Pregenerated sensors for KRTAP20-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000244624Ensembl transcript IDs: ENST00000334664.3
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGATCAGATGAACAAGAGCAGCATGAGAATCCAGGTTTCACAAGCAGACAAATCAGCAGACAAATCTGGTaGGCTCTAGAATTGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSDEQEQHENPGFTSRQISRQIW*ALELFS Trigger: ACTGAACAATTCTAGAGCTCACCAGATTTGTCTGCT...GATTTGTCTGCTTGTGAAACCTGGATTCTCATGCTGCTCTTGTTCATCTGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334664.3 |
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| CDS-3UTR CCA 90 bp | GATCAGATGAACAAGAGCAGCATGAGAATCCAGGTTTCACAAGCAGACAAATCTTCTTCCATAGCAAGATaGGCAGTAGTAGCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DQMNKSSMRIQVSQADKSSSIAR*AVVAIS Trigger: GGAAATGGCTACTACTGCCCATCTTGCTATGGAAGA...AGATTTGTCTGCTTGTGAAACCTGGATTCTCATGCTGCTCTTGTTCATCTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334664.3 |
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| CDS-3UTR CCA 90 bp | ATGAACAAGAGCAGCATGAGAATCCAGGTTTCACAAGCAGACAAATCTGGTGAGTGCTGTAGTAAATCATaGTGTCAGAAATGGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MNKSSMRIQVSQADKSGECCSKS*CQKWMV Trigger: AACCATCCATTTCTGACACCATGATTTACTACAGCA...CTCACCAGATTTGTCTGCTTGTGAAACCTGGATTCTCATGCTGCTCTTGTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334664.3 |
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| CDS-3UTR GCA 90 bp | GATCAGATGAACAAGAGCAGCATGAGAATCCAGGTTTCACAAGCAGACAAATCTAGCCACCATAATAGTTaGTGTAGTAAATCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: DQMNKSSMRIQVSQADKSSHHNS*CSKSWC Trigger: ACACCATGATTTACTACAGCAACTATTATGGTGGCT...AGATTTGTCTGCTTGTGAAACCTGGATTCTCATGCTGCTCTTGTTCATCTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334664.3 |
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| CDS TCA 90 bp | CAAGAGCAGCATGAGAATCCAGGTTTCACAAGCAGACAAATCTGGTaGGCTCTAGAATTGTTCAGTAGAAACCATATGACCAATATCTTC | + |
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Preference number: 5 (lower is better) Translates to: QEQHENPGFTSRQIW*ALELFSRNHMTNIF Trigger: GAAGATATTGGTCATATGGTTTCTACTGAACAATTCTAGAGCTCACCAGATTTGTCTGCTTGTGAAACCTGGATTCTCATGCTGCTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334664.3 |
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| CDS TCA 72 bp | CATGAGAATCCAGGTTTCACAAGCAGACAAATCTGGTaGGCTCTAGAATTGTTCAGTAGAAACCATATGACC | + |
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Preference number: 6 (lower is better) Translates to: HENPGFTSRQIW*ALELFSRNHMT Trigger: GGTCATATGGTTTCTACTGAACAATTCTAGAGCTCACCAGATTTGTCTGCTTGTGAAACCTGGATTCTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334664.3 |
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