Pregenerated sensors for KRTAP4-2 (Homo sapiens)
Ensembl gene IDs: ENSG00000244537Ensembl transcript IDs: ENST00000377726.3
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAAATTCAAACTTGTATTCATTTGGTAGAGGGTAGCAACATAGTGTTTGGTGAGCTGAGGTTGTCCAATTaGCCTTGCATGATTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: KIQTCIHLVEGSNIVFGELRLSN*PCMIQF Trigger: GAACTGAATCATGCAAGGCCAATTGGACAACCTCAG...CTCACCAAACACTATGTTGCTACCCTCTACCAAATGAATACAAGTTTGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| 3UTR-3UTR CAA 90 bp | AAAATTCAAACTTGTATTCATTTGGTAGAGGGTAGCAACATAGTGTTTGGTGAGACTGAGGTTGTCCAATaGGCCTTGCATGATTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: KIQTCIHLVEGSNIVFGETEVVQ*ALHDSV Trigger: AACTGAATCATGCAAGGCCAATTGGACAACCTCAGT...CTCACCAAACACTATGTTGCTACCCTCTACCAAATGAATACAAGTTTGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR TCA 90 bp | TTGGCCTTGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGTTAATGCAGGTGAGTATAGGTaGGGGCATCAGCAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LALHDSVHRWIISRMLVNAGEYR*GHQQQE Trigger: CTCTTGCTGCTGATGCCCTCACCTATACTCACCTGC...ATTAACCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCAAGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR TCA 90 bp | TTGGAACTGAGGTTGTCCAATTGGCCTTGCATGATTCAGTTCACAGGTGGATCACCAATTGGCCTTGCATaGTTCAGTTCACAGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LELRLSNWPCMIQFTGGSPIGLA*FSSQVD Trigger: ATCCACCTGTGAACTGAATCATGCAAGGCCAATTGG...TGATCCACCTGTGAACTGAATCATGCAAGGCCAATTGGACAACCTCAGTTCCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR TCA 90 bp | TCCAATTGGCCTTGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGCAACATAGTGTTTGGTaGGCATATTTGGAGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SNWPCMIQFTGGSYQECWQHSVW*AYLEAK Trigger: TTTGGCCTCCAAATATGCTCACCAAACACTATGTTG...CCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCAAGGCCAATTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CCA 90 bp | TTGGAACTGAGGTTGTCCAATTGGCCTTGCATGATTCAGTTCACAGGTGGATCATTTGGTGAGCATATTTaGAGGCCAAACTCAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: LELRLSNWPCMIQFTGGSFGEHI*RPNSIQ Trigger: TTGGATTGAGTTTGGCCTCCAAATATGCTCACCAAA...TGATCCACCTGTGAACTGAATCATGCAAGGCCAATTGGACAACCTCAGTTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR TCA 90 bp | TTGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGTTAATAAAGGCAGAATTGGTTGGAACTaGGGTTGTCCAATTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LHDSVHRWIISRMLVNKGRIGWN*GCPIGL Trigger: AAGGCCAATTGGACAACCTCAGTTCCAACCAATTCT...GCCTTTATTAACCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR GCA 90 bp | TTGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGTTAATAAAGGCTTGTCCAATTGGCCTTaGATGATTCAGTTCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: LHDSVHRWIISRMLVNKGLSNWP*MIQFTG Trigger: ACCTGTGAACTGAATCATGCAAGGCCAATTGGACAA...GCCTTTATTAACCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGTTAATAAAGGCAGGTGAGGATTCAGTTCACAGGTaGATCATATCAAGAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: IQFTGGSYQECWLIKAGEDSVHR*IISRML Trigger: CAGCATTCTTGATATGATCCACCTGTGAACTGAATC...CTCACCTGCCTTTATTAACCAGCATTCTTGATATGATCCACCTGTGAACTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CCA 90 bp | TTCACAGGTGGATCATATCAAGAATGCTGGTTAATAAAGGCAGGTGAGTATAGGTCATATCAAGAATGCTaGTTAATAAAGGCAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: FTGGSYQECWLIKAGEYRSYQEC*LIKAGE Trigger: CTCACCTGCCTTTATTAACCAGCATTCTTGATATGA...CCTATACTCACCTGCCTTTATTAACCAGCATTCTTGATATGATCCACCTGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR GCA 90 bp | TGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGTTAATAAAGGCAGGATCATATCAAGAATaGTGGTTAATAAAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CMIQFTGGSYQECWLIKAGSYQE*WLIKAG Trigger: ACCTGCCTTTATTAACCAGCATTCTTGATATGATCC...TGCCTTTATTAACCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CAA 90 bp | TTGGAACTGAGGTTGTCCAATTGGCCTTGCATGATTCAGTTCACAGGTGGATCATGGTTGGAACTGAGGTaGTCCAATTGGCCTTGCATG | + |
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Preference number: 5 (lower is better) Translates to: LELRLSNWPCMIQFTGGSWLELR*SNWPCM Trigger: CATGCAAGGCCAATTGGACAACCTCAGTTCCAACCA...TGATCCACCTGTGAACTGAATCATGCAAGGCCAATTGGACAACCTCAGTTCCAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CAA 90 bp | TTGGCCTTGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGTTAATGTTGTCCAATTGGCCTaGCATGATTCAGTTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: LALHDSVHRWIISRMLVNVVQLA*HDSVHR Trigger: CCTGTGAACTGAATCATGCAAGGCCAATTGGACAAC...ATTAACCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCAAGGCCAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CAA 90 bp | TCCAATTGGCCTTGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGCAATCCAAGAATTGGTaGGAACTGAGGTTGTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: SNWPCMIQFTGGSYQECWQSKNW*ELRLSN Trigger: ATTGGACAACCTCAGTTCCAACCAATTCTTGGATTG...CCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCAAGGCCAATTGGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CAA 90 bp | TTGGAACTGAGGTTGTCCAATTGGCCTTGCATGATTCAGTTCACAGGTGGATCACAAACTTGTATTCATTaGGTAGAGGGTAGCAACATA | + |
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Preference number: 5 (lower is better) Translates to: LELRLSNWPCMIQFTGGSQTCIH*VEGSNI Trigger: TATGTTGCTACCCTCTACCAAATGAATACAAGTTTG...TGATCCACCTGTGAACTGAATCATGCAAGGCCAATTGGACAACCTCAGTTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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| CDS-3UTR CAA 90 bp | TGCATGATTCAGTTCACAGGTGGATCATATCAAGAATGCTGGTTAATAAAGGCAACTGAGGTTGTCCAATaGGCCTTGCATGATTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: CMIQFTGGSYQECWLIKATEVVQ*ALHDSV Trigger: AACTGAATCATGCAAGGCCAATTGGACAACCTCAGT...TGCCTTTATTAACCAGCATTCTTGATATGATCCACCTGTGAACTGAATCATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377726.3 |
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