Pregenerated sensors for KRTAP9-6 (Homo sapiens)
Ensembl gene IDs: ENSG00000212659Ensembl transcript IDs: ENST00000391355.1, ENST00000576511.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTGGATCACCTGAGGGCAGGAGTTCCAGACAAGTCTGATCAACATGGTGAAAACCCAGAAGATGGAGGTTaGAGCGAGCCGAGAGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: VDHLRAGVPDKSDQHGENPEDGG*SEPRAC Trigger: GCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGG...GTTTTCACCATGTTGATCAGACTTGTCTGGAACTCCTGCCCTCAGGTGATCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| 3UTR-3UTR CCA 90 bp | GTGGATCACCTGAGGGCAGGAGTTCCAGACAAGTCTGATCAACATGGTGAAAACCTTGAACCCAGAAGATaGAGGTTGCAGCGAGCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: VDHLRAGVPDKSDQHGENLEPRR*RLQRAE Trigger: CTCGGCTCGCTGCAACCTCCATCTTCTGGGTTCAAG...GTTTTCACCATGTTGATCAGACTTGTCTGGAACTCCTGCCCTCAGGTGATCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR GCA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCCCAGAAGATGGAGGTTaGAGCGAGCCGAGAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: NPEDGGCSEPRACYCTPAPEDGG*SEPRAC Trigger: GCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGG...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR GCA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCGTCACAATGGTGGGCTaGCAGCAGGTAGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPEDGGCSEPRACYCTPAVTMVG*QQVVLQ Trigger: CTGCAGGACTACCTGCTGGCAGCCCACCATTGTGAC...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR CCA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCCTTGAACCCAGAAGATaGAGGTTGCAGCGAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPEDGGCSEPRACYCTPALEPRR*RLQRAE Trigger: CTCGGCTCGCTGCAACCTCCATCTTCTGGGTTCAAG...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR GCA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCGGTCCTCTGTGGTGCTaGTCAGCAACAAGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPEDGGCSEPRACYCTPAGPLWC*SATRML Trigger: CAGCATTCTTGTTGCTGAGCAGCACCACAGAGGACC...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR TCA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCGGCAGGAGAATCACTTaGACCCAGAAGATGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NPEDGGCSEPRACYCTPAGRRIT*TQKMEV Trigger: AACCTCCATCTTCTGGGTTCAAGTGATTCTCCTGCC...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR TCA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCCTTCTGAAAGATAAGTaGGTTGGGTCTGGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPEDGGCSEPRACYCTPALLKDK*VGSGCG Trigger: ACCACACCCAGACCCAACTCACTTATCTTTCAGAAG...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR TCA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCAGTAAATCTGTCTTCTaGAAGATAAGTGAGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NPEDGGCSEPRACYCTPASKSVF*KISELG Trigger: ACCCAACTCACTTATCTTTCAGAAGACAGATTTACT...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR GCA 90 bp | GTGGATCACCTGAGGGCAGGAGTTCCAGACAAGTCTGATCAACATGGTGAAAACGGTCCTCTGTGGTGCTaGTCAGCAACAAGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDHLRAGVPDKSDQHGENGPLWC*SATRML Trigger: CAGCATTCTTGTTGCTGAGCAGCACCACAGAGGACC...GTTTTCACCATGTTGATCAGACTTGTCTGGAACTCCTGCCCTCAGGTGATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR TCA 90 bp | GTGGATCACCTGAGGGCAGGAGTTCCAGACAAGTCTGATCAACATGGTGAAAACGGCAGGAGAATCACTTaGACCCAGAAGATGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VDHLRAGVPDKSDQHGENGRRIT*TQKMEV Trigger: AACCTCCATCTTCTGGGTTCAAGTGATTCTCCTGCC...GTTTTCACCATGTTGATCAGACTTGTCTGGAACTCCTGCCCTCAGGTGATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR CAA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCCCCAGAAGATGGAGGTaGCAGCGAGCCGAGAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: NPEDGGCSEPRACYCTPAPRRWR*QRAESV Trigger: CACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGG...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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| CDS-3UTR CAA 90 bp | AACCCAGAAGATGGAGGTTGCAGCGAGCCGAGAGCGTGCTACTGCACTCCAGCCAGGCAGGAGAATCACTaGAACCCAGAAGATGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: NPEDGGCSEPRACYCTPARQENH*NPEDGG Trigger: ACCTCCATCTTCTGGGTTCAAGTGATTCTCCTGCCT...GGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391355.1 ENST00000576511.1 |
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