Pregenerated sensors for KRTAP3-2 (Homo sapiens)
Ensembl gene IDs: ENSG00000212900Ensembl transcript IDs: ENST00000391587.3, ENST00000575409.2
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGTCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTaGAGGGACAGCTTCTGGATTCTTCGTTGTCGGGCACTGAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LVYLNIWQTTEASEY*RDSFWILRCRALSK Trigger: TTTGCTCAGTGCCCGACAACGAAGAATCCAGAAGCTGTCCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGTCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTGAAGGGCTTCTGGATTCTTCGTaGTCGGGCACTGAGCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: IWSTLTSGKLLRQVNTEGLLDSS*SGTEQS Trigger: ACTTTGCTCAGTGCCCGACAACGAAGAATCCAGAAG...CCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| 3UTR TCA 72 bp | CTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTaGAGGGACAGCTTCTGGATTCTTCGTTGTCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LNIWQTTEASEY*RDSFWILRCRA Trigger: TGCCCGACAACGAAGAATCCAGAAGCTGTCCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR TCA 90 bp | ATCTGGGTCATCTGGTCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATGAGGCAAGTGAATACTaGAGGGACAGCTTCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: IWVIWSTLTSGKLLRQVNEASEY*RDSFWI Trigger: AATCCAGAAGCTGTCCCTTCAGTATTCACTTGCCTC...ATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAGATGACCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR TCA 90 bp | GTCATCTGGTCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTGAAGAGGCAAGTGAATACTaGAGGGACAGCTTCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VIWSTLTSGKLLRQVNTEEASEY*RDSFWI Trigger: AATCCAGAAGCTGTCCCTTCAGTATTCACTTGCCTC...TTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAGATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR CCA 90 bp | ACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTGAAGGGACAGCTTCTATGGCAATGGGCGTCTaGTTAGCTTTCAGTTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: TLTSGKLLRQVNTEGTASMAMGV*LAFSFL Trigger: TAAGAAACTGAAAGCTAACCAGACGCCCATTGCCAT...AGAAGCTGTCCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR CCA 90 bp | ATCTGGTCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTGAAGGGATGGCAATGGGCGTCTaGTTAGCTTTCAGTTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: IWSTLTSGKLLRQVNTEGMAMGV*LAFSFL Trigger: TAAGAAACTGAAAGCTAACCAGACGCCCATTGCCAT...CCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR TCA 90 bp | TCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTGAAGGGACAGCTAGCCAGGAAGCAATATaGTCAAGAACATGTAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLTSGKLLRQVNTEGTASQEAI*SRTCNL Trigger: CAGATTACATGTTCTTGATCATATTGCTTCCTGGCT...AGCTGTCCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR TCA 90 bp | ATCTGGTCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTGAAGGGAGCCAGGAAGCAATATaGTCAAGAACATGTAATCTG | + |
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Preference number: 4 (lower is better) Translates to: IWSTLTSGKLLRQVNTEGSQEAI*SRTCNL Trigger: CAGATTACATGTTCTTGATCATATTGCTTCCTGGCT...CCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR CAA 90 bp | ACATCTGGCAAACTACTGAGGCAAGTGAATACTGAAGGGACAGCTTCTGGATTCCTTCTGGATTCTTCGTaGTCGGGCACTGAGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TSGKLLRQVNTEGTASGFLLDSS*SGTEQS Trigger: ACTTTGCTCAGTGCCCGACAACGAAGAATCCAGAAG...GAATCCAGAAGCTGTCCCTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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| CDS-3UTR CAA 90 bp | GTCATCTGGTCTACCTTAACATCTGGCAAACTACTGAGGCAAGTGAATACTGAACTTCTGGATTCTTCGTaGTCGGGCACTGAGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: VIWSTLTSGKLLRQVNTELLDSS*SGTEQS Trigger: ACTTTGCTCAGTGCCCGACAACGAAGAATCCAGAAG...TTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391587.3 ENST00000575409.2 |
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