Pregenerated sensors for KRTAP4-12 (Homo sapiens)
Ensembl gene IDs: ENSG00000213416Ensembl transcript IDs: ENST00000394014.2, ENST00000571271.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATaGGAGCCTTCATCTGTAGGAAAGGACGTAATAAGGAAGTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: YGTQINSLEQSACLQ*EPSSVGKDVIRKWC Trigger: ACACCACTTCCTTATTACGTCCTTTCCTACAGATGAAGGCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR TCA 90 bp | ATTTCTAAGGATGAGGTTTGCTTATGGGACCCAGATCAATTCTCTTaGACAGTCCGCATGTTTGCAATGAGAGCCTTCATCTGTAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: ISKDEVCLWDPDQFS*TVRMFAMRAFICRK Trigger: TTTCCTACAGATGAAGGCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR CCA 90 bp | AAGGTACAAAAATGTTTGCAAAAGACTTTAAGAGAGAGACTTCACTaGACTTCAAGGTTGGAGGCTTTAAGATCTGTGGCCCTACAAATG | + |
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Preference number: 1 (lower is better) Translates to: KVQKCLQKTLRERLH*TSRLEALRSVALQM Trigger: CATTTGTAGGGCCACAGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAAACATTTTTGTACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR CCA 90 bp | GGCATGATGAATAAATGTCCTGAAGTCAAAGAGGTGGGAGGATGTTaGAGGACAATTTGTCAATTTATTAGGAGATTGTCAATGAATTCC | + |
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Preference number: 1 (lower is better) Translates to: GMMNKCPEVKEVGGC*RTICQFIRRLSMNS Trigger: GGAATTCATTGACAATCTCCTAATAAATTGACAAATTGTCCTCCAACATCCTCCCACCTCTTTGACTTCAGGACATTTATTCATCATGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGATCTGTGGCCCTTCCGCATGTTTGCAATaGGAGCCTTCATCTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: KRETSLDFKVGGFKICGPSACLQ*EPSSVG Trigger: TCCTACAGATGAAGGCTCTCATTGCAAACATGCGGA...AGGGCCACAGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR GCA 90 bp | TGGACTTCAAGGTTGGAGGCTTTAAGATCTGTGGCCCTACAAATGATGGAGGCATCTAAGGATGAGGTTTaGTTATGGGACCCAGATCAA | + |
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Preference number: 2 (lower is better) Translates to: WTSRLEALRSVALQMMEASKDEV*LWDPDQ Trigger: TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGA...TGCCTCCATCATTTGTAGGGCCACAGATCTTAAAGCCTCCAACCTTGAAGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGATCTGTGGCCCTGAGGTGGGAGGATGTTaGAGGACAATTTGTCAATTT | + |
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Preference number: 2 (lower is better) Translates to: KRETSLDFKVGGFKICGPEVGGC*RTICQF Trigger: AAATTGACAAATTGTCCTCCAACATCCTCCCACCTC...AGGGCCACAGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTTTAAGATCTGTGGCCCTACAAATGATGGAGGCAATCTTCAAATTCCTTCTGAAGTCAAAGAGGTaGGAGGATGTTGGAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: EALRSVALQMMEAIFKFLLKSKR*EDVGGQ Trigger: TTGTCCTCCAACATCCTCCCACCTCTTTGACTTCAG...AAGGAATTTGAAGATTGCCTCCATCATTTGTAGGGCCACAGATCTTAAAGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGGAGGCTTTAAGATCTGTGGCCCTACAAATGATGGAGGCAATCTTCAAATCTAAGGATGAGGTTTaGTTATGGGACCCAGATCAA | + |
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Preference number: 2 (lower is better) Translates to: RLEALRSVALQMMEAIFKSKDEV*LWDPDQ Trigger: TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGA...TTTGAAGATTGCCTCCATCATTTGTAGGGCCACAGATCTTAAAGCCTCCAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CCA 90 bp | TTAGGCATGATGAATAAATGTCCTGAAGTCAAAGAGGTGGGAGGATGTTGGAGGGATGAGGTTTGCTTATaGGACCCAGATCAATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LGMMNKCPEVKEVGGCWRDEVCL*DPDQFS Trigger: AGAGAATTGATCTGGGTCCCATAAGCAAACCTCATC...CCTCCAACATCCTCCCACCTCTTTGACTTCAGGACATTTATTCATCATGCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR TCA 90 bp | GTAGAATGCAAATACAGAATTTCTAAGGATGAGGTTTGCTTATGGGACCCAGATTCCGCATGTTTGCAATaGGAGCCTTCATCTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: VECKYRISKDEVCLWDPDSACLQ*EPSSVG Trigger: TCCTACAGATGAAGGCTCTCATTGCAAACATGCGGA...ATCTGGGTCCCATAAGCAAACCTCATCCTTAGAAATTCTGTATTTGCATTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR TCA 90 bp | TTGCAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTACCAGATCAATTCTCTTaGACAGTCCGCATGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LQKTLRERLHWTSRLEALPDQFS*TVRMFA Trigger: TGCAAACATGCGGACTGTTCAAGAGAATTGATCTGG...TAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR TCA 90 bp | AAATGTTTGCAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGCCAGATCAATTCTCTTaGACAGTCCGCATGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: KCLQKTLRERLHWTSRLEPDQFS*TVRMFA Trigger: TGCAAACATGCGGACTGTTCAAGAGAATTGATCTGG...CTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAAACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGAGATGAGGTTTGCTTATaGGACCCAGATCAATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QKTLRERLHWTSRLEALRDEVCL*DPDQFS Trigger: AGAGAATTGATCTGGGTCCCATAAGCAAACCTCATC...TCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CCA 90 bp | AAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGATCTGTCAATGAATTCCTTTaGAAGGAAGGGAGTTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: KTLRERLHWTSRLEALRSVNEFL*KEGSLD Trigger: GTCCAAACTCCCTTCCTTCCAAAGGAATTCATTGAC...AGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CCA 90 bp | GAATGCAAATACAGAATTTCTAAGGATGAGGTTTGCTTATGGGACCCAGATCAAGACGTAATAAGGAAGTaGTGTGTTCACAGCAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ECKYRISKDEVCLWDPDQDVIRK*CVHSRD Trigger: ATCTCTGCTGTGAACACACCACTTCCTTATTACGTC...TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGAAATTCTGTATTTGCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CAA 90 bp | TCAAGGTTGGAGGCTTTAAGATCTGTGGCCCTACAAATGATGGAGGCAATCTTCCCCAGATCAATTCTCTaGAACAGTCCGCATGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: SRLEALRSVALQMMEAIFPRSIL*NSPHVC Trigger: GCAAACATGCGGACTGTTCAAGAGAATTGATCTGGG...GAAGATTGCCTCCATCATTTGTAGGGCCACAGATCTTAAAGCCTCCAACCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR TCA 72 bp | GATGAGGTTTGCTTATGGGACCCAGATCAATTCTCTTaGACAGTCCGCATGTTTGCAATGAGAGCCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: DEVCLWDPDQFS*TVRMFAMRAFI Trigger: GATGAAGGCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCATAAGCAAACCTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGAAGAGGTGGGAGGATGTaGGAGGACAATTTGTCAATT | + |
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Preference number: 3 (lower is better) Translates to: QKTLRERLHWTSRLEALRRGGRM*EDNLSI Trigger: AATTGACAAATTGTCCTCCAACATCCTCCCACCTCT...TCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| 3UTR CCA 72 bp | AAATGTTTGCAAAAGACTTTAAGAGAGAGACTTCACTaGACTTCAAGGTTGGAGGCTTTAAGATCTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: KCLQKTLRERLH*TSRLEALRSVA Trigger: GGCCACAGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAAACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | CTTATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATGAGAGCCTGAAGTCAAAGAGGTaGGAGGATGTTGGAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: LMGPRSILLNSPHVCNESLKSKR*EDVGGQ Trigger: TTGTCCTCCAACATCCTCCCACCTCTTTGACTTCAG...GCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | ATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATGAGAGCCTTAGAGAGAGACTTCACTaGACTTCAAGGTTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: MGPRSILLNSPHVCNESLRERLH*TSRLEA Trigger: AGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCT...AAGGCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR TCA 90 bp | ATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATGAGAGCCTTCTGTGGCCCTACAAATaGTGGAGGCAATCTTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: MGPRSILLNSPHVCNESLLWPYK*WRQSSN Trigger: ATTTGAAGATTGCCTCCATCATTTGTAGGGCCACAG...AAGGCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | AAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGATCTGTGGCCCTGACGTAATAAGGAAGTaGTGTGTTCACAGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: KRETSLDFKVGGFKICGPDVIRK*CVHSRD Trigger: ATCTCTGCTGTGAACACACCACTTCCTTATTACGTC...AGGGCCACAGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR GCA 90 bp | TTAGGCATGATGAATAAATGTCCTGAAGTCAAAGAGGTGGGAGGATGTTGGAGGAACAGTCCGCATGTTTaGAATGAGAGCCTTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LGMMNKCPEVKEVGGCWRNSPHV*NESLHL Trigger: CAGATGAAGGCTCTCATTGCAAACATGCGGACTGTT...CCTCCAACATCCTCCCACCTCTTTGACTTCAGGACATTTATTCATCATGCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR GCA 90 bp | CTTATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATGAGAGCTCTAAGGATGAGGTTTaGTTATGGGACCCAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: LMGPRSILLNSPHVCNESSKDEV*LWDPDQ Trigger: TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGA...GCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | ATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATGAGAGCCTTGACGTAATAAGGAAGTaGTGTGTTCACAGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: MGPRSILLNSPHVCNESLDVIRK*CVHSRD Trigger: ATCTCTGCTGTGAACACACCACTTCCTTATTACGTC...AAGGCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | ATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATGAGAGCCTTGAGGTGGGAGGATGTTaGAGGACAATTTGTCAATTT | + |
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Preference number: 4 (lower is better) Translates to: MGPRSILLNSPHVCNESLEVGGC*RTICQF Trigger: AAATTGACAAATTGTCCTCCAACATCCTCCCACCTC...AAGGCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR TCA 90 bp | CAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGATCCGCATGTTTGCAATaGGAGCCTTCATCTGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKTLRERLHWTSRLEALRSACLQ*EPSSVG Trigger: TCCTACAGATGAAGGCTCTCATTGCAAACATGCGGA...TCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR GCA 90 bp | TTAGGCATGATGAATAAATGTCCTGAAGTCAAAGAGGTGGGAGGATGTTGGAGGTCTAAGGATGAGGTTTaGTTATGGGACCCAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: LGMMNKCPEVKEVGGCWRSKDEV*LWDPDQ Trigger: TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGA...CCTCCAACATCCTCCCACCTCTTTGACTTCAGGACATTTATTCATCATGCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | TTGCAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTACTGAAGTCAAAGAGGTaGGAGGATGTTGGAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: LQKTLRERLHWTSRLEALLKSKR*EDVGGQ Trigger: TTGTCCTCCAACATCCTCCCACCTCTTTGACTTCAG...TAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR TCA 90 bp | GAATGCAAATACAGAATTTCTAAGGATGAGGTTTGCTTATGGGACCCAGATCAATCCGCATGTTTGCAATaGGAGCCTTCATCTGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: ECKYRISKDEVCLWDPDQSACLQ*EPSSVG Trigger: TCCTACAGATGAAGGCTCTCATTGCAAACATGCGGA...TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGAAATTCTGTATTTGCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR TCA 90 bp | CAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGACCAGATCAATTCTCTTaGACAGTCCGCATGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: QKTLRERLHWTSRLEALRPDQFS*TVRMFA Trigger: TGCAAACATGCGGACTGTTCAAGAGAATTGATCTGG...TCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTAAGATCTGTGGCCCTACAAATGATGGAGGCAATCTTCAAATTCCTTGATGAGGTTTGCTTATaGGACCCAGATCAATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: EALRSVALQMMEAIFKFLDEVCL*DPDQFS Trigger: AGAGAATTGATCTGGGTCCCATAAGCAAACCTCATC...AAGGAATTTGAAGATTGCCTCCATCATTTGTAGGGCCACAGATCTTAAAGCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTGCAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCGTCAATGAATTCCTTTaGAAGGAAGGGAGTTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: MFAKDFKRETSLDFKVGGVNEFL*KEGSLD Trigger: GTCCAAACTCCCTTCCTTCCAAAGGAATTCATTGAC...GCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | AAATGTTTGCAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGAGAGAGAGACTTCACTaGACTTCAAGGTTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KCLQKTLRERLHWTSRLERERLH*TSRLEA Trigger: AGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCT...CTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAAACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR GCA 90 bp | GAATGCAAATACAGAATTTCTAAGGATGAGGTTTGCTTATGGGACCCAGATCAAAACAGTCCGCATGTTTaGAATGAGAGCCTTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: ECKYRISKDEVCLWDPDQNSPHV*NESLHL Trigger: CAGATGAAGGCTCTCATTGCAAACATGCGGACTGTT...TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGAAATTCTGTATTTGCATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CCA 90 bp | AAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGATCTGAGGTGGGAGGATGTTaGAGGACAATTTGTCAATTT | + |
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Preference number: 4 (lower is better) Translates to: KTLRERLHWTSRLEALRSEVGGC*RTICQF Trigger: AAATTGACAAATTGTCCTCCAACATCCTCCCACCTC...AGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR TCA 90 bp | ACAAAAATGTTTGCAAAAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTCCAGATCAATTCTCTTaGACAGTCCGCATGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: TKMFAKDFKRETSLDFKVPDQFS*TVRMFA Trigger: TGCAAACATGCGGACTGTTCAAGAGAATTGATCTGG...AACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTTTTGCAAACATTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CAA 90 bp | ACTTCAAGGTTGGAGGCTTTAAGATCTGTGGCCCTACAAATGATGGAGGCAATCAGAGGTGGGAGGATGTaGGAGGACAATTTGTCAATT | + |
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Preference number: 5 (lower is better) Translates to: TSRLEALRSVALQMMEAIRGGRM*EDNLSI Trigger: AATTGACAAATTGTCCTCCAACATCCTCCCACCTCT...GATTGCCTCCATCATTTGTAGGGCCACAGATCTTAAAGCCTCCAACCTTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CAA 90 bp | CTTATGGGACCCAGATCAATTCTCTTGAACAGTCCGCATGTTTGCAATGAGAGCAGAGGTGGGAGGATGTaGGAGGACAATTTGTCAATT | + |
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Preference number: 5 (lower is better) Translates to: LMGPRSILLNSPHVCNESRGGRM*EDNLSI Trigger: AATTGACAAATTGTCCTCCAACATCCTCCCACCTCT...GCTCTCATTGCAAACATGCGGACTGTTCAAGAGAATTGATCTGGGTCCCATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CAA 90 bp | TTAGGCATGATGAATAAATGTCCTGAAGTCAAAGAGGTGGGAGGATGTTGGAGGCACTGGACTTCAAGGTaGGAGGCTTTAAGATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LGMMNKCPEVKEVGGCWRHWTSR*EALRSV Trigger: CACAGATCTTAAAGCCTCCAACCTTGAAGTCCAGTG...CCTCCAACATCCTCCCACCTCTTTGACTTCAGGACATTTATTCATCATGCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CAA 90 bp | AAGACTTTAAGAGAGAGACTTCACTGGACTTCAAGGTTGGAGGCTTTAAGATCTCCCAGATCAATTCTCTaGAACAGTCCGCATGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: KTLRERLHWTSRLEALRSPRSIL*NSPHVC Trigger: GCAAACATGCGGACTGTTCAAGAGAATTGATCTGGG...AGATCTTAAAGCCTCCAACCTTGAAGTCCAGTGAAGTCTCTCTCTTAAAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS-3UTR CAA 90 bp | GAATGCAAATACAGAATTTCTAAGGATGAGGTTTGCTTATGGGACCCAGATCAACACTGGACTTCAAGGTaGGAGGCTTTAAGATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ECKYRISKDEVCLWDPDQHWTSR*EALRSV Trigger: CACAGATCTTAAAGCCTCCAACCTTGAAGTCCAGTG...TTGATCTGGGTCCCATAAGCAAACCTCATCCTTAGAAATTCTGTATTTGCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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| CDS CCA 72 bp | GAGCCTTCATCTGTAGGAAAGGACGTAATAAGGAAGTaGTGTGTTCACAGCAGAGATTTAGCAGCAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: EPSSVGKDVIRK*CVHSRDLAARG Trigger: TCCTCTTGCTGCTAAATCTCTGCTGTGAACACACCACTTCCTTATTACGTCCTTTCCTACAGATGAAGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394014.2 ENST00000571271.1 |
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