Pregenerated sensors for KRTAP8-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000183640Ensembl transcript IDs: ENST00000329621.6
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCAGGGGGAACCTGGAGATGTaGGGCTCAGCCTTCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HDKWEVKFPKMSQRTSARGNLEM*GSAFKG Trigger: TCCCTTGAAGGCTGAGCCCCACATCTCCAGGTTCCC...CCTGGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| 3UTR-3UTR CCA 90 bp | CATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCAGGGGACTCGAGGTAAGTTaGAAAGCAGTGTCTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: HDKWEVKFPKMSQRTSARGLEVS*KAVSLR Trigger: CCTCAGAGACACTGCTTTCCAACTTACCTCGAGTCC...CCTGGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCAGGTTGATGAGCAAATaGGGACTGAAGGAGTGGATA | + |
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Preference number: 2 (lower is better) Translates to: AHDKWEVKFPKMSQRTSARLMSK*GLKEWI Trigger: TATCCACTCCTTCAGTCCTCATTTGCTCATCAACCT...GGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| 3UTR-3UTR GCA 90 bp | CTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCATCAAGGGAGAGAAGATaGTACACCTCGGGGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: LMTSGRSNFRKCPREHQPSRERR*YTSGIS Trigger: TGAAATCCCCGAGGTGTAGCATCTTCTCTCCCTTGA...TGGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGATAGACATATCCATGACTTCATCACAAGTCATGAGTGTCATGGAAAATTCCCAGGGGAGGCAGCTTaGGGAAGCGTCTGCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: FDRHIHDFITSHECHGKFPGEAA*GSVCFF Trigger: GAAAAAGCAGACGCTTCCTCAAGCTGCCTCCCCTGG...GAATTTTCCATGACACTCATGACTTGTGATGAAGTCATGGATATGTCTATCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR GCA 90 bp | GCTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCGCGGGTAGCCATAGCTaGCCCAGTAGCATCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: AHDKWEVKFPKMSQRTSAAGSHS*PSSILG Trigger: TCCCAGGATGCTACTGGGGCAGCTATGGCTACCCGC...GGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR GCA 90 bp | GCTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCCTGGAGAGTAGGTGCTaGCATAGCCACAGCCAACGC | + |
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Preference number: 4 (lower is better) Translates to: AHDKWEVKFPKMSQRTSALESRC*HSHSQR Trigger: GCGTTGGCTGTGGCTATGGCAGCACCTACTCTCCAG...GGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR CCA 90 bp | CATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCAGGAGTTGTCGCAGAGCATaGTGTCGGGAGTGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HDKWEVKFPKMSQRTSARSCRRA*CREWRA Trigger: AGCCCTCCACTCCCGACACCATGCTCTGCGACAACT...CCTGGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR CCA 90 bp | GCTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCGAAGCCATAGCCCACTaGAGAGTAGGTGCTGCCATA | + |
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Preference number: 4 (lower is better) Translates to: AHDKWEVKFPKMSQRTSAEAIAH*RVGAAI Trigger: TATGGCAGCACCTACTCTCCAGTGGGCTATGGCTTC...GGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR GCA 90 bp | CATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCAGGTCAAGGGAGAGAAGATaGTACACCTCGGGGATTTCA | + |
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Preference number: 4 (lower is better) Translates to: HDKWEVKFPKMSQRTSARSRERR*YTSGIS Trigger: TGAAATCCCCGAGGTGTAGCATCTTCTCTCCCTTGA...CCTGGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR CCA 90 bp | GCTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCTCAGTAGAGAGCAAATaGCGAGTATCTCCTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: AHDKWEVKFPKMSQRTSASVESK*RVSPVA Trigger: GGCTACAGGAGATACTCGCCATTTGCTCTCTACTGA...GGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR TCA 90 bp | GCTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCTTCAAAAGTAGCTCATaGCAAGTGGGAGGTCAAATT | + |
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Preference number: 4 (lower is better) Translates to: AHDKWEVKFPKMSQRTSAFKSSS*QVGGQI Trigger: AATTTGACCTCCCACTTGTCATGAGCTACTTTTGAA...GGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR CCA 90 bp | CTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCAGTAGCTCATGACAAGTaGGAGGTCAAATTTCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: LMTSGRSNFRKCPREHQPVAHDK*EVKFPK Trigger: TTTCGGAAATTTGACCTCCCACTTGTCATGAGCTAC...TGGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR TCA 90 bp | GCTCATGACAAGTGGGAGGTCAAATTTCCGAAAATGTCCCAGAGAACATCAGCCCTTCATCACAAGTCATaGGTGTCATGGAAAATTCAA | + |
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Preference number: 4 (lower is better) Translates to: AHDKWEVKFPKMSQRTSALHHKS*VSWKIQ Trigger: TTGAATTTTCCATGACACTCATGACTTGTGATGAAG...GGCTGATGTTCTCTGGGACATTTTCGGAAATTTGACCTCCCACTTGTCATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS GCA 90 bp | TGCCATAGCCACAGCCAACGCTATATCCCAGCGGGTAGCCATAGCTaGCCCAGTAGCATCCTGGGAAGACAGCCCCGGGGAAGTTGTCGC | + |
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Preference number: 5 (lower is better) Translates to: CHSHSQRYIPAGSHS*PSSILGRQPRGSCR Trigger: GCGACAACTTCCCCGGGGCTGTCTTCCCAGGATGCTACTGGGGCAGCTATGGCTACCCGCTGGGATATAGCGTTGGCTGTGGCTATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS GCA 90 bp | CGTTGTAGCCATAGCCGAAGCCATAGCCCACTGGAGAGTAGGTGCTaGCATAGCCACAGCCAACGCTATATCCCAGCGGGTAGCCATAGC | + |
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Preference number: 5 (lower is better) Translates to: RCSHSRSHSPLESRC*HSHSQRYIPAGSHS Trigger: GCTATGGCTACCCGCTGGGATATAGCGTTGGCTGTGGCTATGGCAGCACCTACTCTCCAGTGGGCTATGGCTTCGGCTATGGCTACAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS CCA 90 bp | GAAAGCCCCACAGCCGTTGTAGCCATAGCCGAAGCCATAGCCCACTaGAGAGTAGGTGCTGCCATAGCCACAGCCAACGCTATATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ESPTAVVAIAEAIAH*RVGAAIATANAISQ Trigger: CTGGGATATAGCGTTGGCTGTGGCTATGGCAGCACCTACTCTCCAGTGGGCTATGGCTTCGGCTATGGCTACAACGGCTGTGGGGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS CCA 90 bp | AAGATGCTACACCTCGGGGATTTCAGCCAATCAGTAGAGAGCAAATaGCGAGTATCTCCTGTAGCCGAAAGCCCCACAGCCGTTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: KMLHLGDFSQSVESK*RVSPVAESPTAVVA Trigger: GGCTACAACGGCTGTGGGGCTTTCGGCTACAGGAGATACTCGCCATTTGCTCTCTACTGATTGGCTGAAATCCCCGAGGTGTAGCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR CAA 90 bp | TTTGATAGACATATCCATGACTTCATCACAAGTCATGAGTGTCATGGAAAATTCACAGCCCCGGGGAAGTaGTCGCAGAGCATGGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: FDRHIHDFITSHECHGKFTAPGK*SQSMVS Trigger: CGACACCATGCTCTGCGACAACTTCCCCGGGGCTGT...GAATTTTCCATGACACTCATGACTTGTGATGAAGTCATGGATATGTCTATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS-3UTR CAA 90 bp | TTTGATAGACATATCCATGACTTCATCACAAGTCATGAGTGTCATGGAAAATTCGCCAGGGGAGGCAGCTaGAGGAAGCGTCTGCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: FDRHIHDFITSHECHGKFARGGS*RKRLLF Trigger: AAAAAGCAGACGCTTCCTCAAGCTGCCTCCCCTGGC...GAATTTTCCATGACACTCATGACTTGTGATGAAGTCATGGATATGTCTATCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS GCA 72 bp | CACAGCCAACGCTATATCCCAGCGGGTAGCCATAGCTaGCCCAGTAGCATCCTGGGAAGACAGCCCCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: HSQRYIPAGSHS*PSSILGRQPRG Trigger: TCCCCGGGGCTGTCTTCCCAGGATGCTACTGGGGCAGCTATGGCTACCCGCTGGGATATAGCGTTGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS GCA 72 bp | CATAGCCGAAGCCATAGCCCACTGGAGAGTAGGTGCTaGCATAGCCACAGCCAACGCTATATCCCAGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: HSRSHSPLESRC*HSHSQRYIPAG Trigger: ACCCGCTGGGATATAGCGTTGGCTGTGGCTATGGCAGCACCTACTCTCCAGTGGGCTATGGCTTCGGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS GCA 72 bp | AGCCATAGCCGAAGCCATAGCCCACTGGAGAGTAGGTaGTGCCATAGCCACAGCCAACGCTATATCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SHSRSHSPLESR*CHSHSQRYIPA Trigger: CGCTGGGATATAGCGTTGGCTGTGGCTATGGCAGCACCTACTCTCCAGTGGGCTATGGCTTCGGCTATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS CCA 72 bp | ACAGCCGTTGTAGCCATAGCCGAAGCCATAGCCCACTaGAGAGTAGGTGCTGCCATAGCCACAGCCAACGCT | + |
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Preference number: 6 (lower is better) Translates to: TAVVAIAEAIAH*RVGAAIATANA Trigger: AGCGTTGGCTGTGGCTATGGCAGCACCTACTCTCCAGTGGGCTATGGCTTCGGCTATGGCTACAACGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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| CDS CCA 72 bp | CACCTCGGGGATTTCAGCCAATCAGTAGAGAGCAAATaGCGAGTATCTCCTGTAGCCGAAAGCCCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: HLGDFSQSVESK*RVSPVAESPTA Trigger: GGCTGTGGGGCTTTCGGCTACAGGAGATACTCGCCATTTGCTCTCTACTGATTGGCTGAAATCCCCGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329621.6 |
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