Pregenerated sensors for KRTAP2-3 (Homo sapiens)
Ensembl gene IDs: ENSG00000212724Ensembl transcript IDs: ENST00000391418.3, ENST00000570303.2
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GATGTTATTGTTGAATTCGTGCTTGAGGATCAGCTAGGCTGCAAAGGTGGAGTCAGGGGTAGAAGAGTCTaGACAAGCTTCTGTGCACCT | + |
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Preference number: 2 (lower is better) Translates to: DVIVEFVLEDQLGCKGGVRGRRV*TSFCAP Trigger: AGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCT...GACTCCACCTTTGCAGCCTAGCTGATCCTCAAGCACGAATTCAACAATAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGGAATTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTCCTGGGAATGTTTCGTaGGTTGAGAGGAGAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KLEFFSRLSERARISCIIPGNVS*VERRGG Trigger: CCCACCTCTCCTCTCAACGCACGAAACATTCCCAGG...AATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAATTCCAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGGAATTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTCTGCACAAGCTTCTGTaGACCTGGGAATGTTTCGTG | + |
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Preference number: 2 (lower is better) Translates to: KLEFFSRLSERARISCIILHKLL*TWECFV Trigger: CACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAG...AATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAATTCCAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| 3UTR GCA 72 bp | GTTATTGTTGAATTCGTGCTTGAGGATCAGCTAGGCTaGAAAGGTGGAGTCTCTCATCTGATCCAGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: VIVEFVLEDQLG*KGGVSHLIQKG Trigger: CCCCTTCTGGATCAGATGAGAGACTCCACCTTTGCAGCCTAGCTGATCCTCAAGCACGAATTCAACAATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTGGAATTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTGATAGGATGTTATTGTaGAATTCGTGCTTGAGGATC | + |
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Preference number: 3 (lower is better) Translates to: KLEFFSRLSERARISCIIDRMLL*NSCLRI Trigger: GATCCTCAAGCACGAATTCAACAATAACATCCTATC...AATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAATTCCAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR TCA 90 bp | GAAGGGGTAGAAGAGTCTGCACAAGCTTCTGTGCACCTGGGAATGTTTCGTGCGGAATGTTTCGTGCGTTaGGAGGAGAGGTGGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: EGVEESAQASVHLGMFRAECFVR*EERWGL Trigger: GAGACCCCACCTCTCCTCTCAACGCACGAAACATTC...CGCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGGTAGAAGAGTCTGCACAAGCTTCTGTGCACCTGGGAATGTTTCGTGCGCCTGGGAATGTTTCGTaGGTTGAGAGGAGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EGVEESAQASVHLGMFRAPGNVS*VERRGG Trigger: CCCACCTCTCCTCTCAACGCACGAAACATTCCCAGG...CGCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGCAAAGGTGGAGTCTCTCATCTGATCCAGAAGGGGTAGAAGAGTCTGCACCTGGGAATGTTTCGTaGGTTGAGAGGAGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RLQRWSLSSDPEGVEESAPGNVS*VERRGG Trigger: CCCACCTCTCCTCTCAACGCACGAAACATTCCCAGG...TGCAGACTCTTCTACCCCTTCTGGATCAGATGAGAGACTCCACCTTTGCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGGTAGAAGAGTCTGCACAAGCTTCTGTGCACCTGGGAATGTTTCGTGCGGAGGATCAGCTAGGCTaGAAAGGTGGAGTCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: EGVEESAQASVHLGMFRAEDQLG*KGGVSH Trigger: ATGAGAGACTCCACCTTTGCAGCCTAGCTGATCCTC...CGCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGCAAAGGTGGAGTCTCTCATCTGATCCAGAAGGGGTAGAAGAGTCTGCAGTGGAGTCTCTCATCTaGTCCAGAAGGGGTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RLQRWSLSSDPEGVEESAVESLI*SRRGRR Trigger: TCTTCTACCCCTTCTGGATCAGATGAGAGACTCCAC...TGCAGACTCTTCTACCCCTTCTGGATCAGATGAGAGACTCCACCTTTGCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGGTAGAAGAGTCTGCACAAGCTTCTGTGCACCTGGGAATGTTTCGTGCCTGCACAAGCTTCTGTaGACCTGGGAATGTTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: RRGRRVCTSFCAPGNVSCLHKLL*TWECFV Trigger: CACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAG...GCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | CTGCAAAGGTGGAGTCTCTCATCTGATCCAGAAGGGGTAGAAGAGTCTGCACAACTGCACAAGCTTCTGTaGACCTGGGAATGTTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: LQRWSLSSDPEGVEESAQLHKLL*TWECFV Trigger: CACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAG...TTGTGCAGACTCTTCTACCCCTTCTGGATCAGATGAGAGACTCCACCTTTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTATGTGGGGAGAATGTTTCGTGCGTTaGGAGGAGAGGTGGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FFSRLSERARISCIIMWGECFVR*EERWGL Trigger: GAGACCCCACCTCTCCTCTCAACGCACGAAACATTC...TCCCCACATAATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR TCA 90 bp | GATGTTATTGTTGAATTCGTGCTTGAGGATCAGCTAGGCTGCAAAGGTGGAGTCGTGGAGTCTCTCATCTaGTCCAGAAGGGGTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DVIVEFVLEDQLGCKGGVVESLI*SRRGRR Trigger: TCTTCTACCCCTTCTGGATCAGATGAGAGACTCCAC...GACTCCACCTTTGCAGCCTAGCTGATCCTCAAGCACGAATTCAACAATAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGGTAGAAGAGTCTGCACAAGCTTCTGTGCACCTGGGAATGTTTCGTGCAGGGCCAGGATTAGCTaGATAATTATGTGGGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RRGRRVCTSFCAPGNVSCRARIS*IIMWGN Trigger: ATTTCCCCACATAATTATGCAGCTAATCCTGGCCCT...GCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CCA 90 bp | GATGTTATTGTTGAATTCGTGCTTGAGGATCAGCTAGGCTGCAAAGGTGGAGTCGCTAGGCTGCAAAGGTaGAGTCTCTCATCTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: DVIVEFVLEDQLGCKGGVARLQR*SLSSDP Trigger: TGGATCAGATGAGAGACTCCACCTTTGCAGCCTAGC...GACTCCACCTTTGCAGCCTAGCTGATCCTCAAGCACGAATTCAACAATAACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | CTGCAAAGGTGGAGTCTCTCATCTGATCCAGAAGGGGTAGAAGAGTCTGCACAAAGGGCCAGGATTAGCTaGATAATTATGTGGGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: LQRWSLSSDPEGVEESAQRARIS*IIMWGN Trigger: ATTTCCCCACATAATTATGCAGCTAATCCTGGCCCT...TTGTGCAGACTCTTCTACCCCTTCTGGATCAGATGAGAGACTCCACCTTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTATGTGGGGAAGGGGTAGAAGAGTCTaGACAAGCTTCTGTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: FFSRLSERARISCIIMWGRGRRV*TSFCAP Trigger: AGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCT...TCCCCACATAATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTATGTGGGGAGAGGATCAGCTAGGCTaGAAAGGTGGAGTCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FFSRLSERARISCIIMWGEDQLG*KGGVSH Trigger: ATGAGAGACTCCACCTTTGCAGCCTAGCTGATCCTC...TCCCCACATAATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTATGTGGGGAGCTAGGCTGCAAAGGTaGAGTCTCTCATCTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: FFSRLSERARISCIIMWGARLQR*SLSSDP Trigger: TGGATCAGATGAGAGACTCCACCTTTGCAGCCTAGC...TCCCCACATAATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CCA 90 bp | GATGTTATTGTTGAATTCGTGCTTGAGGATCAGCTAGGCTGCAAAGGTGGAGTCAGGGTGATGAGTCAGTaGGACAGAGTTCTATTCAAG | + |
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Preference number: 4 (lower is better) Translates to: DVIVEFVLEDQLGCKGGVRVMSQ*DRVLFK Trigger: CTTGAATAGAACTCTGTCCCACTGACTCATCACCCT...GACTCCACCTTTGCAGCCTAGCTGATCCTCAAGCACGAATTCAACAATAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTATGTGGGGAAGGGTGATGAGTCAGTaGGACAGAGTTCTATTCAAG | + |
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Preference number: 4 (lower is better) Translates to: FFSRLSERARISCIIMWGRVMSQ*DRVLFK Trigger: CTTGAATAGAACTCTGTCCCACTGACTCATCACCCT...TCCCCACATAATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAGAAGAGTCTGCACAAGCTTCTGTGCACCTGGGAATGTTTCGTGCGGAATGTTTCGTGCGTaGAGAGGAGAGGTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RRGRRVCTSFCAPGNVSCGMFRA*RGEVGS Trigger: AGACCCCACCTCTCCTCTCAACGCACGAAACATTCC...GCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CAA 90 bp | CTGCAAAGGTGGAGTCTCTCATCTGATCCAGAAGGGGTAGAAGAGTCTGCACAAGGAATGTTTCGTGCGTaGAGAGGAGAGGTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LQRWSLSSDPEGVEESAQGMFRA*RGEVGS Trigger: AGACCCCACCTCTCCTCTCAACGCACGAAACATTCC...TTGTGCAGACTCTTCTACCCCTTCTGGATCAGATGAGAGACTCCACCTTTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGGTAGAAGAGTCTGCACAAGCTTCTGTGCACCTGGGAATGTTTCGTGCGATAGATAGGATGTTATaGTTGAATTCGTGCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: EGVEESAQASVHLGMFRAIDRML*LNSCLR Trigger: CCTCAAGCACGAATTCAACAATAACATCCTATCTAT...CGCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTCTACCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTCAAGATTGTCAGAGAGGGCCAGGATTAGCTGCATAATTATGTGGGGAGATAGGATGTTATTGTaGAATTCGTGCTTGAGGATC | + |
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Preference number: 5 (lower is better) Translates to: FFSRLSERARISCIIMWGDRMLL*NSCLRI Trigger: GATCCTCAAGCACGAATTCAACAATAACATCCTATC...TCCCCACATAATTATGCAGCTAATCCTGGCCCTCTCTGACAATCTTGAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391418.3 ENST00000570303.2 |
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