Pregenerated sensors for KRTAP22-1 (Homo sapiens)

Ensembl gene IDs: ENSG00000186924

Ensembl transcript IDs: ENST00000334680.3

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AATTTCTCAGAAGCAGCCAGAAAACCAAGATCTTTCATAACACCATaGGCAGTAGCAGGCATAGCCATAGCCGCTAAGACCACAGCCATA	+
Preference number: 5 (lower is better) Translates to: NFSEAARKPRSFITP*AVAGIAIAAKTTAI Trigger: TATGGCTGTGGTCTTAGCGGCTATGGCTATGCCTGCTACTGCCCATGGTGTTATGAAAGATCTTGGTTTTCTGGCTGCTTCTGAGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334680.3
CDS CCA 72 bp	GAAGCAGCCAGAAAACCAAGATCTTTCATAACACCATaGGCAGTAGCAGGCATAGCCATAGCCGCTAAGACC	+
Preference number: 6 (lower is better) Translates to: EAARKPRSFITP*AVAGIAIAAKT Trigger: GGTCTTAGCGGCTATGGCTATGCCTGCTACTGCCCATGGTGTTATGAAAGATCTTGGTTTTCTGGCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334680.3

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu