Pregenerated sensors for KRTCAP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000157992Ensembl transcript IDs: ENST00000288873.7, ENST00000407293.5, ENST00000452499.1, ENST00000453171.5, ENST00000464699.5, ENST00000494572.1, ENST00000543753.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCCTGAAGTCCGTCCTTCCTGCAGGGCCCAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGTAACCAGATAGAGCAGCCTCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: APEVRPSCRAQLHVE*VQPHSSNQIEQPPL Trigger: CAGGGGAGGCTGCTCTATCTGGTTACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTGGGCCCTGCAGGAAGGACGGACTTCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| 3UTR GCA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTaGCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACC | + |
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Preference number: 1 (lower is better) Translates to: CHIHNALTLIPGNRG*QAFCFTLASHPATT Trigger: GGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| 3UTR-3UTR CCA 90 bp | TTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGAAACGGCCCCTCATCCAGTaGTACCAGAGGATCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLQFVISSRGQGPLLSGKRPLIQ*YQRIQQ Trigger: CTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCG...TTTCCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGCCATATTCAAATCCCAGGAAACCGTaGCTGCCAGGCTTTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: AALQDHWSGSSVTLVPYSNPRKP*LPGFLF Trigger: AAACAGAAAGCCTGGCAGCCACGGTTTCCTGGGATT...TGAATATGGCACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| 3UTR-3UTR GCA 90 bp | CGGAACAGCACCTGTCCTAAACCCAACTTCTCTGTGATGCCCGGATTTCTTGATAGCTGCTCATTTTCCTaGCTTTTACATTTAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RNSTCPKPNFSVMPGFLDSCSFS*LLHLGD Trigger: ATCTCCTAAATGTAAAAGGCAGGAAAATGAGCAGCT...ATCAAGAAATCCGGGCATCACAGAGAAGTTGGGTTTAGGACAGGTGCTGTTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| 3UTR TCA 72 bp | GTCCGTCCTTCCTGCAGGGCCCAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGTAACCAGATAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VRPSCRAQLHVE*VQPHSSNQIEQ Trigger: CTGCTCTATCTGGTTACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTGGGCCCTGCAGGAAGGACGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| 3UTR GCA 72 bp | CATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTaGCAGGCTTTCTGTTTCACTCTTGCGTCACACCCA | + |
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Preference number: 3 (lower is better) Translates to: HNALTLIPGNRG*QAFCFTLASHP Trigger: TGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | GGGGCAGTCAGTATGTCCCGGCCCCTCATCCAGTGGTACCAGAGGATCCAGCAGTCCTCTAGCTGCCCCTaGAGTCCGTCCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAVSMSRPLIQWYQRIQQSSSCP*SPSFLQ Trigger: CTGCAGGAAGGACGGACTTCAGGGGCAGCTAGAGGA...CTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCGGGACATACTGACTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| CDS-3UTR GCA 90 bp | CGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTGTCGTGCCGCAGGACGGTaGCATGCAGCACGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGCQAFCFTLASHPATTCRAAGR*HAARPP Trigger: TGGGGGCCGTGCTGCATGGCACCGTCCTGCGGCACG...ACAGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | GGGGCAGTCAGTATGTCCCGGCCCCTCATCCAGTGGTACCAGAGGATCCAGCAGCACCGTTGGCCACAGTaGGTGACACAGCAAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GAVSMSRPLIQWYQRIQQHRWPQ*VTQQEG Trigger: TCCTTCTTGCTGTGTCACTCACTGTGGCCAACGGTG...CTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCGGGACATACTGACTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| CDS-3UTR TCA 90 bp | GAACAGCACCTGCTGGACAGAGGGGAGAACCAACCCAGGTCAGAGGGGAAAGCATCCTCTAGCTGCCCCTaGAGTCCGTCCTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EQHLLDRGENQPRSEGKASSSCP*SPSFLQ Trigger: CTGCAGGAAGGACGGACTTCAGGGGCAGCTAGAGGA...TGCTTTCCCCTCTGACCTGGGTTGGTTCTCCCCTCTGTCCAGCAGGTGCTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000494572.1 |
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| CDS-3UTR GCA 90 bp | GAACAGCACCTGCTGGACAGAGGGGAGAACCAACCCAGGTCAGAGGGGAAAGCAGAAGTCCGTCCTTCCTaGAGGGCCCAACTCCACGTA | + |
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Preference number: 4 (lower is better) Translates to: EQHLLDRGENQPRSEGKAEVRPS*RAQLHV Trigger: TACGTGGAGTTGGGCCCTGCAGGAAGGACGGACTTC...TGCTTTCCCCTCTGACCTGGGTTGGTTCTCCCCTCTGTCCAGCAGGTGCTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494572.1 |
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| CDS-3UTR CCA 90 bp | ATGTCCCGGCCCCTCATCCAGTGGTACCAGAGGATCCAGCAGTCCTGGGTGGCAAGGATCCAGCAGTCCTaGGTGGCAGTCAGCAATAAG | + |
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Preference number: 4 (lower is better) Translates to: MSRPLIQWYQRIQQSWVARIQQS*VAVSNK Trigger: CTTATTGCTGACTGCCACCCAGGACTGCTGGATCCT...TGCCACCCAGGACTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCGGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| CDS-3UTR TCA 90 bp | ACTTCCTTGTCCCCGCTCTTACCCGGGCCACCACCTTCAAGGCCCATTACCTGTCCTCCCCTGCAGACATaGGCAAAGAAGGGATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TSLSPLLPGPPPSRPITCPPLQT*AKKGSR Trigger: TCTGGATCCCTTCTTTGCTCATGTCTGCAGGGGAGG...ACAGGTAATGGGCCTTGAAGGTGGTGGCCCGGGTAAGAGCGGGGACAAGGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494572.1 |
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| CDS-3UTR TCA 90 bp | ACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTTCCTCTAGCTGCCCCTaGAGTCCGTCCTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TVAARLSVSLLRHTQLLPSSSCP*SPSFLQ Trigger: CTGCAGGAAGGACGGACTTCAGGGGCAGCTAGAGGA...AGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | ACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGCGGTGTACTCCGGCGTaGCAGCGCCGCGGGGATTGG | + |
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Preference number: 4 (lower is better) Translates to: TLLQFVISSRGQGPLLSGRCTPA*QRRGDW Trigger: CCAATCCCCGCGGCGCTGTCACGCCGGAGTACACCG...CCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
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| CDS-3UTR TCA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTCGGTGTACTCCGGCGTaGCAGCGCCGCGGGGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHIHNALTLIPGNRGCQARCTPA*QRRGDW Trigger: CCAATCCCCGCGGCGCTGTCACGCCGGAGTACACCG...AGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | CGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTGTGTTGGCCACAGTGAGTaGCACAGCAAGAAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGCQAFCFTLASHPATTCVGHSE*HSKKEA Trigger: GGCCTCCTTCTTGCTGTGTCACTCACTGTGGCCAAC...ACAGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | GGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTCAGGACCCAGTGCAGTaGAGGGCGAAGAAGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GNRGCQAFCFTLASHPATQDPVQ*RAKKVP Trigger: AGGAACCTTCTTCGCCCTCCACTGCACTGGGTCCTG...AGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | TATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGAAAACGGTGTACTCCGGCGTaGCAGCGCCGCGGGGATTGG | + |
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Preference number: 4 (lower is better) Translates to: YYNLLSHPEVRAPCLVGKRCTPA*QRRGDW Trigger: CCAATCCCCGCGGCGCTGTCACGCCGGAGTACACCG...TTTTCCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
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| CDS-3UTR TCA 90 bp | GGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTCCTCCCCTGCAGACATaGGCAAAGAAGGGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNRGCQAFCFTLASHPATPPLQT*AKKGSR Trigger: TCTGGATCCCTTCTTTGCTCATGTCTGCAGGGGAGG...AGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | ACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTCAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVAARLSVSLLRHTQLLPQLHVE*VQPHSS Trigger: ACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTG...AGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | CCAACCCAGGTCAGAGGGGAAAGCAGCATGGCAAGACCTAGACCCAGTTCTAAGCAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PTQVRGESSMARPRPSSKQLHVE*VQPHSS Trigger: ACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTG...CTTAGAACTGGGTCTAGGTCTTGCCATGCTGCTTTCCCCTCTGACCTGGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494572.1 |
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| CDS-3UTR CCA 90 bp | TTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGCAGCGCCGCGGGGATTaGCCACGTGCCGCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LLYYNLLSHPEVRAPCLVQRRGD*PRAAGR Trigger: CCGTCCTGCGGCACGTGGCCAATCCCCGCGGCGCTG...CACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
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| CDS-3UTR TCA 90 bp | GATCCAGAGAGCCAAGGCTGTATCATAGATTCTTGTGGGGTCAAAGGGGCAGTCGTTGGCCACAGTGAGTaGCACAGCAAGAAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DPESQGCIIDSCGVKGAVVGHSE*HSKKEA Trigger: GGCCTCCTTCTTGCTGTGTCACTCACTGTGGCCAAC...GACTGCCCCTTTGACCCCACAAGAATCTATGATACAGCCTTGGCTCTCTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| CDS-3UTR GCA 90 bp | CGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTGTCCAGGAAACCGTGGCTaGCAGGCTTTCTGTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: RGCQAFCFTLASHPATTCPGNRG*QAFCFT Trigger: AGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCTGG...ACAGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | AAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCCAGCGCCGCGGGGATTaGCCACGTGCCGCAGGACGG | + |
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Preference number: 4 (lower is better) Translates to: KREVTLLQFVISSRGQGPQRRGD*PRAAGR Trigger: CCGTCCTGCGGCACGTGGCCAATCCCCGCGGCGCTG...GGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
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| CDS-3UTR GCA 90 bp | TCTGTGGCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGCCAGAAGTCCGTCCTTCCTaGAGGGCCCAACTCCACGTA | + |
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Preference number: 4 (lower is better) Translates to: SVAALQDHWSGSSVTLVPEVRPS*RAQLHV Trigger: TACGTGGAGTTGGGCCCTGCAGGAAGGACGGACTTC...TGGCACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | AGCCAAGGCTGTATCATAGATTCTTGTGGGGTCAAAGGGGCAGTCAGTATGTCCTCCAGCAGTCCTGGGTaGCAGTCAGCAATAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SQGCIIDSCGVKGAVSMSSSSPG*QSAIRR Trigger: CCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGA...GGACATACTGACTGCCCCTTTGACCCCACAAGAATCTATGATACAGCCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453171.5 |
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| CDS-3UTR CCA 90 bp | CGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTGTAATCCCAGGAAACCGTaGCTGCCAGGCTTTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RGCQAFCFTLASHPATTCNPRKP*LPGFLF Trigger: AAACAGAAAGCCTGGCAGCCACGGTTTCCTGGGATT...ACAGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | AGGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACAATCCCAGGAAACCGTaGCTGCCAGGCTTTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RKPWLPGFLFHSCVTPSYNPRKP*LPGFLF Trigger: AAACAGAAAGCCTGGCAGCCACGGTTTCCTGGGATT...GTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | CAGGTCAGAGGGGAAAGCAGCATGGCAAGACCTAGACCCAGTTCTAAGAGCACTGAGGGGAAAGCAGCATaGCAAGACCTAGACCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: QVRGESSMARPRPSSKSTEGKAA*QDLDPV Trigger: AACTGGGTCTAGGTCTTGCCATGCTGCTTTCCCCTC...AGTGCTCTTAGAACTGGGTCTAGGTCTTGCCATGCTGCTTTCCCCTCTGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494572.1 |
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| CDS-3UTR TCA 90 bp | GCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGCCATATTCATCCTCTAGCTGCCCCTaGAGTCCGTCCTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: AALQDHWSGSSVTLVPYSSSSCP*SPSFLQ Trigger: CTGCAGGAAGGACGGACTTCAGGGGCAGCTAGAGGA...TGAATATGGCACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR GCA 90 bp | CATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTTTCCGAAAGCGCAGAGACTaGAGCGCCTCATCCCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: HIHNALTLIPGNRGCQAFRKRRD*SASSRP Trigger: CGGACGGGATGAGGCGCTGCAGTCTCTGCGCTTTCG...GAAAGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR GCA 90 bp | GAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCCGGGCGGCGTCTaGAAAGCACGGGGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EEKRSYFITICYLIPRSGPPGGV*KARGRA Trigger: TGCCCTCCCCCGTGCTTTGCAGACGCCGCCCGGGGG...CCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000407293.5 |
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| CDS-3UTR CCA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTAGCAGCAGGTTCACGTaGCCCACCAAGATCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: CHIHNALTLIPGNRGCQASSRFT*PTKISA Trigger: CGCGCTGATCTTGGTGGGCCACGTGAACCTGCTGCT...AGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | AGTTCTGTGGCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGTCCAGCAGTCCTGGGTaGCAGTCAGCAATAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SSVAALQDHWSGSSVTLVSSSPG*QSAIRR Trigger: CCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGA...CACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGCCACAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTCGGCCCCTCATCCAGTaGTACCAGAGGATCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CHIHNALTLIPGNRGCQARPLIQ*YQRIQQ Trigger: CTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCG...AGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | TATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGAAAATCCTCTAGCTGCCCCTaGAGTCCGTCCTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YYNLLSHPEVRAPCLVGKSSSCP*SPSFLQ Trigger: CTGCAGGAAGGACGGACTTCAGGGGCAGCTAGAGGA...TTTTCCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
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| CDS-3UTR GCA 90 bp | AAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCGCAGGACGGTGCCATaGAGCACGGCCCCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KKREVTLLQFVISSRGQGRRTVP*STAPSS Trigger: GCTGCTGGGGGCCGTGCTGCATGGCACCGTCCTGCG...GCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
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| CDS-3UTR GCA 90 bp | AAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCGTGCCGCAGGACGGTaGCATGCAGCACGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KKREVTLLQFVISSRGQGRAAGR*HAARPP Trigger: TGGGGGCCGTGCTGCATGGCACCGTCCTGCGGCACG...GCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
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| CDS-3UTR GCA 90 bp | ACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGGAAGTCCGTCCTTCCTaGAGGGCCCAACTCCACGTA | + |
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Preference number: 4 (lower is better) Translates to: TLLQFVISSRGQGPLLSGEVRPS*RAQLHV Trigger: TACGTGGAGTTGGGCCCTGCAGGAAGGACGGACTTC...CCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
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| CDS-3UTR GCA 90 bp | AGGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTTTCTGTTTCACTCTTaGGTCACACCCAGCTACTAC | + |
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Preference number: 4 (lower is better) Translates to: RKPWLPGFLFHSCVTPSYFLFHS*VTPSYY Trigger: GTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAA...GTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | ACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTTATCATAGATTCTTGTaGGGTCAAAGGGGCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TVAARLSVSLLRHTQLLPYHRFL*GQRGSQ Trigger: CTGACTGCCCCTTTGACCCCACAAGAATCTATGATA...AGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR TCA 90 bp | GCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGCCATATTCACACCGTTGGCCACAGTaGGTGACACAGCAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AALQDHWSGSSVTLVPYSHRWPQ*VTQQEG Trigger: TCCTTCTTGCTGTGTCACTCACTGTGGCCAACGGTG...TGAATATGGCACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543753.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGCCTCCCCTGCAGACATaGGCAAAGAAGGGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLQFVISSRGQGPLLSGPPLQT*AKKGSR Trigger: TCTGGATCCCTTCTTTGCTCATGTCTGCAGGGGAGG...CCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
||
| CDS-3UTR TCA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTCAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHIHNALTLIPGNRGCQAQLHVE*VQPHSS Trigger: ACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTG...AGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
||
| CDS-3UTR TCA 90 bp | CAACCCAGGTCAGAGGGGAAAGCAGCATGGCAAGACCTAGACCCAGTTCTAAGAAACCCAACTTCTCTGTaGTGCCCGGATTTCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QPRSEGKAAWQDLDPVLRNPTSL*CPDFLI Trigger: AATCAAGAAATCCGGGCATCACAGAGAAGTTGGGTT...TCTTAGAACTGGGTCTAGGTCTTGCCATGCTGCTTTCCCCTCTGACCTGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494572.1 |
||
| CDS-3UTR GCA 90 bp | AAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTCGAAAGCGCAGAGACTaGAGCGCCTCATCCCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KRSYFITICYLIPRSGPLRKRRD*SASSRP Trigger: CGGACGGGATGAGGCGCTGCAGTCTCTGCGCTTTCG...AAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000453171.5 |
||
| CDS-3UTR GCA 90 bp | AGAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGCGCAGGACGGTGCCATaGAGCACGGCCCCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKEKLLYYNLLSHPEVRRRTVP*STAPSS Trigger: GCTGCTGGGGGCCGTGCTGCATGGCACCGTCCTGCG...CCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
||
| CDS-3UTR GCA 90 bp | AGAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGCGTGCCGCAGGACGGTaGCATGCAGCACGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRKEKLLYYNLLSHPEVRRAAGR*HAARPP Trigger: TGGGGGCCGTGCTGCATGGCACCGTCCTGCGGCACG...CCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
||
| CDS-3UTR GCA 90 bp | CATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTTTCGAAGTCCGTCCTTCCTaGAGGGCCCAACTCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: HIHNALTLIPGNRGCQAFEVRPS*RAQLHV Trigger: TACGTGGAGTTGGGCCCTGCAGGAAGGACGGACTTC...GAAAGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCCAGGACCCAGTGCAGTaGAGGGCGAAGAAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKLLYYNLLSHPEVRAPCQDPVQ*RAKKVP Trigger: AGGAACCTTCTTCGCCCTCCACTGCACTGGGTCCTG...GCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGTGGCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGAGGATCCAGCAGTCCTaGGTGGCAGTCAGCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVAALQDHWSGSSVTLVRIQQS*VAVSNK Trigger: CTTATTGCTGACTGCCACCCAGGACTGCTGGATCCT...CACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGCCACAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543753.5 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCGGCCCCTCATCCAGTaGTACCAGAGGATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: REVTLLQFVISSRGQGPLRPLIQ*YQRIQQ Trigger: CTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCG...CAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGGTTGGCCACAGTGAGTaGCACAGCAAGAAGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: REVTLLQFVISSRGQGPLVGHSE*HSKKEA Trigger: GGCCTCCTTCTTGCTGTGTCACTCACTGTGGCCAAC...CAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR TCA 90 bp | GTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGTTGGCCACAGTGAGTaGCACAGCAAGAAGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLLQFVISSRGQGPLLSVGHSE*HSKKEA Trigger: GGCCTCCTTCTTGCTGTGTCACTCACTGTGGCCAAC...ACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR TCA 90 bp | TTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGAAACAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLQFVISSRGQGPLLSGKQLHVE*VQPHSS Trigger: ACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTG...TTTCCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
||
| CDS-3UTR GCA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTCCAGGAAACCGTGGCTaGCAGGCTTTCTGTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CHIHNALTLIPGNRGCQAPGNRG*QAFCFT Trigger: AGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCTGG...AGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
||
| CDS-3UTR GCA 90 bp | TTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGTCTCGGAACAGCACCTaGTGGACAGAGGGGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LLYYNLLSHPEVRAPCLVSRNST*WTEGRT Trigger: GGTTCTCCCCTCTGTCCAGCAGGTGCTGTTCCGAGA...CACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494572.1 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCGAAAGCGCAGAGACTaGAGCGCCTCATCCCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EEKRSYFITICYLIPRSGRKRRD*SASSRP Trigger: CGGACGGGATGAGGCGCTGCAGTCTCTGCGCTTTCG...CCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000453171.5 |
||
| CDS-3UTR GCA 90 bp | GAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCGAAGTCCGTCCTTCCTaGAGGGCCCAACTCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKRSYFITICYLIPRSGPEVRPS*RAQLHV Trigger: TACGTGGAGTTGGGCCCTGCAGGAAGGACGGACTTC...GGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR GCA 90 bp | AAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGAAGTCCGTCCTTCCTaGAGGGCCCAACTCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLLYYNLLSHPEVRAPCLEVRPS*RAQLHV Trigger: TACGTGGAGTTGGGCCCTGCAGGAAGGACGGACTTC...TAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
||
| CDS-3UTR GCA 90 bp | CGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTGTAGCTGCTCATTTTCCTaGCTTTTACATTTAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGCQAFCFTLASHPATTCSCSFS*LLHLGD Trigger: ATCTCCTAAATGTAAAAGGCAGGAAAATGAGCAGCT...ACAGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCAGCAGCAGGTTCACGTaGCCCACCAAGATCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RKEKLLYYNLLSHPEVRASSRFT*PTKISA Trigger: CGCGCTGATCTTGGTGGGCCACGTGAACCTGCTGCT...GGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCCAGGACCCAGTGCAGTaGAGGGCGAAGAAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KREVTLLQFVISSRGQGPQDPVQ*RAKKVP Trigger: AGGAACCTTCTTCGCCCTCCACTGCACTGGGTCCTG...GGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | AACTTCTCTGTGATGCCCGGATTTCTTGATTTTGATCCAGTAGCTGCTCATTTTCAGGACCCAGTGCAGTaGAGGGCGAAGAAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NFSVMPGFLDFDPVAAHFQDPVQ*RAKKVP Trigger: AGGAACCTTCTTCGCCCTCCACTGCACTGGGTCCTG...AAAATGAGCAGCTACTGGATCAAAATCAAGAAATCCGGGCATCACAGAGAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCGGCCCCTCATCCAGTaGTACCAGAGGATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKEKLLYYNLLSHPEVRARPLIQ*YQRIQQ Trigger: CTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCG...GGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGGCTGTATCATAGATTCTTGTGGGGTCAAAGGGGCAGTCAGTATGTCCTATCATAGATTCTTGTaGGGTCAAAGGGGCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGCIIDSCGVKGAVSMSYHRFL*GQRGSQ Trigger: CTGACTGCCCCTTTGACCCCACAAGAATCTATGATA...GGACATACTGACTGCCCCTTTGACCCCACAAGAATCTATGATACAGCCTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGTGGCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGGCCTTACAGGATCATTaGTCTGGTAGCTCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSVAALQDHWSGSSVTLVALQDH*SGSSVT Trigger: AGTGACTGAGCTACCAGACCAATGATCCTGTAAGGC...CACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGCCACAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
||
| CDS-3UTR TCA 90 bp | GAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCCGAGCCGACAGAGATaGCATTGGCTACGGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EKRSYFITICYLIPRSGPPSRQR*HWLRCT Trigger: AGTACACCGTAGCCAATGTCATCTCTGTCGGCTCGG...GGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTCACCGTTGGCCACAGTaGGTGACACAGCAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEKLLYYNLLSHPEVRAPHRWPQ*VTQQEG Trigger: TCCTTCTTGCTGTGTCACTCACTGTGGCCAACGGTG...AGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCCACCGTTGGCCACAGTaGGTGACACAGCAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KREVTLLQFVISSRGQGPHRWPQ*VTQQEG Trigger: TCCTTCTTGCTGTGTCACTCACTGTGGCCAACGGTG...GGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTCCTCCCCTGCAGACATaGGCAAAGAAGGGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEKLLYYNLLSHPEVRAPPPLQT*AKKGSR Trigger: TCTGGATCCCTTCTTTGCTCATGTCTGCAGGGGAGG...AGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTCCTCCCCTGCAGACATaGGCAAAGAAGGGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRSYFITICYLIPRSGPLPPLQT*AKKGSR Trigger: TCTGGATCCCTTCTTTGCTCATGTCTGCAGGGGAGG...AAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTCAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KEKLLYYNLLSHPEVRAPQLHVE*VQPHSS Trigger: ACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTG...AGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGTCCTCTAGCTGCCCCTaGAGTCCGTCCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEKRSYFITICYLIPRSGSSSCP*SPSFLQ Trigger: CTGCAGGAAGGACGGACTTCAGGGGCAGCTAGAGGA...CCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGAGCAGCAGGTTCACGTaGCCCACCAAGATCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EEKRSYFITICYLIPRSGSSRFT*PTKISA Trigger: CGCGCTGATCTTGGTGGGCCACGTGAACCTGCTGCT...CCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
||
| CDS-3UTR CCA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTGCCTTACAGGATCATTaGTCTGGTAGCTCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CHIHNALTLIPGNRGCQAALQDH*SGSSVT Trigger: AGTGACTGAGCTACCAGACCAATGATCCTGTAAGGC...AGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGAACCCAACTTCTCTGTaGTGCCCGGATTTCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLLQFVISSRGQGPLLSGNPTSL*CPDFLI Trigger: AATCAAGAAATCCGGGCATCACAGAGAAGTTGGGTT...CCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTTACAGGATCATTGGTCTGGTAGCTCAGTCACTTTAGTGCCATATTCAAACCCAACTTCTCTGTaGTGCCCGGATTTCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: AALQDHWSGSSVTLVPYSNPTSL*CPDFLI Trigger: AATCAAGAAATCCGGGCATCACAGAGAAGTTGGGTT...TGAATATGGCACTAAAGTGACTGAGCTACCAGACCAATGATCCTGTAAGGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
||
| CDS-3UTR GCA 90 bp | AGCATGGCAAGACCTAGACCCAGTTCTAAGAGCACTTCCTTGTCCCCGCTCTTAAGCTGCTCATTTTCCTaGCTTTTACATTTAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMARPRPSSKSTSLSPLLSCSFS*LLHLGD Trigger: ATCTCCTAAATGTAAAAGGCAGGAAAATGAGCAGCT...TAAGAGCGGGGACAAGGAAGTGCTCTTAGAACTGGGTCTAGGTCTTGCCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000494572.1 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGTCCAGCAGTCCTGGGTaGCAGTCAGCAATAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKRSYFITICYLIPRSGSSSPG*QSAIRR Trigger: CCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGA...CCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTAGGATCCAGCAGTCCTaGGTGGCAGTCAGCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRSYFITICYLIPRSGPLRIQQS*VAVSNK Trigger: CTTATTGCTGACTGCCACCCAGGACTGCTGGATCCT...AAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGTATCATAGATTCTTGTaGGGTCAAAGGGGCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLQFVISSRGQGPLLSGYHRFL*GQRGSQ Trigger: CTGACTGCCCCTTTGACCCCACAAGAATCTATGATA...CCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCGAGCCGACAGAGATaGCATTGGCTACGGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EEKRSYFITICYLIPRSGPSRQR*HWLRCT Trigger: AGTACACCGTAGCCAATGTCATCTCTGTCGGCTCGG...CCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCAACTCCACGTAGAGTaGGTGCAGCCACACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKREVTLLQFVISSRGQGQLHVE*VQPHSS Trigger: ACTGCTGTGTGGCTGCACTCACTCTACGTGGAGTTG...GCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
||
| CDS-3UTR GCA 90 bp | CATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTTTCTTTCTGTTTCACTCTTaGGTCACACCCAGCTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: HIHNALTLIPGNRGCQAFFLFHS*VTPSYY Trigger: GTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAA...GAAAGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR CCA 90 bp | AGAAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGTCCAGCAGTCCTGGGTaGCAGTCAGCAATAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RRKEKLLYYNLLSHPEVRSSSPG*QSAIRR Trigger: CCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGA...CCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000407293.5 |
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| CDS-3UTR CCA 90 bp | AAGAAAAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCAGGATCCAGCAGTCCTaGGTGGCAGTCAGCAATAAG | + |
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Preference number: 4 (lower is better) Translates to: KKREVTLLQFVISSRGQGRIQQS*VAVSNK Trigger: CTTATTGCTGACTGCCACCCAGGACTGCTGGATCCT...GCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
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| CDS-3UTR TCA 90 bp | AAGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTAACCCAACTTCTCTGTaGTGCCCGGATTTCTTGATT | + |
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Preference number: 4 (lower is better) Translates to: KRSYFITICYLIPRSGPLNPTSL*CPDFLI Trigger: AATCAAGAAATCCGGGCATCACAGAGAAGTTGGGTT...AAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
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| CDS-3UTR GCA 90 bp | TTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGAGCTGCTCATTTTCCTaGCTTTTACATTTAGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLYYNLLSHPEVRAPCLVSCSFS*LLHLGD Trigger: ATCTCCTAAATGTAAAAGGCAGGAAAATGAGCAGCT...CACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
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| CDS-3UTR GCA 90 bp | AGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTAGCTGCTCATTTTCCTaGCTTTTACATTTAGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: RSYFITICYLIPRSGPLASCSFS*LLHLGD Trigger: ATCTCCTAAATGTAAAAGGCAGGAAAATGAGCAGCT...AGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
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| CDS-3UTR GCA 90 bp | GAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGCTGCTCATTTTCCTaGCTTTTACATTTAGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: EVTLLQFVISSRGQGPLLSCSFS*LLHLGD Trigger: ATCTCCTAAATGTAAAAGGCAGGAAAATGAGCAGCT...AAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000494572.1 |
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| CDS CCA 90 bp | CGTGGCCCACCAAGATCAGCGCGAGGCCCACACGCATCAGCCGCCTaGGCCCCCGGGCGGCGTCTGCAAAGCACGGGGGAGGGCAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: RGPPRSARGPHASAA*APGRRLQSTGEGRV Trigger: AACCCTGCCCTCCCCCGTGCTTTGCAGACGCCGCCCGGGGGCCCAGGCGGCTGATGCGTGTGGGCCTCGCGCTGATCTTGGTGGGCCACG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000407293.5 |
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| CDS CCA 90 bp | GTCCCACGGAAACGCTCTGTGGAAGACACAAAGCCTTTGGCCTGCTaGGCTCTCCGGGAGCCCGGCCCCCGCCCGGGTCGCCTGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: VPRKRSVEDTKPLAC*ALREPGPRPGRLPR Trigger: GCGCGGCAGGCGACCCGGGCGGGGGCCGGGCTCCCGGAGAGCCCAGCAGGCCAAAGGCTTTGTGTCTTCCACAGAGCGTTTCCGTGGGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464699.5 |
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| CDS GCA 90 bp | GTGACAGCGCCGCGGGGATTGGCCACGTGCCGCAGGACGGTGCCATaGAGCACGGCCCCCAGCAGCAGGTTCACGTGGCCCACCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: VTAPRGLATCRRTVP*STAPSSRFTWPTKI Trigger: GATCTTGGTGGGCCACGTGAACCTGCTGCTGGGGGCCGTGCTGCATGGCACCGTCCTGCGGCACGTGGCCAATCCCCGCGGCGCTGTCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000543753.5 |
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| CDS CCA 90 bp | CCCGGCCCCTCATCCAGTGGTACCAGAGGATCCAGCAGTCCTGGGTaGCAGTCAGCAATAAGGCGGCGGCCACCGTTGGCCACAGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: PGPSSSGTRGSSSPG*QSAIRRRPPLATVS Trigger: ACTCACTGTGGCCAACGGTGGCCGCCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000464699.5 ENST00000543753.5 |
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| CDS CCA 90 bp | ATGTCCCGGCCCCTCATCCAGTGGTACCAGAGGATCCAGCAGTCCTaGGTGGCAGTCAGCAATAAGGCGGCGGCCACCGTTGGCCACAGT | + |
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Preference number: 5 (lower is better) Translates to: MSRPLIQWYQRIQQS*VAVSNKAAATVGHS Trigger: ACTGTGGCCAACGGTGGCCGCCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGATCCTCTGGTACCACTGGATGAGGGGCCGGGACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000464699.5 ENST00000543753.5 |
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| CDS-3UTR CAA 90 bp | TCAGAGGGGAAAGCAGCATGGCAAGACCTAGACCCAGTTCTAAGAGCACTTCCTTCTAAGAGCACTTCCTaGTCCCCGCTCTTACCCGGG | + |
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Preference number: 5 (lower is better) Translates to: SEGKAAWQDLDPVLRALPSKSTS*SPLLPG Trigger: CCCGGGTAAGAGCGGGGACAAGGAAGTGCTCTTAGA...AGGAAGTGCTCTTAGAACTGGGTCTAGGTCTTGCCATGCTGCTTTCCCCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494572.1 |
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| CDS-3UTR CAA 90 bp | AGGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACCTGTATCATAGATTCTaGTGGGGTCAAAGGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RKPWLPGFLFHSCVTPSYLYHRF*WGQRGS Trigger: ACTGCCCCTTTGACCCCACAAGAATCTATGATACAG...GTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543753.5 |
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| CDS-3UTR CAA 90 bp | TGCCATATTCATAATGCTTTGACTTTAATCCCAGGAAACCGTGGCTGCCAGGCTCTTTCTGTTTCACTCTaGCGTCACACCCAGCTACTA | + |
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Preference number: 5 (lower is better) Translates to: CHIHNALTLIPGNRGCQALSVSL*RHTQLL Trigger: TAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAG...AGCCTGGCAGCCACGGTTTCCTGGGATTAAAGTCAAAGCATTATGAATATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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| CDS-3UTR CAA 90 bp | TTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTTAGTGGGAAACTGTATCATAGATTCTaGTGGGGTCAAAGGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LLQFVISSRGQGPLLSGKLYHRF*WGQRGS Trigger: ACTGCCCCTTTGACCCCACAAGAATCTATGATACAG...TTTCCCACTAAGCAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTTACTTTATTACAATTTGTTATCTCATCCCGAGGTCAGGGCCCCTTGCTGTATCATAGATTCTaGTGGGGTCAAAGGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: REVTLLQFVISSRGQGPLLYHRF*WGQRGS Trigger: ACTGCCCCTTTGACCCCACAAGAATCTATGATACAG...CAAGGGGCCCTGACCTCGGGATGAGATAACAAATTGTAATAAAGTAACTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 |
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| CDS GCA 72 bp | GCCTGGGCCCCCGGGCGGCGTCGAAAGCGCAGAGACTaGAGCGCCTCATCCCGTCCGCCGCGCCAGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: AWAPGRRRKRRD*SASSRPPRQPQ Trigger: CTGCGGCTGGCGCGGCGGACGGGATGAGGCGCTGCAGTCTCTGCGCTTTCGACGCCGCCCGGGGGCCCAGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000543753.5 |
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| CDS GCA 72 bp | CCGCGGGGATTGGCCACGTGCCGCAGGACGGTGCCATaGAGCACGGCCCCCAGCAGCAGGTTCACGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PRGLATCRRTVP*STAPSSRFTWP Trigger: GGGCCACGTGAACCTGCTGCTGGGGGCCGTGCTGCATGGCACCGTCCTGCGGCACGTGGCCAATCCCCGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000543753.5 |
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| CDS CCA 72 bp | CCAAGATCAGCGCGAGGCCCACACGCATCAGCCGCCTaGGCCCCCGGGCGGCGTCTGCAAAGCACGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PRSARGPHASAA*APGRRLQSTGE Trigger: CTCCCCCGTGCTTTGCAGACGCCGCCCGGGGGCCCAGGCGGCTGATGCGTGTGGGCCTCGCGCTGATCTTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000407293.5 |
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| CDS CCA 72 bp | CCAAGATCAGCGCGAGGCCCACACGCATCAGCCGCCTaGGCCCCCGGGCGGCGTCGAAAGCGCAGAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: PRSARGPHASAA*APGRRRKRRDC Trigger: GCAGTCTCTGCGCTTTCGACGCCGCCCGGGGGCCCAGGCGGCTGATGCGTGTGGGCCTCGCGCTGATCTTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000288873.7 ENST00000543753.5 |
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| CDS CAA 72 bp | GCTACGGTGTACTCCGGCGTGACAGCGCCGCGGGGATaGGCCACGTGCCGCAGGACGGTGCCATGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: ATVYSGVTAPRG*ATCRRTVPCST Trigger: CGTGCTGCATGGCACCGTCCTGCGGCACGTGGCCAATCCCCGCGGCGCTGTCACGCCGGAGTACACCGTAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000543753.5 |
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| CDS CAA 90 bp | ATGACATTGGCTACGGTGTACTCCGGCGTGACAGCGCCGCGGGGATaGGCCACGTGCCGCAGGACGGTGCCATGCAGCACGGCCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: MTLATVYSGVTAPRG*ATCRRTVPCSTAPS Trigger: GCTGGGGGCCGTGCTGCATGGCACCGTCCTGCGGCACGTGGCCAATCCCCGCGGCGCTGTCACGCCGGAGTACACCGTAGCCAATGTCAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000543753.5 |
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| CDS GCA 72 bp | CGGAAACGCTCTGTGGAAGACACAAAGCCTTTGGCCTaGTGGGCTCTCCGGGAGCCCGGCCCCCGCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: RKRSVEDTKPLA*WALREPGPRPG Trigger: ACCCGGGCGGGGGCCGGGCTCCCGGAGAGCCCAGCAGGCCAAAGGCTTTGTGTCTTCCACAGAGCGTTTCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464699.5 |
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| CDS CCA 72 bp | AAACGCTCTGTGGAAGACACAAAGCCTTTGGCCTGCTaGGCTCTCCGGGAGCCCGGCCCCCGCCCGGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: KRSVEDTKPLAC*ALREPGPRPGR Trigger: GCGACCCGGGCGGGGGCCGGGCTCCCGGAGAGCCCAGCAGGCCAAAGGCTTTGTGTCTTCCACAGAGCGTTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464699.5 |
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| CDS CCA 72 bp | TCATCCAGTGGTACCAGAGGATCCAGCAGTCCTGGGTaGCAGTCAGCAATAAGGCGGCGGCCACCGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSGTRGSSSPG*QSAIRRRPPLA Trigger: GGCCAACGGTGGCCGCCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGATCCTCTGGTACCACTGGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000464699.5 ENST00000543753.5 |
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| CDS CCA 72 bp | CCCCTCATCCAGTGGTACCAGAGGATCCAGCAGTCCTaGGTGGCAGTCAGCAATAAGGCGGCGGCCACCGTT | + |
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Preference number: 6 (lower is better) Translates to: PLIQWYQRIQQS*VAVSNKAAATV Trigger: AACGGTGGCCGCCGCCTTATTGCTGACTGCCACCCAGGACTGCTGGATCCTCTGGTACCACTGGATGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000288873.7 ENST00000407293.5 ENST00000453171.5 ENST00000464699.5 ENST00000543753.5 |
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| CDS CAA 72 bp | CAGGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTaGCGTCACACCCAGCTACTACCTGTCCTAAACCCA | + |
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Preference number: 6 (lower is better) Translates to: QETVAARLSVSL*RHTQLLPVLNP Trigger: TGGGTTTAGGACAGGTAGTAGCTGGGTGTGACGCAAGAGTGAAACAGAAAGCCTGGCAGCCACGGTTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452499.1 ENST00000543753.5 |
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