Pregenerated sensors for KRTAP4-6 (Homo sapiens)
Ensembl gene IDs: ENSG00000198090Ensembl transcript IDs: ENST00000345847.4
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAACACAGTTGGTGGGAATGGCCTCTTCTGAGTTGTTTATGAGATaGACAAGGTCTGCTTCTGTGAGGAGTGAGCTGAAGGGGAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: ETQLVGMASSELFMR*TRSASVRSELKGRR Trigger: TCTCCTCCCCTTCAGCTCACTCCTCACAGAAGCAGACCTTGTGCATCTCATAAACAACTCAGAAGAGGCCATTCCCACCAACTGTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR GCA 90 bp | CAGGGTGAAACAATCAGACTTTCAAATCTGAGAGTGAGACAACCTTaGCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QGETIRLSNLRVRQP*PELPCKNFHVWDRR Trigger: TCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGTTGTCTCACTCTCAGATTTGAAAGTCTGATTGTTTCACCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR-3UTR CCA 90 bp | ACAATCAGACTTTCAAATCTGAGAGTGAGACAACCTTGCCCCGAGTTACCCTGCTGGAAACACAGTTGGTaGGAATGGCCTCTTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TIRLSNLRVRQPCPELPCWKHSW*EWPLLS Trigger: ACTCAGAAGAGGCCATTCCCACCAACTGTGTTTCCA...GCAGGGTAACTCGGGGCAAGGTTGTCTCACTCTCAGATTTGAAAGTCTGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGGTATCTTCTGAGTTGTTTATaGGATGCACAAGGTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: CPELPCKNFHVWDRRTWYLLSCL*DAQGLL Trigger: AAGCAGACCTTGTGCATCTCATAAACAACTCAGAAG...ATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR-3UTR TCA 90 bp | GTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGGTATCCATAAATGGGAATGGCCTCTTCTaGGTTGTTTATGAGATGCAC | + |
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Preference number: 2 (lower is better) Translates to: VTLQEFPCLGQKNLVSINGNGLF*VVYEMH Trigger: GTGCATCTCATAAACAACTCAGAAGAGGCCATTCCC...ATTTATGGATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGGTATACACTTGGGTCAACATaGGGAACATATATTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: CPELPCKNFHVWDRRTWYTLGST*GTYILD Trigger: ATCTAGAATATATGTTCCCCATGTTGACCCAAGTGT...ATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR CAA 90 bp | AGTGAGACAACCTTGCCCCGAGTTACCCTGCAAGAATTTCCATGTTaGGGACAGAAGAACTTGGTATCCATAAATACAAATATAAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: SETTLPRVTLQEFPC*GQKNLVSINTNIRY Trigger: ATACCTTATATTTGTATTTATGGATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGTTGTCTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR TCA 72 bp | GTTTATGAGATGCACAAGGTCTGCTTCTGTGAGGAGTaGGCTGAAGGGGAGGAGATAGTTTCAGGCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: VYEMHKVCFCEE*AEGEEIVSGKE Trigger: CTCCTTGCCTGAAACTATCTCCTCCCCTTCAGCTCACTCCTCACAGAAGCAGACCTTGTGCATCTCATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR GCA 72 bp | TTGGTGGGAATGGCCTCTTCTGAGTTGTTTATGAGATaGACAAGGTCTGCTTCTGTGAGGAGTGAGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: LVGMASSELFMR*TRSASVRSELK Trigger: CTTCAGCTCACTCCTCACAGAAGCAGACCTTGTGCATCTCATAAACAACTCAGAAGAGGCCATTCCCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR TCA 72 bp | GGATATGGAAACACAGTTGGTGGGAATGGCCTCTTCTaGGTTGTTTATGAGATGCACAAGGTCTGCTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GYGNTVGGNGLF*VVYEMHKVCFC Trigger: ACAGAAGCAGACCTTGTGCATCTCATAAACAACTCAGAAGAGGCCATTCCCACCAACTGTGTTTCCATATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTGGGTCAACATGGGGAACATATATTCTAGATGTATAGCCAGGACATATATCGATATGGAAACACAGTaGGTGGGAATGGCCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: TWVNMGNIYSRCIARTYIDMETQ*VGMASS Trigger: AGAAGAGGCCATTCCCACCAACTGTGTTTCCATATC...GATATATGTCCTGGCTATACATCTAGAATATATGTTCCCCATGTTGACCCAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGAAATACAGGGTGAAACAATCAGACTTTCAAATCTGAGAGTGAGACAACCTATGGCCTCTTCTGAGTaGTTTATGAGATGCACAAGG | + |
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Preference number: 3 (lower is better) Translates to: KEIQGETIRLSNLRVRQPMASSE*FMRCTR Trigger: CCTTGTGCATCTCATAAACAACTCAGAAGAGGCCAT...AGGTTGTCTCACTCTCAGATTTGAAAGTCTGATTGTTTCACCCTGTATTTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR-3UTR CAA 90 bp | GTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGGTATCCATAAATTATCTAATTTCACACTaGGGTCAACATGGGGAACAT | + |
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Preference number: 3 (lower is better) Translates to: VTLQEFPCLGQKNLVSINYLISH*GQHGEH Trigger: ATGTTCCCCATGTTGACCCAAGTGTGAAATTAGATA...ATTTATGGATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR GCA 90 bp | GAGACAACCTTGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAGAGTGAGACAACCTTaGCCCGAGTTACCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ETTLPRVTLQEFPCLGQKRVRQP*PELPCK Trigger: CTTGCAGGGTAACTCGGGGCAAGGTTGTCTCACTCT...CTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGTTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR GCA 90 bp | CCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGGTATCCTGCCCCGAGTTACCCTaGAAGAATTTCCATGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PRVTLQEFPCLGQKNLVSCPELP*KNFHVW Trigger: CCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCA...GGATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CCA 90 bp | CCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGGTATCCTGGAAACACAGTTGGTaGGAATGGCCTCTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PRVTLQEFPCLGQKNLVSWKHSW*EWPLLS Trigger: ACTCAGAAGAGGCCATTCCCACCAACTGTGTTTCCA...GGATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR TCA 90 bp | AATCAGACTTTCAAATCTGAGAGTGAGACAACCTTGCCCCGAGTTACCCTGCAAGGGAATGGCCTCTTCTaGGTTGTTTATGAGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: NQTFKSESETTLPRVTLQGNGLF*VVYEMH Trigger: GTGCATCTCATAAACAACTCAGAAGAGGCCATTCCC...TTGCAGGGTAACTCGGGGCAAGGTTGTCTCACTCTCAGATTTGAAAGTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CCA 90 bp | GAAACACAGTTGGTGGGAATGGCCTCTTCTGAGTTGTTTATGAGATGCACAAGGCACAGTTGGTGGGAATaGCCTCTTCTGAGTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: ETQLVGMASSELFMRCTRHSWWE*PLLSCL Trigger: TAAACAACTCAGAAGAGGCCATTCCCACCAACTGTG...CCTTGTGCATCTCATAAACAACTCAGAAGAGGCCATTCCCACCAACTGTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR TCA 90 bp | AACCTTGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTCTTCTGAGTTGTTTATaGGATGCACAAGGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NLAPSYPARISMFGTEELLLSCL*DAQGLL Trigger: AAGCAGACCTTGTGCATCTCATAAACAACTCAGAAG...AAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CCA 90 bp | ACCTTGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGACACTTGGGTCAACATaGGGAACATATATTCTAGAT | + |
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Preference number: 4 (lower is better) Translates to: TLPRVTLQEFPCLGQKNLTLGST*GTYILD Trigger: ATCTAGAATATATGTTCCCCATGTTGACCCAAGTGT...CAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR CAA 72 bp | AACAATCAGACTTTCAAATCTGAGAGTGAGACAACCTaGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: NNQTFKSESETT*PRVTLQEFPCL Trigger: CAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGTTGTCTCACTCTCAGATTTGAAAGTCTGATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CCA 90 bp | CAGTTGGTGGGAATGGCCTCTTCTGAGTTGTTTATGAGATGCACAAGGTCTGCTAAGAATTTCCATGTTTaGGACAGAAGAACTTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: QLVGMASSELFMRCTRSAKNFHV*DRRTWY Trigger: ATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTT...AGCAGACCTTGTGCATCTCATAAACAACTCAGAAGAGGCCATTCCCACCAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CCA 90 bp | GAAACACAGTTGGTGGGAATGGCCTCTTCTGAGTTGTTTATGAGATGCACAAGGTCTATGCGACAAAAGTaGAGTTTTATTCAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ETQLVGMASSELFMRCTRSMRQK*SFIQKQ Trigger: CTGCTTCTGAATAAAACTCCACTTTTGTCGCATAGA...CCTTGTGCATCTCATAAACAACTCAGAAGAGGCCATTCCCACCAACTGTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| 3UTR CAA 72 bp | ACCTTGCCCCGAGTTACCCTGCAAGAATTTCCATGTTaGGGACAGAAGAACTTGGTATCCATAAATACAAAT | + |
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Preference number: 4 (lower is better) Translates to: TLPRVTLQEFPC*GQKNLVSINTN Trigger: ATTTGTATTTATGGATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR GCA 90 bp | GTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGGTATCCATAAATGAGTTGTTTATGAGATaGACAAGGTCTGCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VTLQEFPCLGQKNLVSINELFMR*TRSASV Trigger: CACAGAAGCAGACCTTGTGCATCTCATAAACAACTC...ATTTATGGATACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CAA 90 bp | AACCTTGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGAACTTGAGAGTGAGACAACCTaGCCCCGAGTTACCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: NLAPSYPARISMFGTEELESETT*PRVTLQ Trigger: TTGCAGGGTAACTCGGGGCAAGGTTGTCTCACTCTC...AAGTTCTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CAA 90 bp | GAGACAACCTTGCCCCGAGTTACCCTGCAAGAATTTCCATGTTTGGGACAGAAGATGGCCTCTTCTGAGTaGTTTATGAGATGCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: ETTLPRVTLQEFPCLGQKMASSE*FMRCTR Trigger: CCTTGTGCATCTCATAAACAACTCAGAAGAGGCCAT...CTTCTGTCCCAAACATGGAAATTCTTGCAGGGTAACTCGGGGCAAGGTTGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CAA 90 bp | AATCAGACTTTCAAATCTGAGAGTGAGACAACCTTGCCCCGAGTTACCCTGCAAGATATGGAAACACAGTaGGTGGGAATGGCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: NQTFKSESETTLPRVTLQDMETQ*VGMASS Trigger: AGAAGAGGCCATTCCCACCAACTGTGTTTCCATATC...TTGCAGGGTAACTCGGGGCAAGGTTGTCTCACTCTCAGATTTGAAAGTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CAA 90 bp | ACAATCAGACTTTCAAATCTGAGAGTGAGACAACCTTGCCCCGAGTTACCCTGCTATCTAATTTCACACTaGGGTCAACATGGGGAACAT | + |
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Preference number: 5 (lower is better) Translates to: TIRLSNLRVRQPCPELPCYLISH*GQHGEH Trigger: ATGTTCCCCATGTTGACCCAAGTGTGAAATTAGATA...GCAGGGTAACTCGGGGCAAGGTTGTCTCACTCTCAGATTTGAAAGTCTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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| CDS-3UTR CAA 90 bp | ACTTGGGTCAACATGGGGAACATATATTCTAGATGTATAGCCAGGACATATATCCAAGAATTTCCATGTTaGGGACAGAAGAACTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: TWVNMGNIYSRCIARTYIQEFPC*GQKNLV Trigger: TACCAAGTTCTTCTGTCCCAAACATGGAAATTCTTG...GATATATGTCCTGGCTATACATCTAGAATATATGTTCCCCATGTTGACCCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345847.4 |
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