFPG*HLNRVF
Trigger: GAACACTCTATTCAGATGCCATCCAGGAAAGAAAGG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CCCCTTAGCAAACGAAGAGTTTTAAAGTCCAGGGAGTaGGTCCAGCCTTCAGGGCCTGAATTGCCTCCATAT +
Preference number: 4 (lower is better)
Translates to: PLSKRRVLKSRE*VQPSGPELPPY
Trigger: ATATGGAGGCAATTCAGGCCCTGAAGGCTGGACCAACTCCCTGGACTTTAAAACTCTTCGTTTGCTAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AGAAGCCACCAACACACAGCAGATTTGACCCCTCCATaGGAAGACACCATCAGCCAGATGTGGTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RSHQHTADLTPP*EDTISQMWCSC
Trigger: ACAAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTTGGTGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CCACATCTTGTCCAGACTGTCTATGTTGTTGCTTCATaGCTACCAGAGACAGCCATTCTAACCCGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PHLVQTVYVVAS*LPETAILTRPD
Trigger: GTCAGGCCGGGTTAGAATGGCTGTCTCTGGTAGCAATGAAGCAACAACATAGACAGTCTGGACAAGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CCCAATTCCCAAAGCAATTTTCCAAGATCTGGTCTTTaGCAGTGCCCGACTCGTCCTCTCTGTTACCCTTCC +
Preference number: 4 (lower is better)
Translates to: PNSQSNFPRSGL*QCPTRPLCYPS
Trigger: GGAAGGGTAACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTGCTTTGGGAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTGCAGTTTTTACACTTaGGGCCAAAAAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACCSFYT*GQKASL
Trigger: AAGGGATGCTTTTTGGCCTCAAGTGTAAAAACTGCA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACCTGGGAAGCATGACTaGTCTCACCATTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTPGKHD*SHHSSR
Trigger: CCGGGAAGAATGGTGAGATCAGTCATGCTTCCCAGG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTGGCACAAGGGAACATaGCAAGGACTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEWHKGT*QGLEPV
Trigger: CACAGGCTCCAGTCCTTGTCATGTTCCCTTGTGCCA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAACCTGTGTGCAGCTGTaGTGGGACAAGGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTTCVQL*WDKGKH
Trigger: GTGTTTGCCCTTGTCCCATCACAGCTGCACACAGGT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAGGGCTTCTATTGACTaGCAATCCAAGGTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHRASID*QSKVAV
Trigger: CACAGCTACCTTGGATTGTCAGTCAATAGAAGCCCT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGATTGTAAAAGTTTTTaGCTGTGTGGGCCACATCGT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFDCKSF*LCGPHR
Trigger: ACGATGTGGCCCACACAGTCAAAAACTTTTACAATC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGTGTTGGGGAGAGGTTaGCCCCATCTAGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPVLGRG*PHLGQS
Trigger: GCTCTGCCCTAGATGGGGTCAACCTCTCCCCAACAC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATACCTTAGAGTACCTTaGTGCCCATGCTGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTYLRVP*CPCCSY
Trigger: GTAGCTACAGCATGGGCATCAAGGTACTCTAAGGTA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAGAAGTCTCCTCCTCTaGGAATCCTTCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIRSLLL*ESFLEG
Trigger: ACCCTCCAGGAAGGATTCTCAGAGGAGGAGACTTCT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGCTGTTCCTTCTGTCTaGCACACCGTTCCCTACCAT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFAVPSV*HTVPYH
Trigger: ATGGTAGGGAACGGTGTGTCAGACAGAAGGAACAGC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCTGGGAGAGATGGGTaGGGATCCACGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSGRDG*GSTGWA
Trigger: AGCCCACCCCGTGGATCCGCACCCATCTCTCCCAGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCTCTGCGAGGGATCTaGGGGGACCAGCGTGGCACT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSLRGI*GDQRGT
Trigger: AGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAGTTGCCGAGATCTCTaGGAGGGATCTGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPSCRDL*EGSAGT
Trigger: GGTCCCCGCAGATCCCTCGCAGAGATCTCGGCAACT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTTCGAGGTCACCGGATaGAGGATGACCTGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPFEVTG*RMTWGA
Trigger: GGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCGGCCGTGGTACACTTaGCCAAAGCGGCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHRPWYT*PKRPFP
Trigger: TGGAAAGGGCCGCTTTGGGCAAGTGTACCACGGCCG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGTTCATACCAGATTGTaGCAAGGGCAAAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHVHTRL*QGQRRQ
Trigger: CTGACGTCTTTGCCCTTGGCACAATCTGGTATGAAC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACCAGATTATTGCCTCTaGTGGTTGGGTCTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTPDYCL*WLGLER
Trigger: CCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGACAGAACTGAGGAGTaGCCCGTCATTGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHDRTEE*PVIGTV
Trigger: GACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACAGACTGACATTTGCTaGCTGTCACTCCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIQTDIC*LSLPLE
Trigger: CTCCAAGGGGAGTGACAGGCAGCAAATGTCAGTCTG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTACCCAGACTGACATTTaGTGCCTGTCACTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFTQTDI*CLSLPL
Trigger: CAAGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGGACAGAGGTTCACTaGGGCTCCACATTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLERTEVH*GSTFQD
Trigger: GTCCTGGAATGTGGAGCCGCAGTGAACCTCTGTCCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCCTGGAAATCCGGGCTaGTGCTGGCAGCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHPGNPG*CWQPVS
Trigger: ACTGACAGGCTGCCAGCAGCAGCCCGGATTTCCAGG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTAGGAAATGGGAGCTaGATGATCCCAATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLGNGS*MIPMSG
Trigger: CCCACTCATTGGGATCATGCAGCTCCCATTTCCTAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTCATCTCTACAATTGTaGAACTTTCTCCTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPSSLQL*NFLLSL
Trigger: TAAACTGAGGAGAAAGTTGCACAATTGTAGAGATGA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGTTGGCATAAACAAGTaGTGCCCGCTCAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIVGINK*CPLNGG
Trigger: CCCTCCATTGAGCGGGCAGCACTTGTTTATGCCAAC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAAAAACCTATTTCCCTaGAATGTTCACTTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPKNLFP*NVHLRS
Trigger: ACTCCTTAAGTGAACATTGCAGGGAAATAGGTTTTT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATCCCAATCCTGGGACTaGCGGAAGCTCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSQSWD*RKLQGF
Trigger: AAATCCCTGGAGCTTCCGGCAGTCCCAGGATTGGGA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAGAGCCAGAGAGGGATaGAGAGCAGGCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPRAREG*RAGLRW
Trigger: CCACCTCAGGCCTGCTCTGCATCCCTCTCTGGCTCT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGCATGGTCCACGGTTTaGAGTGCTTTAGCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFAWSTV*SALARS
Trigger: AGAACGCGCTAAAGCACTCCAAACCGTGGACCATGC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAAGTCTATCATGTTTTaGACCAGTTCGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFKSIMF*TSSHCC
Trigger: ACAGCAGTGCGAACTGGTCCAAAACATGATAGACTT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCCTCCAGGCTCAGCTaGCCGGGGGAGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSSRLS*PGEISS
Trigger: GGAGGAAATCTCCCCCGGCCAGCTGAGCCTGGAGGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTCTGTCGTGGGCCACTaGATGGTCCAGTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFSVVGH*MVQSCL
Trigger: CAAACAAGACTGGACCATCCAGTGGCCCACGACAGA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACACCGGCACCACATCTaGGAAGATGAACTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIHRHHI*EDELLL
Trigger: AAGCAGCAGTTCATCTTCCCAGATGTGGTGCCGGTG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCACCGGCACCACATCTaGGAAGATGAACTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFHRHHI*EDELLL
Trigger: AAGCAGCAGTTCATCTTCCCAGATGTGGTGCCGGTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTTCATTCTCCGACGTTaGCTCCACTTCAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACFILRR*LHFNLK
Trigger: CTTCAAATTGAAGTGGAGCCAACGTCGGAGAATGAA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCATCCAAAACGATTTTaGCATCCCTCACAACGGAAT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFHPKRF*HPSQRN
Trigger: ATTCCGTTGTGAGGGATGCCAAAATCGTTTTGGATG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGTGTAGGATTCCCTTaGCGTGGAGGTAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHCVGFP*RGGSPC
Trigger: GCATGGGCTACCTCCACGCCAAGGGAATCCTACACA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAATCTCTGGTGCCAGGTaGCATAGCCAGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEISGAR*HSQPFW
Trigger: CCAGAATGGCTGGCTATGCCACCTGGCACCAGAGAT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGTCATTGGGACAGTCTaGCTCTTGCTTGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIVIGTV*LLLVKG
Trigger: CCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGAC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCCAGCAACCCCAGAGTaGCTGGGGCTCAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHPATPE*LGLRQT
Trigger: TGTTTGCCTGAGCCCCAGCCACTCTGGGGTTGCTGG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGTATCCTGGAAGAGTTaGGTGAAATTTATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: SACPACSRHPSYRYRTPGVSWKS*VKFMCK
Trigger: TTTGCACATAAATTTCACCCAACTCTTCCAGGATAC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGATGAGGGCAGGGATTaGACTGACACAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEDEGRD*TDTAAS
Trigger: GCTTGCAGCTGTGTCAGTCCAATCCCTGCCCTCATC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTCATTGGGGTTGATATaGCACCCACAACATGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHSLGLI*HPQHGL
Trigger: CAGACCATGTTGTGGGTGCCATATCAACCCCAATGA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTCATTGGGGTTGATATaGCACCCACAACATGGTCTG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNSLGLI*HPQHGL
Trigger: CAGACCATGTTGTGGGTGCCATATCAACCCCAATGA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCTCGTTTTTAAAATGCTaGGTCTGCAATTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TESISSSSVLSGRRTAILSFLKC*VCNLEA
Trigger: AGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGA...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCACCCACTGAATGAATaGTTGGTGAAGAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFHPLNE*LVKKSL
Trigger: CAGAGATTTCTTCACCAACCATTCATTCAGTGGGTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTTGGATGTCACACTTTaGATGTCAACTGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFLDVTL*MSTGGF
Trigger: AAAGCCTCCAGTTGACATCCAAAGTGTGACATCCAA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGAAATATCTAAATAAATaGGTAACACCCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWKYLNK*VTPTTS
Trigger: CGAGGTGGTGGGTGTTACCCATTTATTTAGATATTT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCCTTTCTTTCCTGGATaGCATCTGAATAGAGTGTTC +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFPFFPG*HLNRVF
Trigger: GAACACTCTATTCAGATGCCATCCAGGAAAGAAAGG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CTGGGCTTCCTGTTCACTGCCCAGATAATCCTGCTATaGCTCTGCTTGGGGACAGATTTCCCTTTTGTATCA +
Preference number: 4 (lower is better)
Translates to: LGFLFTAQIILL*LCLGTDFPFVS
Trigger: TGATACAAAAGGGAAATCTGTCCCCAAGCAGAGCAATAGCAGGATTATCTGGGCAGTGAACAGGAAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTaGCCCCATTGGAACGAGAATAAGACTACTGATCTC +
Preference number: 4 (lower is better)
Translates to: AIWRLVSVPVPQ*PHWNENKTTDL
Trigger: GAGATCAGTAGTCTTATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGACAGAAACCAGCCTCCAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTaGGAGGCTGGTTTCTGTCCCTGTACCACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: PKDSFLKCWVCN*EAGFCPCTTVA
Trigger: GGCAACTGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GTGGTCAGCTCTTTTCTGTGGGCCAGTACATTGACATaGCCTCCTTCAGTACCAGGTAAGGTATCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: VVSSFLWASTLT*PPSVPGKVSSL
Trigger: GAGACTTGATACCTTACCTGGTACTGAAGGAGGCAATGTCAATGTACTGGCCCACAGAAAAGAGCTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TCCATTGGAAGACACCATCAGCCAGATGTGGTGTTCTaGTTCATGGAACCACTGTCCACATGGATGGAATCG +
Preference number: 4 (lower is better)
Translates to: SIGRHHQPDVVF*FMEPLSTWMES
Trigger: CGATTCCATCCATGTGGACAGTGGTTCCATGAACAAGAACACCACATCTGGCTGATGGTGTCTTCCAATGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CCCCATTGGGCTTTAGGCTTCAGAACAGGTGAGACATaGTATCACTCATCACTGAATGCCCAGGGTCTAACA +
Preference number: 4 (lower is better)
Translates to: PHWALGFRTGET*YHSSLNAQGLT
Trigger: TGTTAGACCCTGGGCATTCAGTGATGAGTGATACAATGTCTCACCTGTTCTGAAGCCTAAAGCCCAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGAAAGGTTGCCTCCTaGCATGTGGACATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGKVAS*HVDIPE
Trigger: CTCAGGAATGTCCACATGTCAGGAGGCAACCTTTCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATAAGTTGGCCTCAGTGTaGACAGGAGGGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHKLASV*TGGVEG
Trigger: GCCTTCCACCCCTCCTGTTCACACTGAGGCCAACTT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGATCTCCTCGGTGGATaGTCAGAAGATGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTDLLGG*SEDDRV
Trigger: CACCCTGTCATCTTCTGATCATCCACCGAGGAGATC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGATCTCCTCGGTGGATaGTCAGAAGATGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHDLLGG*SEDDRV
Trigger: CACCCTGTCATCTTCTGATCATCCACCGAGGAGATC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATCCGTAGAGGGTTGTTaGTGTCACACGGAACGGACT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSVEGC*CHTERT
Trigger: AGTCCGTTCCGTGTGACATCAACAACCCTCTACGGA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTTTTGGGGAGCGTCTaGCTGATGTGCAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTVLGSV*LMCRSE
Trigger: TTCAGACCTGCACATCAGTCAGACGCTCCCCAAAAC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCCACATCTGGGAAGATaGACTGCTGCTTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNPHLGR*TAACIC
Trigger: ACAAATACAAGCAGCAGTTCATCTTCCCAGATGTGG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAGCGGCCCTTTCCAATaGGCTCGCCGATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSGPFQ*ARRSPA
Trigger: AGCTGGAGATCGGCGAGCTCATTGGAAAGGGCCGCT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAGACGTTCTTTGACTTaGGGTCCTTGTGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNRRSLT*GPCVGF
Trigger: GAATCCTACACAAGGACCTCAAGTCAAAGAACGTCT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTCGGGTTGGGGTGTCTaGAAACAGATATTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNSGWGV*KQIFPK
Trigger: CTTTGGAAATATCTGTTTTCAGACACCCCAACCCGA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGGGGGTCAGGGCTTTaGAAACATGGGCAAATGACC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTRGSGL*KHGQMT
Trigger: GGTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTTGGCCCCCAGAGCATaGACCAGTCTGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLAPRA*TSLGVT
Trigger: GGTGACTCCCAGACTGGTTCATGCTCTGGGGGCCAA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGGCTCCTGGGAAGCATaGCTGATCTCACCATTCTTC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTGSWEA*LISPFF
Trigger: GAAGAATGGTGAGATCAGTCATGCTTCCCAGGAGCC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGTGATGGAAGAGAAGTaGGTGGTTGGGTTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIVMEEK*VVGFQA
Trigger: TGCCTGAAACCCAACCACTCACTTCTCTTCCATCAC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCAGGGGATGGATGGGTaGAGTGAAGGTAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHQGMDG*SEGRHR
Trigger: CCTGTGCCTACCTTCACTTCACCCATCCATCCCCTG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGGCAGGGATTGGACTaGCACAGCTGCAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGQGLD*HSCKPR
Trigger: CCTTGGCTTGCAGCTGTGTCAGTCCAATCCCTGCCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACATTCAGGGGTCAAGTaGCAGTCCGCTACAGACAAG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEHSGVK*QSATDK
Trigger: CTTGTCTGTAGCGGACTGTCACTTGACCCCTGAATG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACTTTGGATAGGGTCATaGGGCACATTCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFILWIGS*GTFRGQ
Trigger: TTGACCCCTGAATGTGCCTCATGACCCTATCCAAAG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAATTGTAACATCCCCATaGGCAGCTGGACATGAACCC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIIVTSP*AAGHEP
Trigger: GGGTTCATGTCCAGCTGCTCATGGGGATGTTACAAT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGGCAGCCTGTCAGTTTaGGAACATAAGTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTGSLSV*EHKFKL
Trigger: AAGCTTGAACTTATGTTCTCAAACTGACAGGCTGCC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGCCCTTTCCCACCCCTaGGAGGGAAGAGCACTCACT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPALSHP*EGRALT
Trigger: AGTGAGTGCTCTTCCCTCTCAGGGGTGGGAAAGGGC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCAGATCCTGCTTCTGTaGAAGGAGAAGAGTGAGATA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHQILLL*KEKSEI
Trigger: TATCTCACTCTTCTCCTTTCACAGAAGCAGGATCTG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAACCCTGGCTTAGAATaGACATCTCTTTATCCTTCT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFNPGLE*TSLYPS
Trigger: AGAAGGATAAAGAGATGTTCATTCTAAGCCAGGGTT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACAGAAGGGCTTTCCCTaGGTAGCCTCAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEQKGFP*VASESN
Trigger: GTTGCTTTCTGAGGCTACTCAGGGAAAGCCCTTCTG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCAAGGTCTCCACATCTaGGCCAGGGCACCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHQGLHI*ARAPSV
Trigger: AACAGAGGGTGCCCTGGCTCAGATGTGGAGACCTTG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAATGTTCTGTTTCTATaGGGGCCTTGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKENVLFL*GPWWGG
Trigger: CCCACCCCACCAAGGCCCTCATAGAAACAGAACATT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCTGCTGCAATCGCTCCTaGCTCGCTCCACACCGACAT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPCCNRS*LAPHRH
Trigger: ATGTCGGTGTGGAGCGAGGCAGGAGCGATTGCAGCA...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCACGATTCGGAACCAGTaGCGTAGCTGGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSTIRNQ*RSWGKP
Trigger: CGGCTTCCCCCAGCTACGGCACTGGTTCCGAATCGT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCTTGTTTGGAAAGGTTaGCTCCTGACATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHLVWKG*LLTCGH
Trigger: ATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAGTTGCCGAGATCTCTaGGAGGGATCTGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSCRDL*EGSAGT
Trigger: GGTCCCCGCAGATCCCTCGCAGAGATCTCGGCAACT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTCGTGGAGGAGGGGTTaGTGCTGGAGTCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSWRRG*CWSLAG
Trigger: ACCAGCCAGACTCCAGCAGCAACCCCTCCTCCACGA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGGTTGAAGTTCTTCTaGTGCCGTGTGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTRLKFF*CRVHCG
Trigger: CCCACAGTGCACACGGCAGCAGAAGAACTTCAACCT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGCCAGCCATTCTGGATaGGCAGTTTGTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSASHSG*AVCPPA
Trigger: GGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGCAAGAGTGAGAAGGTaGCAGTTCTTGTGGACATTT +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTARVRR*QFLWTF
Trigger: AAATGTCCACAAGAACTGGCACCTTCTCACTCTTGC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGGATCCTGGCCTGGCTaGAGCAGAGACCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPGSWPG*SRDQCR
Trigger: CCTGCATTGGTCTCTGCTGCAGCCAGGCCAGGATCC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGAATGGGTATGGATTaGAGGGCCTCGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLERMGMD*RASRRE
Trigger: CTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACCTTCTAACTCCCTGTaGCAGGGTCTTACTCTTACC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIPSNSL*QGLTLT
Trigger: GGTAAGAGTAAGACCCTGGCACAGGGAGTTAGAAGG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGTGGATTGTTACTCTaGCTCCTAGACATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGGLLL*LLDILG
Trigger: GCCCAGGATGTCTAGGAGGCAGAGTAACAATCCACC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGGAAATCCGGGCTGCTaGTGGCAGCCTGTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPGNPGC*WQPVSL
Trigger: CAAACTGACAGGCTGCCAGCAGCAGCCCGGATTTCC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCCTGGAAATCCGGGCTaGTGCTGGCAGCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPPGNPG*CWQPVS
Trigger: ACTGACAGGCTGCCAGCAGCAGCCCGGATTTCCAGG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATATCAGTGGGAAGGCATaGTGTGATGGATTAGTGATG +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHISGKA*CDGLVM
Trigger: CATCACTAATCCATCACAGCATGCCTTCCCACTGAT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACTTAACATCCTCCAATaGCCAGGACAGTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELNILQ*PGQSPP
Trigger: AGGTGGCGACTGTCCTGGGCATTGGAGGATGTTAAG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGTCACCAGTACCAGGTaGTACTGGTATCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHVTSTR*YWYLVG
Trigger: CCCCACAAGATACCAGTAGCACCTGGTACTGGTGAC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGGACTGGACAGAACTaGCACATCTTGTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGTGQN*HILSRL
Trigger: CAGTCTGGACAAGATGTGGCAGTTCTGTCCAGTCCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTCTGGTCTTTTGCAGTaGCCGACTCGTCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLESGLLQ*PTRPLC
Trigger: ACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCAAGATCTGGTCTTTTaGAGTGCCCGACTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEQDLVF*SARLVL
Trigger: GAGGACGAGTCGGGCACTGCAAAAGACCAGATCTTG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCACTTAAGCTGCCAATaGCCCAACCTGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPHLSCQ*PNLGRA
Trigger: AGCCCTGCCCAGGTTGGGGCATTGGCAGCTTAAGTG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAGAGCCAGAGAGGGATaGAGAGCAGGCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSRAREG*RAGLRW
Trigger: CCACCTCAGGCCTGCTCTGCATCCCTCTCTGGCTCT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGCCCCAGTCAACTTCTaGTTTGGGATAGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEAPVNF*FGIGRK
Trigger: CTTCCTCCCTATCCCAAAGCAGAAGTTGACTGGGGC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTACATCAACTCACTCTaGAACAGTCGACACAAACAA +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFYINSL*NSRHKQ
Trigger: TTGTTTGTGTCGACTGTTGCAGAGTGAGTTGATGTA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCCCCGTCTCTGTCGTaGGCCACTGGATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSPSLS*ATGWSS
Trigger: ACTGGACCATCCAGTGGCCCACGACAGAGACGGGGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATACGCATCACCCTGGCTaGTCCGGTTCAGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHTHHPG*SGSVLA
Trigger: AGCTAGGACTGAACCGGACCAGCCAGGGTGATGCGT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACCACATAACCCAACATaGACGTACCCCAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTPHNPT*TYPKNP
Trigger: CGGGTTCTTGGGGTACGTCCATGTTGGGTTATGTGG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCCAGCAACCCCAGAGTaGCTGGGGCTCAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPPATPE*LGLRQT
Trigger: TGTTTGCCTGAGCCCCAGCCACTCTGGGGTTGCTGG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGGTGCCAGTTCTTGTaGACATTTCAGCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFRCQFL*TFQLQG
Trigger: ACCCTGCAGCTGAAATGTCCACAAGAACTGGCACCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCCTTGCCAAAGGCTGTaGTTGGACATTTTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFPCQRL*LDILVN
Trigger: ATTAACTAAAATGTCCAACCACAGCCTTTGGCAAGG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGGCTGGGTTTTCCCCTaGATCACTCAGGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPGWVFP*ITQALS
Trigger: GGACAGGGCCTGAGTGATCCAGGGGAAAACCCAGCC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAGAGACCAATGCAGGTaGGGACAGAGTAGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIRDQCR*GQSSEV
Trigger: CACTTCACTACTCTGTCCCCACCTGCATTGGTCTCT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCTTCACCCTGTGGACTaGTCCCCTCGGGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLHPVD*SPREAH
Trigger: ATGGGCTTCCCGAGGGGACCAGTCCACAGGGTGAAG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAACCATTTGGCAGGCTaGGTATGGCCTATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTNHLAG*VWPMGH
Trigger: ATGCCCCATAGGCCATACCCAGCCTGCCAAATGGTT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGCTTGGGGATATGGTaGCACAGTGGAACAAGACCA +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGLGIW*HSGTRP
Trigger: TGGTCTTGTTCCACTGTGCCACCATATCCCCAAGCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGTAGGCCCCAGTGGGTaGTGGTTTGCTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSVGPSG*WFAAAV
Trigger: GACTGCTGCAGCAAACCACCACCCACTGGGGCCTAC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAACCTGGGTTCTACAGTaGAGGACCAGTCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKETWVLQ*RTSQGT
Trigger: TGTGCCTTGACTGGTCCTCCACTGTAGAACCCAGGT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACATGAACCCCTTGACCTaGAGGTGGGTTCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHMNPLT*RWVPGN
Trigger: ATTCCCAGGAACCCACCTCCAGGTCAAGGGGTTCAT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCATGATCCCAATGAGTaGGAAGGAAGGGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHHDPNE*EGRALS
Trigger: GGAAAGGGCCCTTCCTTCCCACTCATTGGGATCATG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATATAGCTTCCCTCTCTaGGCCTCAGATCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIYSFPL*ASDPAS
Trigger: AGAAGCAGGATCTGAGGCCCAGAGAGGGAAGCTATA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACAAGATCTTATCTGGGTaGAAACTTGATTTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHKILSG*KLDFEP
Trigger: AGGCTCAAAATCAAGTTTCCACCCAGATAAGATCTT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACAATTTTCCAAGATCTaGTCTTTTGCAGTGCCCGAC +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTQFSKI*SFAVPD
Trigger: GTCGGGCACTGCAAAAGACCAGATCTTGGAAAATTG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATACTCAACTGTCTTCTTaGAAGGTGTCCCAATTCCCA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHTQLSS*KVSQFP
Trigger: TGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCATAAGCAGAGGAAAATaGCTAGAATCTTACAGGACC +
Preference number: 4 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACISRGK*LESYRT
Trigger: GGTCCTGTAAGATTCTAGCCATTTTCCTCTGCTTAT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTGTGTTTTGATGGGGTaGGGAGTACAATCTATGATA +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFCVLMG*GVQSMI
Trigger: TATCATAGATTGTACTCCCCACCCCATCAAAACACA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACTAGAGGTGGGATTCTaGGGGAGGTTCATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELEVGF*GRFIWV
Trigger: CACCCAAATGAACCTCCCCCAGAATCCCACCTCTAG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTGTCCTTATGACACTTaGGCATCCCTCCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFCPYDT*ASLPMF
Trigger: GAACATGGGGAGGGATGCCCAAGTGTCATAAGGACA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTGGGGAGCGTCTGACTaGTGTGCAGGTCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHWGASD*CAGLNS
Trigger: GCTATTCAGACCTGCACATCAGTCAGACGCTCCCCA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAGAAATGTCCAGGGTaGGACAGGCGACGGTTTCGC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQKCPG*DRRRFR
Trigger: GCGAAACCGTCGCCTGTCTCACCCTGGACATTTCTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTAGGAGGTGCGGGCAGTaGGGTGAAAAGGGATGCTAC +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPRRCGQ*GEKGCY
Trigger: GTAGCATCCCTTTTCACCTCACTGCCCGCACCTCCT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGAAGTCAAGAGCAAGTaGCTCAGATTCAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIEVKSK*LRFRDG
Trigger: TCCATCCCTGAATCTGAGTCACTTGCTCTTGACTTC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAATGGATCTAAGCAATaGCTTTGGGTTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNNGSKQ*LWVSSL
Trigger: CAAGCTGGAAACCCAAAGTCATTGCTTAGATCCATT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGATTGTAAAAGTTTTTaGCTGTGTGGGCCACATCGT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHDCKSF*LCGPHR
Trigger: ACGATGTGGCCCACACAGTCAAAAACTTTTACAATC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGAAACCAACCCTGCTaGCACCTTGATCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLERNQPC*HLDLGT
Trigger: AGTCCCAAGATCAAGGTGTCAGCAGGGTTGGTTTCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAATACAGCCACAGAACTaGGATCCAGAGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIIQPQN*DPELLE
Trigger: TTCCAACAGCTCTGGATCTCAGTTCTGTGGCTGTAT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAAACTCATTGGGGTTaGTATGGCACCCACAACATG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQTHWG*YGTHNM
Trigger: CATGTTGTGGGTGCCATATCAACCCCAATGAGTTTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGGGAAGGCATGCTGTaGTGGATTAGTGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHWEGML*WISDVC
Trigger: GCAGACATCACTAATCCATCACAGCATGCCTTCCCA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGAAGGATGGAGAGAATaGCTGGAGATTTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHEGWRE*LEISAP
Trigger: AGGGGCTGAAATCTCCAGTCATTCTCTCCATCCTTC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGAAGGATGGAGAGAATaGCTGGAGATTTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEEGWRE*LEISAP
Trigger: AGGGGCTGAAATCTCCAGTCATTCTCTCCATCCTTC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCTGTCTTTCAAACCCTaGCATATTTATAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPLSFKP*HIYRDS
Trigger: GCTGTCTCTATAAATATGTCAGGGTTTGAAAGACAG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACGCCTCTCCAACCACTaGGACTTCTCAACAATGTCT +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKERLSNH*DFSTMS
Trigger: AGACATTGTTGAGAAGTCGCAGTGGTTGGAGAGGCG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAAACTCAGAGGCTGCTaGTCCTCGCTTTTCGTCATG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEKLRGC*SSLFVM
Trigger: CATGACGAAAAGCGAGGAGCAGCAGCCTCTGAGTTT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTTTTTGCAGGACAGCTaGCGGCTGAAGTACTTCACC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEFLQDS*RLKYFT
Trigger: GGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCTTTCCCACAGACTGTaGACGTCTGAGACATCCAGT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLELSHRL*TSETSS
Trigger: ACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTGGAGGAGGGGTTGCTaGTGGAGTCTGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSWRRGC*WSLAGK
Trigger: CTTACCAGCCAGACTCCAGCAGCAACCCCTCCTCCA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATTGAAGTTCTTCTGCTaGCGTGTGCACTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELKFFC*RVHCGE
Trigger: TTCCCCACAGTGCACACGGCAGCAGAAGAACTTCAA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGCACCACGTGCAGCCTaGAGTGCTCTCATTAGTGCT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHAPRAA*SALISA
Trigger: AGCACTAATGAGAGCACTGCAGGCTGCACGTGGTGC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCTGCATGCCCAGCCTaGTCTCGGCATCCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSACPA*SRHPSY
Trigger: GTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAAACATATATAAAATaGCTCCAAGACACACACACG +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQTYIK*LQDTHT
Trigger: CGTGTGTGTGTCTTGGAGGCATTTTATATATGTTTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTACAGGGCACCTGTGTaGAGCTGTGATGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHYRAPV*SCDGTR
Trigger: CCTTGTCCCATCACAGCTGCACACAGGTGCCCTGTA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAGTGGGTGGTGGTTTaGTGCAGCAGTCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQWVVV*CSSPRS
Trigger: GCTCCTAGGACTGCTGCAGCAAACCACCACCCACTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAAGTTCAAGCTTCCGTaGAAACTCCCAGTATGGTCC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIKFKLP*KLPVWS
Trigger: GGACCATACTGGGAGTTTGCACGGAAGCTTGAACTT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACAGAAGATGACAGGGTaGGGCTTCTTTGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIQKMTG*GFFGAF
Trigger: AAATGCACCAAAGAAGCCCCACCCTGTCATCTTCTG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATCTTCGGCCTCATCATaGACCTCTTCATTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKESSASS*TSSFSD
Trigger: GTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAGGTCGGTCGGGGTTaGTACCCTCTGATGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQVGRG*YPLMLS
Trigger: ACTCAGCATCAGAGGGTACCAACCCCGACCGACCTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCACGCATCACCCTGGCTaGTCCGGTTCAGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSTHHPG*SGSVLA
Trigger: AGCTAGGACTGAACCGGACCAGCCAGGGTGATGCGT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCCATTCTTCCCGGTTTaGAAGCAGGTTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHPFFPV*KQVWPP
Trigger: TGGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTGGAAGAGAAGTGAGTaGTTGGGTTTCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFWKRSE*LGFRHS
Trigger: TGAGTGCCTGAAACCCAACCACTCACTTCTCTTCCA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATAAGGACTGGAGCCTGTaGACCCAAGAAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHKDWSL*TQEVLV
Trigger: CACCAGGACTTCTTGGGTCCACAGGCTCCAGTCCTT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCAGGGTAGTAGACCCTaGCTGCCTCTTCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPQGSRP*LPLPFL
Trigger: GAGGAAGGGAAGAGGCAGCCAGGGTCTACTACCCTG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGTTCCACAAAGGGCTaGGTTTTCCCCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHCSTKG*VFPWIT
Trigger: AGTGATCCAGGGGAAAACCCAGCCCTTTGTGGAACA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATGATCAGCTGTAGGTaGGGATGGGAATGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEMISCR*GWEWWK
Trigger: CTTCCACCATTCCCATCCCCACCTACAGCTGATCAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGGGGGCTTGGGGATATaGTGGCACAGTGGAACAAGA +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPGGLGI*WHSGTR
Trigger: TCTTGTTCCACTGTGCCACCATATCCCCAAGCCCCC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTACCCACAACATGGTCTaGCAAAGGGGAATCCCAATA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFTHNMV*QRGIPI
Trigger: TATTGGGATTCCCCTTTGCCAGACCATGTTGTGGGT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTATAGGAATTCCAGCCTaGCACGTAGTAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFIGIPA*HVVSAL
Trigger: CAGAGCACTTACTACGTGCCAGGCTGGAATTCCTAT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCAGATGTACATTTCCTaGAAATCCGGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHQMYIS*KSGLLL
Trigger: CAGCAGCAGCCCGGATTTCCAGGAAATGTACATCTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATATTCAGAAACAAGCCTaGGAAAGCTTGGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNIQKQA*ESLGRT
Trigger: TGTTCTTCCCAAGCTTTCCCAGGCTTGTTTCTGAAT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATATTCAGAAACAAGCCTaGGAAAGCTTGGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHIQKQA*ESLGRT
Trigger: TGTTCTTCCCAAGCTTTCCCAGGCTTGTTTCTGAAT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAAGCCATGGTATGTTaGAGAAGCCACCAACACACA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQAMVC*RSHQHT
Trigger: TGTGTGTTGGTGGCTTCTCCAACATACCATGGCTTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTACAGCCCAAATGGCTTaGCTTCTGGAAGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFTAQMA*LLEVSE
Trigger: CTCAGAAACTTCCAGAAGCCAAGCCATTTGGGCTGT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTCCTCCTGATATCCTaGTACCAGCCTTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNFLLIS*YQPFQN
Trigger: ATTTTGGAAAGGCTGGTACCAGGATATCAGGAGGAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACTCAGAAAAGGCCTCTaGTTATTGTTGGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTLRKGL*LLLACI
Trigger: AATACAGGCCAACAATAACCAGAGGCCTTTTCTGAG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATAGGTGGCCTGAGTACTaGTCTGACTCCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHRWPEY*SDSSKH
Trigger: GTGCTTGCTGGAGTCAGACCAGTACTCAGGCCACCT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTATACCCTGGGAGTCTaGCGGTCAGCAAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHYTLGV*RSAKML
Trigger: AAGCATCTTTGCTGACCGCCAGACTCCCAGGGTATA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp ATGCTAGTGGTCAGCTCTTTTCTGTGGGCCAGTACATaGACATTGCCTCCTTCAGTACCAGGTAAGGTATCA +
Preference number: 4 (lower is better)
Translates to: MLVVSSFLWAST*TLPPSVPGKVS
Trigger: TGATACCTTACCTGGTACTGAAGGAGGCAATGTCAATGTACTGGCCCACAGAAAAGAGCTGACCACTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TGTCGCCCACCACTCAGAAAAGGCCTCTGGTTATTGTaGGCCTGTATTTATTTCCTCCTGATATCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: CRPPLRKGLWLL*ACIYFLLISWY
Trigger: GTACCAGGATATCAGGAGGAAATAAATACAGGCCAACAATAACCAGAGGCCTTTTCTGAGTGGTGGGCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AACTCAGGGGACATCTGGCAATGTCTGGAGATGGTTTaGGATGTCACACTTTGGATGTCAACTGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NSGDIWQCLEMV*DVTLWMSTGGF
Trigger: AAAGCCTCCAGTTGACATCCAAAGTGTGACATCCAAAACCATCTCCAGACATTGCCAGATGTCCCCTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGGACCAGCGTGGCACTaGCAGTGTGTTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPGPAWH*QCVCRE
Trigger: TTCTCTGCAAACACACTGTCAGTGCCACGCTGGTCC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCACTGATGTGCAGGTCTaGATAGCGAGGTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSTDVQV*IARWLP
Trigger: CGGAAGCCACCTCGCTATTCAGACCTGCACATCAGT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCCATGCCAATCTGGCTaGGGTTGGGTTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSPCQSG*GWVSCL
Trigger: CAGGCATGAAACCCAACCTCAGCCAGATTGGCATGG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTGGCACAAGGGAACATaGCAAGGACTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPWHKGT*QGLEPV
Trigger: CACAGGCTCCAGTCCTTGTCATGTTCCCTTGTGCCA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGCCAAGGCTTCCTGGTaGATCTTCACCCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPAKASW*IFTLWT
Trigger: AGTCCACAGGGTGAAGATTCACCAGGAAGCCTTGGC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGGGAATGGTGGAAGGTaGGATAAGGCTGGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHGNGGR*DKAGFV
Trigger: CACGAAACCAGCCTTATCTCACCTTCCACCATTCCC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGCCCTGCTAACACTTTaGTTTTGGACTTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTALLTL*FWTSGI
Trigger: GATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTCTGTAAACATTTCTTaGGCACTTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNSVNIS*ALTMCQ
Trigger: CTGGCACATAGTAAGTGCTCAAGAAATGTTTACAGA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGGGAAGAGCACTCACTaGTGTACGCCTCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPGKSTH*CTPLRN
Trigger: GTTCCTGAGAGGCGTACATCAGTGAGTGCTCTTCCC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAACACACAGCAGATTTaGCCCCTCCATTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKENTQQI*PLHWKT
Trigger: TGTCTTCCAATGGAGGGGTCAAATCTGCTGTGTGTT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGCTTCTGGAAGTTTCTaGGGCCTGAGTTCTAAACCT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTASGSF*GLSSKP
Trigger: AGGTTTAGAACTCAGGCCTCAGAAACTTCCAGAAGC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATCCAAGTTCCCTAACTaGGAAGAAACATCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFISKFPN*EETSAE
Trigger: CTCTGCAGATGTTTCTTCTCAGTTAGGGAACTTGGA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAGGACAGAGGTTCACTaGATTCCAGACAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHRTEVH*IPDKPR
Trigger: TCTGGGTTTGTCTGGAATTCAGTGAACCTCTGTCCT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCAGAAGGGCTTTCCCTaGGTAGCCTCAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHQKGFP*VASESN
Trigger: GTTGCTTTCTGAGGCTACTCAGGGAAAGCCCTTCTG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCTCTCTTCTTCACAGTaGACTGGGAATTGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLSSSQ*TGNCKE
Trigger: TTCCTTGCAATTCCCAGTTCACTGTGAAGAAGAGAG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATATTCATAGAGTGATATaGACTGTCCCAGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNIHRVI*TVPERG
Trigger: ACCTCTTTCTGGGACAGTTCATATCACTCTATGAAT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCTGTCTTTCAAACCCTaGCATATTTATAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLSFKP*HIYRDS
Trigger: GCTGTCTCTATAAATATGTCAGGGTTTGAAAGACAG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTGGACCAGTTCGCACTaGTGTAAGGCTTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFWTSSH*CKAFCK
Trigger: TTTGCAAAAAGCCTTACAGCAGTGCGAACTGGTCCA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACTTGTTTGGAAAGGTTaGCTCCTGACATGTGGACAT +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFILVWKG*LLTCGH
Trigger: ATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATGCCTGTGCCCATTTaGCAGATTATTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEMPVPI*QIIASA
Trigger: AGCAGAGGCAATAATCTGGCAAATGGGCACAGGCAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTGGGTTTCATGCCTGTaGCCATTTGCCAGATTATTG +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFWVSCL*PFARLL
Trigger: CAATAATCTGGCAAATGGGCACAGGCATGAAACCCA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGCACCACGTGCAGCCTaGAGTGCTCTCATTAGTGCT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSAPRAA*SALISA
Trigger: AGCACTAATGAGAGCACTGCAGGCTGCACGTGGTGC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGACAGAACTGAGGAGTaGCCCGTCATTGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSDRTEE*PVIGTV
Trigger: GACTGTCCCAATGACGGGGCACTCCTCAGTTCTGTC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATAACATCCTCCCTTTGTaGTCCCCCAACAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHNILPL*SPNRTP
Trigger: AGGAGTCCTGTTGGGGGAGCACAAAGGGAGGATGTT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAACATCCTCCCTTTGTaGTCCCCCAACAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPNILPL*SPNRTP
Trigger: AGGAGTCCTGTTGGGGGAGCACAAAGGGAGGATGTT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATTAGGAAATGGGAGCTaGATGATCCCAATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTLGNGS*MIPMSG
Trigger: CCCACTCATTGGGATCATGCAGCTCCCATTTCCTAA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGGATTAGTGATGTCTaGCAAGAGTACAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHWISDV*QEYSRG
Trigger: TCCCCTGCTGTACTCTTGGCAGACATCACTAATCCA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGCATAAACAAGTGCTaGCCGCTCAATGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGINKC*PLNGGR
Trigger: CCTCCCTCCATTGAGCGGGCAGCACTTGTTTATGCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGTCTGGGATCTTCTCTaGCTGGTCCAGGTATGGTCA +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPVWDLL*LVQVWS
Trigger: TGACCATACCTGGACCAGGCAGAGAAGATCCCAGAC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTACATCAACTCACTCTaGAACAGTCGACACAAACAA +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHYINSL*NSRHKQ
Trigger: TTGTTTGTGTCGACTGTTGCAGAGTGAGTTGATGTA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAAGAAACAACAGGCTTaGTGGCTCAGAGGCACACAA +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHKKQQA*WLRGTQ
Trigger: TTGTGTGCCTCTGAGCCAGCAAGCCTGTTGTTTCTT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCACACTCCTCCCGGTTaGCTCCGTATTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSHTPPG*LRISPQ
Trigger: CTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGGTCCAGTCTTGTTTaGAAAGGTTGCCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHWSSLV*KGCLLT
Trigger: TGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCTCTGTCGTGGGCCACTaGATGGTCCAGTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPSVVGH*MVQSCL
Trigger: CAAACAAGACTGGACCATCCAGTGGCCCACGACAGA...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCTGCCTACGCTGCTGTaGATCTTGAGGTTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPLPTLL*ILRFKG
Trigger: ACCCTTGAACCTCAAGATCCACAGCAGCGTAGGCAG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGTAGTAGTGGGATGCTaGCAGGTTGAAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHVVVGC*QVEVLL
Trigger: CAGAAGAACTTCAACCTGCCAGCATCCCACTACTAC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCATAGCCAGCCATTCTaGATGCGCAGTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPHSQPF*MRSLSS
Trigger: GGAGGACAAACTGCGCATCCAGAATGGCTGGCTATG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATTTCCCATGCCAATCTaGCTGAGGTTGGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEFPMPI*LRLGFM
Trigger: CATGAAACCCAACCTCAGCCAGATTGGCATGGGAAA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGTCATTGGGACAGTCTaGCTCTTGCTTGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPVIGTV*LLLVKG
Trigger: CCCCTTGACAAGCAAGAGCCAGACTGTCCCAATGAC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGACACAGGCTTCCGATaGGGAAGCTACTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSDTGFR*GSYLRT
Trigger: GGTCCTCAAGTAGCTTCCCCATCGGAAGCCTGTGTC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAGGGCTTTGAAAACATaGGCAAATGACCCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIRALKT*ANDPEV
Trigger: AACCTCTGGGTCATTTGCCCATGTTTTCAAAGCCCT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTGGAAGAGAAGTGAGTaGTTGGGTTTCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEWKRSE*LGFRHS
Trigger: TGAGTGCCTGAAACCCAACCACTCACTTCTCTTCCA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAAGGACTGGAGCCTGTaGACCCAAGAAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSKDWSL*TQEVLV
Trigger: CACCAGGACTTCTTGGGTCCACAGGCTCCAGTCCTT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCCTTGCCAAAGGCTGTaGTTGGACATTTTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHPCQRL*LDILVN
Trigger: ATTAACTAAAATGTCCAACCACAGCCTTTGGCAAGG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATCTCAAGATAATGATTaGCCTGAGCTCCGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFISQDND*PELRVY
Trigger: GTAGACACGGAGCTCAGGCCAATCATTATCTTGAGA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAAAATCACAGAGCGTTaGAACCCTAATCTAATAAGA +
Preference number: 4 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFKITER*NPNLIR
Trigger: TCTTATTAGATTAGGGTTCCAACGCTCTGTGATTTT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAATGGGACGTGTTGATTaGGGCAAGCTTGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTMGRVD*GKLGKH
Trigger: ATGCTTACCAAGCTTGCCCCAATCAACACGTCCCAT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATGGGACGTGTTGATTaGGGCAAGCTTGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEMGRVD*GKLGKH
Trigger: ATGCTTACCAAGCTTGCCCCAATCAACACGTCCCAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTAACAGAATGGGTATaGATTGCAGGGCCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTVTEWV*IAGPRE
Trigger: TTCTCGAGGCCCTGCAATCCATACCCATTCTGTTAC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTCGTTTTTAAAATGCTaGGTCTGCAATTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHSFLKC*VCNLEA
Trigger: AGCCTCCAAATTGCAGACCCAGCATTTTAAAAACGA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGTCAGCTCTTTTCTGTaGGCCAGTACATTGACATTG +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIVSSFL*ASTLTL
Trigger: CAATGTCAATGTACTGGCCCACAGAAAAGAGCTGAC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTGGTGTTCTTGTTCATaGAACCACTGTCCACATGGA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFWCSCS*NHCPHG
Trigger: TCCATGTGGACAGTGGTTCCATGAACAAGAACACCA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACAAGCCATGGTATGTTaGAGAAGCCACCAACACACA +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEQAMVC*RSHQHT
Trigger: TGTGTGTTGGTGGCTTCTCCAACATACCATGGCTTG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCAACTACAGCCCAAATaGCTTGGCTTCTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFQLQPK*LGFWKF
Trigger: AAACTTCCAGAAGCCAAGCCATTTGGGCTGTAGTTG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTCTCTCTTCCCCATTaGGCTTTAGGCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTVSLPH*ALGFRT
Trigger: TGTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGAC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATTTCCTTTCTCCCATaGAAGGTTGCAGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEISFLP*KVADGR
Trigger: CCTGCCATCTGCAACCTTCCATGGGAGAAAGGAAAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATGTGTTTTGATGGGGTaGGGAGTACAATCTATGATA +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTCVLMG*GVQSMI
Trigger: TATCATAGATTGTACTCCCCACCCCATCAAAACACA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACACCATCGGTCCGCGTTaGTCTGTACAAGAATTAGTC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHTIGPR*SVQELV
Trigger: GACTAATTCTTGTACAGACCAACGCGGACCGATGGT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACATGGAGAAAAGAATATaGACCATCGGTCCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHMEKRI*TIGPRW
Trigger: CCAACGCGGACCGATGGTCCATATTCTTTTCTCCAT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCAGCAACAAGACATTaGCAACAAGTGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTSATRH*QQVRKR
Trigger: TCTCTTTCTCACTTGTTGCCAATGTCTTGTTGCTGA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AGAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTaGCAGCTCTCCTGCACACCACCACGCACACTGTTA +
Preference number: 4 (lower is better)
Translates to: RNFTNLLKKEKP*QLSCTPPRTLL
Trigger: TAACAGTGTGCGTGGTGGTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TTGAGCCTTCCATTCAGGGAAGAAACCAAAGAGCAATaGGAGTCAGGCTCCTTTTCCTGCCCTTTATATGCA +
Preference number: 4 (lower is better)
Translates to: LSLPFREETKEQ*ESGSFSCPLYA
Trigger: TGCATATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTGAATGGAAGGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TGGCTAGAATCTTACAGGACCAATACATTACATTTGTaGTCCAGGACGCACTTAAGCTGCCAATGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: WLESYRTNTLHL*SRTHLSCQCPN
Trigger: GTTGGGGCATTGGCAGCTTAAGTGCGTCCTGGACAACAAATGTAATGTATTGGTCCTGTAAGATTCTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAGACTGTGCACGTCTaGGACATCCAGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQTVHV*DIQYLV
Trigger: CACCAAGTACTGGATGTCTCAGACGTGCACAGTCTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTGGATGATCAGAAGATaGCAGGGTGGGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHWMIRR*QGGASL
Trigger: CAAAGAAGCCCCACCCTGTCATCTTCTGATCATCCA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCCACATCTGGGAAGATaGACTGCTGCTTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEPHLGR*TAACIC
Trigger: ACAAATACAAGCAGCAGTTCATCTTCCCAGATGTGG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATCGGGTTGGGGTGTCTaGAAACAGATATTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSGWGV*KQIFPK
Trigger: CTTTGGAAATATCTGTTTTCAGACACCCCAACCCGA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAGGGGGTCAGGGCTTTaGAAACATGGGCAAATGACC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSRGSGL*KHGQMT
Trigger: GGTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGTCATTGTATAGAATaGGTTGCAGGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHCHCIE*VAGEAG
Trigger: ACCAGCCTCACCTGCAACTCATTCTATACAATGACA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGGGAATGGTGGAAGGTaGGATAAGGCTGGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSGNGGR*DKAGFV
Trigger: CACGAAACCAGCCTTATCTCACCTTCCACCATTCCC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAAGCCACTCAGTGTGTaGCATTTTGTTATTATGGCC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFKPLSV*HFVIMA
Trigger: GGCCATAATAACAAAATGTCACACACTGAGTGGCTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGTAGTACCAGCAACTTaGGAGGCTAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSVVPAT*EAKVGG
Trigger: TCCTCCCACCTTAGCCTCTCAAGTTGCTGGTACTAC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGAGTTTTCCATGGAATaGAAGGTCTATGGGACATGC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHEFSME*KVYGTC
Trigger: GCATGTCCCATAGACCTTTCATTCCATGGAAAACTC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTCCCAGAAGATAAATaGTTTTTCTCCAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVPEDK*FFSKQA
Trigger: TGCCTGCTTGGAGAAAAATCATTTATCTTCTGGGAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACCCAGAAGCCCAGACTaGACAGCAGAAATTTTACAA +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTPRSPD*TAEILQ
Trigger: TTGTAAAATTTCTGCTGTTCAGTCTGGGCTTCTGGG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTTTTTGCAGGACAGCTaGCGGCTGAAGTACTTCACC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHFLQDS*RLKYFT
Trigger: GGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCCGCGTTGCGCTCCTaGAAGGCTACCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSALRS*KATFFL
Trigger: CAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTGCAGCAGAGACCAATaGAGGTGGGGACAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPCSRDQ*RWGQSS
Trigger: ACTACTCTGTCCCCACCTGCATTGGTCTCTGCTGCA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCAGACTGACATTTGCTaGCTGTCACTCCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSQTDIC*LSLPLE
Trigger: CTCCAAGGGGAGTGACAGGCAGCAAATGTCAGTCTG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGGTGGATTGTTACTCTaGCTCCTAGACATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPGGLLL*LLDILG
Trigger: GCCCAGGATGTCTAGGAGGCAGAGTAACAATCCACC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATTAAAATGCTGGGTCTaGAATTTGGAGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFILKCWV*NLEAGF
Trigger: GAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATACCCAGGAGGGACTCTaGCAACCCAGATGTACATTT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHTQEGL*QPRCTF
Trigger: AAATGTACATCTGGGTTGGCAGAGTCCCTCCTGGGT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCAGACAAACCCAGAATaGCAGCATCTGTGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHQTNPE*QHLCED
Trigger: GTCCTCACACAGATGCTGGCATTCTGGGTTTGTCTG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCTTAACATCCTCCAATaGCCAGGACAGTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLNILQ*PGQSPP
Trigger: AGGTGGCGACTGTCCTGGGCATTGGAGGATGTTAAG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGTCACCAGTACCAGGTaGTACTGGTATCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPVTSTR*YWYLVG
Trigger: CCCCACAAGATACCAGTAGCACCTGGTACTGGTGAC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCTGGTCTTTTGCAGTaGCCGACTCGTCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSGLLQ*PTRPLC
Trigger: ACAGAGAGGACGAGTCGGGCACTGCAAAAGACCAGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGACTCCAAATTGGATaGCATCTTGGAAGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLERLQIG*HLGSGV
Trigger: GACTCCACTTCCAAGATGGCATCCAATTTGGAGTCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAGATGTAATGTGACTTaGCTTATCTGCCCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIRCNVT*LICPSQ
Trigger: TTGACTGGGGCAGATAAGGCAAGTCACATTACATCT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCATAGCCAGCCATTCTaGATGCGCAGTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSHSQPF*MRSLSS
Trigger: GGAGGACAAACTGCGCATCCAGAATGGCTGGCTATG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGGCCATTCCCTGGCGTaGAGTTCATACCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSGHSLA*SSYQIV
Trigger: CACAATCTGGTATGAACTCCACGCCAGGGAATGGCC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAATAACGCATCACCCTaGCTGGTCCGGTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSNNASP*LVRFSP
Trigger: AGGACTGAACCGGACCAGCCAGGGTGATGCGTTATT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAGGGCTTTGAAAACATaGGCAAATGACCCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHRALKT*ANDPEV
Trigger: AACCTCTGGGTCATTTGCCCATGTTTTCAAAGCCCT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGAACATGACAAGGACTaGAGCCTGTGGACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPEHDKD*SLWTQE
Trigger: TTCTTGGGTCCACAGGCTCCAGTCCTTGTCATGTTC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTGTTCCACAAAGGGCTaGGTTTTCCCCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHCSTKG*VFPWIT
Trigger: AGTGATCCAGGGGAAAACCCAGCCCTTTGTGGAACA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAAAAGCAAGACTGACTaGAACAACTCGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEKSKTD*NNSLLS
Trigger: ACTCAGCAGCGAGTTGTTCCAGTCAGTCTTGCTTTT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAGCTGTAGGTGGGGATaGGAATGGTGGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSCRWG*EWWKVR
Trigger: TCTCACCTTCCACCATTCCCATCCCCACCTACAGCT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCTTCTGGCATCCAGATaGGTGAGAGATGATACATCT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHLLASR*VRDDTS
Trigger: AGATGTATCATCTCTCACCCATCTGGATGCCAGAAG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCATCTTCAAGGGCACCTaGGTTCTACAGTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSIFKGT*VLQWRT
Trigger: GGTCCTCCACTGTAGAACCCAGGTGCCCTTGAAGAT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAAACTGGTAACAGAATaGGTATGGATTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTKLVTE*VWIAGP
Trigger: AGGCCCTGCAATCCATACCCATTCTGTTACCAGTTT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGTGGGTTCCTGGGAATaGATGAGCCCAAAGACTCGT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSVGSWE*MSPKTR
Trigger: ACGAGTCTTTGGGCTCATCCATTCCCAGGAACCCAC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATAAGTCTCAGAGGCTaGGATTGTAACATCCCCATG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEISLRG*DCNIPM
Trigger: CATGGGGATGTTACAATCCCAGCCTCTGAGACTTAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTCAGCTCTTTTCTGTaGGCCAGTACATTGACATTG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTVSSFL*ASTLTL
Trigger: CAATGTCAATGTACTGGCCCACAGAAAAGAGCTGAC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCCTCTCCCATGTTTCTaGTCCCCCGTGAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPPLPCF*SPVSFL
Trigger: AAGAAAACTCACGGGGGACCAGAAACATGGGAGAGG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCACATCCTTCACTGTGTaGAGGCAGGCAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSTSFTV*RQAETE
Trigger: CTCTGTCTCTGCCTGCCTCCACACAGTGAAGGATGT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTACAAATATACACAGTaGACCCTCCATCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHYKYTQ*TLHPSG
Trigger: GCCAGATGGATGGAGGGTCCACTGTGTATATTTGTA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AAATGGCTAGAATCTTACAGGACCAATACATTACATTaGTTGTCCAGGACGCACTTAAGCTGCCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: KWLESYRTNTLH*LSRTHLSCQCP
Trigger: GGGGCATTGGCAGCTTAAGTGCGTCCTGGACAACAAATGTAATGTATTGGTCCTGTAAGATTCTAGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GAATACTCTGGAGGGGCTGCTGATGCTGAGAAAGTGTaGATGAAATCATTATCCACAATAGACAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EYSGGAADAEKV*MKSLSTIDSGS
Trigger: TGAGCCACTGTCTATTGTGGATAATGATTTCATCAACACTTTCTCAGCATCAGCAGCCCCTCCAGAGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAGGACTCCTCAAGGGTaGCAGGCAGGGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSRTPQG*QAGKSF
Trigger: AAAAGATTTCCCTGCCTGTCACCCTTGAGGAGTCCT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGGAACAACTCGCTGCTaGGTCAGTGACTTATGTGTA +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPGTTRC*VSDLCV
Trigger: TACACATAAGTCACTGACTCAGCAGCGAGTTGTTCC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCCTGGAAGAGTTGGGTaGAATTTATGTGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEPGRVG*NLCANP
Trigger: TGGATTTGCACATAAATTTCACCCAACTCTTCCAGG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTTCGGGACTCAAGATTaGGAACCAGTGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSFGTQD*EPVWGK
Trigger: CTTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGCTGTTGGAATTCAGTaGTGGGACGTGTTGATTGGG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPAVGIQ*WDVLIG
Trigger: CCCAATCAACACGTCCCATCACTGAATTCCAACAGC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCCTTGGAGTTCAAAGTaGTTCCCTTGCAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSPWSSK*FPCRCV
Trigger: CACACACCTGCAAGGGAATCACTTTGAACTCCAAGG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAGGACAGAGGTTCACTaGATTCCAGACAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPRTEVH*IPDKPR
Trigger: TCTGGGTTTGTCTGGAATTCAGTGAACCTCTGTCCT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGGCCTATTCATAGAGTaGTATGAACTGTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEGLFIE*YELSQK
Trigger: TTTCTGGGACAGTTCATATCACTCTATGAATAGGCC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGCAAAGACGTCAGAGTaGTTGGAGAAGGGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSAKTSE*LEKGSL
Trigger: TAAGCTCCCCTTCTCCAAGCACTCTGACGTCTTTGC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTACTTCAGAGCTCTATaGAAAGGTGCCACACGCCAT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHYFRAL*KGATRH
Trigger: ATGGCGTGTGGCACCTTTGCATAGAGCTCTGAAGTA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATATCCTGCTATTGCTCTaGTTGGGGACAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHILLLL*LGTDFP
Trigger: AGGGAAATCTGTCCCCAAGCAGAGCAATAGCAGGAT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAATACCATCCAGCCCTaGCAATGGTGCCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSNTIQP*QWCPSN
Trigger: GTTAGAAGGGCACCATTGGCAGGGCTGGATGGTATT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTCCCTGTACCACAGTTaGCCCATTGGAACGAGAATA +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHSLYHS*PIGTRI
Trigger: TATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAAGTTCAAGCTTCCGTaGAAACTCCCAGTATGGTCC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPKFKLP*KLPVWS
Trigger: GGACCATACTGGGAGTTTGCACGGAAGCTTGAACTT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTATTTGTGGTTGACTTaGTTCTTGTCTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEYLWLT*FLSLFP
Trigger: GGGGAAGAGAGACAAGAAGCAAGTCAACCACAAATA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAAAAACCTATTTCCCTaGAATGTTCACTTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHKNLFP*NVHLRS
Trigger: ACTCCTTAAGTGAACATTGCAGGGAAATAGGTTTTT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGGCGGTCAGCAAAGATaGTTTGTTTTCTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEGGQQR*FVFCLS
Trigger: TGAAAGACAGAAAACAAAGCATCTTTGCTGACCGCC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGGCGGTCAGCAAAGATaGTTTGTTTTCTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEGGQQR*FVFCLS
Trigger: TGAAAGACAGAAAACAAAGCATCTTTGCTGACCGCC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGTGACTTGCCTTATCTaGCCCAGTCAACTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPVTCLI*PSQLLL
Trigger: AAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCAC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGATGTAATGTGACTTaGCTTATCTGCCCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTRCNVT*LICPSQ
Trigger: TTGACTGGGGCAGATAAGGCAAGTCACATTACATCT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCAGAAGATGACAGGGTaGGGCTTCTTTGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPQKMTG*GFFGAF
Trigger: AAATGCACCAAAGAAGCCCCACCCTGTCATCTTCTG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGTAGTAGTGGGATGCTaGCAGGTTGAAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHVVVGC*QVEVLL
Trigger: CAGAAGAACTTCAACCTGCCAGCATCCCACTACTAC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTATGATCAGCTGTAGGTaGGGATGGGAATGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPMISCR*GWEWWK
Trigger: CTTCCACCATTCCCATCCCCACCTACAGCTGATCAT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGTCCTTATAAGAAGATaGCCATATGAAGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFVLIRR*PYEDRD
Trigger: GTCCCTATCTTCATATGGCCATCTTCTTATAAGGAC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATGCAAATAGCATGTTaGCATAAACAAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEMQIAC*HKQVLP
Trigger: GGGCAGCACTTGTTTATGCCAACATGCTATTTGCAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAATGCAAATAGCATGTTaGCATAAACAAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTMQIAC*HKQVLP
Trigger: GGGCAGCACTTGTTTATGCCAACATGCTATTTGCAT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATTCCTCCTGATATCCTaGTACCAGCCTTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTFLLIS*YQPFQN
Trigger: ATTTTGGAAAGGCTGGTACCAGGATATCAGGAGGAA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCCTCTCCCATGTTTCTaGTCCCCCGTGAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPPLPCF*SPVSFL
Trigger: AAGAAAACTCACGGGGGACCAGAAACATGGGAGAGG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGAGGTTGAGAAACCCTaGCTTAGAATGAACATCTCT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEEVEKP*LRMNIS
Trigger: AGAGATGTTCATTCTAAGCCAGGGTTTCTCAACCTC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGCTACTGGTATCTTGTaGGGAGAGTTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSATGIL*GELRKL
Trigger: CAGCTTCCTCAACTCTCCCCACAAGATACCAGTAGC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTTGGATGTCACACTTTaGATGTCAACTGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLELDVTL*MSTGGF
Trigger: AAAGCCTCCAGTTGACATCCAAAGTGTGACATCCAA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCAGTCACACGGGACTaGACAGAACTGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSVTRD*TELPHL
Trigger: AAGATGTGGCAGTTCTGTCCAGTCCCGTGTGACTGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCCCAAAATCAGGCTTTaGGGAAAGCAGGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSPKIRL*GKQGKA
Trigger: TGCCTTTCCCTGCTTTCCCCAAAGCCTGATTTTGGG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATCAGCAACAAGACATTaGCAACAAGTGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFISATRH*QQVRKR
Trigger: TCTCTTTCTCACTTGTTGCCAATGTCTTGTTGCTGA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp ACAGCAGGGGACACTGGTGGTAGATCCATTACATATTaGTACTCCTTGGACCAGATCTTTATCCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: TAGDTGGRSITY*YSLDQIFILLD
Trigger: ATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGTAATGGATCTACCACCAGTGTCCCCTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AGGACCTCAAGATCTTATCTGGGTGGAAACTTGATTTaGAGCCTTCCATTCAGGGAAGAAACCAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: RTSRSYLGGNLI*SLPFREETKEQ
Trigger: TTGCTCTTTGGTTTCTTCCCTGAATGGAAGGCTCAAAATCAAGTTTCCACCCAGATAAGATCTTGAGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TCCACTAGGACCTCAAGATCTTATCTGGGTGGAAACTaGATTTTGAGCCTTCCATTCAGGGAAGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: STRTSRSYLGGN*ILSLPFREETK
Trigger: TTTGGTTTCTTCCCTGAATGGAAGGCTCAAAATCAAGTTTCCACCCAGATAAGATCTTGAGGTCCTAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CTTTCCATAAATACATTTCCACGTTCACACATGTCCTaGACCTCAACACTTCAGGGGCCTATTCATAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSINTFPRSHMS*TSTLQGPIHRV
Trigger: CACTCTATGAATAGGCCCCTGAAGTGTTGAGGTCAAGGACATGTGTGAACGTGGAAATGTATTTATGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCCCTTCACAATTTCTTaGGCAATCTGCCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHPFTIS*AICLVL
Trigger: CAAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGCTCCTTGGTTTTATaGATAATCTGTATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFSSLVL*IICILE
Trigger: TTCCAGGATACAGATTATTCATAAAACCAAGGAGCT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGTTCCTGGGAATGGATaGGCCCAAAGACTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPVPGNG*AQRLVF
Trigger: AAAAACGAGTCTTTGGGCTCATCCATTCCCAGGAAC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGGCAGCCTGTCAGTTTaGGAACATAAGTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHGSLSV*EHKFKL
Trigger: AAGCTTGAACTTATGTTCTCAAACTGACAGGCTGCC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGAGTTTTCCATGGAATaGAAGGTCTATGGGACATGC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPEFSME*KVYGTC
Trigger: GCATGTCCCATAGACCTTTCATTCCATGGAAAACTC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAAATCACCCACTGAATaGATGGTTGGTGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHKSPTE*MVGEEI
Trigger: GATTTCTTCACCAACCATTCATTCAGTGGGTGATTT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAACCCTGGCTTAGAATaGACATCTCTTTATCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTNPGLE*TSLYPS
Trigger: AGAAGGATAAAGAGATGTTCATTCTAAGCCAGGGTT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCTCTCTTCTTCACAGTaGACTGGGAATTGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHLSSSQ*TGNCKE
Trigger: TTCCTTGCAATTCCCAGTTCACTGTGAAGAAGAGAG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTACCTTAGAGTACCTTaGTGCCCATGCTGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSYLRVP*CPCCSY
Trigger: GTAGCTACAGCATGGGCATCAAGGTACTCTAAGGTA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCTCCATCAACAGGACTaGTACATTCTTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHLHQQD*YILSHT
Trigger: AGTGTGGGAAAGAATGTATCAGTCCTGTTGATGGAG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTTGGTGGAAAACCTGTaGTTGATGGAGTTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPLVENL*LMELPR
Trigger: TCTCGGCAACTCCATCAAGCACAGGTTTTCCACCAA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTTGGTGGAAAACCTGTaGTTGATGGAGTTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLVENL*LMELPR
Trigger: TCTCGGCAACTCCATCAAGCACAGGTTTTCCACCAA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGCAGGGAAATCTTTTaGAAACGTGTTATCATAGGT +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGREIF*KRVIIG
Trigger: ACCTATGATAACACGTTTGCAAAAGATTTCCCTGCC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGATGTGCAAATCCACATaGCCTTTAAAGAAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEMCKST*PLKKAE
Trigger: CTCAGCTTTCTTTAAAGGGCATGTGGATTTGCACAT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGACTCGTTTTTAAAATaGTGGGTCTGCAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHDSFLK*WVCNLE
Trigger: CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGACTCGTTTTTAAAATaGTGGGTCTGCAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEDSFLK*WVCNLE
Trigger: CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTAGACTCCAAACTGGATaGCATATCAGAAGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPRLQTG*HIRSGG
Trigger: ACCCCCACTTCTGATATGGCATCCAGTTTGGAGTCT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGACTTCAGGACCCAATaGAGGGCACTAAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPDFRTQ*RALRNR
Trigger: TCTATTTCTTAGTGCCCTGCATTGGGTCCTGAAGTC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGAAGCACCTACTGTGTaGCAGGTATTGCGTAACGTT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSEAPTV*QVLRNV
Trigger: AACGTTACGCAATACCTGGCACACAGTAGGTGCTTC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGTGACTTGCCTTATCTaGCCCAGTCAACTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPVTCLI*PSQLLL
Trigger: AAGCAGAAGTTGACTGGGGCAGATAAGGCAAGTCAC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAAAAGCAAGACTGACTaGAACAACTCGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPKSKTD*NNSLLS
Trigger: ACTCAGCAGCGAGTTGTTCCAGTCAGTCTTGCTTTT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCACCCACAACATGGTCTaGCAAAGGGGAATCCCAATA +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSTHNMV*QRGIPI
Trigger: TATTGGGATTCCCCTTTGCCAGACCATGTTGTGGGT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATCTATGGGACATGCTTaGGAAACAAGGTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFISMGHA*ETRSYL
Trigger: TAAATAAGACCTTGTTTCCCAAGCATGTCCCATAGA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAATATACTTTTCACATTaGCCTCCAAGCCATGGTATG +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTIYFSH*PPSHGM
Trigger: CATACCATGGCTTGGAGGCCAATGTGAAAAGTATAT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACACCATCCCAATGACTTaGTTGAAGATGAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHTIPMT*LKMKTQ
Trigger: CTGAGTTTTCATCTTCAACCAAGTCATTGGGATGGT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCACAGCCCAAATGGCTTaGCTTCTGGAAGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSTAQMA*LLEVSE
Trigger: CTCAGAAACTTCCAGAAGCCAAGCCATTTGGGCTGT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAAGATCTTATCTGGGTaGAAACTTGATTTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFKILSG*KLDFEP
Trigger: AGGCTCAAAATCAAGTTTCCACCCAGATAAGATCTT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCATGGAAGGTTGCAGATaGCAGGATGCTGGATTTGAA +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPMEGCR*QDAGFE
Trigger: TTCAAATCCAGCATCCTGCCATCTGCAACCTTCCAT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp ATCACAGAGCGTTGGAACCCTAATCTAATAAGATTGTaGTCTTTATCAGAAGAGGAGGAGATACTGGGGATG +
Preference number: 4 (lower is better)
Translates to: ITERWNPNLIRL*SLSEEEEILGM
Trigger: CATCCCCAGTATCTCCTCCTCTTCTGATAAAGACAACAATCTTATTAGATTAGGGTTCCAACGCTCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGGAAGCCCATGTATATaGCGGTTTGCTAAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPGSPCI*RFAKSK
Trigger: CTTGCTTTTAGCAAACCGTCATATACATGGGCTTCC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTCAACTGGAGGCTTTTaGAATCCACCAACATACCCA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSTGGF*NPPTYP
Trigger: TGGGTATGTTGGTGGATTTCAAAAGCCTCCAGTTGA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTGGGTTTCATGCCTGTaGCCATTTGCCAGATTATTG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPWVSCL*PFARLL
Trigger: CAATAATCTGGCAAATGGGCACAGGCATGAAACCCA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCAAACATATATAAAATaGCTCCAAGACACACACACG +
Preference number: 4 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHQTYIK*LQDTHT
Trigger: CGTGTGTGTGTCTTGGAGGCATTTTATATATGTTTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCATGTTGTTGCTTCATTaGTACCAGAGACAGCCATTC +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPMLLLH*YQRQPF
Trigger: GAATGGCTGTCTCTGGTAGCAATGAAGCAACAACAT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCCAGGCAAAGATTTATaGATCACACAGTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSPGKDL*ITQLGR
Trigger: TCTGCCCAACTGTGTGATGCATAAATCTTTGCCTGG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAACAAACCAGCATTTTaGCCATCATACCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTNKPAF*PSYLKC
Trigger: ACATTTCAGGTATGATGGGCAAAATGCTGGTTTGTT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCAAGCCTCGCTAATTTaGAGTAGCCACATATACCCT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPQASLI*SSHIYP
Trigger: AGGGTATATGTGGCTACTGCAAATTAGCGAGGCTTG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGACAGAGTAGTGAAGTaGGGAAAGATCGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPDRVVK*GKIEKS
Trigger: TGACTTCTCGATCTTTCCCCACTTCACTACTCTGTC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCACCATCAGCCAGATGTaGTGTTCTTGTTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSTISQM*CSCSWN
Trigger: GTTCCATGAACAAGAACACCACATCTGGCTGATGGT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCACCCACTGAATGAATaGTTGGTGAAGAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPHPLNE*LVKKSL
Trigger: CAGAGATTTCTTCACCAACCATTCATTCAGTGGGTG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTTCTTAGAAGGGCTGTaGAAGGATGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSFLEGL*KDGEND
Trigger: GTCATTCTCTCCATCCTTCCACAGCCCTTCTAAGAA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTACTCAACTGTCTTCTTaGAAGGTGTCCCAATTCCCA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPTQLSS*KVSQFP
Trigger: TGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCTGTCGAGTGGATCCTaGTACAAGATCAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSLSSGS*YKIKSQ
Trigger: TTGAGACTTGATCTTGTACCAGGATCCACTCGACAG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTGCAGTTTTTACACTTaGGGCCAAAAAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSCSFYT*GQKASL
Trigger: AAGGGATGCTTTTTGGCCTCAAGTGTAAAAACTGCA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCCTGGAAGAGTTGGGTaGAATTTATGTGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSPGRVG*NLCANP
Trigger: TGGATTTGCACATAAATTTCACCCAACTCTTCCAGG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCTCAACCCCATGAGATaGATCCTTCATATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLNPMR*ILHILG
Trigger: ACCAAGAATATGAAGGATTCATCTCATGGGGTTGAG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGTCCCAGAAGATAAATaGTTTTTCTCCAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSVPEDK*FFSKQA
Trigger: TGCCTGCTTGGAGAAAAATCATTTATCTTCTGGGAC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGGCCTATTCATAGAGTaGTATGAACTGTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSGLFIE*YELSQK
Trigger: TTTCTGGGACAGTTCATATCACTCTATGAATAGGCC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGGCAGGGAAATCTTTTaGAAACGTGTTATCATAGGT +
Preference number: 4 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHGREIF*KRVIIG
Trigger: ACCTATGATAACACGTTTGCAAAAGATTTCCCTGCC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCTAACACATAGTAGATaGTCAACAAATCACCCACTG +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPLTHSR*STNHPL
Trigger: CAGTGGGTGATTTGTTGAGCATCTACTATGTGTTAG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAAGTCTATCATGTTTTaGACCAGTTCGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSKSIMF*TSSHCC
Trigger: ACAGCAGTGCGAACTGGTCCAAAACATGATAGACTT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTTCATTCTCCGACGTTaGCTCCACTTCAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSFILRR*LHFNLK
Trigger: CTTCAAATTGAAGTGGAGCCAACGTCGGAGAATGAA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCAAACACACAAATCTTaGTCGTGTCATTGTATAGAA +
Preference number: 4 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEQTHKS*SCHCIE
Trigger: TTCTATACAATGACACGACCAAGATTTGTGTGTTTG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCCTCAAAGAATTATCTaGCCCCAAATAGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPPQRII*PQIAQQ
Trigger: CTGTTGAGCTATTTGGGGCCAGATAATTCTTTGAGG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCAGTCAACTTCTGCTTTaGGATAGGGAGGAAGAATGT +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSQLLL*DREEEC
Trigger: ACATTCTTCCTCCCTATCCCAAAGCAGAAGTTGACT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGTTAAGTCTGTCGAGTaGATCCTGGTACAAGATCAA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPVKSVE*ILVQDQ
Trigger: TTGATCTTGTACCAGGATCCACTCGACAGACTTAAC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AAAATCACAGAGCGTTGGAACCCTAATCTAATAAGATaGTTGTCTTTATCAGAAGAGGAGGAGATACTGGGG +
Preference number: 4 (lower is better)
Translates to: KITERWNPNLIR*LSLSEEEEILG
Trigger: CCCCAGTATCTCCTCCTCTTCTGATAAAGACAACAATCTTATTAGATTAGGGTTCCAACGCTCTGTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp ATCTTAGAGGTCCTTCTAGATCACCATCCCAATGACTaGGTTGAAGATGAAAACTCAGGTGAAAACTTAACC +
Preference number: 4 (lower is better)
Translates to: ILEVLLDHHPND*VEDENSGENLT
Trigger: GGTTAAGTTTTCACCTGAGTTTTCATCTTCAACCAAGTCATTGGGATGGTGATCTAGAAGGACCTCTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp GACACTGGTGGTAGATCCATTACATATTTGTACTCCTaGGACCAGATCTTTATCCTTCTAGATCTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: DTGGRSITYLYS*DQIFILLDLRG
Trigger: ACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGTAATGGATCTACCACCAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp CTACATGAGTTGCAAATTTATATATTTGTGGTTGACTaGCTTCTTGTCTCTCTTCCCCATTGGGCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: LHELQIYIFVVD*LLVSLPHWALG
Trigger: GCCTAAAGCCCAATGGGGAAGAGAGACAAGAAGCAAGTCAACCACAAATATATAAATTTGCAACTCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTATTCATAGAGTGATATaGACTGTCCCAGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPIHRVI*TVPERG
Trigger: ACCTCTTTCTGGGACAGTTCATATCACTCTATGAAT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCTAACACATAGTAGATaGTCAACAAATCACCCACTG +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPLTHSR*STNHPL
Trigger: CAGTGGGTGATTTGTTGAGCATCTACTATGTGTTAG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGTCCTTATAAGAAGATaGCCATATGAAGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSVLIRR*PYEDRD
Trigger: GTCCCTATCTTCATATGGCCATCTTCTTATAAGGAC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCATCCACAATAGACAGTaGCTCAAGAAATGCAAATTG +
Preference number: 4 (lower is better)
Translates to: EISFILPKHFQCMLVPGPIHNRQ*LKKCKL
Trigger: CAATTTGCATTTCTTGAGCCACTGTCTATTGTGGAT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AACTCAAGGGTTAGTGATATATTAAGTGCTCGTGGGTaGCACAAAGCTAAGAAAATTCAAGGAATACTCTGG +
Preference number: 4 (lower is better)
Translates to: NSRVSDILSARG*HKAKKIQGILW
Trigger: CCAGAGTATTCCTTGAATTTTCTTAGCTTTGTGCAACCCACGAGCACTTAATATATCACTAACCCTTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AAGCACCTACTGTGTGCCAGGTATTGCGTAACGTTATaGACATTCATTATTTCATTCACTCCCTCCAATAAA +
Preference number: 4 (lower is better)
Translates to: KHLLCARYCVTL*TFIISFTPSNK
Trigger: TTTATTGGAGGGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGTAGGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR TCA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTAGCTCCTTGGTTTTATaGATAATCTGTATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSSLVL*IICILE
Trigger: TTCCAGGATACAGATTATTCATAAAACCAAGGAGCT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR GCA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCAACAAACCAGCATTTTaGCCATCATACCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSNKPAF*PSYLKC
Trigger: ACATTTCAGGTATGATGGGCAAAATGCTGGTTTGTT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CCA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCATCCACAATAGACAGTaGCTCAAGAAATGCAAATTG +
Preference number: 4 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSIHNRQ*LKKCKL
Trigger: CAATTTGCATTTCTTGAGCCACTGTCTATTGTGGAT...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp TCCCCCGTGAGTTTTCTTTCCATAGATCTACATGAGTaGCAAATTTATATATTTGTGGTTGACTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SPVSFLSIDLHE*QIYIFVVDLLL
Trigger: AAGAAGCAAGTCAACCACAAATATATAAATTTGCAACTCATGTAGATCTATGGAAAGAAAACTCACGGGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
3UTR CAA 72 bp AAACATGGAGAAAAGAATATGGACCATCGGTCCGCGTaGGTCTGTACAAGAATTAGTCTTTATATATATAAT +
Preference number: 4 (lower is better)
Translates to: KHGEKNMDHRSA*VCTRISLYIYN
Trigger: ATTATATATATAAAGACTAATTCTTGTACAGACCAACGCGGACCGATGGTCCATATTCTTTTCTCCATGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp CGGCTGCGGCGGCTACTGCGGCTGGCTGCTGTCTCCTCCCCGCGCTaGTGCTGCTGCTGCTGCTGCCGCCGCCGGGCTCCGGGGGTGACG +
Preference number: 5 (lower is better)
Translates to: RLRRLLRLAAVSSPR*CCCCCCRRRAPGVT
Trigger: CGTCACCCCCGGAGCCCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCGCCGCAGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 90 bp CGGCGGCTACTGCGGCTGGCTGCTGTCTCCTCCCCGCGCTGCTGCTaGTGCTGCTGCTGCCGCCGCCGGGCTCCGGGGGTGACGGTTGCT +
Preference number: 5 (lower is better)
Translates to: RRLLRLAAVSSPRCC*CCCCRRRAPGVTVA
Trigger: AGCAACCGTCACCCCCGGAGCCCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 90 bp CTGCGGCGGCTACTGCGGCTGGCTGCTGTCTCCTCCCCGCGCTGCTaGTGCTGCTGCTGCTGCCGCCGCCGGGCTCCGGGGGTGACGGTT +
Preference number: 5 (lower is better)
Translates to: LRRLLRLAAVSSPRC*CCCCCRRRAPGVTV
Trigger: AACCGTCACCCCCGGAGCCCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCGCCGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 90 bp CGGCTACTGCGGCTGGCTGCTGTCTCCTCCCCGCGCTGCTGCTGCTaGTGCTGCTGCCGCCGCCGGGCTCCGGGGGTGACGGTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: RLLRLAAVSSPRCCC*CCCRRRAPGVTVAA
Trigger: TGCAGCAACCGTCACCCCCGGAGCCCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 90 bp CTACTGCGGCTGGCTGCTGTCTCCTCCCCGCGCTGCTGCTGCTGCTaGTGCTGCCGCCGCCGGGCTCCGGGGGTGACGGTTGCTGCAATC +
Preference number: 5 (lower is better)
Translates to: LLRLAAVSSPRCCCC*CCRRRAPGVTVAAI
Trigger: GATTGCAGCAACCGTCACCCCCGGAGCCCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 90 bp TGCTTTAGCGCGTTCTCAAGGTGCTGTCTGCATTGCTCCCGCGGCTaGGGCGGCTACTGCGGCTGGCTGCTGTCTCCTCCCCGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: CFSAFSRCCLHCSRG*GGYCGWLLSPPRAA
Trigger: AGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCGCCGCAGCCGCGGGAGCAATGCAGACAGCACCTTGAGAACGCGCTAAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS CCA 90 bp TGGGGCTGGTGTGACAATAGTGCTGGACGCACTTGGACGGGACCCTaGGGCTCTGGGAGAGATGGGTGCGGATCCACGGGGTGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: WGWCDNSAGRTWTGP*GSGRDGCGSTGWAP
Trigger: CGGAGCCCACCCCGTGGATCCGCACCCATCTCTCCCAGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACTATTGTCACACCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp TTCTTGGCTTTGGGCGTGTGGGCCTCGTCCACGCGGTGCCCCAGCTaGAACTCGTGGGATTTGCTCCGATGCAGCGCGGTGAATCCCGGG +
Preference number: 5 (lower is better)
Translates to: FLALGVWASSTRCPS*NSWDLLRCSAVNPG
Trigger: CCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGCCCACACGCCCAAAGCCAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp AAGAAGGAGCGGAGGGAGCGCTCGGACAGCAGCGGGGAGCGCTGCTaGGAGGGGATGTTCTCGCAGCTGCCTACGCTGCTGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: KKERRERSDSSGERC*EGMFSQLPTLLWIL
Trigger: CAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCCCCTCTCAGCAGCGCTCCCCGCTGCTGTCCGAGCGCTCCCTCCGCTCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS CCA 90 bp AGGACCTCCTTGCGCACATCGACGATTCGGAACCAGTGCCGTAGCTaGGGGAAGCCGTCCAGCTCCGCGTTGCGCTCCTGCAAGGCTACC +
Preference number: 5 (lower is better)
Translates to: RTSLRTSTIRNQCRS*GKPSSSALRSCKAT
Trigger: GGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTTCCGAATCGTCGATGTGCGCAAGGAGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp TTGGGCGTGTGGGCCTCGTCCACGCGGTGCCCCAGCTGGAACTCGTaGGATTTGCTCCGATGCAGCGCGGTGAATCCCGGGATCAAGTGT +
Preference number: 5 (lower is better)
Translates to: LGVWASSTRCPSWNS*DLLRCSAVNPGIKC
Trigger: ACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGCCCACACGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp TTTCCTTCCAAGATTGGATTCGAGGTCACCGGATGCAGGATGACCTaGGGCGCCCGGGTCGGCGTCTCCGGCACCGGCACCACATCTGGG +
Preference number: 5 (lower is better)
Translates to: FPSKIGFEVTGCRMT*GARVGVSGTGTTSG
Trigger: CCCAGATGTGGTGCCGGTGCCGGAGACGCCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS GCA 90 bp CACGGTTTGGAGTGCTTTAGCGCGTTCTCAAGGTGCTGTCTGCATTaGTCCCGCGGCTGCGGCGGCTACTGCGGCTGGCTGCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: HGLECFSAFSRCCLH*SRGCGGYCGWLLSP
Trigger: AGGAGACAGCAGCCAGCCGCAGTAGCCGCCGCAGCCGCGGGAGCAATGCAGACAGCACCTTGAGAACGCGCTAAAGCACTCCAAACCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 90 bp TTCGGAACCAGTGCCGTAGCTGGGGGAAGCCGTCCAGCTCCGCGTTaGGCTCCTGCAAGGCTACCTTCTTTTTGCAGGACAGCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: FGTSAVAGGSRPAPR*APARLPSFCRTAAG
Trigger: GCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTTCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp ATTTCCTCCAGGACCTCCTTGCGCACATCGACGATTCGGAACCAGTaGCGTAGCTGGGGGAAGCCGTCCAGCTCCGCGTTGCGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ISSRTSLRTSTIRNQ*RSWGKPSSSALRSC
Trigger: GCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTTCCGAATCGTCGATGTGCGCAAGGAGGTCCTGGAGGAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp TTGCTCTTCTTCTTGGCTTTGGGCGTGTGGGCCTCGTCCACGCGGTaGCCCAGCTGGAACTCGTGGGATTTGCTCCGATGCAGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: LLFFLALGVWASSTR*PSWNSWDLLRCSAV
Trigger: CACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGCCCACACGCCCAAAGCCAAGAAGAAGAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGACGGTGGTGACGATGTaGGGGGTGCGCGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVTVVTM*GVRGGV
Trigger: CACCCCGCCGCGCACCCCCAACATCGTCACCACCGT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCTGGTCTGGCTGGCCTaGCGTGGGAAGCTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVLVWLA*RGKLRA
Trigger: GGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCAG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp ATGGATTTCCTTCCAAGATTGGATTCGAGGTCACCGGATGCAGGATaGCCTGGGGCGCCCGGGTCGGCGTCTCCGGCACCGGCACCACAT +
Preference number: 5 (lower is better)
Translates to: MDFLPRLDSRSPDAG*PGAPGSASPAPAPH
Trigger: ATGTGGTGCCGGTGCCGGAGACGCCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS GCA 90 bp CAGTGCCGTAGCTGGGGGAAGCCGTCCAGCTCCGCGTTGCGCTCCTaGAAGGCTACCTTCTTTTTGCAGGACAGCTGCCGGCTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: QCRSWGKPSSSALRS*KATFFLQDSCRLKY
Trigger: GTACTTCAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp TCCTCTGTGTCGGGGGACAGCTGGCGGATGATCTCTGGTGCCAGGTaGCATAGCCAGCCATTCTGGATGCGCAGTTTGTCCTCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: SSVSGDSWRMISGAR*HSQPFWMRSLSSRL
Trigger: CAGGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGCTATGCCACCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAGGAGTGCCCCGTCATaGGGACAGTCTGGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGRSAPS*GQSGSC
Trigger: GCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp GGTGCCCCAGCTGGAACTCGTGGGATTTGCTCCGATGCAGCGCGGTaGATCCCGGGATCAAGTGTATCAGTTTTCGGGAGGAGGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GAPAGTRGICSDAAR*IPGSSVSVFGRRAV
Trigger: CACCGCCCTCCTCCCGAAAACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp CCCATTCGCTTTCCTGCAGAGACTTGCTGCATCAGGGCTCTGGCATaGACCCACCCCCTCCCTAATCTCTGCCCCTCCAACGCTGCACCC +
Preference number: 5 (lower is better)
Translates to: PIRFPAETCCIRALA*THPLPNLCPSNAAP
Trigger: GGGTGCAGCGTTGGAGGGGCAGAGATTAGGGAGGGGGTGGGTTCATGCCAGAGCCCTGATGCAGCAAGTCTCTGCAGGAAAGCGAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCCGTCCAGCTCCGCGTaGCGCTCCTGCAAGGCTACC +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILPSSSA*RSCKAT
Trigger: GGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGCGGCCGTGGTACACTaGCCCAAAGCGGCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWAAVVH*PKAALS
Trigger: GGAAAGGGCCGCTTTGGGCAAGTGTACCACGGCCGC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGCGGCCGTGGTACACTaGCCCAAAGCGGCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGAAVVH*PKAALS
Trigger: GGAAAGGGCCGCTTTGGGCAAGTGTACCACGGCCGC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATCTGCTGGTTGGGTCTaGAAAGGCCATTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGSAGWV*KGHSLA
Trigger: CGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACTGGGACACAGAGTGTaGTGTTGGGATGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLGHRV*CWDGEV
Trigger: CACCTCCCCATCCCAACACAACACTCTGTGTCCCAG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp AGAAGGGGAGCTTATCCTCCTCTGTGTCGGGGGACAGCTGGCGGATaGTCTCTGGTGCCAGGTGGCATAGCCAGCCATTCTGGATGCGCA +
Preference number: 5 (lower is better)
Translates to: RRGAYPPLCRGTAGG*SLVPGGIASHSGCA
Trigger: TGCGCATCCAGAATGGCTGGCTATGCCACCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp TCGTCCACGCGGTGCCCCAGCTGGAACTCGTGGGATTTGCTCCGATaGAGCGCGGTGAATCCCGGGATCAAGTGTATCAGTTTTCGGGAG +
Preference number: 5 (lower is better)
Translates to: SSTRCPSWNSWDLLR*SAVNPGIKCISFRE
Trigger: CTCCCGAAAACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAAAGGCTACCTTCTTTTaGCAGGACAGCTGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGKATFF*QDSCRL
Trigger: CAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCTCTTCTTCTTGGCTTaGGGCGTGTGGGCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLFFLA*GVWASS
Trigger: GGACGAGGCCCACACGCCCAAAGCCAAGAAGAAGAG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAGGCTTCCGTAGAGGGTaGTTGATGTCACACGGAACG +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGGFRRG*LMSHGT
Trigger: CGTTCCGTGTGACATCAACAACCCTCTACGGAAGCC...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACCAAGATCTGGTCTTTaGCAGTGCCCGACTCGTCCT +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGPRSGL*QCPTRP
Trigger: AGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTCCTCCAGGACCTCCTaGCGCACATCGACGATTCGG +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGSSRTS*RTSTIR
Trigger: CCGAATCGTCGATGTGCGCAAGGAGGTCCTGGAGGA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTGCACACTCCTCCCGGTaGGCTCCGTATTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPAHSSR*APYFST
Trigger: TGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGC...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTGGAACTCGTGGGATTaGCTCCGATGCAGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVWNSWD*LRCSAV
Trigger: CACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCTGTCCGGACTAACCTaGCTGGATCTCCTCGGTGGA +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLSGLT*LDLLGG
Trigger: TCCACCGAGGAGATCCAGCAAGGTTAGTCCGGACAG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATTCCGTAGAGGGTTGTaGATGTCACACGGAACGGAC +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGFRRGL*MSHGTD
Trigger: GTCCGTTCCGTGTGACATCAACAACCCTCTACGGAA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTCCCGCTTGAAGGCCTaGAGCTGGTCCTCGTTGTCC +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWSRLKA*SWSSLS
Trigger: GGACAACGAGGACCAGCTCAAGGCCTTCAAGCGGGA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTTCTGGATGCGCAGTTaGTCCTCCCGCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHFWMRS*SSRLPA
Trigger: GGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCCAGGTCGGTCGGGGTaGGTACCCTCTGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHPGRSG*VPSDAE
Trigger: CTCAGCATCAGAGGGTACCAACCCCGACCGACCTGG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGAGGCCGCCGAGCAGTaGTCCAGTGCTCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPEAAEQ*SSAPRS
Trigger: CGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGGTGGGGGCTGGTCTaGCCAGAGACTCTCTCACAT +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGWGLV*PETLSH
Trigger: ATGTGAGAGAGTCTCTGGCAAGACCAGCCCCCACCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp CCGGGCCGAGAGGAGGGACAGGTTCATCTCCTCGAAGTCATCCTCTaGCTCTTCGGCCTCATCATGGACCTCTTCATTCTCCGACGTTGG +
Preference number: 5 (lower is better)
Translates to: PGREEGQVHLLEVIL*LFGLIMDLFILRRW
Trigger: CCAACGTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAGGAGATGAACCTGTCCCTCCTCTCGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS TCA 90 bp GCTGAGAGGGGATGTTCTCGCAGCTGCCTACGCTGCTGTGGATCTTaGGGTTCAAGGGTTTGCTCTTCTTCTTGGCTCTGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: AERGCSRSCLRCCGS*GSRVCSSSWLWAAA
Trigger: AGCGGCAGCCCAGAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCCCCTCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS GCA 90 bp TCCGCGTTGCGCTCCTGCAAGGCTACCTTCTTTTTGCAGGACAGCTaGCGGCTGAAGTACTTCACCAGCTTGCTCTCCAGGGTCCGGATT +
Preference number: 5 (lower is better)
Translates to: SALRSCKATFFLQDS*RLKYFTSLLSRVRI
Trigger: AATCCGGACCCTGGAGAGCAAGCTGGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp GGGCACACGGGATTGTTCTCCTTCCCCGTCTCTGTCGTGGGCCACTaGATGGTCCAGTCTTGTTTGGAAAGGTTGCCTCCTGACATGTGG +
Preference number: 5 (lower is better)
Translates to: GHTGLFSFPVSVVGH*MVQSCLERLPPDMW
Trigger: CCACATGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGCCCACGACAGAGACGGGGAAGGAGAACAATCCCGTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp ATTGACCCATTCGCTTTCCTGCAGAGACTTGCTGCATCAGGGCTCTaGCATGAACCCACCCCCTCCCTAATCTCTGCCCCTCCAACGCTG +
Preference number: 5 (lower is better)
Translates to: IDPFAFLQRLAASGL*HEPTPSLISAPPTL
Trigger: CAGCGTTGGAGGGGCAGAGATTAGGGAGGGGGTGGGTTCATGCCAGAGCCCTGATGCAGCAAGTCTCTGCAGGAAAGCGAATGGGTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCTGTGCTTGATGGAGTaGCCGAGATCTCTGCGAGGG +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLCLME*PRSLRG
Trigger: CCCTCGCAGAGATCTCGGCAACTCCATCAAGCACAG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCCAATCTGGCTGAGGTaGGGTTTCATGCCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWPIWLR*GFMPVP
Trigger: GGGCACAGGCATGAAACCCAACCTCAGCCAGATTGG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGAGGCCGCCGAGCAGTaGTCCAGTGCTCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNEAAEQ*SSAPRS
Trigger: CGACCTGGGAGCACTGGACAACTGCTCGGCGGCCTC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGCAGGATGCTGGATTaGAATCCTAGTCGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGRMLD*NPSRVA
Trigger: GGCCACGCGACTAGGATTCAAATCCAGCATCCTGCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTGTGTTGGGGAGAGGTaGACCCCATCTAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGCVGER*TPSRAE
Trigger: CTCTGCCCTAGATGGGGTCAACCTCTCCCCAACACA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGACACTTCAGGCTGTATaGCAGGCTTGGCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWTLQAV*QAWPVA
Trigger: GGCCACAGGCCAAGCCTGCAATACAGCCTGAAGTGT...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp GCTGAGAGGGGATGTTCTCGCAGCTGCCTACGCTGCTGTGGATCTTaGGGTTCAAGGGTTTGCTCTTCTTCTTGGCTTTGGGCGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AERGCSRSCLRCCGS*GSRVCSSSWLWACG
Trigger: CCCACACGCCCAAAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCCCCTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp GGAGTTCATACCAGATTGTGCCAAGGGCAAAGACGTCAGAGTGCTTaGAGAAGGGGAGCTTATCCTCCTCTGTGTCGGGGGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GVHTRLCQGQRRQSA*RRGAYPPLCRGTAG
Trigger: GCCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTTCTCCAAGCACTCTGACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTCCTCCAGGACCTCCTaGCGCACATCGACGATTCGG +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSSRTS*RTSTIR
Trigger: CCGAATCGTCGATGTGCGCAAGGAGGTCCTGGAGGA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCTGGTCTGGCTGGCCTaGCGTGGGAAGCTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLVWLA*RGKLRA
Trigger: GGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCAG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAGTCGCCGGCCCAGGTaGGGATCAAGAGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHSRRPR*GSRGGR
Trigger: CCTCCCTCCTCTTGATCCCAACCTGGGCCGGCGACT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTCAGGGGGTCAGGGCTTaGAAAACATGGGCAAATGAC +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPQGVRA*KTWAND
Trigger: GTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCTG...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCACCATTCTTCCCGGTTaGGAAGCAGGTTTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILTILPG*EAGLAP
Trigger: GGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGGT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGATTCAGGAGGGCCCTTaGGGAAACACAGGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVIQEGP*GNTGVS
Trigger: GGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAAT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCTTTGGGTTTCCAGCTaGGCTCTGGGGATGGGGACA +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLWVSS*ALGMGT
Trigger: TGTCCCCATCCCCAGAGCCAAGCTGGAAACCCAAAG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAACATGTAAAAACCATTaGGCAGGCTGGGTATGGCCT +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGTCKNH*AGWVWP
Trigger: AGGCCATACCCAGCCTGCCAAATGGTTTTTACATGT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGCAGAATGGGTATGGATaGCAGGGCCTCGAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWQNGYG*QGLEKG
Trigger: TCCCTTCTCGAGGCCCTGCAATCCATACCCATTCTG...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp GAAAACCTGTGCTTGATGGAGTTGCCGAGATCTCTGCGAGGGATCTaGGGGGACCAGCGTGGCACTGACAGTGTGTTTGCAGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ENLCLMELPRSLRGI*GDQRGTDSVFAEKL
Trigger: CAACTTCTCTGCAAACACACTGTCAGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGATCTCGGCAACTCCATCAAGCACAGGTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS GCA 90 bp CTGGCTGAGGTTGGGTTTCATGCCTGTGCCCATTTGCCAGATTATTaGCTCTGCTGGTTGGGTCTTGAAAGGCCATTCCCTGGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LAEVGFHACAHLPDY*LCWLGLERPFPGVE
Trigger: CTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp ACATACTTCCTTGCCCCTCTCTGGTCATTGACCCATTCGCTTTCCTaGAGAGACTTGCTGCATCAGGGCTCTGGCATGAACCCACCCCCT +
Preference number: 5 (lower is better)
Translates to: TYFLAPLWSLTHSLS*RDLLHQGSGMNPPP
Trigger: AGGGGGTGGGTTCATGCCAGAGCCCTGATGCAGCAAGTCTCTGCAGGAAAGCGAATGGGTCAATGACCAGAGAGGGGCAAGGAAGTATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGTTGGAGGTAGCACATTaGGTCCTAAGCCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVLEVAH*VLSPSR
Trigger: CCTGGAAGGGCTTAGGACCAAATGTGCTACCTCCAA...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTTGGAGGTAGCACATTaGGTCCTAAGCCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWLEVAH*VLSPSR
Trigger: CCTGGAAGGGCTTAGGACCAAATGTGCTACCTCCAA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGAAGTACTTCACCAGCTaGCTCTCCAGGGTCCGGATT +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGKYFTS*LSRVRI
Trigger: AATCCGGACCCTGGAGAGCAAGCTGGTGAAGTACTT...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCCGTCCAGCTCCGCGTaGCGCTCCTGCAAGGCTACC +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFPSSSA*RSCKAT
Trigger: GGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGCACACTCCTCCCGGTaGGCTCCGTATTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFAHSSR*APYFST
Trigger: TGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAACGGTGGTGACGATGTaGGGGGTGCGCGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKETVVTM*GVRGGV
Trigger: CACCCCGCCGCGCACCCCCAACATCGTCACCACCGT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGGAACTCGTGGGATTaGCTCCGATGCAGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPWNSWD*LRCSAV
Trigger: CACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATTGAGGTTCAAGGGTTaGCTCTTCTTCTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLRFKG*LFFLAL
Trigger: CAAAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTTTGACTTGAGGTCCTaGTGTAGGATTCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPFDLRS*CRIPLA
Trigger: CGCCAAGGGAATCCTACACAAGGACCTCAAGTCAAA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTCTGGATGCGCAGTTaGTCCTCCCGCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNFWMRS*SSRLPA
Trigger: GGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGGACAGTCTGGCTCTaGCTTGTCAAGGGGAAACAA +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGTVWL*LVKGKQ
Trigger: TTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGACAAACATCCTCCCTTaGTGCTCCCCCAACAGGACT +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVTNILP*CSPNRT
Trigger: AGTCCTGTTGGGGGAGCACAAAGGGAGGATGTTTGT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCAACCCTGCTGACACCTaGATCTTGGGACTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILNPADT*ILGLPA
Trigger: GGCTGGAAGTCCCAAGATCAAGGTGTCAGCAGGGTT...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCTGGACATGAACCCCTaGACCTGGAGGTGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACLDMNP*TWRWVP
Trigger: AGGAACCCACCTCCAGGTCAAGGGGTTCATGTCCAG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTGTCTCTCTTCCCCATaGGGCTTTAGGCTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPCLSSP*GFRLQN
Trigger: GTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGACA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCGTTCACACATGTCCTaGACCTCAACACTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVRSHMS*TSTLQG
Trigger: CCCCTGAAGTGTTGAGGTCAAGGACATGTGTGAACG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGACTCAGCAACAAGACATaGGCAACAAGTGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLSNKT*ATSEKE
Trigger: CTCTTTCTCACTTGTTGCCAATGTCTTGTTGCTGAG...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp TGGATCTTGAGGTTCAAGGGTTTGCTCTTCTTCTTGGCTCTGGGCTaGCGCTGCCTCCTCGCTGGAATCGCAGACTCACTTGCATTTGGT +
Preference number: 5 (lower is better)
Translates to: WILRFKGLLFFLALG*RCLLAGIADSLAFG
Trigger: ACCAAATGCAAGTGAGTCTGCGATTCCAGCGAGGAGGCAGCGGCAGCCCAGAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS CCA 90 bp ACACGGGATTGTTCTCCTTCCCCGTCTCTGTCGTGGGCCACTGGATaGTCCAGTCTTGTTTGGAAAGGTTGCCTCCTGACATGTGGACAT +
Preference number: 5 (lower is better)
Translates to: TRDCSPSPSLSWATG*SSLVWKGCLLTCGH
Trigger: ATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGCCCACGACAGAGACGGGGAAGGAGAACAATCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGTCCGGATTTCTTTTaGTGTGAGGTCGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGPDFF*CEVVGG
Trigger: ACCTCCAACGACCTCACACAAAAAGAAATCCGGACC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCTGGATGGTCCAGTCTaGTTTGGAAAGGTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLDGPV*FGKVAS
Trigger: GGAGGCAACCTTTCCAAACAAGACTGGACCATCCAG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGATTGCAGTTTTTACACTaGAGGCCAAAAAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGLQFLH*RPKSIP
Trigger: AGGGATGCTTTTTGGCCTCAAGTGTAAAAACTGCAA...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTTTGACTTGAGGTCCTaGTGTAGGATTCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWFDLRS*CRIPLA
Trigger: CGCCAAGGGAATCCTACACAAGGACCTCAAGTCAAA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGTAGGTCTCTCTTCTaGTTCAAAGGCCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGRSLF*FKGPAE
Trigger: TTCTGCTGGGCCTTTGAACAAGAAGAGAGACCTACC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCAGTCTGGCTCTTGCTaGTCAAGGGGAAACAAGAGT +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVQSGSC*SRGNKS
Trigger: ACTCTTGTTTCCCCTTGACAAGCAAGAGCCAGACTG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCCCTCAGAAGTCATCTaGGCTTTCCAAATGGCAAGG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVPSEVI*AFQMAR
Trigger: CCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTAGTCGCCGGCCCAGGTaGGGATCAAGAGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFSRRPR*GSRGGR
Trigger: CCTCCCTCCTCTTGATCCCAACCTGGGCCGGCGACT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCAGAATGGGTATGGATaGCAGGGCCTCGAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACQNGYG*QGLEKG
Trigger: TCCCTTCTCGAGGCCCTGCAATCCATACCCATTCTG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGTCCCTGTACCACAGTaGCCCCATTGGAACGAGAAT +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHVPVPQ*PHWNEN
Trigger: ATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGAC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGATTTGACCCCTCCATaGGAAGACACCATCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHDLTPP*EDTISQ
Trigger: CTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCCAAGCCATGGTATGTaGGAGAAGCCACCAACACAC +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILPSHGM*EKPPTH
Trigger: GTGTGTTGGTGGCTTCTCCAACATACCATGGCTTGG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCTCCTGTGGGGCCTCGGGACCCTACTGGAACTCCTCCCTCTCTTCATCGGAATCCCAATGACTTGGTaGAAGATGAAAACTCAGGTG +
Preference number: 5 (lower is better)
Translates to: ELLWGLGTLLELLPLFIGIPMTW*KMKTQV
Trigger: CACCTGAGTTTTCATCTTCAACCAAGTCATTGGGAT...TCCGATGAAGAGAGGGAGGAGTTCCAGTAGGGTCCCGAGGCCCCACAGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTGTCTCTCTTCCCCATaGGGCTTTAGGCTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGCLSSP*GFRLQN
Trigger: GTTCTGAAGCCTAAAGCCCAATGGGGAAGAGAGACA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTGGTTGACTTGCTTCTaGTCTCTCTTCCCCATTGGG +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGWLTCF*SLFPIG
Trigger: CCCAATGGGGAAGAGAGACAAGAAGCAAGTCAACCA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTCCCAAAATCAGGCTTaGGGGAAAGCAGGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHSQNQA*GKAGKG
Trigger: GCCTTTCCCTGCTTTCCCCAAAGCCTGATTTTGGGA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCCGTTCACACATGTCCTaGACCTCAACACTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILRSHMS*TSTLQG
Trigger: CCCCTGAAGTGTTGAGGTCAAGGACATGTGTGAACG...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp TGCGCTCCTGCAAGGCTACCTTCTTTTTGCAGGACAGCTGCCGGCTaGAGTACTTCACCAGCTTGCTCTCCAGGGTCCGGATTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: CAPARLPSFCRTAAG*STSPACSPGSGFLF
Trigger: AAAAAGAAATCCGGACCCTGGAGAGCAAGCTGGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp ACGATAAGGGTCAGTCCACATACTTCCTTGCCCCTCTCTGGTCATTaGCCCATTCGCTTTCCTGCAGAGACTTGCTGCATCAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TIRVSPHTSLPLSGH*PIRFPAETCCIRAL
Trigger: CAGAGCCCTGATGCAGCAAGTCTCTGCAGGAAAGCGAATGGGTCAATGACCAGAGAGGGGCAAGGAAGTATGTGGACTGACCCTTATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS GCA 90 bp CCCATGCCAATCTGGCTGAGGTTGGGTTTCATGCCTGTGCCCATTTaGCAGATTATTGCCTCTGCTGGTTGGGTCTTGAAAGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: PMPIWLRLGFMPVPI*QIIASAGWVLKGHS
Trigger: GGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp TTGAGGTTCAAGGGTTTGCTCTTCTTCTTGGCTCTGGGCTGCCGCTaGCTCCTCGCTGGAATCGCAGACTCACTTGCATTTGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: LRFKGLLFFLALGCR*LLAGIADSLAFGSI
Trigger: AATGGAACCAAATGCAAGTGAGTCTGCGATTCCAGCGAGGAGGCAGCGGCAGCCCAGAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGGTTTGCTCTTCTTCTaGGCTTTGGGCGTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNGLLFF*ALGVWA
Trigger: GGCCCACACGCCCAAAGCCAAGAAGAAGAGCAAACC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCACGCTGCTGTGGATCTaGAGGTTCAAGGGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACTLLWI*RFKGLL
Trigger: GAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCTGTGCTTGATGGAGTaGCCGAGATCTCTGCGAGGG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLCLME*PRSLRG
Trigger: CCCTCGCAGAGATCTCGGCAACTCCATCAAGCACAG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGGATGTGGTCCTTGTaGATTTTGTTGGTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGMWSL*ILLVLG
Trigger: CCCCAAAACCAACAAAATCAACAAGGACCACATCCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGCCATCACCTCCCGCTaGAAGGCCTTGAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFAITSR*KALSWS
Trigger: GGACCAGCTCAAGGCCTTCAAGCGGGAGGTGATGGC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCATGCCTGTGCCCATTaGCCAGATTATTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFHACAH*PDYCLC
Trigger: GCAGAGGCAATAATCTGGCAAATGGGCACAGGCATG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACCAATCTGGCTGAGGTaGGGTTTCATGCCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTPIWLR*GFMPVP
Trigger: GGGCACAGGCATGAAACCCAACCTCAGCCAGATTGG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCCCTCAGAAGTCATCTaGGCTTTCCAAATGGCAAGG +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHPSEVI*AFQMAR
Trigger: CCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGGGACAGATTTCCCTTTaGTATCAGGTCACATGCAGG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVGQISL*YQVTCR
Trigger: CCTGCATGTGACCTGATACAAAAGGGAAATCTGTCC...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGGACAGATTTCCCTTTaGTATCAGGTCACATGCAGG +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWGQISL*YQVTCR
Trigger: CCTGCATGTGACCTGATACAAAAGGGAAATCTGTCC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTTCCTCCGTGTACCTTaGATGATCAGCTGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHFLRVP*MISCRW
Trigger: CCACCTACAGCTGATCATCAAAGGTACACGGAGGAA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCTTCAGGGCCTGAATaGCCTCCATATCACACAGGC +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPSGPE*PPYHTG
Trigger: GCCTGTGTGATATGGAGGCAATTCAGGCCCTGAAGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGTTTCGGGACTCAAGATaGAGAACCAGTGTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWFRDSR*RTSVGK
Trigger: TTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAAA...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGCTGGGTCTGCAATTaGGAGGCTGGTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPCWVCN*EAGFCP
Trigger: GGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACTGGACATGAACCCCTaGACCTGGAGGTGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTLDMNP*TWRWVP
Trigger: AGGAACCCACCTCCAGGTCAAGGGGTTCATGTCCAG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTATTTCCAATGCATGCTaGTCCCAGGACCCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPISNAC*SQDPFN
Trigger: ATTGAAAGGGTCCTGGGACAAGCATGCATTGGAAAT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTCCTCAGAAAGACCTTaGTCAGCAGCTCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACSSERP*SAALPQ
Trigger: CTGTGGGAGAGCTGCTGACAAAGGTCTTTCTGAGGA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTCCTCAGAAAGACCTTaGTCAGCAGCTCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSSERP*SAALPQ
Trigger: CTGTGGGAGAGCTGCTGACAAAGGTCTTTCTGAGGA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTTCTCCCATGGAAGGTaGCAGATGGCAGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPFSHGR*QMAGCW
Trigger: CCAGCATCCTGCCATCTGCAACCTTCCATGGGAGAA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGCAGAACTGCCACATCTaGTCCAGACTGTCTATGTTG +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVQNCHI*SRLSML
Trigger: CAACATAGACAGTCTGGACAAGATGTGGCAGTTCTG...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTTATGCATCACACAGTaGGGCAGAAGCCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLCITQ*GRSLTK
Trigger: CTTGGTCAGGCTTCTGCCCAACTGTGTGATGCATAA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTAAATTGGATGCCATCTaGGAAGTGGAGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPKLDAI*EVESEK
Trigger: CTTCTCTGACTCCACTTCCAAGATGGCATCCAATTT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAATGAAGGGACAAGGTaGCTCCACGCTGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNNEGTR*LHAGLC
Trigger: GCAGAGCCCAGCGTGGAGCAACCTTGTCCCTTCATT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGGGTCTTTCTCTGGGTaGGGAGCTCCTGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIGSFSG*GAPVGP
Trigger: AGGCCCCACAGGAGCTCCCAACCCAGAGAAAGACCC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATACACTTCAGGCTGTATaGCAGGCTTGGCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNTLQAV*QAWPVA
Trigger: GGCCACAGGCCAAGCCTGCAATACAGCCTGAAGTGT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACGACCATCGGTCCGCGTaGGTCTGTACAAGAATTAGT +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHDHRSA*VCTRIS
Trigger: ACTAATTCTTGTACAGACCAACGCGGACCGATGGTC...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAAGAAACAACAGGCTaGCTGGCTCAGAGGCACACA +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQETTG*LAQRHT
Trigger: TGTGTGCCTCTGAGCCAGCAAGCCTGTTGTTTCTTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp TACCCTCCGCCTCTCCAACCACTGCGACTTCTCAACAATGTCTCATaGAGAAGAAATCCAACATCTCACACAGGGTTGAGGGGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: YPPPLQPLRLLNNVS*RRNPTSHTGLRGWE
Trigger: CTCCCACCCCCTCAACCCTGTGTGAGATGTTGGATTTCTTCTTCATGAGACATTGTTGAGAAGTCGCAGTGGTTGGAGAGGCGGAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS TCA 90 bp TGCCTGTGCCCATTTGCCAGATTATTGCCTCTGCTGGTTGGGTCTTaGAAGGCCATTCCCTGGCGTGGAGTTCATACCAGATTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: CLCPFARLLPLLVGS*KAIPWRGVHTRLCQ
Trigger: TTGGCACAATCTGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp GAGGTTGGGTTTCATGCCTGTGCCCATTTGCCAGATTATTGCCTCTaGTGGTTGGGTCTTGAAAGGCCATTCCCTGGCGTGGAGTTCATA +
Preference number: 5 (lower is better)
Translates to: EVGFHACAHLPDYCL*WLGLERPFPGVEFI
Trigger: TATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp ATTATTGCCTCTGCTGGTTGGGTCTTGAAAGGCCATTCCCTGGCGTaGAGTTCATACCAGATTGTGCCAAGGGCAAAGACGTCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: IIASAGWVLKGHSLA*SSYQIVPRAKTSEC
Trigger: GCACTCTGACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp GTTGGGTTTCATGCCTGTGCCCATTTGCCAGATTATTGCCTCTGCTaGTTGGGTCTTGAAAGGCCATTCCCTGGCGTGGAGTTCATACCA +
Preference number: 5 (lower is better)
Translates to: VGFHACAHLPDYCLC*LGLERPFPGVEFIP
Trigger: TGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTTTTGTGTGAGGTCGTaGGAGGTAGCACATTTGGTC +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHFCVRS*EVAHLV
Trigger: GACCAAATGTGCTACCTCCAACGACCTCACACAAAA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAAGTACTTCACCAGCTaGCTCTCCAGGGTCCGGATT +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPKYFTS*LSRVRI
Trigger: AATCCGGACCCTGGAGAGCAAGCTGGTGAAGTACTT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGGCTTCCGTAGAGGGTaGTTGATGTCACACGGAACG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNGFRRG*LMSHGT
Trigger: CGTTCCGTGTGACATCAACAACCCTCTACGGAAGCC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATGGGATGCTGGCAGGTaGAAGTTCTTCTGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTWDAGR*KFFCCR
Trigger: ACGGCAGCAGAAGAACTTCAACCTGCCAGCATCCCA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTTGAGCTGGTCCTCGTaGTCCCTCTCAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACLSWSS*SLSMSI
Trigger: GATTGACATTGAGAGGGACAACGAGGACCAGCTCAA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGGGACAGTCTGGCTCTaGCTTGTCAAGGGGAAACAA +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPGTVWL*LVKGKQ
Trigger: TTGTTTCCCCTTGACAAGCAAGAGCCAGACTGTCCC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCAGATAATCCTGCTATaGCTCTGCTTGGGGACAGAT +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHQIILL*LCLGTD
Trigger: ATCTGTCCCCAAGCAGAGCAATAGCAGGATTATCTG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATATTCAGGAGGGCCCTTaGGGAAACACAGGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHIQEGP*GNTGVS
Trigger: GGAAACCCCTGTGTTTCCCAAAGGGCCCTCCTGAAT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCAGTAAGCTGGGAGTGTaGGAAAGGCAATTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFSKLGV*ERQFRR
Trigger: CCTCCTGAATTGCCTTTCCAACACTCCCAGCTTACT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAGAAGGTGCCAGTTCTaGTGGACATTTCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACRRCQF*WTFQLQ
Trigger: CTGCAGCTGAAATGTCCACAAGAACTGGCACCTTCT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTATCTTGGTCGTGTCATaGTATAGAATGAGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPILVVS*YRMSCR
Trigger: CCTGCAACTCATTCTATACAATGACACGACCAAGAT...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTTCCTCCGTGTACCTTaGATGATCAGCTGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFFLRVP*MISCRW
Trigger: CCACCTACAGCTGATCATCAAAGGTACACGGAGGAA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTAAAGTCCAGGGAGTaGGTCCAGCCTTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLKSRE*VQPSGP
Trigger: AGGCCCTGAAGGCTGGACCAACTCCCTGGACTTTAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGCCCCTCAGAAGTCATCTTGGCTTTCCAAATGGCAAGGAGGTGCGGGCAGTGACAAACTCATTGGGGTaGATATGGCACCCACAACAT +
Preference number: 5 (lower is better)
Translates to: EPLRSHLGFPNGKEVRAVTNSLG*IWHPQH
Trigger: ATGTTGTGGGTGCCATATCAACCCCAATGAGTTTGT...CACTGCCCGCACCTCCTTGCCATTTGGAAAGCCAAGATGACTTCTGAGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGGGCCTCTGGTTATTGTaGGCCTGTATTTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGGLWLL*ACIYFL
Trigger: GAGGAAATAAATACAGGCCAACAATAACCAGAGGCC...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTCAACAGTACTGAGGTaGAGAAACCCTGGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGSTVLR*RNPGLE
Trigger: TTCTAAGCCAGGGTTTCTCAACCTCAGTACTGTTGA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGGAAGCTCCAGGGATTaGATTCTAGGGGTAAAACAG +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILGSSRD*ILGVKQ
Trigger: CTGTTTTACCCCTAGAATCAAATCCCTGGAGCTTCC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGGGTCTTTCTCTGGGTaGGGAGCTCCTGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTGSFSG*GAPVGP
Trigger: AGGCCCCACAGGAGCTCCCAACCCAGAGAAAGACCC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGTTTCTATGAGGGCCTaGGTGGGGTGGGGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHVSMRA*VGWGLV
Trigger: GACCAGCCCCCACCCCACCAAGGCCCTCATAGAAAC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGTTTCTATGAGGGCCTaGGTGGGGTGGGGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTVSMRA*VGWGLV
Trigger: GACCAGCCCCCACCCCACCAAGGCCCTCATAGAAAC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGAATTCAGACCTGTCTaGGCAGTAGTGCAATGCAGT +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILEFRPV*AVVQCS
Trigger: ACTGCATTGCACTACTGCCAAGACAGGTCTGAATTC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp CCATATGAAGATAGGGACACACAGAGAGATGATGAGGGCAGGGATTaGACTGACACAGCTGCAAGCCAAGGAATGCCAATGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: PYEDRDTQRDDEGRD*TDTAASQGMPMMTR
Trigger: CCTGGTCATCATTGGCATTCCTTGGCTTGCAGCTGTGTCAGTCCAATCCCTGCCCTCATCATCTCTCTGTGTGTCCCTATCTTCATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp TTAGGGTACGATAAGGGTCAGTCCACATACTTCCTTGCCCCTCTCTaGTCATTGACCCATTCGCTTTCCTGCAGAGACTTGCTGCATCAG +
Preference number: 5 (lower is better)
Translates to: LGYDKGQSTYFLAPL*SLTHSLSCRDLLHQ
Trigger: CTGATGCAGCAAGTCTCTGCAGGAAAGCGAATGGGTCAATGACCAGAGAGGGGCAAGGAAGTATGTGGACTGACCCTTATCGTACCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCTCTTCTTCTTGGCTTaGGGCGTGTGGGCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHLFFLA*GVWASS
Trigger: GGACGAGGCCCACACGCCCAAAGCCAAGAAGAAGAG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATACGCTGCTGTGGATCTaGAGGTTCAAGGGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHTLLWI*RFKGLL
Trigger: GAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTTGTGGCACTTTAACTaGCAGTTTTTACACTTGAGG +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLWHFN*QFLHLR
Trigger: CCTCAAGTGTAAAAACTGCAAGTTAAAGTGCCACAA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCAGGGGGTCAGGGCTTaGAAAACATGGGCAAATGAC +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNQGVRA*KTWAND
Trigger: GTCATTTGCCCATGTTTTCAAAGCCCTGACCCCCTG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCCTCATATCCTGTCTCTaGGCACAAGGGAACATGACA +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACLISCL*AQGNMT
Trigger: TGTCATGTTCCCTTGTGCCAAGAGACAGGATATGAG...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGGCCCTGCTAACACTTaGATTTTGGACTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACGPANT*ILDFWH
Trigger: ATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGCC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCTTGATTGGGGCAAGCTaGGTAAGCATGACAGCAACA +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFLIGAS*VSMTAT
Trigger: TGTTGCTGTCATGCTTACCAAGCTTGCCCCAATCAA...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAGAGGTTGACCCCATCTAGGGCAGAGCCCCAGCCAACTCAACTGTCTTCTTGGGAATCCTTCATATTCTaGGTGTTAGGAAATGGGAGC +
Preference number: 5 (lower is better)
Translates to: ERLTPSRAEPQPTQLSSWESFIF*VLGNGS
Trigger: GCTCCCATTTCCTAACACCAAGAATATGAAGGATTC...CCAAGAAGACAGTTGAGTTGGCTGGGGCTCTGCCCTAGATGGGGTCAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCAGAGGTTGACCTTGTaGGAGATTCAGAAACAAGCC +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFQRLTL*EIQKQA
Trigger: GGCTTGTTTCTGAATCTCCAACAAGGTCAACCTCTG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCCAGATGTGGTGTTCTaGTTCATGGAACCACTGTCC +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPPDVVF*FMEPLS
Trigger: GGACAGTGGTTCCATGAACAAGAACACCACATCTGG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCCAAGCCATGGTATGTaGGAGAAGCCACCAACACAC +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNPSHGM*EKPPTH
Trigger: GTGTGTTGGTGGCTTCTCCAACATACCATGGCTTGG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTATATACTTTTCACATaGGCCTCCAAGCCATGGTAT +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPYILFT*ASKPWY
Trigger: ATACCATGGCTTGGAGGCCAATGTGAAAAGTATATA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACAGGGCACCCTCTGTTaGGAGATGGAGACTCCAGGG +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEQGTLC*EMETPG
Trigger: CCCTGGAGTCTCCATCTCCAAACAGAGGGTGCCCTG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CTGCGGCTCCACATTCCAGGACCCAGACTGACATTTGCTGCCTGTCACTCCCCTTTAAGTGCTCGTGGGTaGCACAAAGCTAAGAAAATT +
Preference number: 5 (lower is better)
Translates to: LRLHIPGPRLTFAACHSPLSARG*HKAKKI
Trigger: AATTTTCTTAGCTTTGTGCAACCCACGAGCACTTAA...AGGGGAGTGACAGGCAGCAAATGTCAGTCTGGGTCCTGGAATGTGGAGCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCTCAGCAACAAGACATaGGCAACAAGTGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLSNKT*ATSEKE
Trigger: CTCTTTCTCACTTGTTGCCAATGTCTTGTTGCTGAG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp CACTTGAGGCCAAAAAGCATCCCTTTCCCACAGACTGTGCACGTCTaGGACATCCAGTACTTGGTGGAAAACCTGTGCTTGATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: HLRPKSIPFPQTVHV*DIQYLVENLCLMEL
Trigger: CAACTCCATCAAGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAGGGATGCTTTTTGGCCTCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCTAAGCCCTTCCAGGTaGGAGATGCTCAAGTCTATC +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLSPSR*EMLKSI
Trigger: GATAGACTTGAGCATCTCCAACCTGGAAGGGCTTAG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGTTTGCTCTTCTTCTaGGCTTTGGGCGTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGLLFF*ALGVWA
Trigger: GGCCCACACGCCCAAAGCCAAGAAGAAGAGCAAACC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCTGTCCGGACTAACCTaGCTGGATCTCCTCGGTGGA +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLELSGLT*LDLLGG
Trigger: TCCACCGAGGAGATCCAGCAAGGTTAGTCCGGACAG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGGTCCTTGTTGATTTaGTTGGTTTTGGGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPWSLLI*LVLGSV
Trigger: GACGCTCCCCAAAACCAACAAAATCAACAAGGACCA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATTGAGCTGGTCCTCGTaGTCCCTCTCAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTLSWSS*SLSMSI
Trigger: GATTGACATTGAGAGGGACAACGAGGACCAGCTCAA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGCCATCACCTCCCGCTaGAAGGCCTTGAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHAITSR*KALSWS
Trigger: GGACCAGCTCAAGGCCTTCAAGCGGGAGGTGATGGC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATCCAGGTCGGTCGGGGTaGGTACCCTCTGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHPGRSG*VPSDAE
Trigger: CTCAGCATCAGAGGGTACCAACCCCGACCGACCTGG...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCTGCATGCCCAGCCTGCTCTCGGCATCCTTCCTACAGATACAGAACACCAGGGTGCCAAAGGCTGTGGTaGGACATTTTAGTTAATTCT +
Preference number: 5 (lower is better)
Translates to: SACPACSRHPSYRYRTPGCQRLW*DILVNS
Trigger: AGAATTAACTAAAATGTCCAACCACAGCCTTTGGCA...CCCTGGTGTTCTGTATCTGTAGGAAGGATGCCGAGAGCAGGCTGGGCATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCTTTGGGTTTCCAGCTaGGCTCTGGGGATGGGGACA +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLELWVSS*ALGMGT
Trigger: TGTCCCCATCCCCAGAGCCAAGCTGGAAACCCAAAG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTTAAAGTCCAGGGAGTaGGTCCAGCCTTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFLKSRE*VQPSGP
Trigger: AGGCCCTGAAGGCTGGACCAACTCCCTGGACTTTAA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACAGAGTCCATCTCCTCCAGCTCAGTCCTCAGTGGAAGGAGGACAGCCATTCTCGCTAACACTTTGATTTaGGACTTCTGGCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: TESISSSSVLSGRRTAILANTLI*DFWHPD
Trigger: ATCTGGATGCCAGAAGTCCAAAATCAAAGTGTTAGC...GAGAATGGCTGTCCTCCTTCCACTGAGGACTGAGCTGGAGGAGATGGACTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCACAAACTCATTGGGGTaGATATGGCACCCACAACAT +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFTNSLG*IWHPQH
Trigger: ATGTTGTGGGTGCCATATCAACCCCAATGAGTTTGT...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTGCTGGGTCTGCAATTaGGAGGCTGGTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFCWVCN*EAGFCP
Trigger: GGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCCAGATGTGGTGTTCTaGTTCATGGAACCACTGTCC +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHPDVVF*FMEPLS
Trigger: GGACAGTGGTTCCATGAACAAGAACACCACATCTGG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGGTGGAAACTTGATTTaGAGCCTTCCATTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACGGNLI*SLPFRE
Trigger: TTCCCTGAATGGAAGGCTCAAAATCAAGTTTCCACC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTATCTGGGTGGAAACTaGATTTTGAGCCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHYLGGN*ILSLPF
Trigger: GAATGGAAGGCTCAAAATCAAGTTTCCACCCAGATA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACATATTTGTGGTTGACTaGCTTCTTGTCTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHIFVVD*LLVSLP
Trigger: GGGAAGAGAGACAAGAAGCAAGTCAACCACAAATAT...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGGCAGGATGCTGGATTaGAATCCTAGTCGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTGRMLD*NPSRVA
Trigger: GGCCACGCGACTAGGATTCAAATCCAGCATCCTGCC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTCCAGACTGTCTATGTaGTTGCTTCATTGCTACCAG +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACSRLSM*LLHCYQ
Trigger: CTGGTAGCAATGAAGCAACAACATAGACAGTCTGGA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCCAGAACTGCCACATCTaGTCCAGACTGTCTATGTTG +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPQNCHI*SRLSML
Trigger: CAACATAGACAGTCTGGACAAGATGTGGCAGTTCTG...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTCCAAGATCTGGTCTTTaGCAGTGCCCGACTCGTCCT +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFPRSGL*QCPTRP
Trigger: AGGACGAGTCGGGCACTGCAAAAGACCAGATCTTGG...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTGTGTTGGGGAGAGGTaGACCCCATCTAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHCVGER*TPSRAE
Trigger: CTCTGCCCTAGATGGGGTCAACCTCTCCCCAACACA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTACTGTCCAGATAGCTTaGAAGGGGCAGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFTVQIA*KGQGVQ
Trigger: CTGCACACCCTGCCCCTTCAAAGCTATCTGGACAGT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATTTATGCATCACACAGTaGGGCAGAAGCCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLCITQ*GRSLTK
Trigger: CTTGGTCAGGCTTCTGCCCAACTGTGTGATGCATAA...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAATGAAGGGACAAGGTaGCTCCACGCTGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKENEGTR*LHAGLC
Trigger: GCAGAGCCCAGCGTGGAGCAACCTTGTCCCTTCATT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGACCATCGGTCCGCGTaGGTCTGTACAAGAATTAGT +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNDHRSA*VCTRIS
Trigger: ACTAATTCTTGTACAGACCAACGCGGACCGATGGTC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 90 bp AGGTTGGAGATGCTCAAGTCTATCATGTTTTGGACCAGTTCGCACTaGTGTAAGGCTTTTTGCAAACTCAGAGGCTGCTGCTCCTCGCTT +
Preference number: 5 (lower is better)
Translates to: RLEMLKSIMFWTSSH*CKAFCKLRGCCSSL
Trigger: AAGCGAGGAGCAGCAGCCTCTGAGTTTGCAAAAAGCCTTACAGCAGTGCGAACTGGTCCAAAACATGATAGACTTGAGCATCTCCAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS CCA 90 bp GTCCTAAGCCCTTCCAGGTTGGAGATGCTCAAGTCTATCATGTTTTaGACCAGTTCGCACTGCTGTAAGGCTTTTTGCAAACTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VLSPSRLEMLKSIMF*TSSHCCKAFCKLRG
Trigger: GCCTCTGAGTTTGCAAAAAGCCTTACAGCAGTGCGAACTGGTCCAAAACATGATAGACTTGAGCATCTCCAACCTGGAAGGGCTTAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACAAGTCTATCATGTTTaGGACCAGTTCGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTQVYHV*DQFALL
Trigger: CAGCAGTGCGAACTGGTCCAAAACATGATAGACTTG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATCAAGTCTATCATGTTTaGGACCAGTTCGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHQVYHV*DQFALL
Trigger: CAGCAGTGCGAACTGGTCCAAAACATGATAGACTTG...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTTGTGGCACTTTAACTaGCAGTTTTTACACTTGAGG +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLWHFN*QFLHLR
Trigger: CCTCAAGTGTAAAAACTGCAAGTTAAAGTGCCACAA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATGGGATGTGGTCCTTGTaGATTTTGTTGGTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNGMWSL*ILLVLG
Trigger: CCCCAAAACCAACAAAATCAACAAGGACCACATCCC...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAAGACGTCAGAGTGCTaGGAGAAGGGGAGCTTATCC +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIKTSEC*EKGSLS
Trigger: GGATAAGCTCCCCTTCTCCAAGCACTCTGACGTCTT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAGGAGTGCCCCGTCATaGGGACAGTCTGGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPRSAPS*GQSGSC
Trigger: GCAAGAGCCAGACTGTCCCAATGACGGGGCACTCCT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAACAAACATCCTCCCTTaGTGCTCCCCCAACAGGACT +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFITNILP*CSPNRT
Trigger: AGTCCTGTTGGGGGAGCACAAAGGGAGGATGTTTGT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCTCATATCCTGTCTCTaGGCACAAGGGAACATGACA +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNLISCL*AQGNMT
Trigger: TGTCATGTTCCCTTGTGCCAAGAGACAGGATATGAG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATACATGTAAAAACCATTaGGCAGGCTGGGTATGGCCT +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHTCKNH*AGWVWP
Trigger: AGGCCATACCCAGCCTGCCAAATGGTTTTTACATGT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAACCCTGCTGACACCTaGATCTTGGGACTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTNPADT*ILGLPA
Trigger: GGCTGGAAGTCCCAAGATCAAGGTGTCAGCAGGGTT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGCTAACACTTTGATTTaGGACTTCTGGCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACANTLI*DFWHPD
Trigger: ATCTGGATGCCAGAAGTCCAAAATCAAAGTGTTAGC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGAATCCTTCATATTCTaGGTGTTAGGAAATGGGAGC +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFESFIF*VLGNGS
Trigger: GCTCCCATTTCCTAACACCAAGAATATGAAGGATTC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCGTCTATGGGACATGCTaGGGAAACAAGGTCTTATTT +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACVYGTC*GNKVLF
Trigger: AAATAAGACCTTGTTTCCCAAGCATGTCCCATAGAC...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTCTCATTCACAGAGGTaGACCTTGTTGGAGATTCAG +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPSHSQR*TLLEIQ
Trigger: CTGAATCTCCAACAAGGTCAACCTCTGTGAATGAGA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGACCTCTCTTCTACCTaGTTCATCCTGTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHDLSST*FILSPT
Trigger: GGTGGGCGACAGGATGAACAAGGTAGAAGAGAGGTC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACTTCTCCCATGGAAGGTaGCAGATGGCAGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHFSHGR*QMAGCW
Trigger: CCAGCATCCTGCCATCTGCAACCTTCCATGGGAGAA...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACTTAAGTGCTCGTGGGTaGCACAAAGCTAAGAAAATT +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLSARG*HKAKKI
Trigger: AATTTTCTTAGCTTTGTGCAACCCACGAGCACTTAA...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGGGTGGGGGCTGGTCTaGCCAGAGACTCTCTCACAT +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHGWGLV*PETLSH
Trigger: ATGTGAGAGAGTCTCTGGCAAGACCAGCCCCCACCC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTTCCTCATCCATCGCTaGCTCTGCAACCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHFLIHR*LCNPLP
Trigger: GGGAAGGGGGTTGCAGAGCAAGCGATGGATGAGGAA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGTCCGGATTTCTTTTaGTGTGAGGTCGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGPDFF*CEVVGG
Trigger: ACCTCCAACGACCTCACACAAAAAGAAATCCGGACC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTATGGTCCAGTCTTGTTaGGAAAGGTTGCCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFMVQSC*ERLPPD
Trigger: GTCAGGAGGCAACCTTTCCAAACAAGACTGGACCAT...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAACTGGATGGTCCAGTCTaGTTTGGAAAGGTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKELDGPV*FGKVAS
Trigger: GGAGGCAACCTTTCCAAACAAGACTGGACCATCCAG...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGCACTGACAGTGTGTTaGCAGAGAAGTTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEALTVC*QRSWPQ
Trigger: CTGAGGCCAACTTCTCTGCAAACACACTGTCAGTGC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATACATCCAAAACGATTTaGGCATCCCTCACAACGGAA +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHTSKTI*ASLTTE
Trigger: TTCCGTTGTGAGGGATGCCAAAATCGTTTTGGATGT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCGCAATCTGCCTGGTTTaGTTGACATCCAAAACGATT +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPAICLV*LTSKTI
Trigger: AATCGTTTTGGATGTCAACAAAACCAGGCAGATTGC...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATGCCCTTCACAATTTCTaGAGCAATCTGCCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHALHNF*SNLPGF
Trigger: AAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGGC...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGAGTTCATACCAGATaGTGCCAAGGGCAAAGACGT +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGVHTR*CQGQRR
Trigger: ACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCTTGGCTCAGTAGCCTaGACTAAGCTGCCACTCGGC +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPLGSVA*TKLPLG
Trigger: GCCGAGTGGCAGCTTAGTCAAGGCTACTGAGCCAAG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCAGGCAGGGAAATCTTTaGCAAACGTGTTATCATAGG +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPRQGNL*QTCYHR
Trigger: CCTATGATAACACGTTTGCAAAAGATTTCCCTGCCT...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCTGCCAAAGGCTGTGGTaGGACATTTTAGTTAATTCT +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACCQRLW*DILVNS
Trigger: AGAATTAACTAAAATGTCCAACCACAGCCTTTGGCA...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGACACCTTGATCTaGGGACTTCCAGCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEADTLI*GLPASR
Trigger: TCTTGAGGCTGGAAGTCCCAAGATCAAGGTGTCAGC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAGAATGAGACTTCATTaGGAGAGAGGGTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNRMRLH*ERGSLQ
Trigger: CTGCAAAGACCCTCTCTCCAAATGAAGTCTCATTCT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAGTGTCACCAACTGCTTaGGATAGGGTCATGAGGCAC +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEVSPTA*DRVMRH
Trigger: GTGCCTCATGACCCTATCCAAAGCAGTTGGTGACAC...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTTCAAAGTGATTCCCTaGCAGGTGTGTGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFFKVIP*QVCAGE
Trigger: CTCACCTGCACACACCTGCAAGGGAATCACTTTGAA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATGCCTGTCACTCCCCTaGGAGTTCAAAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKECLSLP*EFKVIP
Trigger: GGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTGCCTGTCACTCCCCTaGGAGTTCAAAGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLECLSLP*EFKVIP
Trigger: GGGAATCACTTTGAACTCCAAGGGGAGTGACAGGCA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGTTCAGGGTGGATaGTTACTCTGCCTCCTAGAC +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEAVQGG*LLCLLD
Trigger: GTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATATTTCCAATGCATGCTaGTCCCAGGACCCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHISNAC*SQDPFN
Trigger: ATTGAAAGGGTCCTGGGACAAGCATGCATTGGAAAT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGATTTGACCCCTCCATaGGAAGACACCATCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTDLTPP*EDTISQ
Trigger: CTGGCTGATGGTGTCTTCCAATGGAGGGGTCAAATC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATGGTTGACTTGCTTCTaGTCTCTCTTCCCCATTGGG +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIWLTCF*SLFPIG
Trigger: CCCAATGGGGAAGAGAGACAAGAAGCAAGTCAACCA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATTTGGATGTCACACTTaGGATGTCAACTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTFGCHT*DVNWRL
Trigger: AAGCCTCCAGTTGACATCCAAAGTGTGACATCCAAA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATTTTGGATGTCACACTTaGGATGTCAACTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHFGCHT*DVNWRL
Trigger: AAGCCTCCAGTTGACATCCAAAGTGTGACATCCAAA...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCAATACATTACATTTGTaGTCCAGGACGCACTTAAGC +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACNTLHL*SRTHLS
Trigger: GCTTAAGTGCGTCCTGGACAACAAATGTAATGTATT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCAGACATCTTCCCCCACAGGACACCAAGGCTAACAGTAGGAACCAGAGCATGCACCAATACATTACATTaGTTGTCCAGGACGCACTTA +
Preference number: 5 (lower is better)
Translates to: SDIFPHRTPRLTVGTRACTNTLH*LSRTHL
Trigger: TAAGTGCGTCCTGGACAACAAATGTAATGTATTGGT...GCATGCTCTGGTTCCTACTGTTAGCCTTGGTGTCCTGTGGGGGAAGATGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTCCCAAAATCAGGCTTaGGGGAAAGCAGGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLESQNQA*GKAGKG
Trigger: GCCTTTCCCTGCTTTCCCCAAAGCCTGATTTTGGGA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCAGGGCACCCTCTGTTaGGAGATGGAGACTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSQGTLC*EMETPG
Trigger: CCCTGGAGTCTCCATCTCCAAACAGAGGGTGCCCTG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TCGGCTCTGTACCCTCCTCTTAGCTTCCCAGATGGTACAGCTGGAACCTACCACCTCAAGAAATGCAAATaGAGTCAAGTTGAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SALYPPLSFPDGTAGTYHLKKCK*SQVEAD
Trigger: ATCTGCTTCAACTTGACTCAATTTGCATTTCTTGAG...GTGGTAGGTTCCAGCTGTACCATCTGGGAAGCTAAGAGGAGGGTACAGAGCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp AGAAGAGAAGAATGTCCGAGATTTCTTTTCCCATGCCAATCTGGCTaGGGTTGGGTTTCATGCCTGTGCCCATTTGCCAGATTATTGCCT +
Preference number: 5 (lower is better)
Translates to: RREECPRFLFPCQSG*GWVSCLCPFARLLP
Trigger: AGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGACATTCTTCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 90 bp CAGCAGAAGAGAAGAATGTCCGAGATTTCTTTTCCCATGCCAATCTaGCTGAGGTTGGGTTTCATGCCTGTGCCCATTTGCCAGATTATT +
Preference number: 5 (lower is better)
Translates to: QQKRRMSEISFPMPI*LRLGFMPVPICQII
Trigger: AATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGACATTCTTCTCTTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGGCATGGTCCACGGTTaGGAGTGCTTTAGCGCGTTC +
Preference number: 5 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSGMVHG*ECFSAF
Trigger: GAACGCGCTAAAGCACTCCAAACCGTGGACCATGCC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTTTTGTGTGAGGTCGTaGGAGGTAGCACATTTGGTC +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFFCVRS*EVAHLV
Trigger: GACCAAATGTGCTACCTCCAACGACCTCACACAAAA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATCTTTGGTGCATTTGTaGTGGCACTTTAACTTGCAG +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTSLVHL*WHFNLQ
Trigger: CTGCAAGTTAAAGTGCCACAACAAATGCACCAAAGA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATACAGGGATGTGGTCCTaGTTGATTTTGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHTGMWS*LILLVL
Trigger: CAAAACCAACAAAATCAACAAGGACCACATCCCTGT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATACAGGGATGTGGTCCTaGTTGATTTTGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNTGMWS*LILLVL
Trigger: CAAAACCAACAAAATCAACAAGGACCACATCCCTGT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCTGCTGGTTGGGTCTaGAAAGGCCATTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSAGWV*KGHSLA
Trigger: CGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTACCATTCTTCCCGGTTaGGAAGCAGGTTTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPTILPG*EAGLAP
Trigger: GGGGGCCAAACCTGCTTCCAAACCGGGAAGAATGGT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGTAAGCTGGGAGTGTaGGAAAGGCAATTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSKLGV*ERQFRR
Trigger: CCTCCTGAATTGCCTTTCCAACACTCCCAGCTTACT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCTGGGACACAGAGTGTaGTGTTGGGATGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPLGHRV*CWDGEV
Trigger: CACCTCCCCATCCCAACACAACACTCTGTGTCCCAG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAAAGAGAAGTGAGTGGTaGGGTTTCAGGCACTCAGTA +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIKRSEW*GFRHSV
Trigger: TACTGAGTGCCTGAAACCCAACCACTCACTTCTCTT...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGGTGGGGAGTACAATCTATGATATTCCTTGATAGGTTAGGACCGCAGAGGCCCTGTATCCTGGAAGAGTaGGGTGAAATTTATGTGCAA +
Preference number: 5 (lower is better)
Translates to: GWGVQSMIFLDRLGPQRPCILEE*GEIYVQ
Trigger: TTGCACATAAATTTCACCCAACTCTTCCAGGATACA...GGGCCTCTGCGGTCCTAACCTATCAAGGAATATCATAGATTGTACTCCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTTTCGGGACTCAAGATaGAGAACCAGTGTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFFRDSR*RTSVGK
Trigger: TTTCCCCACACTGGTTCTCAATCTTGAGTCCCGAAA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATTCAAAGTGATTCCCTaGCAGGTGTGTGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKEFKVIP*QVCAGE
Trigger: CTCACCTGCACACACCTGCAAGGGAATCACTTTGAA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGCCAGTACATTGACATaGCCTCCTTCAGTACCAGGT +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTASTLT*PPSVPG
Trigger: ACCTGGTACTGAAGGAGGCAATGTCAATGTACTGGC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGCCAGTACATTGACATaGCCTCCTTCAGTACCAGGT +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEASTLT*PPSVPG
Trigger: ACCTGGTACTGAAGGAGGCAATGTCAATGTACTGGC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAATCCCAATGACTTGGTaGAAGATGAAAACTCAGGTG +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTIPMTW*KMKTQV
Trigger: CACCTGAGTTTTCATCTTCAACCAAGTCATTGGGAT...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATCACCATCCCAATGACTaGGTTGAAGATGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNHHPND*VEDENS
Trigger: TGAGTTTTCATCTTCAACCAAGTCATTGGGATGGTG...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACACCATCCCAATGACTaGGTTGAAGATGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTHHPND*VEDENS
Trigger: TGAGTTTTCATCTTCAACCAAGTCATTGGGATGGTG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACATATCTGGGTGGAAACTaGATTTTGAGCCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTYLGGN*ILSLPF
Trigger: GAATGGAAGGCTCAAAATCAAGTTTCCACCCAGATA...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTGGAAGCTCCAGGGATTaGATTCTAGGGGTAAAACAG +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFGSSRD*ILGVKQ
Trigger: CTGTTTTACCCCTAGAATCAAATCCCTGGAGCTTCC...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATACTGTCCAGATAGCTTaGAAGGGGCAGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHTVQIA*KGQGVQ
Trigger: CTGCACACCCTGCCCCTTCAAAGCTATCTGGACAGT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCCTCAAGAAATGCAAATaGAGTCAAGTTGAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFLKKCK*SQVEAD
Trigger: ATCTGCTTCAACTTGACTCAATTTGCATTTCTTGAG...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATTGTTACTCTGCCTCCTAGACATCCTGGGCCACCTGACTCAATGGGTCGCTTCGATGCTGAGAAAGTGTaGATGAAATCATTATCCACA +
Preference number: 5 (lower is better)
Translates to: IVTLPPRHPGPPDSMGRFDAEKV*MKSLST
Trigger: TGTGGATAATGATTTCATCAACACTTTCTCAGCATC...GAAGCGACCCATTGAGTCAGGTGGCCCAGGATGTCTAGGAGGCAGAGTAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp TCATCATGGACCTCTTCATTCTCCGACGTTGGCTCCACTTCAATTTaGAGTAATGGATTTCCTTCCAAGATTGGATTCGAGGTCACCGGA +
Preference number: 5 (lower is better)
Translates to: SSWTSSFSDVGSTSI*SNGFPSKIGFEVTG
Trigger: TCCGGTGACCTCGAATCCAATCTTGGAAGGAAATCCATTACTTCAAATTGAAGTGGAGCCAACGTCGGAGAATGAAGAGGTCCATGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTAAGGCTACCTTCTTTTaGCAGGACAGCTGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPKATFF*QDSCRL
Trigger: CAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAATCTTGTTTGGAAAGGTaGCCTCCTGACATGTGGACA +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKESCLER*PPDMWT
Trigger: TGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGA...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATCTTGTTTGGAAAGGTaGCCTCCTGACATGTGGACA +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSCLER*PPDMWT
Trigger: TGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATATTGAGGTTCAAGGGTTaGCTCTTCTTCTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFILRFKG*LFFLAL
Trigger: CAAAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAA...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATGGTCCTTGTTGATTTaGTTGGTTTTGGGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTWSLLI*LVLGSV
Trigger: GACGCTCCCCAAAACCAACAAAATCAACAAGGACCA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTGGGATGCTGGCAGGTaGAAGTTCTTCTGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSWDAGR*KFFCCR
Trigger: ACGGCAGCAGAAGAACTTCAACCTGCCAGCATCCCA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCATGCCTGTGCCCATTaGCCAGATTATTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPHACAH*PDYCLC
Trigger: GCAGAGGCAATAATCTGGCAAATGGGCACAGGCATG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATAGATCAGGTAGGGTTTTaGAAGTTCCAGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIDQVGF*KFQFLS
Trigger: AGAGAGGAACTGGAACTTCAAAAACCCTACCTGATC...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCCTTCAGGGCCTGAATaGCCTCCATATCACACAGGC +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSPSGPE*PPYHTG
Trigger: GCCTGTGTGATATGGAGGCAATTCAGGCCCTGAAGG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AGAATGGGTATGGATTGCAGGGCCTCGAGAAGGGAGTCTGGGATTTGGGTTAATAGGAATAAATTCGTGTaGTTTAAGCCACTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RMGMDCRASRRESGIWVNRNKFV*FKPLSV
Trigger: CACACTGAGTGGCTTAAACAACACGAATTTATTCCT...ATTAACCCAAATCCCAGACTCCCTTCTCGAGGCCCTGCAATCCATACCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGCTGACACCTTGATCTaGGGACTTCCAGCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHADTLI*GLPASR
Trigger: TCTTGAGGCTGGAAGTCCCAAGATCAAGGTGTCAGC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATTTCCTGGTTCCAAGTaGCCAATAAGTCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTFPGSK*PISLRG
Trigger: GCCTCTGAGACTTATTGGCAACTTGGAACCAGGAAA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACCAGAGGTTGACCTTGTaGGAGATTCAGAAACAAGCC +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHQRLTL*EIQKQA
Trigger: GGCTTGTTTCTGAATCTCCAACAAGGTCAACCTCTG...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGAAACCAAAGAGCAATaGGAGTCAGGCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTETKEQ*ESGSFS
Trigger: GGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGACCTCTCTTCTACCTaGTTCATCCTGTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPDLSST*FILSPT
Trigger: GGTGGGCGACAGGATGAACAAGGTAGAAGAGAGGTC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CCCAGCCAACTCAACTGTCTTCTTGGAAGGTGTCCCAATTCCCAAAGCAATTTTTCAACAGTACTGAGGTaGAGAAACCCTGGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: PSQLNCLLGRCPNSQSNFSTVLR*RNPGLE
Trigger: TTCTAAGCCAGGGTTTCTCAACCTCAGTACTGTTGA...AAAATTGCTTTGGGAATTGGGACACCTTCCAAGAAGACAGTTGAGTTGGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TGCTCTGTGAATGAGGGCTGTTCAGGGTGGATTGTTACTCTGCCTCCTAGACATAATACATTACATTTGTaGTCCAGGACGCACTTAAGC +
Preference number: 5 (lower is better)
Translates to: CSVNEGCSGWIVTLPPRHNTLHL*SRTHLS
Trigger: GCTTAAGTGCGTCCTGGACAACAAATGTAATGTATT...ATGTCTAGGAGGCAGAGTAACAATCCACCCTGAACAGCCCTCATTCACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACACAGGATTTTAGCCACTaGCAGTTACCCTCAATAAAT +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTQDFSH*QLPSIN
Trigger: ATTTATTGAGGGTAACTGCAAGTGGCTAAAATCCTG...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCATGGTCCAGTCTTGTTaGGAAAGGTTGCCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPMVQSC*ERLPPD
Trigger: GTCAGGAGGCAACCTTTCCAAACAAGACTGGACCAT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTTCCGTAGAGGGTTGTaGATGTCACACGGAACGGAC +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPFRRGL*MSHGTD
Trigger: GTCCGTTCCGTGTGACATCAACAACCCTCTACGGAA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACACTTCATTCTCCGACGTaGGCTCCACTTCAATTTGAA +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTLHSPT*APLQFE
Trigger: TTCAAATTGAAGTGGAGCCAACGTCGGAGAATGAAG...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAACATCCAAAACGATTTaGGCATCCCTCACAACGGAA +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTTSKTI*ASLTTE
Trigger: TTCCGTTGTGAGGGATGCCAAAATCGTTTTGGATGT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGGTAGGTCTCTCTTCTaGTTCAAAGGCCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHGRSLF*FKGPAE
Trigger: TTCTGCTGGGCCTTTGAACAAGAAGAGAGACCTACC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAGAAGGTGCCAGTTCTaGTGGACATTTCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPRRCQF*WTFQLQ
Trigger: CTGCAGCTGAAATGTCCACAAGAACTGGCACCTTCT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTGGAAAAATCAGCTGTaGGAGATCATGCTAGGCCTT +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEWKNQL*EIMLGL
Trigger: AAGGCCTAGCATGATCTCCAACAGCTGATTTTTCCA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATGGAAAAATCAGCTGTaGGAGATCATGCTAGGCCTT +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTWKNQL*EIMLGL
Trigger: AAGGCCTAGCATGATCTCCAACAGCTGATTTTTCCA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAGAATGAGACTTCATTaGGAGAGAGGGTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKERMRLH*ERGSLQ
Trigger: CTGCAAAGACCCTCTCTCCAAATGAAGTCTCATTCT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCGTGTCACCAACTGCTTaGGATAGGGTCATGAGGCAC +
Preference number: 5 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSVSPTA*DRVMRH
Trigger: GTGCCTCATGACCCTATCCAAAGCAGTTGGTGACAC...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGTCCCTGTACCACAGTaGCCCCATTGGAACGAGAAT +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSVPVPQ*PHWNEN
Trigger: ATTCTCGTTCCAATGGGGCAACTGTGGTACAGGGAC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCAAGCCTGGGAAAGCTaGGGAAGAACAGCCTCCTAT +
Preference number: 5 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSQAWES*GRTASY
Trigger: ATAGGAGGCTGTTCTTCCCAAGCTTTCCCAGGCTTG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGGTGGAAACTTGATTTaGAGCCTTCCATTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHGGNLI*SLPFRE
Trigger: TTCCCTGAATGGAAGGCTCAAAATCAAGTTTCCACC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGGGCCTCTGGTTATTGTaGGCCTGTATTTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEGLWLL*ACIYFL
Trigger: GAGGAAATAAATACAGGCCAACAATAACCAGAGGCC...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGGCTAACAGTAGGAACCAGAGCATGCTGGGGAAAGAAGTCAAGGTCTCCACAGATGCTGAGAAAGTGTaGATGAAATCATTATCCACA +
Preference number: 5 (lower is better)
Translates to: KANSRNQSMLGKEVKVSTDAEKV*MKSLST
Trigger: TGTGGATAATGATTTCATCAACACTTTCTCAGCATC...TGTGGAGACCTTGACTTCTTTCCCCAGCATGCTCTGGTTCCTACTGTTAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTCAAGAAACAACAGGCTaGCTGGCTCAGAGGCACACA +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPQETTG*LAQRHT
Trigger: TGTGTGCCTCTGAGCCAGCAAGCCTGTTGTTTCTTG...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCCTAAGCCCTTCCAGGTaGGAGATGCTCAAGTCTATC +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLSPSR*EMLKSI
Trigger: GATAGACTTGAGCATCTCCAACCTGGAAGGGCTTAG...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGATTTCCTTCCAAGATaGGATTCGAGGTCACCGGAT +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPDFLPR*DSRSPD
Trigger: ATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCGGAGTTCATACCAGATaGTGCCAAGGGCAAAGACGT +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSGVHTR*CQGQRR
Trigger: ACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCC...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACAGGCAGGGAAATCTTTaGCAAACGTGTTATCATAGG +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHRQGNL*QTCYHR
Trigger: CCTATGATAACACGTTTGCAAAAGATTTCCCTGCCT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCAAGAGAAGTGAGTGGTaGGGTTTCAGGCACTCAGTA +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPKRSEW*GFRHSV
Trigger: TACTGAGTGCCTGAAACCCAACCACTCACTTCTCTT...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAGAAACCAAAGAGCAATTGGAGTCAGGCTCCTTTTCCTGCCCTTTATACATGTATATGACGGTTaGCTAAAAGCAAGACTGACT +
Preference number: 5 (lower is better)
Translates to: QGRNQRAIGVRLLFLPFIHVYDG*LKARLT
Trigger: AGTCAGTCTTGCTTTTAGCAAACCGTCATATACATG...TATAAAGGGCAGGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTCTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGGCCCTGCTAACACTTaGATTTTGGACTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPGPANT*ILDFWH
Trigger: ATGCCAGAAGTCCAAAATCAAAGTGTTAGCAGGGCC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAAGAGGGTGTTATAAGTaGTGGTGTCCCCAACAAAAA +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTRGCYK*WCPQQK
Trigger: TTTTTGTTGGGGACACCACAACTTATAACACCCTCT...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTTTCCTGGTTCCAAGTaGCCAATAAGTCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHFPGSK*PISLRG
Trigger: GCCTCTGAGACTTATTGGCAACTTGGAACCAGGAAA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACATCACAGAGGTTGACCTaGTTGGAGATTCAGAAACAA +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTSQRLT*LEIQKQ
Trigger: TTGTTTCTGAATCTCCAACAAGGTCAACCTCTGTGA...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTCACAGAGGTTGACCTaGTTGGAGATTCAGAAACAA +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLESQRLT*LEIQKQ
Trigger: TTGTTTCTGAATCTCCAACAAGGTCAACCTCTGTGA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCGAAACCAAAGAGCAATaGGAGTCAGGCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPETKEQ*ESGSFS
Trigger: GGAAAAGGAGCCTGACTCCAATTGCTCTTTGGTTTC...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ATATTCTTGGTGTTAGGAAATGGGAGCTGCATGATCCCAATGAGTGGGAAGGAAAGAAGAAAAGCCACATaGATGAAGCACCTACTGTGT +
Preference number: 5 (lower is better)
Translates to: IFLVLGNGSCMIPMSGKERRKAT*MKHLLC
Trigger: ACACAGTAGGTGCTTCATCAATGTGGCTTTTCTTCT...TTCCTTCCCACTCATTGGGATCATGCAGCTCCCATTTCCTAACACCAAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGAGAAGAAAAGCCACATaGATGAAGCACCTACTGTGT +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLERRKAT*MKHLLC
Trigger: ACACAGTAGGTGCTTCATCAATGTGGCTTTTCTTCT...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGATTTCCTTCCAAGATaGGATTCGAGGTCACCGGAT +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPDFLPR*DSRSPD
Trigger: ATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCCTTCATTCTCCGACGTaGGCTCCACTTCAATTTGAA +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPLHSPT*APLQFE
Trigger: TTCAAATTGAAGTGGAGCCAACGTCGGAGAATGAAG...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGCCCTTCACAATTTCTaGAGCAATCTGCCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHALHNF*SNLPGF
Trigger: AAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGGC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp TTTTTAAAATGCTGGGTCTGCAATTTGGAGGCTGGTTTCTGTCCCTGTACCACAGCAAACACACAAATCTaGGTCGTGTCATTGTATAGA +
Preference number: 5 (lower is better)
Translates to: FLKCWVCNLEAGFCPCTTANTQI*VVSLYR
Trigger: TCTATACAATGACACGACCAAGATTTGTGTGTTTGC...TGTGGTACAGGGACAGAAACCAGCCTCCAAATTGCAGACCCAGCATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACGCAAACACACAAATCTaGGTCGTGTCATTGTATAGA +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHANTQI*VVSLYR
Trigger: TCTATACAATGACACGACCAAGATTTGTGTGTTTGC...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTATCTTGTGGGGAGAGTaGAGGAAGCTGCTTAACATC +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPILWGE*RKLLNI
Trigger: GATGTTAAGCAGCTTCCTCAACTCTCCCCACAAGAT...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTTTACAAACCTCCTCAAGAAAGAAAAGCCCTTGCAGCTCTCCTGCACACACCAATACATTACATTaGTTGTCCAGGACGCACTTA +
Preference number: 5 (lower is better)
Translates to: EILQTSSRKKSPCSSPAHTNTLH*LSRTHL
Trigger: TAAGTGCGTCCTGGACAACAAATGTAATGTATTGGT...GTGTGCAGGAGAGCTGCAAGGGCTTTTCTTTCTTGAGGAGGTTTGTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGCAGGATTTTAGCCACTaGCAGTTACCCTCAATAAAT +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEQDFSH*QLPSIN
Trigger: ATTTATTGAGGGTAACTGCAAGTGGCTAAAATCCTG...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGAATTCAGACCTGTCTaGGCAGTAGTGCAATGCAGT +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPEFRPV*AVVQCS
Trigger: ACTGCATTGCACTACTGCCAAGACAGGTCTGAATTC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTTACACACCGGCTCCTaGAAGGACAAAATTATATAT +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLELHTGS*KDKIIY
Trigger: ATATATAATTTTGTCCTTCAAGGAGCCGGTGTGTAA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATGCAATCTGCCTGGTTTaGTTGACATCCAAAACGATT +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHAICLV*LTSKTI
Trigger: AATCGTTTTGGATGTCAACAAAACCAGGCAGATTGC...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTGATCAGGTAGGGTTTTaGAAGTTCCAGTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPDQVGF*KFQFLS
Trigger: AGAGAGGAACTGGAACTTCAAAAACCCTACCTGATC...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATAGAGGGTGTTATAAGTaGTGGTGTCCCCAACAAAAA +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHRGCYK*WCPQQK
Trigger: TTTTTGTTGGGGACACCACAACTTATAACACCCTCT...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTCTCATTCACAGAGGTaGACCTTGTTGGAGATTCAG +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPSHSQR*TLLEIQ
Trigger: CTGAATCTCCAACAAGGTCAACCTCTGTGAATGAGA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GGAATGGATGAGCCCAAAGACTCGTTTTTAAAATGCTGGGTCTGCAATTTGGAGTTTTCATCTCTACAATaGTGCAACTTTCTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: GMDEPKDSFLKCWVCNLEFSSLQ*CNFLLS
Trigger: ACTGAGGAGAAAGTTGCACAATTGTAGAGATGAAAA...CTCCAAATTGCAGACCCAGCATTTTAAAAACGAGTCTTTGGGCTCATCCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACATATTTGTACTCCTTGGACCAGATCTTTATCCTTCTAGATCTTAGAGGTCCTTGTCTGGAGATGGTTTaGGATGTCACACTTTGGATG +
Preference number: 5 (lower is better)
Translates to: TYLYSLDQIFILLDLRGPCLEMV*DVTLWM
Trigger: CATCCAAAGTGTGACATCCAAAACCATCTCCAGACA...AGGACCTCTAAGATCTAGAAGGATAAAGATCTGGTCCAAGGAGTACAAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTCCAGACTGTCTATGTaGTTGCTTCATTGCTACCAG +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSSRLSM*LLHCYQ
Trigger: CTGGTAGCAATGAAGCAACAACATAGACAGTCTGGA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 90 bp GAGCTGATAATGCTTACCTTGTGGCTGTTCCAAAGATTAAATAAGTaGTATAAGGGTAATTGCTTAGGGTACGATAAGGGTCAGTCCACA +
Preference number: 5 (lower is better)
Translates to: ELIMLTLWLFQRLNK*YKGNCLGYDKGQST
Trigger: TGTGGACTGACCCTTATCGTACCCTAAGCAATTACCCTTATATCACTTATTTAATCTTTGGAACAGCCACAAGGTAAGCATTATCAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTTGCAGTTTTTACACTaGAGGCCAAAAAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSLQFLH*RPKSIP
Trigger: AGGGATGCTTTTTGGCCTCAAGTGTAAAAACTGCAA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCTCTTTGGTGCATTTGTaGTGGCACTTTAACTTGCAG +
Preference number: 5 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSSLVHL*WHFNLQ
Trigger: CTGCAAGTTAAAGTGCCACAACAAATGCACCAAAGA...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp GAAATTAGTTTCATTTTACCTAAGCATTTCCAATGCATGCTTGTCCCAGGACCCTGTATCCTGGAAGAGTaGGGTGAAATTTATGTGCAA +
Preference number: 5 (lower is better)
Translates to: EISFILPKHFQCMLVPGPCILEE*GEIYVQ
Trigger: TTGCACATAAATTTCACCCAACTCTTCCAGGATACA...GGGTCCTGGGACAAGCATGCATTGGAAATGCTTAGGTAAAATGAAACTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCATATTTGTGGTTGACTaGCTTCTTGTCTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSIFVVD*LLVSLP
Trigger: GGGAAGAGAGACAAGAAGCAAGTCAACCACAAATAT...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp ACTGTGTGCCAGGTATTGCGTAACGTTATTGACATTCATTATTTCATTCACTCCCATGTATATGACGGTTaGCTAAAAGCAAGACTGACT +
Preference number: 5 (lower is better)
Translates to: TVCQVLRNVIDIHYFIHSHVYDG*LKARLT
Trigger: AGTCAGTCTTGCTTTTAGCAAACCGTCATATACATG...GGAGTGAATGAAATAATGAATGTCAATAACGTTACGCAATACCTGGCACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp AAGCAAAATTTTCTTAGAATCCTTCGGCTGCTCAACTGTAGGCATTTGAAATCCTATATACTTTTCACATaGGCCTCCAAGCCATGGTAT +
Preference number: 5 (lower is better)
Translates to: KQNFLRILRLLNCRHLKSYILFT*ASKPWY
Trigger: ATACCATGGCTTGGAGGCCAATGTGAAAAGTATATA...GGATTTCAAATGCCTACAGTTGAGCAGCCGAAGGATTCTAAGAAAATTTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS-3UTR CAA 90 bp CAGGGAAATCTTTTGCAAACGTGTTATCATAGGTACAGCCACATAACCCAACATTTTTCATCTCTACAATaGTGCAACTTTCTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: QGNLLQTCYHRYSHITQHFSSLQ*CNFLLS
Trigger: ACTGAGGAGAAAGTTGCACAATTGTAGAGATGAAAA...ATGTTGGGTTATGTGGCTGTACCTATGATAACACGTTTGCAAAAGATTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp CGGCTACTGCGGCTGGCTGCTGTCTCCTCCCCGCGCTaGTGCTGCTGCTGCTGCTGCCGCCGCCGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: RLLRLAAVSSPR*CCCCCCRRRAP
Trigger: CGGAGCCCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS CCA 72 bp GGGCGATGGGGGCAGGGAACGGTGGCCCGACTCCAGTaGCGGGGGCGGGCACAAGCCCGGGTAGGCGTCCAC +
Preference number: 6 (lower is better)
Translates to: GRWGQGTVARLQ*RGRAQARVGVH
Trigger: GTGGACGCCTACCCGGGCTTGTGCCCGCCCCCGCCACTGGAGTCGGGCCACCGTTCCCTGCCCCCATCGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp TGCTGTCTGCATTGCTCCCGCGGCTGCGGCGGCTACTaGGGCTGGCTGCTGTCTCCTCCCCGCGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: CCLHCSRGCGGY*GWLLSPPRAAA
Trigger: AGCAGCAGCGCGGGGAGGAGACAGCAGCCAGCCGCAGTAGCCGCCGCAGCCGCGGGAGCAATGCAGACAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 72 bp CTGCTGCCGCCGCCGGGCTCCGGGGGTGACGGTTGCTaGAATCGCTCCTGCCTCGCTCCACACCGACATCTT +
Preference number: 6 (lower is better)
Translates to: LLPPPGSGGDGC*NRSCLAPHRHL
Trigger: AAGATGTCGGTGTGGAGCGAGGCAGGAGCGATTGCAGCAACCGTCACCCCCGGAGCCCGGCGGCGGCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 72 bp GCGTTCTCAAGGTGCTGTCTGCATTGCTCCCGCGGCTaGGGCGGCTACTGCGGCTGGCTGCTGTCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: AFSRCCLHCSRG*GGYCGWLLSPP
Trigger: GGGAGGAGACAGCAGCCAGCCGCAGTAGCCGCCGCAGCCGCGGGAGCAATGCAGACAGCACCTTGAGAACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS CCA 72 bp TTGGGCGTGTGGGCCTCGTCCACGCGGTGCCCCAGCTaGAACTCGTGGGATTTGCTCCGATGCAGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: LGVWASSTRCPS*NSWDLLRCSAV
Trigger: CACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGCCCACACGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp AAGATTGGATTCGAGGTCACCGGATGCAGGATGACCTaGGGCGCCCGGGTCGGCGTCTCCGGCACCGGCACC +
Preference number: 6 (lower is better)
Translates to: KIGFEVTGCRMT*GARVGVSGTGT
Trigger: GGTGCCGGTGCCGGAGACGCCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS TCA 72 bp CTTCCAAGATTGGATTCGAGGTCACCGGATGCAGGATaGCCTGGGGCGCCCGGGTCGGCGTCTCCGGCACCG +
Preference number: 6 (lower is better)
Translates to: LPRLDSRSPDAG*PGAPGSASPAP
Trigger: CGGTGCCGGAGACGCCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS GCA 72 bp GAGTGCTTTAGCGCGTTCTCAAGGTGCTGTCTGCATTaGTCCCGCGGCTGCGGCGGCTACTGCGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ECFSAFSRCCLH*SRGCGGYCGWL
Trigger: CAGCCAGCCGCAGTAGCCGCCGCAGCCGCGGGAGCAATGCAGACAGCACCTTGAGAACGCGCTAAAGCACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS CCA 72 bp TTGCGCACATCGACGATTCGGAACCAGTGCCGTAGCTaGGGGAAGCCGTCCAGCTCCGCGTTGCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LRTSTIRNQCRS*GKPSSSALRSC
Trigger: GCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTTCCGAATCGTCGATGTGCGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp AGCTGGGGGAAGCCGTCCAGCTCCGCGTTGCGCTCCTaGAAGGCTACCTTCTTTTTGCAGGACAGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: SWGKPSSSALRS*KATFFLQDSCR
Trigger: CCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp AGGACCTCCTTGCGCACATCGACGATTCGGAACCAGTaGCGTAGCTGGGGGAAGCCGTCCAGCTCCGCGTTG +
Preference number: 6 (lower is better)
Translates to: RTSLRTSTIRNQ*RSWGKPSSSAL
Trigger: CAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTTCCGAATCGTCGATGTGCGCAAGGAGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp TTCTTGGCTTTGGGCGTGTGGGCCTCGTCCACGCGGTaGCCCAGCTGGAACTCGTGGGATTTGCTCCGATGC +
Preference number: 6 (lower is better)
Translates to: FLALGVWASSTR*PSWNSWDLLRC
Trigger: GCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGCCCACACGCCCAAAGCCAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp GAGTGGGGCTGGTGTGACAATAGTGCTGGACGCACTTaGACGGGACCCTGGGGCTCTGGGAGAGATGGGTGC +
Preference number: 6 (lower is better)
Translates to: EWGWCDNSAGRT*TGPWGSGRDGC
Trigger: GCACCCATCTCTCCCAGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACTATTGTCACACCAGCCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp TCGTCCACGCGGTGCCCCAGCTGGAACTCGTGGGATTaGCTCCGATGCAGCGCGGTGAATCCCGGGATCAAG +
Preference number: 6 (lower is better)
Translates to: SSTRCPSWNSWD*LRCSAVNPGIK
Trigger: CTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 90 bp ATTCGGAACCAGTGCCGTAGCTGGGGGAAGCCGTCCAGCTCCGCGTaGCGCTCCTGCAAGGCTACCTTCTTTTTGCAGGACAGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: IRNQCRSWGKPSSSA*RSCKATFFLQDSCR
Trigger: CCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTGGTTCCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 90 bp CTGAGGCAGGAGAGGGAGGCGTTGAGGCGGGCACACTCCTCCCGGTaGGCTCCGTATTTCTCCACAGTCTCGCACACCTGTTCATCCGTC +
Preference number: 6 (lower is better)
Translates to: LRQEREALRRAHSSR*APYFSTVSHTCSSV
Trigger: GACGGATGAACAGGTGTGCGAGACTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGCCCGCCTCAACGCCTCCCTCTCCTGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 90 bp GTGTGGGCCTCGTCCACGCGGTGCCCCAGCTGGAACTCGTGGGATTaGCTCCGATGCAGCGCGGTGAATCCCGGGATCAAGTGTATCAGT +
Preference number: 6 (lower is better)
Translates to: VWASSTRCPSWNSWD*LRCSAVNPGIKCIS
Trigger: ACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCGCGTGGACGAGGCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp GTCCACGGTTTGGAGTGCTTTAGCGCGTTCTCAAGGTaGTGTCTGCATTGCTCCCGCGGCTGCGGCGGCTAC +
Preference number: 6 (lower is better)
Translates to: VHGLECFSAFSR*CLHCSRGCGGY
Trigger: GTAGCCGCCGCAGCCGCGGGAGCAATGCAGACAGCACCTTGAGAACGCGCTAAAGCACTCCAAACCGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 72 bp GGATTTCCTTCCAAGATTGGATTCGAGGTCACCGGATaGAGGATGACCTGGGGCGCCCGGGTCGGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: GFPSKIGFEVTG*RMTWGARVGVS
Trigger: GGAGACGCCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS GCA 72 bp TCTCTGGTGCCAGGTGGCATAGCCAGCCATTCTGGATaGGCAGTTTGTCCTCCCGCCTGCCAGCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SLVPGGIASHSG*AVCPPACQPAA
Trigger: TGCTGCAGGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGCTATGCCACCTGGCACCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp TCATCCGTCATCTCCAAGAGGTCCTCCAGGCTCAGCTaGCCGGGGGAGATTTCCTCCAGGACCTCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: SSVISKRSSRLS*PGEISSRTSLR
Trigger: GCGCAAGGAGGTCCTGGAGGAAATCTCCCCCGGCCAGCTGAGCCTGGAGGACCTCTTGGAGATGACGGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp CAGTGCCGTAGCTGGGGGAAGCCGTCCAGCTCCGCGTaGCGCTCCTGCAAGGCTACCTTCTTTTTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: QCRSWGKPSSSA*RSCKATFFLQD
Trigger: GTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp GAGAGGGAGGCGTTGAGGCGGGCACACTCCTCCCGGTaGGCTCCGTATTTCTCCACAGTCTCGCACACCTGT +
Preference number: 6 (lower is better)
Translates to: EREALRRAHSSR*APYFSTVSHTC
Trigger: ACAGGTGTGCGAGACTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGCCCGCCTCAACGCCTCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 72 bp GTCCGTCCCTTACAGAGGCTGGTGATGATGGCCAGGTaGGGCGGGCTCATGCAGGCACCCATGAAAAGCACC +
Preference number: 6 (lower is better)
Translates to: VRPLQRLVMMAR*GGLMQAPMKST
Trigger: GGTGCTTTTCATGGGTGCCTGCATGAGCCCGCCTCACCTGGCCATCATCACCAGCCTCTGTAAGGGACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp AGTGCCGTAGCTGGGGGAAGCCGTCCAGCTCCGCGTTaGGCTCCTGCAAGGCTACCTTCTTTTTGCAGGACA +
Preference number: 6 (lower is better)
Translates to: SAVAGGSRPAPR*APARLPSFCRT
Trigger: TGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTTCCCCCAGCTACGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp ATGATCTCTGGTGCCAGGTGGCATAGCCAGCCATTCTaGATGCGCAGTTTGTCCTCCCGCCTGCCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: MISGARWHSQPF*MRSLSSRLPAC
Trigger: GCAGGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGCTATGCCACCTGGCACCAGAGATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp TCGGGGGACAGCTGGCGGATGATCTCTGGTGCCAGGTaGCATAGCCAGCCATTCTGGATGCGCAGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: SGDSWRMISGAR*HSQPFWMRSLS
Trigger: GGACAAACTGCGCATCCAGAATGGCTGGCTATGCCACCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp AAGGGGAGCTTATCCTCCTCTGTGTCGGGGGACAGCTaGCGGATGATCTCTGGTGCCAGGTGGCATAGCCAG +
Preference number: 6 (lower is better)
Translates to: KGSLSSSVSGDS*RMISGARWHSQ
Trigger: CTGGCTATGCCACCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 72 bp GGCCGTGGTACACTTGCCCAAAGCGGCCCTTTCCAATaGGCTCGCCGATCTCCAGCTGCTCAAAGGGGATGT +
Preference number: 6 (lower is better)
Translates to: GRGTLAQSGPFQ*ARRSPAAQRGC
Trigger: ACATCCCCTTTGAGCAGCTGGAGATCGGCGAGCTCATTGGAAAGGGCCGCTTTGGGCAAGTGTACCACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS TCA 72 bp GCTTATCCTCCTCTGTGTCGGGGGACAGCTGGCGGATaGTCTCTGGTGCCAGGTGGCATAGCCAGCCATTCT +
Preference number: 6 (lower is better)
Translates to: AYPPLCRGTAGG*SLVPGGIASHS
Trigger: AGAATGGCTGGCTATGCCACCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGAGGATAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp CGGTGCCCCAGCTGGAACTCGTGGGATTTGCTCCGATaGAGCGCGGTGAATCCCGGGATCAAGTGTATCAGT +
Preference number: 6 (lower is better)
Translates to: RCPSWNSWDLLR*SAVNPGIKCIS
Trigger: ACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGGGGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp CCTCCCAGTTGCAGGGACACGGCATGGTCCACGGTTTaGAGTGCTTTAGCGCGTTCTCAAGGTGCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: PPSCRDTAWSTV*SALARSQGAVC
Trigger: GCAGACAGCACCTTGAGAACGCGCTAAAGCACTCCAAACCGTGGACCATGCCGTGTCCCTGCAACTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS CAA 72 bp CCCTCCCAGTTGCAGGGACACGGCATGGTCCACGGTTaGGAGTGCTTTAGCGCGTTCTCAAGGTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PSQLQGHGMVHG*ECFSAFSRCCL
Trigger: CAGACAGCACCTTGAGAACGCGCTAAAGCACTCCAAACCGTGGACCATGCCGTGTCCCTGCAACTGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS CAA 90 bp AAGCCGTCCAGCTCCGCGTTGCGCTCCTGCAAGGCTACCTTCTTTTaGCAGGACAGCTGCCGGCTGAAGTACTTCACCAGCTTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: KPSSSALRSCKATFF*QDSCRLKYFTSLLS
Trigger: GGAGAGCAAGCTGGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCTGGACGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 90 bp TTCTCGCAGCTGCCTACGCTGCTGTGGATCTTGAGGTTCAAGGGTTaGCTCTTCTTCTTGGCTCTGGGCTGCCGCTGCCTCCTCGCTGGA +
Preference number: 6 (lower is better)
Translates to: FSQLPTLLWILRFKG*LFFLALGCRCLLAG
Trigger: TCCAGCGAGGAGGCAGCGGCAGCCCAGAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS CAA 90 bp CCTACGCTGCTGTGGATCTTGAGGTTCAAGGGTTTGCTCTTCTTCTaGGCTCTGGGCTGCCGCTGCCTCCTCGCTGGAATCGCAGACTCA +
Preference number: 6 (lower is better)
Translates to: PTLLWILRFKGLLFF*ALGCRCLLAGIADS
Trigger: TGAGTCTGCGATTCCAGCGAGGAGGCAGCGGCAGCCCAGAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS TCA 72 bp TTTCCTGCAGAGACTTGCTGCATCAGGGCTCTGGCATaGACCCACCCCCTCCCTAATCTCTGCCCCTCCAAC +
Preference number: 6 (lower is better)
Translates to: FPAETCCIRALA*THPLPNLCPSN
Trigger: GTTGGAGGGGCAGAGATTAGGGAGGGGGTGGGTTCATGCCAGAGCCCTGATGCAGCAAGTCTCTGCAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS GCA 72 bp TGCTTGATGGAGTTGCCGAGATCTCTGCGAGGGATCTaGGGGGACCAGCGTGGCACTGACAGTGTGTTTGCA +
Preference number: 6 (lower is better)
Translates to: CLMELPRSLRGI*GDQRGTDSVFA
Trigger: TGCAAACACACTGTCAGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGATCTCGGCAACTCCATCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS CAA 72 bp AGCTCCGCGTTGCGCTCCTGCAAGGCTACCTTCTTTTaGCAGGACAGCTGCCGGCTGAAGTACTTCACCAGC +
Preference number: 6 (lower is better)
Translates to: SSALRSCKATFF*QDSCRLKYFTS
Trigger: GCTGGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCGCAACGCGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp ATCACCTCCCGCTTGAAGGCCTTGAGCTGGTCCTCGTaGTCCCTCTCAATGTCAATCAGCCGGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: ITSRLKALSWSS*SLSMSISRMAT
Trigger: GGTGGCCATCCGGCTGATTGACATTGAGAGGGACAACGAGGACCAGCTCAAGGCCTTCAAGCGGGAGGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS TCA 72 bp GCAAGGCTACCTTCTTTTTGCAGGACAGCTGCCGGCTaGAGTACTTCACCAGCTTGCTCTCCAGGGTCCGGA +
Preference number: 6 (lower is better)
Translates to: ARLPSFCRTAAG*STSPACSPGSG
Trigger: TCCGGACCCTGGAGAGCAAGCTGGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 72 bp GCTGGAACTCGTGGGATTTGCTCCGATGCAGCGCGGTaGATCCCGGGATCAAGTGTATCAGTTTTCGGGAGG +
Preference number: 6 (lower is better)
Translates to: AGTRGICSDAAR*IPGSSVSVFGR
Trigger: CCTCCCGAAAACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp CAGTTGCAGGGACACGGCATGGTCCACGGTTTGGAGTaGTTTAGCGCGTTCTCAAGGTGCTGTCTGCATTGC +
Preference number: 6 (lower is better)
Translates to: QLQGHGMVHGLE*FSAFSRCCLHC
Trigger: GCAATGCAGACAGCACCTTGAGAACGCGCTAAAGCACTCCAAACCGTGGACCATGCCGTGTCCCTGCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339824.7
CDS GCA 72 bp CGCTCCTGCAAGGCTACCTTCTTTTTGCAGGACAGCTaGCGGCTGAAGTACTTCACCAGCTTGCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RSCKATFFLQDS*RLKYFTSLLSR
Trigger: CCTGGAGAGCAAGCTGGTGAAGTACTTCAGCCGGCAGCTGTCCTGCAAAAAGAAGGTAGCCTTGCAGGAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp GGCACACGGGATTGTTCTCCTTCCCCGTCTCTGTCGTaGGCCACTGGATGGTCCAGTCTTGTTTGGAAAGGT +
Preference number: 6 (lower is better)
Translates to: GTRDCSPSPSLS*ATGWSSLVWKG
Trigger: ACCTTTCCAAACAAGACTGGACCATCCAGTGGCCCACGACAGAGACGGGGAAGGAGAACAATCCCGTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp CCTCATGTCTCCCCAAGCATGGAGGTACCTGGCAGGTaGAAGTTCTTCTGCTGCCGTGTGCACTGTGGGGAA +
Preference number: 6 (lower is better)
Translates to: PHVSPSMEVPGR*KFFCCRVHCGE
Trigger: TTCCCCACAGTGCACACGGCAGCAGAAGAACTTCAACCTGCCAGGTACCTCCATGCTTGGGGAGACATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS CAA 72 bp CTCTGGTCATTGACCCATTCGCTTTCCTGCAGAGACTaGCTGCATCAGGGCTCTGGCATGAACCCACCCCCT +
Preference number: 6 (lower is better)
Translates to: LWSLTHSLSCRD*LHQGSGMNPPP
Trigger: AGGGGGTGGGTTCATGCCAGAGCCCTGATGCAGCAAGTCTCTGCAGGAAAGCGAATGGGTCAATGACCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS CAA 90 bp TGGAGTTCATACCAGATTGTGCCAAGGGCAAAGACGTCAGAGTGCTaGGAGAAGGGGAGCTTATCCTCCTCTGTGTCGGGGGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: WSSYQIVPRAKTSEC*EKGSLSSSVSGDSW
Trigger: CCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTTCTCCAAGCACTCTGACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 72 bp GGTCTGAATAGCGAGGTGGCTTCCGTAGAGGGTTGTTaGTGTCACACGGAACGGACTCTGTCCGGACTAACC +
Preference number: 6 (lower is better)
Translates to: GLNSEVASVEGC*CHTERTLSGLT
Trigger: GGTTAGTCCGGACAGAGTCCGTTCCGTGTGACATCAACAACCCTCTACGGAAGCCACCTCGCTATTCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS CCA 72 bp GGATTGTTCTCCTTCCCCGTCTCTGTCGTGGGCCACTaGATGGTCCAGTCTTGTTTGGAAAGGTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GLFSFPVSVVGH*MVQSCLERLPP
Trigger: AGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGCCCACGACAGAGACGGGGAAGGAGAACAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp TACCAGATTGTGCCAAGGGCAAAGACGTCAGAGTGCTaGGAGAAGGGGAGCTTATCCTCCTCTGTGTCGGGG +
Preference number: 6 (lower is better)
Translates to: YQIVPRAKTSEC*EKGSLSSSVSG
Trigger: CCCCGACACAGAGGAGGATAAGCTCCCCTTCTCCAAGCACTCTGACGTCTTTGCCCTTGGCACAATCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 72 bp GGATGTTCTCGCAGCTGCCTACGCTGCTGTGGATCTTaGGGTTCAAGGGTTTGCTCTTCTTCTTGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GCSRSCLRCCGS*GSRVCSSSWLW
Trigger: CCAGAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS CCA 72 bp TCTGCTGGTTGGGTCTTGAAAGGCCATTCCCTGGCGTaGAGTTCATACCAGATTGTGCCAAGGGCAAAGACG +
Preference number: 6 (lower is better)
Translates to: SAGWVLKGHSLA*SSYQIVPRAKT
Trigger: CGTCTTTGCCCTTGGCACAATCTGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp CTTCTTCTTGGCTCTGGGCTGCCGCTGCCTCCTCGCTaGAATCGCAGACTCACTTGCATTTGGTTCCATTTT +
Preference number: 6 (lower is better)
Translates to: LLLGSGLPLPPR*NRRLTCIWFHF
Trigger: AAAATGGAACCAAATGCAAGTGAGTCTGCGATTCCAGCGAGGAGGCAGCGGCAGCCCAGAGCCAAGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS CAA 72 bp GTCTCTGTCGTGGGCCACTGGATGGTCCAGTCTTGTTaGGAAAGGTTGCCTCCTGACATGTGGACATTCCTG +
Preference number: 6 (lower is better)
Translates to: VSVVGHWMVQSC*ERLPPDMWTFL
Trigger: CAGGAATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGCCCACGACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp GGGATGTTCTCGCAGCTGCCTACGCTGCTGTGGATCTaGAGGTTCAAGGGTTTGCTCTTCTTCTTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: GMFSQLPTLLWI*RFKGLLFFLAL
Trigger: CAGAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545002.1
CDS TCA 72 bp GAGGAGGGACAGGTTCATCTCCTCGAAGTCATCCTCTaGCTCTTCGGCCTCATCATGGACCTCTTCATTCTC +
Preference number: 6 (lower is better)
Translates to: EEGQVHLLEVIL*LFGLIMDLFIL
Trigger: GAGAATGAAGAGGTCCATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAGGAGATGAACCTGTCCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS GCA 72 bp TTTCATGCCTGTGCCCATTTGCCAGATTATTGCCTCTaGTGGTTGGGTCTTGAAAGGCCATTCCCTGGCGTG +
Preference number: 6 (lower is better)
Translates to: FHACAHLPDYCL*WLGLERPFPGV
Trigger: CACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp TCCTCGAAGTCATCCTCTGACTCTTCGGCCTCATCATaGACCTCTTCATTCTCCGACGTTGGCTCCACTTCA +
Preference number: 6 (lower is better)
Translates to: SSKSSSDSSASS*TSSFSDVGSTS
Trigger: TGAAGTGGAGCCAACGTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS CAA 90 bp TACGATAAGGGTCAGTCCACATACTTCCTTGCCCCTCTCTGGTCATaGACCCATTCGCTTTCCTGCAGAGACTTGCTGCATCAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: YDKGQSTYFLAPLWS*THSLSCRDLLHQGS
Trigger: AGAGCCCTGATGCAGCAAGTCTCTGCAGGAAAGCGAATGGGTCAATGACCAGAGAGGGGCAAGGAAGTATGTGGACTGACCCTTATCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS CAA 90 bp GTGAGGTCGTTGGAGGTAGCACATTTGGTCCTAAGCCCTTCCAGGTaGGAGATGCTCAAGTCTATCATGTTTTGGACCAGTTCGCACTGC +
Preference number: 6 (lower is better)
Translates to: VRSLEVAHLVLSPSR*EMLKSIMFWTSSHC
Trigger: GCAGTGCGAACTGGTCCAAAACATGATAGACTTGAGCATCTCCAACCTGGAAGGGCTTAGGACCAAATGTGCTACCTCCAACGACCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp GTTGGGTTTCATGCCTGTGCCCATTTGCCAGATTATTaGCTCTGCTGGTTGGGTCTTGAAAGGCCATTCCCT +
Preference number: 6 (lower is better)
Translates to: VGFHACAHLPDY*LCWLGLERPFP
Trigger: AGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp GATAAGGGTCAGTCCACATACTTCCTTGCCCCTCTCTaGTCATTGACCCATTCGCTTTCCTGCAGAGACTTG +
Preference number: 6 (lower is better)
Translates to: DKGQSTYFLAPL*SLTHSLSCRDL
Trigger: CAAGTCTCTGCAGGAAAGCGAATGGGTCAATGACCAGAGAGGGGCAAGGAAGTATGTGGACTGACCCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543793.1
CDS TCA 72 bp CCAAAAAGCATCCCTTTCCCACAGACTGTGCACGTCTaGGACATCCAGTACTTGGTGGAAAACCTGTGCTTG +
Preference number: 6 (lower is better)
Translates to: PKSIPFPQTVHV*DIQYLVENLCL
Trigger: CAAGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAGGGATGCTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS TCA 72 bp GAATGTCCGAGATTTCTTTTCCCATGCCAATCTGGCTaGGGTTGGGTTTCATGCCTGTGCCCATTTGCCAGA +
Preference number: 6 (lower is better)
Translates to: ECPRFLFPCQSG*GWVSCLCPFAR
Trigger: TCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp ATCTGGCTGAGGTTGGGTTTCATGCCTGTGCCCATTTaGCAGATTATTGCCTCTGCTGGTTGGGTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: IWLRLGFMPVPI*QIIASAGWVLK
Trigger: TTTCAAGACCCAACCAGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 90 bp AGAAGAATGTCCGAGATTTCTTTTCCCATGCCAATCTGGCTGAGGTaGGGTTTCATGCCTGTGCCCATTTGCCAGATTATTGCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: RRMSEISFPMPIWLR*GFMPVPICQIIASA
Trigger: AGCAGAGGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGACATTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS GCA 72 bp ATGCTCAAGTCTATCATGTTTTGGACCAGTTCGCACTaGTGTAAGGCTTTTTGCAAACTCAGAGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: MLKSIMFWTSSH*CKAFCKLRGCC
Trigger: GCAGCAGCCTCTGAGTTTGCAAAAAGCCTTACAGCAGTGCGAACTGGTCCAAAACATGATAGACTTGAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp ATTTCTTTTTGTGTGAGGTCGTTGGAGGTAGCACATTaGGTCCTAAGCCCTTCCAGGTTGGAGATGCTCAAG +
Preference number: 6 (lower is better)
Translates to: ISFCVRSLEVAH*VLSPSRLEMLK
Trigger: CTTGAGCATCTCCAACCTGGAAGGGCTTAGGACCAAATGTGCTACCTCCAACGACCTCACACAAAAAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CAA 72 bp TCCGAGATTTCTTTTCCCATGCCAATCTGGCTGAGGTaGGGTTTCATGCCTGTGCCCATTTGCCAGATTATT +
Preference number: 6 (lower is better)
Translates to: SEISFPMPIWLR*GFMPVPICQII
Trigger: AATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS CCA 72 bp CCTTCCAGGTTGGAGATGCTCAAGTCTATCATGTTTTaGACCAGTTCGCACTGCTGTAAGGCTTTTTGCAAA +
Preference number: 6 (lower is better)
Translates to: PSRLEMLKSIMF*TSSHCCKAFCK
Trigger: TTTGCAAAAAGCCTTACAGCAGTGCGAACTGGTCCAAAACATGATAGACTTGAGCATCTCCAACCTGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339824.7
ENST00000425217.5
CDS TCA 72 bp ATTTGTTGTGGCACTTTAACTTGCAGTTTTTACACTTaGGGCCAAAAAGCATCCCTTTCCCACAGACTGTGC +
Preference number: 6 (lower is better)
Translates to: ICCGTLTCSFYT*GQKASLSHRLC
Trigger: GCACAGTCTGTGGGAAAGGGATGCTTTTTGGCCTCAAGTGTAAAAACTGCAAGTTAAAGTGCCACAACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS TCA 72 bp ACCTCTTCATTCTCCGACGTTGGCTCCACTTCAATTTaGAGTAATGGATTTCCTTCCAAGATTGGATTCGAG +
Preference number: 6 (lower is better)
Translates to: TSSFSDVGSTSI*SNGFPSKIGFE
Trigger: CTCGAATCCAATCTTGGAAGGAAATCCATTACTTCAAATTGAAGTGGAGCCAACGTCGGAGAATGAAGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS CAA 72 bp CATTTGTTGTGGCACTTTAACTTGCAGTTTTTACACTaGAGGCCAAAAAGCATCCCTTTCCCACAGACTGTG +
Preference number: 6 (lower is better)
Translates to: HLLWHFNLQFLH*RPKSIPFPQTV
Trigger: CACAGTCTGTGGGAAAGGGATGCTTTTTGGCCTCAAGTGTAAAAACTGCAAGTTAAAGTGCCACAACAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339824.7
ENST00000425217.5
ENST00000545002.1
CDS TCA 72 bp ATGCTTACCTTGTGGCTGTTCCAAAGATTAAATAAGTaGTATAAGGGTAATTGCTTAGGGTACGATAAGGGT +
Preference number: 6 (lower is better)
Translates to: MLTLWLFQRLNK*YKGNCLGYDKG
Trigger: ACCCTTATCGTACCCTAAGCAATTACCCTTATATCACTTATTTAATCTTTGGAACAGCCACAAGGTAAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543793.1