Pregenerated sensors for KRTDAP (Homo sapiens)
Ensembl gene IDs: ENSG00000188508Ensembl transcript IDs: ENST00000338897.4, ENST00000479340.1, ENST00000484218.6
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGTTTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTaGGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: NVLLEFLRQERVMVG*ESALTLAPSSSGGH Trigger: ATGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAAACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| 3UTR CAA 90 bp | AAATGTTTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTaGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KCFIGVPEAGKSYGR*RISAHASPLFQWRS Trigger: TGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAAACATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| 3UTR TCA 72 bp | TTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTaGGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LEFLRQERVMVG*ESALTLAPSSS Trigger: ACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCGCTCCCTGGGCAGAGTaGAGCACCAGGAGGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PEAGKSYGRLRISAHASPAPWAE*STRRER Trigger: CCTCTCCCTCCTGGTGCTCCACTCTGCCCAGGGAGC...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | AGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGGCTCCCTGGGCAGAGTaGAGCACCAGGAGGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SYGRLRISAHASPLFQWRAPWAE*STRRER Trigger: CCTCTCCCTCCTGGTGCTCCACTCTGCCCAGGGAGC...CCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | TATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCACAGGACCACCCAGGGTaGCTCCCTGGGCAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YGRLRISAHASPLFQWRSQDHPG*LPGQSG Trigger: TCCACTCTGCCCAGGGAGCCACCCTGGGTGGTCCTG...TGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCAGGACCACCCAGGGTaGCTCCCTGGGCAGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PEAGKSYGRLRISAHASPQDHPG*LPGQSG Trigger: TCCACTCTGCCCAGGGAGCCACCCTGGGTGGTCCTG...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR GCA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCGCGTCAAGTTTGGGGTaGTCTGAGGCGGGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEAGKSYGRLRISAHASPASSLG*SEAGPQ Trigger: CTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGC...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | AGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGAGCCCCCTCTTCCAGTaGAGGTCATGGTCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SYGRLRISAHASPLFQWRSPLFQ*RSWSLG Trigger: GCCCAGTGACCATGACCTCCACTGGAAGAGGGGGCT...CCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCAGCCCCCTCTTCCAGTaGAGGTCATGGTCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PEAGKSYGRLRISAHASPSPLFQ*RSWSLG Trigger: GCCCAGTGACCATGACCTCCACTGGAAGAGGGGGCT...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | TATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCATCATGGCGTCAAGTTTaGGGTGCTCTGAGGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: YGRLRISAHASPLFQWRSSWRQV*GALRRG Trigger: GCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGA...TGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS-3UTR TCA 90 bp | AGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTGCCAAGGAGGCAGATaGGCACAGAAATGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SYGRLRISAHASPLFQWRCQGGR*AQKWGP Trigger: GGGACCCCATTTCTGTGCTCATCTGCCTCCTTGGCA...CCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | TATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCAGGAGGTCATGGTCACTaGGCATCAGGAGTTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: YGRLRISAHASPLFQWRSGGHGH*ASGVAL Trigger: GAGCGCAACTCCTGATGCCCAGTGACCATGACCTCC...TGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR GCA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTGGGCATCAGGAGTTaGGCTCCTCAGTCCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: PEAGKSYGRLRISAHASPLGIRS*APQSFQ Trigger: CTGAAAGGACTGAGGAGCGCAACTCCTGATGCCCAG...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | TATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCAGGACCGGGATCTTCATaGCGTCAAGTTTGGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: YGRLRISAHASPLFQWRSGPGSS*RQVWGA Trigger: AGCACCCCAAACTTGACGCCATGAAGATCCCGGTCC...TGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR TCA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCAAACGCCTCGGGTCGTaGCGCATAATTCTCAATGGT | + |
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Preference number: 4 (lower is better) Translates to: PEAGKSYGRLRISAHASPKRLGS*RIILNG Trigger: ACCATTGAGAATTATGCGTCACGACCCGAGGCGTTT...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS-3UTR GCA 90 bp | TATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCACGGGGCCTCAGTGCTTaGTCTTTATATTGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YGRLRISAHASPLFQWRSRGLSA*SLYCQG Trigger: TCCTTGGCAATATAAAGAGCAAGCACTGAGGCCCCG...TGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| 3UTR CAA 72 bp | ATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTaGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IGVPEAGKSYGR*RISAHASPLFQ Trigger: CTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR TCA 90 bp | AGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGAGAGTTATGGTAGGTTaGGAATCAGCGCTCACGCTA | + |
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Preference number: 4 (lower is better) Translates to: SYGRLRISAHASPLFQWRRVMVG*ESALTL Trigger: TAGCGTGAGCGCTGATTCTCAACCTACCATAACTCT...CCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR TCA 90 bp | TTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTAAAGGCCTCGGGTCGTaGCGCATAATTCTCAATGGT | + |
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Preference number: 4 (lower is better) Translates to: FIGVPEAGKSYGRLRISAKGLGS*RIILNG Trigger: ACCATTGAGAATTATGCGTCACGACCCGAGGCCTTT...AGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338897.4 |
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| CDS-3UTR GCA 90 bp | TTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTGACTCAAAGAGGGCGTaGCAGTTCAGGAACTCATCA | + |
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Preference number: 4 (lower is better) Translates to: FIGVPEAGKSYGRLRISADSKRA*QFRNSS Trigger: TGATGAGTTCCTGAACTGGCACGCCCTCTTTGAGTC...AGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CCA 90 bp | AAATGTTTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCGGAGGTCATGGTCACTaGGCATCAGGAGTTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: KCFIGVPEAGKSYGRLRIGGHGH*ASGVAL Trigger: GAGCGCAACTCCTGATGCCCAGTGACCATGACCTCC...GATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAAACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR TCA 90 bp | TTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTAGAGTTATGGTAGGTTaGGAATCAGCGCTCACGCTA | + |
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Preference number: 4 (lower is better) Translates to: FIGVPEAGKSYGRLRISARVMVG*ESALTL Trigger: TAGCGTGAGCGCTGATTCTCAACCTACCATAACTCT...AGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCCTGGGCATCAGGAGTTaGGCTCCTCAGTCCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KCFIGVPEAGKSYGRLRILGIRS*APQSFQ Trigger: CTGAAAGGACTGAGGAGCGCAACTCCTGATGCCCAG...GATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAAACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCGAGGCGGGGCCTCAGTaGTTGCTCTTTATATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KCFIGVPEAGKSYGRLRIEAGPQ*LLFILP Trigger: TGGCAATATAAAGAGCAAGCACTGAGGCCCCGCCTC...GATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAAACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS-3UTR GCA 90 bp | AAATGTTTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCGACTCAAAGAGGGCGTaGCAGTTCAGGAACTCATCA | + |
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Preference number: 4 (lower is better) Translates to: KCFIGVPEAGKSYGRLRIDSKRA*QFRNSS Trigger: TGATGAGTTCCTGAACTGGCACGCCCTCTTTGAGTC...GATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAAACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS CCA 90 bp | CCAGGAGGGAGAGGAGCACCACGGCAGGAAGGACCGGGATCTTCATaGCGTCAAGTTTGGGGTGCTCTGAGGCGGGGCCTCAGTGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: PGGRGAPRQEGPGSS*RQVWGALRRGLSAC Trigger: GCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCCTGCCGTGGTGCTCCTCTCCCTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS CCA 90 bp | GGAGCACCACGGCAGGAAGGACCGGGATCTTCATGGCGTCAAGTTTaGGGTGCTCTGAGGCGGGGCCTCAGTGCTTGCTCTTTATATTGC | + |
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Preference number: 5 (lower is better) Translates to: GAPRQEGPGSSWRQV*GALRRGLSACSLYC Trigger: GCAATATAAAGAGCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCCTGCCGTGGTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS GCA 90 bp | ACCACGGCAGGAAGGACCGGGATCTTCATGGCGTCAAGTTTGGGGTaGTCTGAGGCGGGGCCTCAGTGCTTGCTCTTTATATTGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: TTAGRTGIFMASSLG*SEAGPQCLLFILPR Trigger: CCTTGGCAATATAAAGAGCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCCTGCCGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS CCA 90 bp | TCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCATGGTCACTaGGCATCAGGAGTTGCGCTCCTCAGTCCTTTCAGCTTAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SALTLAPSSSGGHGH*ASGVALLSPFSLGK Trigger: CTTTCCTAAGCTGAAAGGACTGAGGAGCGCAACTCCTGATGCCCAGTGACCATGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000338897.4 ENST00000479340.1 ENST00000484218.6 |
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| CDS CCA 90 bp | TATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTaGAGGTCATGGTCACTGGGCATCAGGAGTTGCGCTCCTCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: YGRLRISAHASPLFQ*RSWSLGIRSCAPQS Trigger: GGACTGAGGAGCGCAACTCCTGATGCCCAGTGACCATGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000338897.4 ENST00000479340.1 ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCTTCATGGCGTCAAGTTaGGGGTGCTCTGAGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: PEAGKSYGRLRISAHASPFMASS*GCSEAG Trigger: CCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAA...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS CCA 90 bp | TTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCATaGTCACTGGGCATCAGGAGTTGCGCTCCTCAGTCCTTTCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: LRISAHASPLFQWRS*SLGIRSCAPQSFQL Trigger: AAGCTGAAAGGACTGAGGAGCGCAACTCCTGATGCCCAGTGACCATGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000338897.4 ENST00000479340.1 ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCAAGAGTTATGGTAGGTaGAGAATCAGCGCTCACGCT | + |
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Preference number: 5 (lower is better) Translates to: PEAGKSYGRLRISAHASPKSYGR*RISAHA Trigger: AGCGTGAGCGCTGATTCTCAACCTACCATAACTCTT...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | TATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGTCATGCTTGCTCTTTATATaGCCAAGGAGGCAGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: YGRLRISAHASPLFQWRSCLLFI*PRRQMS Trigger: GCTCATCTGCCTCCTTGGCAATATAAAGAGCAAGCA...TGACCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | AGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCCTCTTCCAGTGGAGGAAAGGAAGTTTCCTTTaGATAGACTCAAAGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: SYGRLRISAHASPLFQWRKGSFL*IDSKRA Trigger: CGCCCTCTTTGAGTCTATCAAAAGGAAACTTCCTTT...CCTCCACTGGAAGAGGGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTCACGCTAGCCCCAAAGGAAGTTTCCTTTaGATAGACTCAAAGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PEAGKSYGRLRISAHASPKGSFL*IDSKRA Trigger: CGCCCTCTTTGAGTCTATCAAAAGGAAACTTCCTTT...GGGGCTAGCGTGAGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | TTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTGCGGGGCCTCAGTGCTaGCTCTTTATATTGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: FIGVPEAGKSYGRLRISAAGPQC*LFILPR Trigger: CCTTGGCAATATAAAGAGCAAGCACTGAGGCCCCGC...AGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | TTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTAACGCAGATCGCAATTaGTCGATGTTCAGGAACGGG | + |
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Preference number: 5 (lower is better) Translates to: FIGVPEAGKSYGRLRISANADRN*SMFRNG Trigger: CCCGTTCCTGAACATCGACAAATTGCGATCTGCGTT...AGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338897.4 |
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| CDS-3UTR CAA 90 bp | TTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCAGCGCTGGAAAGGCATCCCAGTaGAGGAAAGGAAGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: FIGVPEAGKSYGRLRISAGKASQ*RKGSFL Trigger: AAGGAAACTTCCTTTCCTCAACTGGGATGCCTTTCC...AGCGCTGATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS-3UTR CAA 90 bp | AAATGTTTTATTGGAGTTCCTGAGGCAGGAAAGAGTTATGGTAGGTTGAGAATCACTGGGCATCAGGAGTaGCGCTCCTCAGTCCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: KCFIGVPEAGKSYGRLRITGHQE*RSSVLS Trigger: TGAAAGGACTGAGGAGCGCAACTCCTGATGCCCAGT...GATTCTCAACCTACCATAACTCTTTCCTGCCTCAGGAACTCCAATAAAACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338897.4 ENST00000484218.6 |
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| CDS GCA 72 bp | GTTTCCACCCCCACCCACGCTCCGGGAAGCTCTCTGTaGAGCGAGGACGGAGCGTCCTCCCTGGGAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSTPTHAPGSSL*SEDGASSLGGP Trigger: GGGCCCTCCCAGGGAGGACGCTCCGTCCTCGCTGCACAGAGAGCTTCCCGGAGCGTGGGTGGGGGTGGAAAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479340.1 |
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| CDS CCA 72 bp | AGAGGAGCACCACGGCAGGAAGGACCGGGATCTTCATaGCGTCAAGTTTGGGGTGCTCTGAGGCGGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGAPRQEGPGSS*RQVWGALRRGL Trigger: GAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCCTGCCGTGGTGCTCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS CCA 72 bp | TTTCTTCCTCCGCGTCTCCCCCGGTGCCTCAGTGACTaGGCTGAGGAGACTTCAGCTCCCCACGGGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLPPRLPRCLSD*AEETSAPHGFP Trigger: TGGAAACCCGTGGGGAGCTGAAGTCTCCTCAGCCCAGTCACTGAGGCACCGGGGGAGACGCGGAGGAAGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479340.1 |
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| CDS CCA 72 bp | CGGCAGGAAGGACCGGGATCTTCATGGCGTCAAGTTTaGGGTGCTCTGAGGCGGGGCCTCAGTGCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RQEGPGSSWRQV*GALRRGLSACS Trigger: AGAGCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS CAA 72 bp | ACGGCAGGAAGGACCGGGATCTTCATGGCGTCAAGTTaGGGGTGCTCTGAGGCGGGGCCTCAGTGCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TAGRTGIFMASS*GCSEAGPQCLL Trigger: GAGCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCCTGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS GCA 72 bp | TCTCAATGGTGCTTTCTTCCTCCGCGTCTCCCCCGGTaGCTCAGTGACTGGGCTGAGGAGACTTCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SQWCFLPPRLPR*LSDWAEETSAP Trigger: GGGAGCTGAAGTCTCCTCAGCCCAGTCACTGAGGCACCGGGGGAGACGCGGAGGAAGAAAGCACCATTGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479340.1 |
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| CDS CCA 72 bp | ACGCTAGCCCCCTCTTCCAGTGGAGGTCATGGTCACTaGGCATCAGGAGTTGCGCTCCTCAGTCCTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLAPSSSGGHGH*ASGVALLSPFS Trigger: GCTGAAAGGACTGAGGAGCGCAACTCCTGATGCCCAGTGACCATGACCTCCACTGGAAGAGGGGGCTAGCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000338897.4 ENST00000479340.1 ENST00000484218.6 |
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| CDS CAA 90 bp | AGGAGCACCACGGCAGGAAGGACCGGGATCTTCATGGCGTCAAGTTaGGGGTGCTCTGAGGCGGGGCCTCAGTGCTTGCTCTTTATATTG | + |
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Preference number: 6 (lower is better) Translates to: RSTTAGRTGIFMASS*GCSEAGPQCLLFIL Trigger: CAATATAAAGAGCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCCTGCCGTGGTGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS GCA 72 bp | GGAAGGACCGGGATCTTCATGGCGTCAAGTTTGGGGTaGTCTGAGGCGGGGCCTCAGTGCTTGCTCTTTATA | + |
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Preference number: 6 (lower is better) Translates to: GRTGIFMASSLG*SEAGPQCLLFI Trigger: TATAAAGAGCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAAGATCCCGGTCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS CAA 90 bp | TTCATGGCGTCAAGTTTGGGGTGCTCTGAGGCGGGGCCTCAGTGCTaGCTCTTTATATTGCCAAGGAGGCAGATGAGCACAGAAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: FMASSLGCSEAGPQC*LFILPRRQMSTEMG Trigger: CCCCATTTCTGTGCTCATCTGCCTCCTTGGCAATATAAAGAGCAAGCACTGAGGCCCCGCCTCAGAGCACCCCAAACTTGACGCCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484218.6 |
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| CDS CAA 72 bp | CTCCTCAGTCCTTTCAGCTTAGGAAAGGCATCCCAGTaGAGGAAAGGAAGTTTCCTTTTGATAGACTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLSPFSLGKASQ*RKGSFLLIDSK Trigger: CTTTGAGTCTATCAAAAGGAAACTTCCTTTCCTCAACTGGGATGCCTTTCCTAAGCTGAAAGGACTGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338897.4 ENST00000479340.1 ENST00000484218.6 |
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