Pregenerated sensors for KRTAP5-7 (Homo sapiens)
Ensembl gene IDs: ENSG00000244411Ensembl transcript IDs: ENST00000398536.6
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGAGGCAACAGGCTGTGTAACAACAAAGACAATCAGAGTAAGTTaGTTACAAAAACTTCCCAAAGGAAGATGGCAGAGGCCTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: TEATGCVTTKTIRVS*LQKLPKGRWQRPGP Trigger: TGGTCCAGGCCTCTGCCATCTTCCTTTGGGAAGTTTTTGTAACCAACTTACTCTGATTGTCTTTGTTGTTACACAGCCTGTTGCCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCTGCTTCTGTGGCCCTGGCCTGAGGAACAGTCCTGTCTCCATCAGATCACAGCCAGGAAGGAGATaGGAGGCAGAGGAGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LFCFCGPGLRNSPVSIRSQPGRR*EAEETA Trigger: GGCTGTCTCCTCTGCCTCTCATCTCCTTCCTGGCTG...TGATCTGATGGAGACAGGACTGTTCCTCAGGCCAGGGCCACAGAAGCAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| 3UTR CAA 90 bp | TACAGAGGCAACAGGCTGTGTAACAACAAAGACAATCAGAGTAAGTaGGTTACAAAAACTTCCCAAAGGAAGATGGCAGAGGCCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: YRGNRLCNNKDNQSK*VTKTSQRKMAEAWT Trigger: GGTCCAGGCCTCTGCCATCTTCCTTTGGGAAGTTTTTGTAACCAACTTACTCTGATTGTCTTTGTTGTTACACAGCCTGTTGCCTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| 3UTR-3UTR CCA 90 bp | GCAACATCAGCATCAGACCCACGCAGTCCGAAACACAACAAGAACAAGAAAACATCTTATAGTGAGGAATaGACCCTGAGCAGTGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ATSASDPRSPKHNKNKKTSYSEE*TLSSGL Trigger: CAAACCACTGCTCAGGGTCCATTCCTCACTATAAGA...TGTTTTCTTGTTCTTGTTGTGTTTCGGACTGCGTGGGTCTGATGCTGATGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| 3UTR-3UTR CCA 90 bp | GCAACATCAGCATCAGACCCACGCAGTCCGAAACACAACAAGAACAAGAAAACAAAAGGCAGGCAGATATaGCTTCATCTTATAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATSASDPRSPKHNKNKKTKGRQI*LHLIVR Trigger: CCTCACTATAAGATGAAGCCATATCTGCCTGCCTTT...TGTTTTCTTGTTCTTGTTGTGTTTCGGACTGCGTGGGTCTGATGCTGATGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCCTGAGGAACAGTCCTGTCTCCATCAGATCAATAGCTGGAAAGACCTACAGCCGCAGTTGCAGTaGACTTGGGAAGAGAATTTG | + |
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Preference number: 3 (lower is better) Translates to: PWPEEQSCLHQINSWKDLQPQLQ*TWEENL Trigger: CAAATTCTCTTCCCAAGTCAACTGCAACTGCGGCTG...TAGGTCTTTCCAGCTATTGATCTGATGGAGACAGGACTGTTCCTCAGGCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| 3UTR-3UTR CAA 90 bp | GCAACATCAGCATCAGACCCACGCAGTCCGAAACACAACAAGAACAAGAAAACAACCCTGAGCAGTGGTTaGGGGCTCAACGATGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: ATSASDPRSPKHNKNKKTTLSSG*GLNDEG Trigger: TCCTTCATCGTTGAGCCCCAAACCACTGCTCAGGGT...TGTTTTCTTGTTCTTGTTGTGTTTCGGACTGCGTGGGTCTGATGCTGATGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| 3UTR-3UTR CAA 90 bp | GCAACATCAGCATCAGACCCACGCAGTCCGAAACACAACAAGAACAAGAAAACAACTTGGGAAGAGAATTaGTTAGGAGGGAATGGACAT | + |
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Preference number: 3 (lower is better) Translates to: ATSASDPRSPKHNKNKKTTWEEN*LGGNGH Trigger: ATGTCCATTCCCTCCTAACAAATTCTCTTCCCAAGT...TGTTTTCTTGTTCTTGTTGTGTTTCGGACTGCGTGGGTCTGATGCTGATGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CCA 90 bp | CTCTTCTGCTTCTGTGGCCCTGGCCTGAGGAACAGTCCTGTCTCCATCAGATCACTGCTTCTGTGGCCCTaGCCTGAGGAACAGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LFCFCGPGLRNSPVSIRSLLLWP*PEEQSC Trigger: ACAGGACTGTTCCTCAGGCCAGGGCCACAGAAGCAG...TGATCTGATGGAGACAGGACTGTTCCTCAGGCCAGGGCCACAGAAGCAGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR TCA 90 bp | TTACAAAAACTTCCCAAAGGAAGATGGCAGAGGCCTGGACCAGGGAAAGGAGGCGAAAGGAGGCAAGTCTaGACTCCCCAGAGTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LQKLPKGRWQRPGPGKGGERRQV*TPQSFQ Trigger: CTGAAAACTCTGGGGAGTTCAGACTTGCCTCCTTTC...GCCTCCTTTCCCTGGTCCAGGCCTCTGCCATCTTCCTTTGGGAAGTTTTTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CCA 90 bp | TTACAAAAACTTCCCAAAGGAAGATGGCAGAGGCCTGGACCAGGGAAAGGAGGCCATCAGATCAATAGCTaGAAAGACCTAGGAAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LQKLPKGRWQRPGPGKGGHQINS*KDLGRE Trigger: CTCTCTTCCTAGGTCTTTCCAGCTATTGATCTGATG...GCCTCCTTTCCCTGGTCCAGGCCTCTGCCATCTTCCTTTGGGAAGTTTTTGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTTACAGAGGCAACAGGCTGTGTAACAACAAAGACAATCAGAGTAAGCTTCCCAAAGGAAGATaGCAGAGGCCTGGACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VFIYRGNRLCNNKDNQSKLPKGR*QRPGPG Trigger: CCCTGGTCCAGGCCTCTGCCATCTTCCTTTGGGAAG...CTTACTCTGATTGTCTTTGTTGTTACACAGCCTGTTGCCTCTGTAAATAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTTACAGAGGCAACAGGCTGTGTAACAACAAAGACAATCAGAGTAAGTCTTATAGTGAGGAATaGACCCTGAGCAGTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: VFIYRGNRLCNNKDNQSKSYSEE*TLSSGL Trigger: CAAACCACTGCTCAGGGTCCATTCCTCACTATAAGA...CTTACTCTGATTGTCTTTGTTGTTACACAGCCTGTTGCCTCTGTAAATAAACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CAA 90 bp | TTACAAAAACTTCCCAAAGGAAGATGGCAGAGGCCTGGACCAGGGAAAGGAGGCACCCTGAGCAGTGGTTaGGGGCTCAACGATGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LQKLPKGRWQRPGPGKGGTLSSG*GLNDEG Trigger: TCCTTCATCGTTGAGCCCCAAACCACTGCTCAGGGT...GCCTCCTTTCCCTGGTCCAGGCCTCTGCCATCTTCCTTTGGGAAGTTTTTGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CAA 90 bp | TTACAAAAACTTCCCAAAGGAAGATGGCAGAGGCCTGGACCAGGGAAAGGAGGCACTTGGGAAGAGAATTaGTTAGGAGGGAATGGACAT | + |
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Preference number: 5 (lower is better) Translates to: LQKLPKGRWQRPGPGKGGTWEEN*LGGNGH Trigger: ATGTCCATTCCCTCCTAACAAATTCTCTTCCCAAGT...GCCTCCTTTCCCTGGTCCAGGCCTCTGCCATCTTCCTTTGGGAAGTTTTTGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CAA 90 bp | GCAACATCAGCATCAGACCCACGCAGTCCGAAACACAACAAGAACAAGAAAACACAGCCGCAGTTGCAGTaGACTTGGGAAGAGAATTTG | + |
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Preference number: 5 (lower is better) Translates to: ATSASDPRSPKHNKNKKTQPQLQ*TWEENL Trigger: CAAATTCTCTTCCCAAGTCAACTGCAACTGCGGCTG...TGTTTTCTTGTTCTTGTTGTGTTTCGGACTGCGTGGGTCTGATGCTGATGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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| CDS-3UTR CAA 90 bp | CTCTTCTGCTTCTGTGGCCCTGGCCTGAGGAACAGTCCTGTCTCCATCAGATCAGACAATCAGAGTAAGTaGGTTACAAAAACTTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LFCFCGPGLRNSPVSIRSDNQSK*VTKTSQ Trigger: TTGGGAAGTTTTTGTAACCAACTTACTCTGATTGTC...TGATCTGATGGAGACAGGACTGTTCCTCAGGCCAGGGCCACAGAAGCAGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398536.6 |
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