Pregenerated sensors for KRTAP3-3 (Homo sapiens)

Ensembl gene IDs: ENSG00000212899

Ensembl transcript IDs: ENST00000391586.3, ENST00000572132.2

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	GGTGATTGTGGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTCTAAAGCTTCTATGTTaGCTTTTTCAATCTCAGGCA	+
Preference number: 2 (lower is better) Translates to: GDCGSTILVPISKAEYISLKLLC*LFQSQA Trigger: TGCCTGAGATTGAAAAAGTCAACATAGAAGCTTTAG...ACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGGTACTACCACAATCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
3UTR-3UTR TCA 90 bp	CCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACTGAGATACTAAAGCTTCTATGTTaGCTTTTTCAATCTCAGGCA	+
Preference number: 2 (lower is better) Translates to: PSLFQFLKQSTLVVGTEILKLLC*LFQSQA Trigger: TGCCTGAGATTGAAAAAGTCAACATAGAAGCTTTAG...TATCTCAGTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
3UTR-3UTR CAA 90 bp	AGGAATCGAACAGCTTCAGGAAGCTATAGGCATCCACTGATTCAAACTGCAGTTGTGGTAGTACCATCCTaGTTCCAATTTCTAAAGCAG	+
Preference number: 3 (lower is better) Translates to: RNRTASGSYRHPLIQTAVVVVPS*FQFLKQ Trigger: CTGCTTTAGAAATTGGAACAAGGATGGTACTACCAC...AACTGCAGTTTGAATCAGTGGATGCCTATAGCTTCCTGAAGCTGTTCGATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
3UTR-3UTR CAA 90 bp	AGGAATCGAACAGCTTCAGGAAGCTATAGGCATCCACTGATTCAAACTGCAGTTGCTAAAGCTTCTATGTaGACTTTTTCAATCTCAGGC	+
Preference number: 3 (lower is better) Translates to: RNRTASGSYRHPLIQTAVAKASM*TFSISG Trigger: GCCTGAGATTGAAAAAGTCAACATAGAAGCTTTAGC...AACTGCAGTTTGAATCAGTGGATGCCTATAGCTTCCTGAAGCTGTTCGATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
3UTR-3UTR CAA 90 bp	AGGAATCGAACAGCTTCAGGAAGCTATAGGCATCCACTGATTCAAACTGCAGTTATAGCTGAATGGTCATaGAAAGTTTCTTGGTCTCTT	+
Preference number: 3 (lower is better) Translates to: RNRTASGSYRHPLIQTAVIAEWS*KVSWSL Trigger: AAGAGACCAAGAAACTTTCAATGACCATTCAGCTAT...AACTGCAGTTTGAATCAGTGGATGCCTATAGCTTCCTGAAGCTGTTCGATTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
3UTR-3UTR CAA 90 bp	TTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACTGAGATAGGTGAAGCTAAAGCTTCTATGTaGACTTTTTCAATCTCAGGC	+
Preference number: 3 (lower is better) Translates to: LFQFLKQSTLVVGTEIGEAKASM*TFSISG Trigger: GCCTGAGATTGAAAAAGTCAACATAGAAGCTTTAGC...TTCACCTATCTCAGTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	AGGAATCGAACAGCTTCAGGAAGCTATAGGCATCCACTGATTCAAACTGCAGTTGATACCACCCAAGACTaGAAACAGAATTCCCAAACC	+
Preference number: 4 (lower is better) Translates to: RNRTASGSYRHPLIQTAVDTTQD*KQNSQT Trigger: GGTTTGGGAATTCTGTTTTCAGTCTTGGGTGGTATC...AACTGCAGTTTGAATCAGTGGATGCCTATAGCTTCCTGAAGCTGTTCGATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	TTTTTGCAGGGGGTGATTGTGGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGGCTATAGGCATCCACTaGTTCAAACTGCAGTTGGTT	+
Preference number: 4 (lower is better) Translates to: FLQGVIVVVPSLFQFLKQAIGIH*FKLQLV Trigger: AACCAACTGCAGTTTGAATCAGTGGATGCCTATAGC...CTGCTTTAGAAATTGGAACAAGGATGGTACTACCACAATCACCCCCTGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	TTTTTGCAGGGGGTGATTGTGGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGGATACCACCCAAGACTaGAAACAGAATTCCCAAACC	+
Preference number: 4 (lower is better) Translates to: FLQGVIVVVPSLFQFLKQDTTQD*KQNSQT Trigger: GGTTTGGGAATTCTGTTTTCAGTCTTGGGTGGTATC...CTGCTTTAGAAATTGGAACAAGGATGGTACTACCACAATCACCCCCTGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CCA 90 bp	TTTTTGCAGGGGGTGATTGTGGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGAGGCACAGCAATCCATaGCTATTAGAGTCTGTGGTA	+
Preference number: 4 (lower is better) Translates to: FLQGVIVVVPSLFQFLKQRHSNP*LLESVV Trigger: TACCACAGACTCTAATAGCCATGGATTGCTGTGCCT...CTGCTTTAGAAATTGGAACAAGGATGGTACTACCACAATCACCCCCTGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	AGGAATCGAACAGCTTCAGGAAGCTATAGGCATCCACTGATTCAAACTGCAGTTGCAGTTGGTTATAGCTaGATGGTCATTGAAAGTTTC	+
Preference number: 4 (lower is better) Translates to: RNRTASGSYRHPLIQTAVAVGYS*MVIESF Trigger: GAAACTTTCAATGACCATTCAGCTATAACCAACTGC...AACTGCAGTTTGAATCAGTGGATGCCTATAGCTTCCTGAAGCTGTTCGATTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	AGGAATCGAACAGCTTCAGGAAGCTATAGGCATCCACTGATTCAAACTGCAGTTCTAAAGCTTCTATGTTaGCTTTTTCAATCTCAGGCA	+
Preference number: 4 (lower is better) Translates to: RNRTASGSYRHPLIQTAVLKLLC*LFQSQA Trigger: TGCCTGAGATTGAAAAAGTCAACATAGAAGCTTTAG...AACTGCAGTTTGAATCAGTGGATGCCTATAGCTTCCTGAAGCTGTTCGATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	GGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACGCTATAGGCATCCACTaGTTCAAACTGCAGTTGGTT	+
Preference number: 4 (lower is better) Translates to: GSTILVPISKAEYISCRYAIGIH*FKLQLV Trigger: AACCAACTGCAGTTTGAATCAGTGGATGCCTATAGC...GTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGGTACTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CCA 90 bp	TTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACTGAGATAGGTGAAAGGCACAGCAATCCATaGCTATTAGAGTCTGTGGTA	+
Preference number: 4 (lower is better) Translates to: LFQFLKQSTLVVGTEIGERHSNP*LLESVV Trigger: TACCACAGACTCTAATAGCCATGGATTGCTGTGCCT...TTCACCTATCTCAGTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	GGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACCTAAAGCTTCTATGTTaGCTTTTTCAATCTCAGGCA	+
Preference number: 4 (lower is better) Translates to: GSTILVPISKAEYISCRYLKLLC*LFQSQA Trigger: TGCCTGAGATTGAAAAAGTCAACATAGAAGCTTTAG...GTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGGTACTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	GGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACAGAGACACTTTAATATaGAGGAATCGAACAGCTTCA	+
Preference number: 4 (lower is better) Translates to: GSTILVPISKAEYISCRYRDTLI*RNRTAS Trigger: TGAAGCTGTTCGATTCCTTCATATTAAAGTGTCTCT...GTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGGTACTACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR TCA 90 bp	CCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACTGAGATAAGAGACACTTTAATATaGAGGAATCGAACAGCTTCA	+
Preference number: 4 (lower is better) Translates to: PSLFQFLKQSTLVVGTEIRDTLI*RNRTAS Trigger: TGAAGCTGTTCGATTCCTTCATATTAAAGTGTCTCT...TATCTCAGTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CCA 90 bp	GGTGATTGTGGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTTGGTTATAGCTGAATaGTCATTGAAAGTTTCTTGG	+
Preference number: 4 (lower is better) Translates to: GDCGSTILVPISKAEYISLVIAE*SLKVSW Trigger: CCAAGAAACTTTCAATGACCATTCAGCTATAACCAA...ACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGGTACTACCACAATCACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CCA 90 bp	CCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACTGAGATATTGGTTATAGCTGAATaGTCATTGAAAGTTTCTTGG	+
Preference number: 4 (lower is better) Translates to: PSLFQFLKQSTLVVGTEILVIAE*SLKVSW Trigger: CCAAGAAACTTTCAATGACCATTCAGCTATAACCAA...TATCTCAGTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CAA 90 bp	TTTTTGCAGGGGGTGATTGTGGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGGTGGTAGTACCATCCTaGTTCCAATTTCTAAAGCAG	+
Preference number: 5 (lower is better) Translates to: FLQGVIVVVPSLFQFLKQVVVPS*FQFLKQ Trigger: CTGCTTTAGAAATTGGAACAAGGATGGTACTACCAC...CTGCTTTAGAAATTGGAACAAGGATGGTACTACCACAATCACCCCCTGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CAA 90 bp	TTTTTGCAGGGGGTGATTGTGGTAGTACCATCCTTGTTCCAATTTCTAAAGCAGGCTAAAGCTTCTATGTaGACTTTTTCAATCTCAGGC	+
Preference number: 5 (lower is better) Translates to: FLQGVIVVVPSLFQFLKQAKASM*TFSISG Trigger: GCCTGAGATTGAAAAAGTCAACATAGAAGCTTTAGC...CTGCTTTAGAAATTGGAACAAGGATGGTACTACCACAATCACCCCCTGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CAA 90 bp	TTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACTGAGATAGGTGAAGTGGTAGTACCATCCTaGTTCCAATTTCTAAAGCAG	+
Preference number: 5 (lower is better) Translates to: LFQFLKQSTLVVGTEIGEVVVPS*FQFLKQ Trigger: CTGCTTTAGAAATTGGAACAAGGATGGTACTACCAC...TTCACCTATCTCAGTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2
CDS-3UTR CAA 90 bp	CCATCCTTGTTCCAATTTCTAAAGCAGAGTACATTAGTTGTAGGTACTGAGATAATAGCTGAATGGTCATaGAAAGTTTCTTGGTCTCTT	+
Preference number: 5 (lower is better) Translates to: PSLFQFLKQSTLVVGTEIIAEWS*KVSWSL Trigger: AAGAGACCAAGAAACTTTCAATGACCATTCAGCTAT...TATCTCAGTACCTACAACTAATGTACTCTGCTTTAGAAATTGGAACAAGGATGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391586.3 ENST00000572132.2