Pregenerated sensors for KRTAP20-2 (Homo sapiens)
Ensembl gene IDs: ENSG00000184032Ensembl transcript IDs: ENST00000330798.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGAATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGTCTTCCATAGCAAGATaGGCGGCAGCAGCCATATCC | + |
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Preference number: 4 (lower is better) Translates to: RIMKANLGSPCGRDHEVESSIAR*AAAAIS Trigger: GGATATGGCTGCTGCCGCCCATCTTGCTATGGAAGA...CTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR TCA 90 bp | AGAATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGAGTGGAGGATTTGGTTaGGGAGCAAGGAATCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: RIMKANLGSPCGRDHEVESGGFG*GARNQF Trigger: AAACTGATTCCTTGCTCCTCAACCAAATCCTCCACT...CTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR TCA 90 bp | AGAATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGAAGAGACCACGAGGTTaGGTTGCCAGATATTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RIMKANLGSPCGRDHEVEKRPRG*VARYFS Trigger: TGAGAAATATCTGGCAACTCAACCTCGTGGTCTCTT...CTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR CCA 90 bp | AGAATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGCAAGAGTGGAGGATTTaGTTGAGGAGCAAGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RIMKANLGSPCGRDHEVEQEWRI*LRSKES Trigger: TGATTCCTTGCTCCTCAACCAAATCCTCCACTCTTG...CTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR CCA 90 bp | AGAATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGACATGGTTTCAAGAGTaGAGGATTTGGTTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIMKANLGSPCGRDHEVETWFQE*RIWLRS Trigger: GCTCCTCAACCAAATCCTCCACTCTTGAAACCATGT...CTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR GCA 90 bp | ATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGTTGACCACGAGGTTGAGTTaGCAGATATTTCTCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IMKANLGSPCGRDHEVELTTRLS*QIFLSR Trigger: TCTACTGAGAAATATCTGGCAACTCAACCTCGTGGT...CAACTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR CCA 90 bp | ATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGTTGTGCTGTAGTAGCACATaGTTTCAAGAGTGGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: IMKANLGSPCGRDHEVELCCSST*FQEWRI Trigger: AATCCTCCACTCTTGAAACCATGTGCTACTACAGCA...CAACTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS TCA 90 bp | TATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTaGGTTGCCAGATATTTCTCAGTAGAAGCCACAGGACCAGTATCT | + |
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Preference number: 5 (lower is better) Translates to: YEGKFRKSMWKRPRG*VARYFSVEATGPVS Trigger: AGATACTGGTCCTGTGGCTTCTACTGAGAAATATCTGGCAACTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR CAA 90 bp | ATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGTTGTCAAGAGTGGAGGATTaGGTTGAGGAGCAAGGAATC | + |
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Preference number: 5 (lower is better) Translates to: IMKANLGSPCGRDHEVELSRVED*VEEQGI Trigger: GATTCCTTGCTCCTCAACCAAATCCTCCACTCTTGA...CAACTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS-3UTR CAA 90 bp | AGAATTATGAAGGCAAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTGAGGAAGAGACCACGAGGTaGAGTTGCCAGATATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RIMKANLGSPCGRDHEVEEETTR*SCQIFL Trigger: GAGAAATATCTGGCAACTCAACCTCGTGGTCTCTTC...CTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTTGCCTTCATAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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| CDS TCA 72 bp | AAATTTAGGAAGTCCATGTGGAAGAGACCACGAGGTTaGGTTGCCAGATATTTCTCAGTAGAAGCCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: KFRKSMWKRPRG*VARYFSVEATG Trigger: TCCTGTGGCTTCTACTGAGAAATATCTGGCAACTCAACCTCGTGGTCTCTTCCACATGGACTTCCTAAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330798.3 |
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