Pregenerated sensors for KRTCAP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000163463Ensembl transcript IDs: ENST00000463527.5, ENST00000482246.5, ENST00000487350.5, ENST00000490672.2, ENST00000491084.5
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | TCCCTCCGGCAAGCTACGGGCAGATCAGCCGGTCCGGAAGCTCGGTaGGCCGACCCCCTCCAAGAACTCCCGGGACTGCAGCCACACGCC | + |
Preference number: 5 (lower is better) Translates to: SLRQATGRSAGPEAR*ADPLQELPGLQPHA Trigger: GGCGTGTGGCTGCAGTCCCGGGAGTTCTTGGAGGGGGTCGGCCCACCGAGCTTCCGGACCGGCTGATCTGCCCGTAGCTTGCCGGAGGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487350.5 |
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CDS CCA 90 bp | CGGACACCCCGAACCCTCCCGTCCGGTGGAAATGCCCGCTCCCGGTaGAACCCAGGACACGTCAGCTCTGTCGGGAGAGGACGAGGAAAG | + |
Preference number: 5 (lower is better) Translates to: RTPRTLPSGGNARSR*NPGHVSSVGRGRGK Trigger: CTTTCCTCGTCCTCTCCCGACAGAGCTGACGTGTCCTGGGTTCCACCGGGAGCGGGCATTTCCACCGGACGGGAGGGTTCGGGGTGTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487350.5 |
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CDS GCA 90 bp | CGTTCTCCTCTTTCTTCCTCTCAGTGCCTGGACGCAGCGCCCTCTTaGGACAGGGAGGAAATAATGCGTCGAGGGGGCATCCTCGGCCAC | + |
Preference number: 5 (lower is better) Translates to: RSPLSSSQCLDAAPS*DREEIMRRGGILGH Trigger: GTGGCCGAGGATGCCCCCTCGACGCATTATTTCCTCCCTGTCGCAAGAGGGCGCTGCGTCCAGGCACTGAGAGGAAGAAAGAGGAGAACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491084.5 |
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CDS GCA 90 bp | AAGGACCGCCTCCCAGCGAATAGATGCAAAACATCAGCCCAAATTTaGCTGTTCCCCTCAAACCTTCCCTGGGAGCTGGCCAGAAGGTAC | + |
Preference number: 5 (lower is better) Translates to: KDRLPANRCKTSAQI*LFPSNLPWELARRY Trigger: GTACCTTCTGGCCAGCTCCCAGGGAAGGTTTGAGGGGAACAGGCAAATTTGGGCTGATGTTTTGCATCTATTCGCTGGGAGGCGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS GCA 90 bp | GCTGCTTCTTCTGGTGGGAACAAGGACCGCCTCCCAGCGAATAGATaGAAAACATCAGCCCAAATTTGCCTGTTCCCCTCAAACCTTCCC | + |
Preference number: 5 (lower is better) Translates to: AASSGGNKDRLPANR*KTSAQICLFPSNLP Trigger: GGGAAGGTTTGAGGGGAACAGGCAAATTTGGGCTGATGTTTTGCATCTATTCGCTGGGAGGCGGTCCTTGTTCCCACCAGAAGAAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS TCA 90 bp | AACCTAACAGAGAGAAGTCCCGGGGCTACTGGATGGAAAGAACTCTaGAGCCTGCAAAAGGGCTATGCGGAGAAAGCAAGTCCTAGAGGG | + |
Preference number: 5 (lower is better) Translates to: NLTERSPGATGWKEL*SLQKGYAEKASPRG Trigger: CCCTCTAGGACTTGCTTTCTCCGCATAGCCCTTTTGCAGGCTTCAGAGTTCTTTCCATCCAGTAGCCCCGGGACTTCTCTCTGTTAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS GCA 90 bp | CCTCAAACCTTCCCTGGGAGCTGGCCAGAAGGTACCAAAGTTTCTTaGTTTCAAAGGCCTTCTCTTCCAGCTCCAACTCCAGGAGCTATA | + |
Preference number: 5 (lower is better) Translates to: PQTFPGSWPEGTKVS*FQRPSLPAPTPGAI Trigger: TATAGCTCCTGGAGTTGGAGCTGGAAGAGAAGGCCTTTGAAAGCAAGAAACTTTGGTACCTTCTGGCCAGCTCCCAGGGAAGGTTTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CCA 90 bp | TGCAAAACATCAGCCCAAATTTGCCTGTTCCCCTCAAACCTTCCCTaGGAGCTGGCCAGAAGGTACCAAAGTTTCTTGCTTTCAAAGGCC | + |
Preference number: 5 (lower is better) Translates to: CKTSAQICLFPSNLP*ELARRYQSFLLSKA Trigger: GGCCTTTGAAAGCAAGAAACTTTGGTACCTTCTGGCCAGCTCCCAGGGAAGGTTTGAGGGGAACAGGCAAATTTGGGCTGATGTTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CCA 90 bp | CCTGGACACAGGTTGGAGGGCAGAGTGCTTGGATCTACTTCTTCATaGGGGCAGGAAAGGATTTTAGGTTACCTGGAATATGATGGGAGA | + |
Preference number: 5 (lower is better) Translates to: PGHRLEGRVLGSTSS*GQERILGYLEYDGR Trigger: TCTCCCATCATATTCCAGGTAACCTAAAATCCTTTCCTGCCCCCATGAAGAAGTAGATCCAAGCACTCTGCCCTCCAACCTGTGTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS GCA 90 bp | TCAAAGGCCTTCTCTTCCAGCTCCAACTCCAGGAGCTATACAAGGTaGAGAATCGAAAAGCGTCATCTGTCTTCAGACAGCTTCAGTAAA | + |
Preference number: 5 (lower is better) Translates to: SKAFSSSSNSRSYTR*RIEKRHLSSDSFSK Trigger: TTTACTGAAGCTGTCTGAAGACAGATGACGCTTTTCGATTCTGCACCTTGTATAGCTCCTGGAGTTGGAGCTGGAAGAGAAGGCCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463527.5 ENST00000490672.2 |
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CDS GCA 72 bp | GCCCCGGACACCCCGAACCCTCCCGTCCGGTGGAAATaGCCGCTCCCGGTGGAACCCAGGACACGTCAGCTC | + |
Preference number: 6 (lower is better) Translates to: APDTPNPPVRWK*PLPVEPRTRQL Trigger: GAGCTGACGTGTCCTGGGTTCCACCGGGAGCGGGCATTTCCACCGGACGGGAGGGTTCGGGGTGTCCGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487350.5 |
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CDS CCA 72 bp | CAAGCTACGGGCAGATCAGCCGGTCCGGAAGCTCGGTaGGCCGACCCCCTCCAAGAACTCCCGGGACTGCAG | + |
Preference number: 6 (lower is better) Translates to: QATGRSAGPEAR*ADPLQELPGLQ Trigger: CTGCAGTCCCGGGAGTTCTTGGAGGGGGTCGGCCCACCGAGCTTCCGGACCGGCTGATCTGCCCGTAGCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487350.5 |
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CDS CCA 72 bp | CGAACCCTCCCGTCCGGTGGAAATGCCCGCTCCCGGTaGAACCCAGGACACGTCAGCTCTGTCGGGAGAGGA | + |
Preference number: 6 (lower is better) Translates to: RTLPSGGNARSR*NPGHVSSVGRG Trigger: TCCTCTCCCGACAGAGCTGACGTGTCCTGGGTTCCACCGGGAGCGGGCATTTCCACCGGACGGGAGGGTTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487350.5 |
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CDS CAA 90 bp | GCGTTCTCCTCTTTCTTCCTCTCAGTGCCTGGACGCAGCGCCCTCTaGCGACAGGGAGGAAATAATGCGTCGAGGGGGCATCCTCGGCCA | + |
Preference number: 6 (lower is better) Translates to: AFSSFFLSVPGRSAL*RQGGNNASRGHPRP Trigger: TGGCCGAGGATGCCCCCTCGACGCATTATTTCCTCCCTGTCGCAAGAGGGCGCTGCGTCCAGGCACTGAGAGGAAGAAAGAGGAGAACGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491084.5 |
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CDS CAA 72 bp | GACACGTCAGCTCTGTCGGGAGAGGACGAGGAAAGCTaGTCCACCCAAACCCCGACCCCCTCTAGGACTTCC | + |
Preference number: 6 (lower is better) Translates to: DTSALSGEDEES*STQTPTPSRTS Trigger: GGAAGTCCTAGAGGGGGTCGGGGTTTGGGTGGACAAGCTTTCCTCGTCCTCTCCCGACAGAGCTGACGTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487350.5 |
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CDS GCA 72 bp | CTTTCTTCCTCTCAGTGCCTGGACGCAGCGCCCTCTTaGGACAGGGAGGAAATAATGCGTCGAGGGGGCATC | + |
Preference number: 6 (lower is better) Translates to: LSSSQCLDAAPS*DREEIMRRGGI Trigger: GATGCCCCCTCGACGCATTATTTCCTCCCTGTCGCAAGAGGGCGCTGCGTCCAGGCACTGAGAGGAAGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491084.5 |
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CDS GCA 72 bp | GGTGAAGACAGAAAGGTCATGGCACCAGTGGGCATCTaGCAGCCTGGTGCCTCAGTGAGCGAGAACACGAAG | + |
Preference number: 6 (lower is better) Translates to: GEDRKVMAPVGI*QPGASVSENTK Trigger: CTTCGTGTTCTCGCTCACTGAGGCACCAGGCTGGCAGATGCCCACTGGTGCCATGACCTTTCTGTCTTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482246.5 |
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CDS CAA 72 bp | TCTTTCTTCCTCTCAGTGCCTGGACGCAGCGCCCTCTaGCGACAGGGAGGAAATAATGCGTCGAGGGGGCAT | + |
Preference number: 6 (lower is better) Translates to: SFFLSVPGRSAL*RQGGNNASRGH Trigger: ATGCCCCCTCGACGCATTATTTCCTCCCTGTCGCAAGAGGGCGCTGCGTCCAGGCACTGAGAGGAAGAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491084.5 |
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CDS CAA 72 bp | ATTAAGCTGGGTGACCAGTGGTGGAAGTTGAAGGCCTaGCTCCCTGGACACAGGTTGGAGGGCAGAGTGCTT | + |
Preference number: 6 (lower is better) Translates to: IKLGDQWWKLKA*LPGHRLEGRVL Trigger: AAGCACTCTGCCCTCCAACCTGTGTCCAGGGAGCAAGGCCTTCAACTTCCACCACTGGTCACCCAGCTTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS GCA 72 bp | CTCCCAGCGAATAGATGCAAAACATCAGCCCAAATTTaGCTGTTCCCCTCAAACCTTCCCTGGGAGCTGGCC | + |
Preference number: 6 (lower is better) Translates to: LPANRCKTSAQI*LFPSNLPWELA Trigger: GGCCAGCTCCCAGGGAAGGTTTGAGGGGAACAGGCAAATTTGGGCTGATGTTTTGCATCTATTCGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS TCA 72 bp | GAGAGAAGTCCCGGGGCTACTGGATGGAAAGAACTCTaGAGCCTGCAAAAGGGCTATGCGGAGAAAGCAAGT | + |
Preference number: 6 (lower is better) Translates to: ERSPGATGWKEL*SLQKGYAEKAS Trigger: ACTTGCTTTCTCCGCATAGCCCTTTTGCAGGCTTCAGAGTTCTTTCCATCCAGTAGCCCCGGGACTTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS GCA 72 bp | TCTGGTGGGAACAAGGACCGCCTCCCAGCGAATAGATaGAAAACATCAGCCCAAATTTGCCTGTTCCCCTCA | + |
Preference number: 6 (lower is better) Translates to: SGGNKDRLPANR*KTSAQICLFPS Trigger: TGAGGGGAACAGGCAAATTTGGGCTGATGTTTTGCATCTATTCGCTGGGAGGCGGTCCTTGTTCCCACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CCA 72 bp | CTTGCTCCCTGGACACAGGTTGGAGGGCAGAGTGCTTaGATCTACTTCTTCATGGGGGCAGGAAAGGATTTT | + |
Preference number: 6 (lower is better) Translates to: LAPWTQVGGQSA*IYFFMGAGKDF Trigger: AAAATCCTTTCCTGCCCCCATGAAGAAGTAGATCCAAGCACTCTGCCCTCCAACCTGTGTCCAGGGAGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CAA 72 bp | CTTCCCTGGGAGCTGGCCAGAAGGTACCAAAGTTTCTaGCTTTCAAAGGCCTTCTCTTCCAGCTCCAACTCC | + |
Preference number: 6 (lower is better) Translates to: LPWELARRYQSF*LSKAFSSSSNS Trigger: GGAGTTGGAGCTGGAAGAGAAGGCCTTTGAAAGCAAGAAACTTTGGTACCTTCTGGCCAGCTCCCAGGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CAA 90 bp | CCCTCAAACCTTCCCTGGGAGCTGGCCAGAAGGTACCAAAGTTTCTaGCTTTCAAAGGCCTTCTCTTCCAGCTCCAACTCCAGGAGCTAT | + |
Preference number: 6 (lower is better) Translates to: PSNLPWELARRYQSF*LSKAFSSSSNSRSY Trigger: ATAGCTCCTGGAGTTGGAGCTGGAAGAGAAGGCCTTTGAAAGCAAGAAACTTTGGTACCTTCTGGCCAGCTCCCAGGGAAGGTTTGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CAA 90 bp | AGTCAATTCATTAAGCTGGGTGACCAGTGGTGGAAGTTGAAGGCCTaGCTCCCTGGACACAGGTTGGAGGGCAGAGTGCTTGGATCTACT | + |
Preference number: 6 (lower is better) Translates to: SQFIKLGDQWWKLKA*LPGHRLEGRVLGST Trigger: AGTAGATCCAAGCACTCTGCCCTCCAACCTGTGTCCAGGGAGCAAGGCCTTCAACTTCCACCACTGGTCACCCAGCTTAATGAATTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS GCA 72 bp | TTCCCTGGGAGCTGGCCAGAAGGTACCAAAGTTTCTTaGTTTCAAAGGCCTTCTCTTCCAGCTCCAACTCCA | + |
Preference number: 6 (lower is better) Translates to: FPGSWPEGTKVS*FQRPSLPAPTP Trigger: TGGAGTTGGAGCTGGAAGAGAAGGCCTTTGAAAGCAAGAAACTTTGGTACCTTCTGGCCAGCTCCCAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CCA 72 bp | TCAGCCCAAATTTGCCTGTTCCCCTCAAACCTTCCCTaGGAGCTGGCCAGAAGGTACCAAAGTTTCTTGCTT | + |
Preference number: 6 (lower is better) Translates to: SAQICLFPSNLP*ELARRYQSFLL Trigger: AAGCAAGAAACTTTGGTACCTTCTGGCCAGCTCCCAGGGAAGGTTTGAGGGGAACAGGCAAATTTGGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CCA 72 bp | GACAATGAGAGTCAATTCATTAAGCTGGGTGACCAGTaGTGGAAGTTGAAGGCCTTGCTCCCTGGACACAGG | + |
Preference number: 6 (lower is better) Translates to: DNESQFIKLGDQ*WKLKALLPGHR Trigger: CCTGTGTCCAGGGAGCAAGGCCTTCAACTTCCACCACTGGTCACCCAGCTTAATGAATTGACTCTCATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CAA 72 bp | TCCCAGCTACTGGTAAGACTGAGGAGGGAAGATTGCTaGAGACCAGGTCAAGGCTTCAGTGATCACATCCCT | + |
Preference number: 6 (lower is better) Translates to: SQLLVRLRREDC*RPGQGFSDHIP Trigger: AGGGATGTGATCACTGAAGCCTTGACCTGGTCTCAAGCAATCTTCCCTCCTCAGTCTTACCAGTAGCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CCA 72 bp | AATGAGAGTCAATTCATTAAGCTGGGTGACCAGTGGTaGAAGTTGAAGGCCTTGCTCCCTGGACACAGGTTG | + |
Preference number: 6 (lower is better) Translates to: NESQFIKLGDQW*KLKALLPGHRL Trigger: CAACCTGTGTCCAGGGAGCAAGGCCTTCAACTTCCACCACTGGTCACCCAGCTTAATGAATTGACTCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CAA 72 bp | GGACAACAGAGTCTGAAGGGCAAGGTGTGTTCCCATTaGGGGAACCCAGTTAAACCCTTTCCAAAAGAAGCC | + |
Preference number: 6 (lower is better) Translates to: GQQSLKGKVCSH*GNPVKPFPKEA Trigger: GGCTTCTTTTGGAAAGGGTTTAACTGGGTTCCCCAAATGGGAACACACCTTGCCCTTCAGACTCTGTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS GCA 72 bp | TTCTCTTCCAGCTCCAACTCCAGGAGCTATACAAGGTaGAGAATCGAAAAGCGTCATCTGTCTTCAGACAGC | + |
Preference number: 6 (lower is better) Translates to: FSSSSNSRSYTR*RIEKRHLSSDS Trigger: GCTGTCTGAAGACAGATGACGCTTTTCGATTCTGCACCTTGTATAGCTCCTGGAGTTGGAGCTGGAAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463527.5 ENST00000490672.2 |
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CDS CAA 90 bp | TTCTCTAATATTGAGTTAACTTCACATCAGAACTCCATAGTGAACTaGGTCCTGCTGCTTCTTCTGGTGGGAACAAGGACCGCCTCCCAG | + |
Preference number: 6 (lower is better) Translates to: FSNIELTSHQNSIVN*VLLLLLVGTRTASQ Trigger: CTGGGAGGCGGTCCTTGTTCCCACCAGAAGAAGCAGCAGGACCAAGTTCACTATGGAGTTCTGATGTGAAGTTAACTCAATATTAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CCA 72 bp | AGGTTGGAGGGCAGAGTGCTTGGATCTACTTCTTCATaGGGGCAGGAAAGGATTTTAGGTTACCTGGAATAT | + |
Preference number: 6 (lower is better) Translates to: RLEGRVLGSTSS*GQERILGYLEY Trigger: ATATTCCAGGTAACCTAAAATCCTTTCCTGCCCCCATGAAGAAGTAGATCCAAGCACTCTGCCCTCCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490672.2 |
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CDS CAA 72 bp | ATTGAGTTAACTTCACATCAGAACTCCATAGTGAACTaGGTCCTGCTGCTTCTTCTGGTGGGAACAAGGACC | + |
Preference number: 6 (lower is better) Translates to: IELTSHQNSIVN*VLLLLLVGTRT Trigger: GGTCCTTGTTCCCACCAGAAGAAGCAGCAGGACCAAGTTCACTATGGAGTTCTGATGTGAAGTTAACTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490672.2 |